Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g19150 FvH4_4g19150 FvH4_4g19150 FvH4_4g19150 FvH4_4g19150 FvH4_4g19150 FvH4_4g19150 |
| prunus_persica | Prupe.4G109500_v2.0.a1 Prupe.4G109500_v2.0.a1 Prupe.4G109500_v2.0.a1 Prupe.4G109600_v2.0.a1 Prupe.4G109900_v2.0.a1 Prupe.4G263700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0424091 RchiOBHm_Chr5g0019831 RchiOBHm_Chr5g0020211 RchiOBHm_Chr5g0020221 |
| rosa_laevigata | RLG00000007504 |
| rosa_multiflora | Rmu_co8478429.1_g000001 Rmu_sc0002260.1_g000052 Rmu_sc0002260.1_g000058 Rmu_sc0002260.1_g000060 |
| rosa_roxburghii | Rroxscaffold_5G00366100 |
| rosa_rugosa | Rorug04G0192900 Rorug04G0193000 Rorug04G0193100 Rorug04G0193100 Rorug04G0193100 Rorug07G0254600 |
| rosa_samantha | Rh4AG251200 Rh4BG256200 Rh4BG256300 Rh4CG266700 Rh4DG250800 Rh4DG250900 Rh5AG148300 Rh5AG366200 Rh5AG366300 Rh5CG159200 |
| rosa_wichuraiana | Rw4G021640 Rw5G013110 Rw5G013120 Rw5G034340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1223 |
| AarI | CACCTGC | 1 cut(s) | 2344 |
| AatII | GACGTC | 2 cut(s) | 772, 2613 |
| Acc16I | TGCGCA | 1 cut(s) | 2256 |
| Acc36I | ACCTGC | 1 cut(s) | 2344 |
| Acc65I | GGTACC | 1 cut(s) | 2581 |
| AccB1I | GGYRCC | 2 cut(s) | 2567, 2581 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 269 |
| AccI | GTMKAC | 3 cut(s) | 1095, 1902, 2649 |
| AccII | CGCG | 3 cut(s) | 116, 831, 3654 |
| AcoI | YGGCCR | 2 cut(s) | 514, 732 |
| AcuI | CTGAAG | 8 cut(s) | 300, 1680, 2505, 2576, 2625, 3591, 5027, 5079 |
| AcvI | CACGTG | 1 cut(s) | 412 |
| AcyI | GRCGYC | 2 cut(s) | 769, 2610 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 269, 736, 2578, 2638, 3343, 4087, 4831 |
| AhlI | ACTAGT | 4 cut(s) | 2741, 3446, 4190, 4934 |
| AjiI | CACGTC | 1 cut(s) | 824 |
| AjnI | CCWGG | 5 cut(s) | 162, 380, 729, 1050, 1613 |
| AleI | CACNNNNGTG | 1 cut(s) | 2217 |
| Alw21I | GWGCWC | 3 cut(s) | 2703, 3408, 4152 |
| Alw26I | GTCTC | 8 cut(s) | 8, 286, 839, 941, 1141, 1459, 2938, 3728 |
| Ama87I | CYCGRG | 2 cut(s) | 1351, 5141 |
| AoxI | GGCC | 6 cut(s) | 514, 732, 1431, 2059, 3112, 3856 |
| ApeKI | GCWGC | 6 cut(s) | 406, 865, 1359, 2257, 4039, 4435 |
| AseI | ATTAAT | 3 cut(s) | 875, 1232, 2771 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 2090, 2808, 2898, 3513, 4257, 5001 |
| Asp718I | GGTACC | 1 cut(s) | 2581 |
| AspLEI | GCGC | 3 cut(s) | 1084, 2257, 3654 |
| AspS9I | GGNCC | 8 cut(s) | 358, 1275, 1537, 1804, 2753, 3435, 4179, 4923 |
| AsuC2I | CCSGG | 1 cut(s) | 2000 |
| AsuII | TTCGAA | 1 cut(s) | 3665 |
| AvaI | CYCGRG | 2 cut(s) | 1351, 5141 |
| AvaII | GGWCC | 8 cut(s) | 358, 1275, 1537, 1804, 2753, 3435, 4179, 4923 |
| BaeGI | GKGCMC | 1 cut(s) | 2570 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 333, 366 |
| BalI | TGGCCA | 2 cut(s) | 516, 734 |
| BanI | GGYRCC | 2 cut(s) | 2567, 2581 |
| BauI | CACGAG | 2 cut(s) | 289, 4397 |
| BbrPI | CACGTG | 1 cut(s) | 412 |
| BbsI | GAAGAC | 6 cut(s) | 86, 266, 2432, 2613, 3346, 4090 |
| Bbv12I | GWGCWC | 3 cut(s) | 2703, 3408, 4152 |
| BbvCI | CCTCAGC | 1 cut(s) | 1085 |
| BbvI | GCAGC | 6 cut(s) | 418, 877, 1371, 2269, 4026, 4447 |
| BccI | CCATC | 8 cut(s) | 132, 190, 407, 506, 1000, 1158, 1385, 1815 |
| BceAI | ACGGC | 2 cut(s) | 3127, 3871 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 528, 562, 1332, 1366 |
| BciT130I | CCWGG | 5 cut(s) | 164, 382, 731, 1052, 1615 |
| BclI | TGATCA | 1 cut(s) | 670 |
| BcnI | CCSGG | 1 cut(s) | 2000 |
| BcoDI | GTCTC | 8 cut(s) | 8, 286, 839, 941, 1141, 1459, 2938, 3728 |
| BcuI | ACTAGT | 4 cut(s) | 2741, 3446, 4190, 4934 |
| BfaI | CTAG | 8 cut(s) | 1631, 2742, 3243, 3447, 3987, 4191, 4731, 4935 |
| BfmI | CTRYAG | 3 cut(s) | 1520, 1879, 1903 |
| BfoI | RGCGCY | 1 cut(s) | 1085 |
| BfuAI | ACCTGC | 1 cut(s) | 2344 |
| BglII | AGATCT | 1 cut(s) | 477 |
| BisI | GCNGC | 6 cut(s) | 407, 866, 1360, 2258, 4040, 4436 |
| BlsI | GCNGC | 6 cut(s) | 408, 867, 1361, 2259, 4041, 4437 |
| BmcAI | AGTACT | 2 cut(s) | 931, 1066 |
| Bme1390I | CCNGG | 6 cut(s) | 164, 382, 731, 1052, 1615, 2000 |
| Bme18I | GGWCC | 8 cut(s) | 358, 1275, 1537, 1804, 2753, 3435, 4179, 4923 |
| BmeT110I | CYCGRG | 2 cut(s) | 1351, 5141 |
| BmgBI | CACGTC | 1 cut(s) | 824 |
| BmgT120I | GGNCC | 8 cut(s) | 358, 1275, 1537, 1804, 2753, 3435, 4179, 4923 |
| BmiI | GGNNCC | 7 cut(s) | 1276, 1805, 2569, 2583, 3016, 3760, 4504 |
| BmrFI | CCNGG | 6 cut(s) | 164, 382, 731, 1052, 1615, 2000 |
| BmrI | ACTGGG | 2 cut(s) | 2401, 2827 |
| BmuI | ACTGGG | 2 cut(s) | 2401, 2827 |
| BpiI | GAAGAC | 6 cut(s) | 86, 266, 2432, 2613, 3346, 4090 |
| BpmI | CTGGAG | 3 cut(s) | 15, 1441, 1847 |
| Bpu10I | CCTNAGC | 2 cut(s) | 678, 1085 |
| Bpu14I | TTCGAA | 1 cut(s) | 3665 |
| BpuEI | CTTGAG | 8 cut(s) | 1322, 1371, 1412, 1874, 2941, 2969, 3646, 5134 |
| BpuMI | CCSGG | 1 cut(s) | 2000 |
| Bsa29I | ATCGAT | 1 cut(s) | 2970 |
| BsaAI | YACGTR | 1 cut(s) | 412 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1604, 3071, 3815, 4559 |
| BsaHI | GRCGYC | 2 cut(s) | 769, 2610 |
| BsaJI | CCNNGG | 9 cut(s) | 56, 380, 703, 735, 1050, 1614, 1778, 2522, 2778 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 793, 823 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 269, 736, 2578, 2638, 3343, 4087, 4831 |
| Bse118I | RCCGGY | 2 cut(s) | 1894, 2114 |
| Bse1I | ACTGG | 7 cut(s) | 497, 697, 808, 1154, 1640, 2396, 2822 |
| Bse3DI | GCAATG | 4 cut(s) | 2983, 3688, 3810, 4554 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1604, 3071, 3815, 4559 |
| BseBI | CCWGG | 5 cut(s) | 164, 382, 731, 1052, 1615 |
| BseCI | ATCGAT | 1 cut(s) | 2970 |
| BseDI | CCNNGG | 9 cut(s) | 56, 380, 703, 735, 1050, 1614, 1778, 2522, 2778 |
| BseJI | GATNNNNATC | 4 cut(s) | 1604, 3071, 3815, 4559 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 269, 736, 2578, 2638, 3343, 4087, 4831 |
| BseMI | GCAATG | 4 cut(s) | 2983, 3688, 3810, 4554 |
| BseMII | CTCAG | 5 cut(s) | 1076, 3130, 3874, 4269, 4618 |
| BseNI | ACTGG | 7 cut(s) | 497, 697, 808, 1154, 1640, 2396, 2822 |
| BseRI | GAGGAG | 3 cut(s) | 218, 221, 1598 |
| BseSI | GKGCMC | 1 cut(s) | 2570 |
| BseXI | GCAGC | 6 cut(s) | 418, 877, 1371, 2269, 4026, 4447 |
| BseYI | CCCAGC | 2 cut(s) | 3533, 5021 |
| Bsh1236I | CGCG | 3 cut(s) | 116, 831, 3654 |
| BshFI | GGCC | 6 cut(s) | 516, 734, 1433, 2061, 3114, 3858 |
| BshNI | GGYRCC | 2 cut(s) | 2567, 2581 |
| BshVI | ATCGAT | 1 cut(s) | 2970 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2703, 3408, 4152 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1351, 5141 |
| BsiSI | CCGG | 3 cut(s) | 1895, 2000, 2115 |
| BslFI | GGGAC | 3 cut(s) | 810, 1713, 1817 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 269, 736, 2578, 2638, 3343, 4087, 4831 |
| BsmAI | GTCTC | 8 cut(s) | 8, 286, 839, 941, 1141, 1459, 2938, 3728 |
| BsmFI | GGGAC | 3 cut(s) | 810, 1713, 1817 |
| BsmI | GAATGC | 2 cut(s) | 427, 4576 |
| BsnI | GGCC | 6 cut(s) | 516, 734, 1433, 2061, 3114, 3858 |
| BsoBI | CYCGRG | 2 cut(s) | 1351, 5141 |
| Bsp119I | TTCGAA | 1 cut(s) | 3665 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2570, 2703, 3408, 4152 |
| Bsp19I | CCATGG | 3 cut(s) | 56, 703, 2522 |
| BspANI | GGCC | 6 cut(s) | 516, 734, 1433, 2061, 3114, 3858 |
| BspCNI | CTCAG | 5 cut(s) | 1077, 3129, 3873, 4270, 4617 |
| BspDI | ATCGAT | 1 cut(s) | 2970 |
| BspFNI | CGCG | 3 cut(s) | 116, 831, 3654 |
| BspHI | TCATGA | 2 cut(s) | 1501, 1608 |
| BspLI | GGNNCC | 7 cut(s) | 1276, 1805, 2569, 2583, 3016, 3760, 4504 |
| BspMAI | CTGCAG | 1 cut(s) | 1883 |
| BspMI | ACCTGC | 1 cut(s) | 2344 |
| BspQI | GCTCTTC | 2 cut(s) | 1220, 1935 |
| BspT104I | TTCGAA | 1 cut(s) | 3665 |
| BspT107I | GGYRCC | 2 cut(s) | 2567, 2581 |
| BsrDI | GCAATG | 4 cut(s) | 2983, 3688, 3810, 4554 |
| BsrFI | RCCGGY | 2 cut(s) | 1894, 2114 |
| BsrI | ACTGG | 7 cut(s) | 497, 697, 808, 1154, 1640, 2396, 2822 |
| BssAI | RCCGGY | 2 cut(s) | 1894, 2114 |
| BssECI | CCNNGG | 9 cut(s) | 56, 380, 703, 735, 1050, 1614, 1778, 2522, 2778 |
| BssNI | GRCGYC | 2 cut(s) | 769, 2610 |
| BssSI | CACGAG | 2 cut(s) | 289, 4397 |
| BssT1I | CCWWGG | 6 cut(s) | 56, 703, 735, 1778, 2522, 2778 |
| Bst2BI | CACGAG | 2 cut(s) | 289, 4397 |
| Bst2UI | CCWGG | 5 cut(s) | 164, 382, 731, 1052, 1615 |
| Bst4CI | ACNGT | 3 cut(s) | 346, 2219, 3934 |
| Bst6I | CTCTTC | 7 cut(s) | 900, 1220, 1935, 2334, 3039, 3783, 4527 |
| BstACI | GRCGYC | 2 cut(s) | 769, 2610 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4048 |
| BstBAI | YACGTR | 1 cut(s) | 412 |
| BstBI | TTCGAA | 1 cut(s) | 3665 |
| BstC8I | GCNNGC | 5 cut(s) | 53, 1817, 2116, 4019, 4763 |
| BstDEI | CTNAG | 8 cut(s) | 678, 1085, 1197, 3116, 3860, 4278, 4370, 4604 |
| BstDSI | CCRYGG | 3 cut(s) | 56, 703, 2522 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 734, 2576 |
| BstFNI | CGCG | 3 cut(s) | 116, 831, 3654 |
| BstH2I | RGCGCY | 1 cut(s) | 1085 |
| BstHHI | GCGC | 3 cut(s) | 1084, 2257, 3654 |
| BstMAI | GTCTC | 8 cut(s) | 8, 286, 839, 941, 1141, 1459, 2938, 3728 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 731, 2120, 2756, 4048 |
| BstNI | CCWGG | 5 cut(s) | 164, 382, 731, 1052, 1615 |
| BstNSI | RCATGY | 1 cut(s) | 1819 |
| BstSCI | CCNGG | 6 cut(s) | 162, 380, 729, 1050, 1613, 1998 |
| BstSFI | CTRYAG | 3 cut(s) | 1520, 1879, 1903 |
| BstSLI | GKGCMC | 1 cut(s) | 2570 |
| BstUI | CGCG | 3 cut(s) | 116, 831, 3654 |
| BstV1I | GCAGC | 6 cut(s) | 418, 877, 1371, 2269, 4026, 4447 |
| BstV2I | GAAGAC | 6 cut(s) | 86, 266, 2432, 2613, 3346, 4090 |
| BstX2I | RGATCY | 6 cut(s) | 120, 477, 1021, 3466, 4210, 4954 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 704, 2069 |
| BstYI | RGATCY | 6 cut(s) | 120, 477, 1021, 3466, 4210, 4954 |
| Bsu15I | ATCGAT | 1 cut(s) | 2970 |
| BsuRI | GGCC | 6 cut(s) | 516, 734, 1433, 2061, 3114, 3858 |
| BsuTUI | ATCGAT | 1 cut(s) | 2970 |
| BtgI | CCRYGG | 3 cut(s) | 56, 703, 2522 |
| BtrI | CACGTC | 1 cut(s) | 824 |
| BtsI | GCAGTG | 4 cut(s) | 1488, 2649, 3008, 3066 |
| BveI | ACCTGC | 1 cut(s) | 2344 |
| Cac8I | GCNNGC | 5 cut(s) | 53, 1817, 2116, 4019, 4763 |
| CciI | TCATGA | 2 cut(s) | 1501, 1608 |
| CfoI | GCGC | 3 cut(s) | 1084, 2257, 3654 |
| Cfr10I | RCCGGY | 2 cut(s) | 1894, 2114 |
| Cfr13I | GGNCC | 8 cut(s) | 358, 1275, 1537, 1804, 2753, 3435, 4179, 4923 |
| ClaI | ATCGAT | 1 cut(s) | 2970 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 614, 649 |
| DdeI | CTNAG | 8 cut(s) | 678, 1085, 1197, 3116, 3860, 4278, 4370, 4604 |
| DraI | TTTAAA | 4 cut(s) | 1105, 1591, 3322, 4810 |
| EaeI | YGGCCR | 2 cut(s) | 514, 732 |
| Eam1104I | CTCTTC | 7 cut(s) | 900, 1220, 1935, 2334, 3039, 3783, 4527 |
| EarI | CTCTTC | 7 cut(s) | 900, 1220, 1935, 2334, 3039, 3783, 4527 |
| EciI | GGCGGA | 1 cut(s) | 1583 |
| Eco130I | CCWWGG | 6 cut(s) | 56, 703, 735, 1778, 2522, 2778 |
| Eco147I | AGGCCT | 1 cut(s) | 1433 |
| Eco32I | GATATC | 2 cut(s) | 286, 1057 |
| Eco47I | GGWCC | 8 cut(s) | 358, 1275, 1537, 1804, 2753, 3435, 4179, 4923 |
| Eco57I | CTGAAG | 8 cut(s) | 300, 1680, 2505, 2576, 2625, 3591, 5027, 5079 |
| Eco72I | CACGTG | 1 cut(s) | 412 |
| Eco88I | CYCGRG | 2 cut(s) | 1351, 5141 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 734, 2576 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1275 |
| EcoRI | GAATTC | 5 cut(s) | 761, 2026, 2956, 3661, 4405 |
| EcoRII | CCWGG | 5 cut(s) | 162, 380, 729, 1050, 1613 |
| EcoRV | GATATC | 2 cut(s) | 286, 1057 |
| EcoT14I | CCWWGG | 6 cut(s) | 56, 703, 735, 1778, 2522, 2778 |
| EcoT22I | ATGCAT | 1 cut(s) | 1821 |
| ErhI | CCWWGG | 6 cut(s) | 56, 703, 735, 1778, 2522, 2778 |
| FaqI | GGGAC | 3 cut(s) | 810, 1713, 1817 |
| FauI | CCCGC | 5 cut(s) | 109, 836, 1738, 2107, 2991 |
| FbaI | TGATCA | 1 cut(s) | 670 |
| FblI | GTMKAC | 3 cut(s) | 1095, 1902, 2649 |
| Fnu4HI | GCNGC | 6 cut(s) | 407, 866, 1360, 2258, 4040, 4436 |
| Fsp4HI | GCNGC | 6 cut(s) | 407, 866, 1360, 2258, 4040, 4436 |
| FspBI | CTAG | 8 cut(s) | 1631, 2742, 3243, 3447, 3987, 4191, 4731, 4935 |
| FspI | TGCGCA | 1 cut(s) | 2256 |
| GlaI | GCGC | 3 cut(s) | 1083, 2256, 3653 |
| GluI | GCNGC | 6 cut(s) | 407, 866, 1360, 2258, 4040, 4436 |
| GsaI | CCCAGC | 2 cut(s) | 3537, 5025 |
| GsuI | CTGGAG | 3 cut(s) | 15, 1441, 1847 |
| HaeII | RGCGCY | 1 cut(s) | 1085 |
| HaeIII | GGCC | 6 cut(s) | 516, 734, 1433, 2061, 3114, 3858 |
| HapII | CCGG | 3 cut(s) | 1895, 2000, 2115 |
| HhaI | GCGC | 3 cut(s) | 1084, 2257, 3654 |
| Hin1I | GRCGYC | 2 cut(s) | 769, 2610 |
| Hin6I | GCGC | 3 cut(s) | 1082, 2255, 3652 |
| HinP1I | GCGC | 3 cut(s) | 1082, 2255, 3652 |
| HincII | GTYRAC | 3 cut(s) | 213, 2248, 3718 |
| HindII | GTYRAC | 3 cut(s) | 213, 2248, 3718 |
| HindIII | AAGCTT | 3 cut(s) | 605, 1199, 1416 |
| HinfI | GANTC | 9 cut(s) | 545, 595, 955, 1118, 1461, 1871, 2342, 2762, 5150 |
| HpaI | GTTAAC | 1 cut(s) | 213 |
| HpaII | CCGG | 3 cut(s) | 1895, 2000, 2115 |
| Hpy166II | GTNNAC | 8 cut(s) | 213, 623, 1096, 1903, 2248, 2650, 3718, 4610 |
| Hpy8I | GTNNAC | 8 cut(s) | 213, 623, 1096, 1903, 2248, 2650, 3718, 4610 |
| Hpy99I | CGWCG | 3 cut(s) | 1169, 1580, 2026 |
| HpyCH4III | ACNGT | 3 cut(s) | 346, 2219, 3934 |
| HpyCH4IV | ACGT | 8 cut(s) | 411, 769, 823, 990, 1179, 1719, 1923, 2610 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 731, 2120, 2756, 4048 |
| HpyF3I | CTNAG | 8 cut(s) | 678, 1085, 1197, 3116, 3860, 4278, 4370, 4604 |
| HpySE526I | ACGT | 8 cut(s) | 411, 769, 823, 990, 1179, 1719, 1923, 2610 |
| Hsp92I | GRCGYC | 2 cut(s) | 769, 2610 |
| HspAI | GCGC | 3 cut(s) | 1082, 2255, 3652 |
| KpnI | GGTACC | 1 cut(s) | 2585 |
| KroI | GCCGGC | 1 cut(s) | 2114 |
| KroNI | GCCGGC | 1 cut(s) | 2116 |
| Ksp22I | TGATCA | 1 cut(s) | 670 |
| KspAI | GTTAAC | 1 cut(s) | 213 |
| LguI | GCTCTTC | 2 cut(s) | 1220, 1935 |
| LmnI | GCTCC | 6 cut(s) | 2128, 2551, 2857, 3562, 4306, 5050 |
| Lsp1109I | GCAGC | 6 cut(s) | 418, 877, 1371, 2269, 4026, 4447 |
| MaeI | CTAG | 8 cut(s) | 1631, 2742, 3243, 3447, 3987, 4191, 4731, 4935 |
| MaeII | ACGT | 8 cut(s) | 411, 769, 823, 990, 1179, 1719, 1923, 2610 |
| MaeIII | GTNAC | 6 cut(s) | 499, 754, 797, 941, 1666, 2545 |
| MfeI | CAATTG | 3 cut(s) | 540, 3711, 5164 |
| MflI | RGATCY | 6 cut(s) | 120, 477, 1021, 3466, 4210, 4954 |
| MhlI | GDGCHC | 4 cut(s) | 2570, 2703, 3408, 4152 |
| MlsI | TGGCCA | 2 cut(s) | 516, 734 |
| MluNI | TGGCCA | 2 cut(s) | 516, 734 |
| MlyI | GAGTC | 3 cut(s) | 604, 1880, 2351 |
| MmeI | TCCRAC | 5 cut(s) | 450, 2232, 3584, 4422, 5072 |
| Mox20I | TGGCCA | 2 cut(s) | 516, 734 |
| Mph1103I | ATGCAT | 1 cut(s) | 1821 |
| MroNI | GCCGGC | 1 cut(s) | 2114 |
| MroXI | GAANNNNTTC | 6 cut(s) | 2090, 2808, 2898, 3513, 4257, 5001 |
| MscI | TGGCCA | 2 cut(s) | 516, 734 |
| MslI | CAYNNNNRTG | 8 cut(s) | 2217, 2708, 3312, 3413, 4056, 4157, 4800, 4901 |
| Msp20I | TGGCCA | 2 cut(s) | 516, 734 |
| MspA1I | CMGCKG | 1 cut(s) | 2759 |
| MspI | CCGG | 3 cut(s) | 1895, 2000, 2115 |
| MspR9I | CCNGG | 6 cut(s) | 164, 382, 731, 1052, 1615, 2000 |
| MssI | GTTTAAAC | 1 cut(s) | 1591 |
| MunI | CAATTG | 3 cut(s) | 540, 3711, 5164 |
| Mva1269I | GAATGC | 2 cut(s) | 427, 4576 |
| MvaI | CCWGG | 5 cut(s) | 164, 382, 731, 1052, 1615 |
| MvnI | CGCG | 3 cut(s) | 116, 831, 3654 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 731, 2120, 2756, 4048 |
| NaeI | GCCGGC | 1 cut(s) | 2116 |
| NciI | CCSGG | 1 cut(s) | 2000 |
| NcoI | CCATGG | 3 cut(s) | 56, 703, 2522 |
| NgoMIV | GCCGGC | 1 cut(s) | 2114 |
| NlaIV | GGNNCC | 7 cut(s) | 1276, 1805, 2569, 2583, 3016, 3760, 4504 |
| NmuCI | GTSAC | 5 cut(s) | 499, 754, 797, 941, 1666 |
| NsbI | TGCGCA | 1 cut(s) | 2256 |
| NsiI | ATGCAT | 1 cut(s) | 1821 |
| NspI | RCATGY | 1 cut(s) | 1819 |
| NspV | TTCGAA | 1 cut(s) | 3665 |
| OliI | CACNNNNGTG | 1 cut(s) | 2217 |
| PaeI | GCATGC | 1 cut(s) | 1819 |
| PaeR7I | CTCGAG | 2 cut(s) | 1351, 5141 |
| PagI | TCATGA | 2 cut(s) | 1501, 1608 |
| PaqCI | CACCTGC | 1 cut(s) | 2344 |
| PceI | AGGCCT | 1 cut(s) | 1433 |
| PciSI | GCTCTTC | 2 cut(s) | 1220, 1935 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3479 |
| PctI | GAATGC | 2 cut(s) | 427, 4576 |
| PdiI | GCCGGC | 1 cut(s) | 2116 |
| PdmI | GAANNNNTTC | 6 cut(s) | 2090, 2808, 2898, 3513, 4257, 5001 |
| PfeI | GAWTC | 6 cut(s) | 545, 955, 1118, 1461, 2762, 5150 |
| PflFI | GACNNNGTC | 1 cut(s) | 4072 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 269 |
| PkrI | GCNGC | 6 cut(s) | 408, 867, 1361, 2259, 4041, 4437 |
| PleI | GAGTC | 3 cut(s) | 603, 1879, 2350 |
| PmaCI | CACGTG | 1 cut(s) | 412 |
| PmeI | GTTTAAAC | 1 cut(s) | 1591 |
| PmlI | CACGTG | 1 cut(s) | 412 |
| PpsI | GAGTC | 3 cut(s) | 603, 1879, 2350 |
| Ppu21I | YACGTR | 1 cut(s) | 412 |
| PpuMI | RGGWCCY | 1 cut(s) | 1275 |
| PshBI | ATTAAT | 3 cut(s) | 875, 1232, 2771 |
| PsiI | TTATAA | 1 cut(s) | 1223 |
| Psp5II | RGGWCCY | 1 cut(s) | 1275 |
| Psp6I | CCWGG | 5 cut(s) | 162, 380, 729, 1050, 1613 |
| PspCI | CACGTG | 1 cut(s) | 412 |
| PspFI | CCCAGC | 2 cut(s) | 3533, 5021 |
| PspGI | CCWGG | 5 cut(s) | 162, 380, 729, 1050, 1613 |
| PspN4I | GGNNCC | 7 cut(s) | 1276, 1805, 2569, 2583, 3016, 3760, 4504 |
| PspPI | GGNCC | 8 cut(s) | 358, 1275, 1537, 1804, 2753, 3435, 4179, 4923 |
| PspPPI | RGGWCCY | 1 cut(s) | 1275 |
| PspXI | VCTCGAGB | 2 cut(s) | 1351, 5141 |
| PstI | CTGCAG | 1 cut(s) | 1883 |
| PsuI | RGATCY | 6 cut(s) | 120, 477, 1021, 3466, 4210, 4954 |
| PsyI | GACNNNGTC | 1 cut(s) | 4072 |
| RseI | CAYNNNNRTG | 8 cut(s) | 2217, 2708, 3312, 3413, 4056, 4157, 4800, 4901 |
| SapI | GCTCTTC | 2 cut(s) | 1220, 1935 |
| SatI | GCNGC | 6 cut(s) | 407, 866, 1360, 2258, 4040, 4436 |
| Sau96I | GGNCC | 8 cut(s) | 358, 1275, 1537, 1804, 2753, 3435, 4179, 4923 |
| ScaI | AGTACT | 2 cut(s) | 931, 1066 |
| SchI | GAGTC | 3 cut(s) | 604, 1880, 2351 |
| ScrFI | CCNGG | 6 cut(s) | 164, 382, 731, 1052, 1615, 2000 |
| SduI | GDGCHC | 4 cut(s) | 2570, 2703, 3408, 4152 |
| SfcI | CTRYAG | 3 cut(s) | 1520, 1879, 1903 |
| Sfr274I | CTCGAG | 2 cut(s) | 1351, 5141 |
| SfuI | TTCGAA | 1 cut(s) | 3665 |
| SinI | GGWCC | 8 cut(s) | 358, 1275, 1537, 1804, 2753, 3435, 4179, 4923 |
| SlaI | CTCGAG | 2 cut(s) | 1351, 5141 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 2217, 2708, 3312, 3413, 4056, 4157, 4800, 4901 |
| SpeI | ACTAGT | 4 cut(s) | 2741, 3446, 4190, 4934 |
| SphI | GCATGC | 1 cut(s) | 1819 |
| SseBI | AGGCCT | 1 cut(s) | 1433 |
| SspI | AATATT | 3 cut(s) | 388, 1484, 1983 |
| SspMI | CTAG | 8 cut(s) | 1631, 2742, 3243, 3447, 3987, 4191, 4731, 4935 |
| StuI | AGGCCT | 1 cut(s) | 1433 |
| StyD4I | CCNGG | 6 cut(s) | 162, 380, 729, 1050, 1613, 1998 |
| StyI | CCWWGG | 6 cut(s) | 56, 703, 735, 1778, 2522, 2778 |
| TaaI | ACNGT | 3 cut(s) | 346, 2219, 3934 |
| TaiI | ACGT | 8 cut(s) | 414, 772, 826, 993, 1182, 1722, 1926, 2613 |
| TaqII | GACCGA | 2 cut(s) | 4196, 4940 |
| TatI | WGTACW | 5 cut(s) | 659, 929, 1064, 4339, 4891 |
| TfiI | GAWTC | 6 cut(s) | 545, 955, 1118, 1461, 2762, 5150 |
| TseFI | GTSAC | 5 cut(s) | 499, 754, 797, 941, 1666 |
| TseI | GCWGC | 6 cut(s) | 406, 865, 1359, 2257, 4039, 4435 |
| Tsp45I | GTSAC | 5 cut(s) | 499, 754, 797, 941, 1666 |
| TspGWI | ACGGA | 5 cut(s) | 901, 1271, 2564, 3146, 3890 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4072 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 269 |
| VpaK11BI | GGWCC | 8 cut(s) | 358, 1275, 1537, 1804, 2753, 3435, 4179, 4923 |
| VspI | ATTAAT | 3 cut(s) | 875, 1232, 2771 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 734, 2576 |
| XceI | RCATGY | 1 cut(s) | 1819 |
| XhoI | CTCGAG | 2 cut(s) | 1351, 5141 |
| XmiI | GTMKAC | 3 cut(s) | 1095, 1902, 2649 |
| XmnI | GAANNNNTTC | 6 cut(s) | 2090, 2808, 2898, 3513, 4257, 5001 |
| XspI | CTAG | 8 cut(s) | 1631, 2742, 3243, 3447, 3987, 4191, 4731, 4935 |
| ZraI | GACGTC | 2 cut(s) | 770, 2611 |
| ZrmI | AGTACT | 2 cut(s) | 931, 1066 |
| Zsp2I | ATGCAT | 1 cut(s) | 1821 |