Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g19150 FvH4_4g19150 FvH4_4g19150 FvH4_4g19150 FvH4_4g19150 FvH4_4g19150 FvH4_4g19150 |
| prunus_persica | Prupe.4G109500_v2.0.a1 Prupe.4G109500_v2.0.a1 Prupe.4G109500_v2.0.a1 Prupe.4G109600_v2.0.a1 Prupe.4G109900_v2.0.a1 Prupe.4G263700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0424091 RchiOBHm_Chr5g0019831 RchiOBHm_Chr5g0020211 RchiOBHm_Chr5g0020221 |
| rosa_laevigata | RLG00000007504 |
| rosa_multiflora | Rmu_co8478429.1_g000001 Rmu_sc0002260.1_g000052 Rmu_sc0002260.1_g000058 Rmu_sc0002260.1_g000060 |
| rosa_roxburghii | Rroxscaffold_5G00366100 |
| rosa_rugosa | Rorug04G0192900 Rorug04G0193000 Rorug04G0193100 Rorug04G0193100 Rorug04G0193100 Rorug07G0254600 |
| rosa_samantha | Rh4AG251200 Rh4BG256200 Rh4BG256300 Rh4CG266700 Rh4DG250800 Rh4DG250900 Rh5AG148300 Rh5AG366200 Rh5AG366300 Rh5CG159200 |
| rosa_wichuraiana | Rw4G021640 Rw5G013110 Rw5G013120 Rw5G034340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 4482 |
| AccB1I | GGYRCC | 2 cut(s) | 699, 1602 |
| AccBSI | CCGCTC | 1 cut(s) | 2401 |
| AccI | GTMKAC | 1 cut(s) | 1998 |
| AccII | CGCG | 2 cut(s) | 179, 1913 |
| AclI | AACGTT | 2 cut(s) | 1407, 2499 |
| AclWI | GGATC | 5 cut(s) | 185, 198, 803, 1462, 4083 |
| AcuI | CTGAAG | 3 cut(s) | 122, 2790, 4227 |
| AcvI | CACGTG | 1 cut(s) | 1294 |
| AcyI | GRCGYC | 1 cut(s) | 4479 |
| AdeI | CACNNNGTG | 1 cut(s) | 1294 |
| AflII | CTTAAG | 2 cut(s) | 1090, 2018 |
| AflIII | ACRYGT | 3 cut(s) | 960, 2775, 3985 |
| AjiI | CACGTC | 2 cut(s) | 2776, 4339 |
| AjnI | CCWGG | 5 cut(s) | 1504, 1676, 1971, 2820, 3327 |
| Alw21I | GWGCWC | 2 cut(s) | 2125, 2986 |
| AlwI | GGATC | 5 cut(s) | 185, 198, 803, 1462, 4083 |
| Ama87I | CYCGRG | 2 cut(s) | 1865, 3278 |
| AoxI | GGCC | 4 cut(s) | 73, 392, 1635, 2174 |
| ApeKI | GCWGC | 5 cut(s) | 98, 266, 1055, 2286, 4091 |
| AseI | ATTAAT | 2 cut(s) | 1707, 2649 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 21, 2262, 2940, 3473, 4416 |
| AspLEI | GCGC | 2 cut(s) | 132, 2897 |
| AspS9I | GGNCC | 5 cut(s) | 90, 393, 866, 1266, 2175 |
| AsuC2I | CCSGG | 2 cut(s) | 2283, 4334 |
| AsuII | TTCGAA | 2 cut(s) | 328, 1414 |
| AvaI | CYCGRG | 2 cut(s) | 1865, 3278 |
| AvaII | GGWCC | 3 cut(s) | 90, 866, 1266 |
| AxyI | CCTNAGG | 3 cut(s) | 29, 1155, 2430 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1657, 1690, 3242, 3275 |
| BamHI | GGATCC | 1 cut(s) | 190 |
| BanI | GGYRCC | 2 cut(s) | 699, 1602 |
| BanII | GRGCYC | 1 cut(s) | 488 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1311, 1343 |
| BbrPI | CACGTG | 1 cut(s) | 1294 |
| BbsI | GAAGAC | 7 cut(s) | 729, 2444, 2603, 2778, 3678, 3971, 4040 |
| Bbv12I | GWGCWC | 2 cut(s) | 2125, 2986 |
| BbvCI | CCTCAGC | 1 cut(s) | 257 |
| BbvI | GCAGC | 5 cut(s) | 110, 278, 1067, 2298, 4078 |
| BccI | CCATC | 6 cut(s) | 375, 449, 591, 811, 1377, 3166 |
| BceAI | ACGGC | 4 cut(s) | 60, 2199, 2274, 3792 |
| BciT130I | CCWGG | 5 cut(s) | 1506, 1678, 1973, 2822, 3329 |
| BciVI | GTATCC | 1 cut(s) | 3601 |
| BclI | TGATCA | 5 cut(s) | 2217, 2538, 3234, 3633, 4374 |
| BcnI | CCSGG | 2 cut(s) | 2283, 4334 |
| BfmI | CTRYAG | 4 cut(s) | 1802, 2095, 2447, 3587 |
| BfrI | CTTAAG | 2 cut(s) | 1090, 2018 |
| BfuI | GTATCC | 1 cut(s) | 3601 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2360, 3776 |
| BglII | AGATCT | 1 cut(s) | 1383 |
| BisI | GCNGC | 6 cut(s) | 99, 267, 1056, 1059, 2287, 4092 |
| BlsI | GCNGC | 6 cut(s) | 100, 268, 1057, 1060, 2288, 4093 |
| BmcAI | AGTACT | 2 cut(s) | 757, 1501 |
| Bme1390I | CCNGG | 7 cut(s) | 1506, 1678, 1973, 2283, 2822, 3329, 4334 |
| Bme18I | GGWCC | 3 cut(s) | 90, 866, 1266 |
| BmeT110I | CYCGRG | 2 cut(s) | 1865, 3278 |
| BmgBI | CACGTC | 2 cut(s) | 2776, 4339 |
| BmgT120I | GGNCC | 5 cut(s) | 90, 393, 866, 1266, 2175 |
| BmiI | GGNNCC | 6 cut(s) | 192, 354, 701, 1604, 2085, 2209 |
| BmrFI | CCNGG | 7 cut(s) | 1506, 1678, 1973, 2283, 2822, 3329, 4334 |
| BoxI | GACNNNNGTC | 1 cut(s) | 4040 |
| BpiI | GAAGAC | 7 cut(s) | 729, 2444, 2603, 2778, 3678, 3971, 4040 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 472, 504, 3660, 3692, 4097, 4129 |
| BpmI | CTGGAG | 1 cut(s) | 2102 |
| Bpu10I | CCTNAGC | 1 cut(s) | 257 |
| Bpu14I | TTCGAA | 2 cut(s) | 328, 1414 |
| BpuEI | CTTGAG | 7 cut(s) | 359, 1616, 1859, 2342, 2933, 3668, 4409 |
| BpuMI | CCSGG | 2 cut(s) | 2283, 4334 |
| Bsa29I | ATCGAT | 4 cut(s) | 1466, 2583, 3629, 3891 |
| BsaAI | YACGTR | 2 cut(s) | 961, 1294 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2537, 3233, 4304 |
| BsaHI | GRCGYC | 1 cut(s) | 4479 |
| BsaI | GGTCTC | 5 cut(s) | 187, 1154, 1865, 2389, 3281 |
| BsaJI | CCNNGG | 9 cut(s) | 186, 238, 1224, 1262, 1505, 1638, 1971, 2820, 4332 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1134, 1164, 1718, 1748 |
| Bse118I | RCCGGY | 2 cut(s) | 1552, 2897 |
| Bse21I | CCTNAGG | 3 cut(s) | 29, 1155, 2430 |
| Bse3DI | GCAATG | 2 cut(s) | 754, 2418 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2537, 3233, 4304 |
| BseBI | CCWGG | 5 cut(s) | 1506, 1678, 1973, 2822, 3329 |
| BseCI | ATCGAT | 4 cut(s) | 1466, 2583, 3629, 3891 |
| BseDI | CCNNGG | 9 cut(s) | 186, 238, 1224, 1262, 1505, 1638, 1971, 2820, 4332 |
| BseJI | GATNNNNATC | 3 cut(s) | 2537, 3233, 4304 |
| BseMI | GCAATG | 2 cut(s) | 754, 2418 |
| BseRI | GAGGAG | 8 cut(s) | 1085, 1739, 1802, 2418, 2525, 3143, 3221, 3296 |
| BseXI | GCAGC | 5 cut(s) | 110, 278, 1067, 2298, 4078 |
| BseYI | CCCAGC | 1 cut(s) | 2271 |
| Bsh1236I | CGCG | 2 cut(s) | 179, 1913 |
| BshFI | GGCC | 4 cut(s) | 75, 394, 1637, 2176 |
| BshNI | GGYRCC | 2 cut(s) | 699, 1602 |
| BshVI | ATCGAT | 4 cut(s) | 1466, 2583, 3629, 3891 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2125, 2986 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1865, 3278 |
| BsiSI | CCGG | 4 cut(s) | 1553, 2283, 2898, 4334 |
| BslFI | GGGAC | 4 cut(s) | 47, 392, 949, 1731 |
| BsmBI | CGTCTC | 1 cut(s) | 4546 |
| BsmFI | GGGAC | 4 cut(s) | 47, 392, 949, 1731 |
| BsmI | GAATGC | 2 cut(s) | 268, 611 |
| BsnI | GGCC | 4 cut(s) | 75, 394, 1637, 2176 |
| Bso31I | GGTCTC | 5 cut(s) | 187, 1154, 1865, 2389, 3281 |
| BsoBI | CYCGRG | 2 cut(s) | 1865, 3278 |
| Bsp119I | TTCGAA | 2 cut(s) | 328, 1414 |
| Bsp1286I | GDGCHC | 3 cut(s) | 488, 2125, 2986 |
| Bsp1407I | TGTACA | 2 cut(s) | 316, 3988 |
| BspANI | GGCC | 4 cut(s) | 75, 394, 1637, 2176 |
| BspDI | ATCGAT | 4 cut(s) | 1466, 2583, 3629, 3891 |
| BspFNI | CGCG | 2 cut(s) | 179, 1913 |
| BspHI | TCATGA | 1 cut(s) | 4044 |
| BspLI | GGNNCC | 6 cut(s) | 192, 354, 701, 1604, 2085, 2209 |
| BspMAI | CTGCAG | 2 cut(s) | 2451, 3591 |
| BspPI | GGATC | 5 cut(s) | 185, 198, 803, 1462, 4083 |
| BspQI | GCTCTTC | 1 cut(s) | 1448 |
| BspT104I | TTCGAA | 2 cut(s) | 328, 1414 |
| BspT107I | GGYRCC | 2 cut(s) | 699, 1602 |
| BspTI | CTTAAG | 2 cut(s) | 1090, 2018 |
| BspTNI | GGTCTC | 5 cut(s) | 187, 1154, 1865, 2389, 3281 |
| BsrBI | CCGCTC | 1 cut(s) | 2401 |
| BsrDI | GCAATG | 2 cut(s) | 754, 2418 |
| BsrFI | RCCGGY | 2 cut(s) | 1552, 2897 |
| BsrGI | TGTACA | 2 cut(s) | 316, 3988 |
| BssAI | RCCGGY | 2 cut(s) | 1552, 2897 |
| BssECI | CCNNGG | 9 cut(s) | 186, 238, 1224, 1262, 1505, 1638, 1971, 2820, 4332 |
| BssNI | GRCGYC | 1 cut(s) | 4479 |
| BssT1I | CCWWGG | 2 cut(s) | 186, 238 |
| Bst2UI | CCWGG | 5 cut(s) | 1506, 1678, 1973, 2822, 3329 |
| Bst4CI | ACNGT | 6 cut(s) | 450, 2383, 2887, 3387, 3970, 4519 |
| Bst6I | CTCTTC | 2 cut(s) | 203, 1448 |
| BstACI | GRCGYC | 1 cut(s) | 4479 |
| BstAFI | CTTAAG | 2 cut(s) | 1090, 2018 |
| BstAUI | TGTACA | 2 cut(s) | 316, 3988 |
| BstBAI | YACGTR | 2 cut(s) | 961, 1294 |
| BstBI | TTCGAA | 2 cut(s) | 328, 1414 |
| BstC8I | GCNNGC | 5 cut(s) | 429, 1004, 2735, 2899, 3870 |
| BstDSI | CCRYGG | 1 cut(s) | 1262 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1509, 1681, 4022 |
| BstFNI | CGCG | 2 cut(s) | 179, 1913 |
| BstHHI | GCGC | 2 cut(s) | 132, 2897 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1064, 1553, 1634, 2192, 2201, 2360, 3041, 3776 |
| BstNI | CCWGG | 5 cut(s) | 1506, 1678, 1973, 2822, 3329 |
| BstNSI | RCATGY | 3 cut(s) | 696, 711, 3989 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 4040 |
| BstSCI | CCNGG | 7 cut(s) | 1504, 1676, 1971, 2281, 2820, 3327, 4332 |
| BstSFI | CTRYAG | 4 cut(s) | 1802, 2095, 2447, 3587 |
| BstUI | CGCG | 2 cut(s) | 179, 1913 |
| BstV1I | GCAGC | 5 cut(s) | 110, 278, 1067, 2298, 4078 |
| BstV2I | GAAGAC | 7 cut(s) | 729, 2444, 2603, 2778, 3678, 3971, 4040 |
| BstX2I | RGATCY | 3 cut(s) | 190, 808, 1383 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 87 |
| BstYI | RGATCY | 3 cut(s) | 190, 808, 1383 |
| Bsu15I | ATCGAT | 4 cut(s) | 1466, 2583, 3629, 3891 |
| Bsu36I | CCTNAGG | 3 cut(s) | 29, 1155, 2430 |
| BsuI | GTATCC | 1 cut(s) | 3601 |
| BsuRI | GGCC | 4 cut(s) | 75, 394, 1637, 2176 |
| BsuTUI | ATCGAT | 4 cut(s) | 1466, 2583, 3629, 3891 |
| BtgI | CCRYGG | 1 cut(s) | 1262 |
| BtgZI | GCGATG | 2 cut(s) | 2940, 4416 |
| BtrI | CACGTC | 2 cut(s) | 2776, 4339 |
| BtsI | GCAGTG | 1 cut(s) | 1055 |
| Cac8I | GCNNGC | 5 cut(s) | 429, 1004, 2735, 2899, 3870 |
| CciI | TCATGA | 1 cut(s) | 4044 |
| CfoI | GCGC | 2 cut(s) | 132, 2897 |
| Cfr10I | RCCGGY | 2 cut(s) | 1552, 2897 |
| Cfr13I | GGNCC | 5 cut(s) | 90, 393, 866, 1266, 2175 |
| ClaI | ATCGAT | 4 cut(s) | 1466, 2583, 3629, 3891 |
| CsiI | ACCWGGT | 1 cut(s) | 3327 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2841, 2876 |
| DraI | TTTAAA | 1 cut(s) | 2782 |
| DraIII | CACNNNGTG | 1 cut(s) | 1294 |
| Eam1104I | CTCTTC | 2 cut(s) | 203, 1448 |
| EarI | CTCTTC | 2 cut(s) | 203, 1448 |
| EciI | GGCGGA | 1 cut(s) | 3794 |
| Eco130I | CCWWGG | 2 cut(s) | 186, 238 |
| Eco24I | GRGCYC | 1 cut(s) | 488 |
| Eco31I | GGTCTC | 5 cut(s) | 187, 1154, 1865, 2389, 3281 |
| Eco32I | GATATC | 4 cut(s) | 61, 295, 1183, 2581 |
| Eco47I | GGWCC | 3 cut(s) | 90, 866, 1266 |
| Eco57I | CTGAAG | 3 cut(s) | 122, 2790, 4227 |
| Eco72I | CACGTG | 1 cut(s) | 1294 |
| Eco81I | CCTNAGG | 3 cut(s) | 29, 1155, 2430 |
| Eco88I | CYCGRG | 2 cut(s) | 1865, 3278 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1509, 1681, 4022 |
| EcoO109I | RGGNCCY | 1 cut(s) | 393 |
| EcoRI | GAATTC | 2 cut(s) | 111, 4342 |
| EcoRII | CCWGG | 5 cut(s) | 1504, 1676, 1971, 2820, 3327 |
| EcoRV | GATATC | 4 cut(s) | 61, 295, 1183, 2581 |
| EcoT14I | CCWWGG | 2 cut(s) | 186, 238 |
| EcoT38I | GRGCYC | 1 cut(s) | 488 |
| ErhI | CCWWGG | 2 cut(s) | 186, 238 |
| Esp3I | CGTCTC | 1 cut(s) | 4546 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2232, 2264 |
| FaqI | GGGAC | 4 cut(s) | 47, 392, 949, 1731 |
| FauI | CCCGC | 2 cut(s) | 2197, 4354 |
| FbaI | TGATCA | 5 cut(s) | 2217, 2538, 3234, 3633, 4374 |
| FblI | GTMKAC | 1 cut(s) | 1998 |
| Fnu4HI | GCNGC | 6 cut(s) | 99, 267, 1056, 1059, 2287, 4092 |
| FriOI | GRGCYC | 1 cut(s) | 488 |
| Fsp4HI | GCNGC | 6 cut(s) | 99, 267, 1056, 1059, 2287, 4092 |
| GlaI | GCGC | 2 cut(s) | 131, 2896 |
| GluI | GCNGC | 6 cut(s) | 99, 267, 1056, 1059, 2287, 4092 |
| GsaI | CCCAGC | 1 cut(s) | 2275 |
| GsuI | CTGGAG | 1 cut(s) | 2102 |
| HaeIII | GGCC | 4 cut(s) | 75, 394, 1637, 2176 |
| HapII | CCGG | 4 cut(s) | 1553, 2283, 2898, 4334 |
| HhaI | GCGC | 2 cut(s) | 132, 2897 |
| Hin1I | GRCGYC | 1 cut(s) | 4479 |
| Hin6I | GCGC | 2 cut(s) | 130, 2895 |
| HinP1I | GCGC | 2 cut(s) | 130, 2895 |
| HincII | GTYRAC | 1 cut(s) | 1909 |
| HindII | GTYRAC | 1 cut(s) | 1909 |
| HindIII | AAGCTT | 2 cut(s) | 335, 1620 |
| HinfI | GANTC | 6 cut(s) | 344, 371, 640, 912, 940, 2051 |
| HpaI | GTTAAC | 1 cut(s) | 1909 |
| HpaII | CCGG | 4 cut(s) | 1553, 2283, 2898, 4334 |
| Hpy166II | GTNNAC | 8 cut(s) | 93, 553, 1909, 1948, 1999, 2406, 3928, 4367 |
| Hpy8I | GTNNAC | 8 cut(s) | 93, 553, 1909, 1948, 1999, 2406, 3928, 4367 |
| HpyCH4III | ACNGT | 6 cut(s) | 450, 2383, 2887, 3387, 3970, 4519 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1064, 1553, 1634, 2192, 2201, 2360, 3041, 3776 |
| Hsp92I | GRCGYC | 1 cut(s) | 4479 |
| HspAI | GCGC | 2 cut(s) | 130, 2895 |
| KroI | GCCGGC | 1 cut(s) | 2897 |
| KroNI | GCCGGC | 1 cut(s) | 2899 |
| Ksp22I | TGATCA | 5 cut(s) | 2217, 2538, 3234, 3633, 4374 |
| KspAI | GTTAAC | 1 cut(s) | 1909 |
| LguI | GCTCTTC | 1 cut(s) | 1448 |
| LmnI | GCTCC | 9 cut(s) | 653, 1072, 2083, 2989, 3130, 3724, 3865, 3914, 4465 |
| Lsp1109I | GCAGC | 5 cut(s) | 110, 278, 1067, 2298, 4078 |
| MabI | ACCWGGT | 1 cut(s) | 3327 |
| MaeIII | GTNAC | 8 cut(s) | 857, 1514, 1700, 2197, 2809, 3505, 3842, 4246 |
| MbiI | CCGCTC | 1 cut(s) | 2401 |
| MfeI | CAATTG | 4 cut(s) | 1428, 1696, 1718, 3838 |
| MflI | RGATCY | 3 cut(s) | 190, 808, 1383 |
| MhlI | GDGCHC | 3 cut(s) | 488, 2125, 2986 |
| MlyI | GAGTC | 4 cut(s) | 338, 380, 649, 949 |
| MmeI | TCCRAC | 3 cut(s) | 104, 1710, 3105 |
| MroNI | GCCGGC | 1 cut(s) | 2897 |
| MroXI | GAANNNNTTC | 5 cut(s) | 21, 2262, 2940, 3473, 4416 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1304, 2928 |
| MspA1I | CMGCKG | 3 cut(s) | 142, 2204, 4361 |
| MspCI | CTTAAG | 2 cut(s) | 1090, 2018 |
| MspI | CCGG | 4 cut(s) | 1553, 2283, 2898, 4334 |
| MspR9I | CCNGG | 7 cut(s) | 1506, 1678, 1973, 2283, 2822, 3329, 4334 |
| MunI | CAATTG | 4 cut(s) | 1428, 1696, 1718, 3838 |
| Mva1269I | GAATGC | 2 cut(s) | 268, 611 |
| MvaI | CCWGG | 5 cut(s) | 1506, 1678, 1973, 2822, 3329 |
| MvnI | CGCG | 2 cut(s) | 179, 1913 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1064, 1553, 1634, 2192, 2201, 2360, 3041, 3776 |
| NaeI | GCCGGC | 1 cut(s) | 2899 |
| NciI | CCSGG | 2 cut(s) | 2283, 4334 |
| NgoMIV | GCCGGC | 1 cut(s) | 2897 |
| NlaIV | GGNNCC | 6 cut(s) | 192, 354, 701, 1604, 2085, 2209 |
| NmeAIII | GCCGAG | 2 cut(s) | 1249, 1663 |
| NmuCI | GTSAC | 5 cut(s) | 1514, 1700, 2809, 3505, 4246 |
| NspI | RCATGY | 3 cut(s) | 696, 711, 3989 |
| NspV | TTCGAA | 2 cut(s) | 328, 1414 |
| PaeR7I | CTCGAG | 1 cut(s) | 3278 |
| PagI | TCATGA | 1 cut(s) | 4044 |
| PciI | ACATGT | 1 cut(s) | 3985 |
| PciSI | GCTCTTC | 1 cut(s) | 1448 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3626 |
| PctI | GAATGC | 2 cut(s) | 268, 611 |
| PdiI | GCCGGC | 1 cut(s) | 2899 |
| PdmI | GAANNNNTTC | 5 cut(s) | 21, 2262, 2940, 3473, 4416 |
| PfeI | GAWTC | 2 cut(s) | 912, 2051 |
| PkrI | GCNGC | 6 cut(s) | 100, 268, 1057, 1060, 2288, 4093 |
| PleI | GAGTC | 4 cut(s) | 338, 379, 648, 948 |
| PmaCI | CACGTG | 1 cut(s) | 1294 |
| PmlI | CACGTG | 1 cut(s) | 1294 |
| PpsI | GAGTC | 4 cut(s) | 338, 379, 648, 948 |
| Ppu21I | YACGTR | 2 cut(s) | 961, 1294 |
| PscI | ACATGT | 1 cut(s) | 3985 |
| PshAI | GACNNNNGTC | 1 cut(s) | 4040 |
| PshBI | ATTAAT | 2 cut(s) | 1707, 2649 |
| Psp1406I | AACGTT | 2 cut(s) | 1407, 2499 |
| Psp6I | CCWGG | 5 cut(s) | 1504, 1676, 1971, 2820, 3327 |
| PspCI | CACGTG | 1 cut(s) | 1294 |
| PspFI | CCCAGC | 1 cut(s) | 2271 |
| PspGI | CCWGG | 5 cut(s) | 1504, 1676, 1971, 2820, 3327 |
| PspN4I | GGNNCC | 6 cut(s) | 192, 354, 701, 1604, 2085, 2209 |
| PspPI | GGNCC | 5 cut(s) | 90, 393, 866, 1266, 2175 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3607, 3639 |
| PstI | CTGCAG | 2 cut(s) | 2451, 3591 |
| PsuI | RGATCY | 3 cut(s) | 190, 808, 1383 |
| PvuII | CAGCTG | 1 cut(s) | 142 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1304, 2928 |
| SapI | GCTCTTC | 1 cut(s) | 1448 |
| SatI | GCNGC | 6 cut(s) | 99, 267, 1056, 1059, 2287, 4092 |
| Sau96I | GGNCC | 5 cut(s) | 90, 393, 866, 1266, 2175 |
| ScaI | AGTACT | 2 cut(s) | 757, 1501 |
| SchI | GAGTC | 4 cut(s) | 338, 380, 649, 949 |
| ScrFI | CCNGG | 7 cut(s) | 1506, 1678, 1973, 2283, 2822, 3329, 4334 |
| SduI | GDGCHC | 3 cut(s) | 488, 2125, 2986 |
| SexAI | ACCWGGT | 1 cut(s) | 3327 |
| SfcI | CTRYAG | 4 cut(s) | 1802, 2095, 2447, 3587 |
| Sfr274I | CTCGAG | 1 cut(s) | 3278 |
| SfuI | TTCGAA | 2 cut(s) | 328, 1414 |
| SinI | GGWCC | 3 cut(s) | 90, 866, 1266 |
| SlaI | CTCGAG | 1 cut(s) | 3278 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1304, 2928 |
| SspI | AATATT | 3 cut(s) | 2788, 3484, 4225 |
| StyD4I | CCNGG | 7 cut(s) | 1504, 1676, 1971, 2281, 2820, 3327, 4332 |
| StyI | CCWWGG | 2 cut(s) | 186, 238 |
| TaaI | ACNGT | 6 cut(s) | 450, 2383, 2887, 3387, 3970, 4519 |
| TaqII | GACCGA | 1 cut(s) | 3608 |
| TatI | WGTACW | 5 cut(s) | 316, 646, 755, 1499, 3988 |
| TauI | GCSGC | 1 cut(s) | 1061 |
| TfiI | GAWTC | 2 cut(s) | 912, 2051 |
| TseFI | GTSAC | 5 cut(s) | 1514, 1700, 2809, 3505, 4246 |
| TseI | GCWGC | 5 cut(s) | 98, 266, 1055, 2286, 4091 |
| Tsp45I | GTSAC | 5 cut(s) | 1514, 1700, 2809, 3505, 4246 |
| TspGWI | ACGGA | 6 cut(s) | 260, 305, 734, 1279, 2268, 4368 |
| Vha464I | CTTAAG | 2 cut(s) | 1090, 2018 |
| VpaK11BI | GGWCC | 3 cut(s) | 90, 866, 1266 |
| VspI | ATTAAT | 2 cut(s) | 1707, 2649 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1509, 1681, 4022 |
| XceI | RCATGY | 3 cut(s) | 696, 711, 3989 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 448 |
| XhoI | CTCGAG | 1 cut(s) | 3278 |
| XmiI | GTMKAC | 1 cut(s) | 1998 |
| XmnI | GAANNNNTTC | 5 cut(s) | 21, 2262, 2940, 3473, 4416 |
| ZraI | GACGTC | 1 cut(s) | 4480 |
| ZrmI | AGTACT | 2 cut(s) | 757, 1501 |