Prupe.4G109600_v2.0.a1

Cyclic nucleotide-gated ion channel 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
5745401 .. 5754190
8790 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G109600.1

Sequence Viewer

Length: 4731 bp
ATGGCTGACACAGAGGAAAGAGTTCCCCTCAGGAACACCCCTAGTGACGATTTACACGACGATGTTGAGGGGCAGCGTCGATGTCCAAGAAAAGGGCCAAGAATAGTAGCGAAGCGAATTCTCGACCAAACCCTGCGCGCCCTGATATGGCGGGATGAGATATTTGTACTTTTATGTGTGGTCGCAGTCTTGGTGGATCCTCTGTTCCTTTATATTCCGGTCACCAATGAGAACAGCAAGTGCCTTGGAGTGGACAAAGGGTTGAGGACTGTGGTTCTTGTTCTACGGTCACTTTTGGACATCATTTTCATAACGCATATTATACATCAAATTCGAAATCATAGTGAATTAATTGTGGTATCTGATGAGGCACCAGAAGGACAAAGATCATCGGGTTGGACAAGAAGGTCGCTGTTAACAATCATAGTTGACTTTCTTGCTGTTCTTCCCATCCCACAGTTGGCAATAGTAGTTGTCTTTTTCAGAACGAAAGACACTGGATATTTTCTAAGGAGAGAGATTTTGAGCGTCTTTCTCCTCTTCCAATATGGGCCAAACGTTTACCGGCTCAACCAATCTTTTAAGAAACTTCAACTCAAAGCAAGATTGGTCAAAGGTGCATTCAAATTTTTTCTCTACATCCTTGCAAGTTATGTACTTGGAGCTTTTTGGTACTTTTTCTCTATTCAACGAGAGACATCATGTTGGCACCAAGCTTGTAGCAATACAGAAGGATGCATAGCTACTTTATCCTGCAAGGATAATACTTCAACAAATATAACATTCCTAAATGAATTATGCCCTATAAGTCCATCAAATCCTACCCTATTTGACTTTGGAATATTTCTTGATGCCCTTGAATCTGGTAATACAGGAGAAGTAAATTTTTCAAGAAAATTCTTTTTCTCTTTCTGGTGGGGAATCCGAAATTTAAGTAACTTTGGCACGAATCTGGAAACAAGTAGCTACGTGTGGGAAAATTGCTTTGCAATTCTTATTTCCGTCATTGGATTGCTGCTCTTTTTATATCTCATTGGCATTATGCAGATATACATGCAGATCGCAGCCGCAAAAGCGGAAAAGAATAAGGATGACAAGTTAACACAGAAGATTAAGATGAAGGAGAAAGGTATAGTTGACTGGGTGTCAAATAATGGTCTCCCTCCGGATTTGAAGACAGAAATCATGGACTTCATAAAACAAAATAAGGTAGTGGAGAAACTGTACCAGAAAAAGAACAAGGCAGTGGAAGAAAACATGACTGCTGAGGTGGATGCGGAGTTTCTATTGTCTGTTCTTCCCGAGAATATCCAAACGTCTATAAAGCGGCACGTGGGCATGAACGCGCTAAATAAAGTACAAAGGCTTCATCATATGGATAAGAAAGTGTTGGAAATGATTTGCGACCATCTTAAGCCAATCATCTACCCTATCAATAGCTACGTTTTACGAAGGGGAAAAGCAATCGATTTGATGCTCTTCATCACAGACACAGACGGCACTATGCTGACCTACGAGGATCCGAAAACTGAAATCAAGAGACTTAAGAAGGATGATATTTTCGGAGACGAAATTCTAAGTTGGGTGTCACCGAGCATCTCTTTTGCTAATCTTCCAACTCCGAACTCAACTCTAAATGTCAAATGTGAAACAAAAGTGGAAGCCTTTGCTCTCATGGCCAAGGACTTGAGAAGTGTGGTTTCAGGATGCAGACATCTGTGGAACTGGACTTTATACAATTGTGACATTGAGTCTCAGGAATTTGAGGAGCTGGCACGTCCCATCGACAAGACTCATCAGACATATATACAGTTGTGGGAAGAGGAATTAAAATCTGTACAGAAGATTAAGATCGTGAAAGACATACGTGAGTGGGTGTTGAGAAATGGTCTCCCTGAGGATCTCCAGACAGAAATCATGGAAAAGATAGAAACAAGTAAAGTGGTGAAGGAAAACATAGGTGCTGGTGTGGATGTGAATTTCCTATTCTCTGTTCTTCCCAAGGGTATGATCAAGAGAGCAATAAAAGACCATGTCGGCGTTAATGCGCTGAAGAAAGTACCCATGCTTCAAAACAAGCTAGACTCCACGTTGAAATCTATCTGCAAATATCTCAAGCCAGTTATCTATGCTGAGAATAGCTACATTACCAGAGCAGGAAAACCGCTTAATTTGATGCTCTTCATTATCGATGGCATTATTACATGGACAGCCAACACCACAACCGACACCGCAACAGCGGGTTCCTCAATGGTCACCGAGCTCTCATGTCTTGAGAAAGGCGGTCTTTATGGAGAAGAACTTCTAAATTGGGTATCACCGAGCAGTAGCCTTTCGACACTTCCTATCTCGGCCCAAGATGTCAAGTGTCAAACAAAAGTGGAAGCCTTTGTTATCAATGCTGTGCAGTTAAAGATTGCAGTTTCGGAACTTGGAATGCTTTGGAAGAATTACTACACTAGTACCAATTCTCAGCTGGCACTTCCTAGCGACCAGACTTATCTGCAGATACAAAACGAGACATATTTGCAGTTGGGAGGTACAAGATTGGAGGAGATTGAGGATGAGGGTTCGAGGCAGAAGATGAAGATAATGATGAAGGAGAAAGATATACTTGAGTGGCTGTCAAGAAATGGTACCCACGAGGATTTAAAGACAAAAATCATGAGGCACATAAACCTTAAAAACATAGCGGAACAAAACATGGACGCCGATGTCGATTTGGGTTATCTGAATACTCACCTGCCCTTCGATCTCACAATTTCTTTAACGAAGCATCTCTGCATTAGTACCCTGAAGCAAGTGGCCATGCTTCAAAGTATGCATGAAGATATGTTCTCAAATATTTGCTACAAGCTGGAACCAGTGATCTATACCGAGAATAGCAACATTGTTCAAGCAGGAGAATCACTTGATTTGATGCTCATCATCATAGGAGGCACAATTATATGCACTGACATGACTAGCAATACCGAAGCAACAGATTCCGCGGTGATCACCAAATACCTTAACAAAGGTGATTTTTGTGGAGAAGAACTTCTCGCTTGGGCATCACCCAGCATCTTATTTTCAAGTCCTGCTCCTATCTCCACCCGAGATGTCAAATGTCAATCAAAAGTCGAAGCCTTCATTCTCAAAGCCGATAAGTTGAGAAGTCTAGTCTCCGAATACAGCTCTGAGTGGATTTCCAATTTCAACAACTGTAATAATTCAGAACAGATAGAAGAGTTGGCGCGTCGCCGCGACAAGATGGATCAAATACTTAATGAGACATATATGAAGTTCGGAACTACAGAACTGGAGGAGATTGAGGATGAGGAGTTAAAGCAGAAGGTGAAGATCATGATCAAGGAGAAAGATATACTTGCGTGGGTGTCAAGAAATGTCCTCGACGAGGATTTGAAGTCAAAAATTATGACGCACCTTAAATTAAATAACGTAATCCAAGAAAATCTTGATGCTAAAGTGGATGTGGAGTATCTCCATAGTCACCTACCCTTTGGTATTGCAATTTCTTTGACGAAACATCTCTGCATTAGTATGCTGAAGAATGTACCCATGCTTGAAAATATGCCTGAAGATATGTTCTCAAATATTTGCTACAAACTTGAGCCAGTGATCTACACCGAGAGTAGCAACATTGTTCAGGCAGGAGAACAACTTGATTTGATGCTCATCATTACTGAAGGCACAATTATATGTACCGATGTGACTAGCAATACTGGAACAACGGATTCCTCTGTTGTCACCAAGTACCTTAAGAAAGGTGATTTTTGTGGAGAAGAACTTCTCAGTTGGGCGTCACCCAACATCTTGTTTTCAGGTGCTGCTCCAATCTCAACCCGAGATGTCAAATGTCAAACAAAAGTAGAAGCTTTCGTTCTCAAAGTCGATAAGTTGAGAAGTCTAGTCTCCGAATACAGCTCTAAGTGGATTTCCAATTTCAACAATAGTTGTGACAATTCAGAACAGTTGGAGGAGTCGGCACTTCAGCCGGACAAGATTGATCAAATACTTAACGAGACATACAAGAAATTGGGAACTACAAAATTGGAGGAGATTGAGGATGAGGGGTTAAGGCAGACAGTGAAGATCATGATCAAGGAGAAAGATATACTTGAGTGGGTGTCAAGAAATGGTGTCCAAGAGGATTTGAAGACAAAAATCATGATGCACCTTAAATTAAATAACGTAATCCAAGAAAACCTTGATGCTGAAGTGGATGTAGAGTATCTCTATAGTCACCTACCCTTTGGTATTGCAATTTCTTTGACGAAACATCTCTGCATTAGTATGCTGAAGAAAGTACCCATGCTTCAAAGTATGCCTGAAGATATGTTCTCAAATATTTGCTACAAGCTTGAGCCAATGATCTATTTCGAGAATAGCAACGTTGTTCAAGCAGGAGAGTCACTTGATTTAATGCTCATCATTATAGAAGGCACAATTATATGCACCAAATATCTTGACCAAGGCAATACTGGAACAACGGATTCTGGGGTGATCACCAAATATCTTAAGAAAGGTGATTTTTGCGGAGAAGAACTTCTGAGTTGGGCATCACCCAACATCTTGTTTTCAGGTCCTGCTCCTCTCTCAACCGGAGAAGTCAAATGTCAAACAAAAGTAGAAGCCTTCGTCCTCAAAGCCGATAAGTTGAGAAGTCTGGTCTCCGAATACAGCTCTAAGTGGATTTCAAATTTCAACAATTCTGCAGTTGGAGGAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1577

Amino Acids

178.85

Weight (kDa)

5.52

Isoelectric Point (pI)

40.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2751
AasI GACNNNNNNGTC 2 cut(s) 406, 2714
Acc36I ACCTGC 1 cut(s) 2751
Acc65I GGTACC 1 cut(s) 2636
AccB1I GGYRCC 3 cut(s) 370, 708, 2636
AccII CGCG 5 cut(s) 138, 1346, 2990, 3235, 3243
AccIII TCCGGA 1 cut(s) 1165
AclI AACGTT 2 cut(s) 558, 4392
AclWI GGATC 6 cut(s) 191, 204, 1514, 1527, 1908, 3261
AcoI YGGCCR 2 cut(s) 1677, 2805
AcuI CTGAAG 9 cut(s) 2072, 2816, 3566, 3597, 3705, 3974, 4236, 4319, 4350
AcvI CACGTG 1 cut(s) 1333
AcyI GRCGYC 2 cut(s) 2709, 3800
AfiI CCNNNNNNNGG 5 cut(s) 92, 147, 250, 460, 3394
AflII CTTAAG 4 cut(s) 1412, 1544, 3758, 4517
AflIII ACRYGT 1 cut(s) 969
AhdI GACNNNNNGTC 2 cut(s) 1144, 1750
AhlI ACTAGT 1 cut(s) 2459
AjiI CACGTC 1 cut(s) 1778
AloI GAACNNNNNNTCC 2 cut(s) 188, 220
Alw21I GWGCWC 1 cut(s) 2265
AlwI GGATC 6 cut(s) 191, 204, 1514, 1527, 1908, 3261
AlwNI CAGNNNCTG 2 cut(s) 3827, 4586
Ama87I CYCGRG 3 cut(s) 1301, 3093, 3843
Aor13HI TCCGGA 1 cut(s) 1165
AoxI GGCC 5 cut(s) 95, 551, 1677, 2352, 2805
ApeKI GCWGC 4 cut(s) 73, 1015, 1064, 3827
AseI ATTAAT 1 cut(s) 350
Asp700I GAANNNNTTC 5 cut(s) 21, 2301, 3036, 3786, 4545
Asp718I GGTACC 1 cut(s) 2636
AspLEI GCGC 5 cut(s) 138, 140, 1348, 2050, 3235
AspS9I GGNCC 4 cut(s) 95, 551, 2353, 4583
AsuII TTCGAA 1 cut(s) 334
AvaI CYCGRG 3 cut(s) 1301, 3093, 3843
AvaII GGWCC 1 cut(s) 4583
AxyI CCTNAGG 2 cut(s) 29, 1896
BaeI ACNNNNGTAYC 2 cut(s) 2446, 2479
BalI TGGCCA 2 cut(s) 1679, 2807
BamHI GGATCC 2 cut(s) 196, 1519
BanI GGYRCC 3 cut(s) 370, 708, 2636
BanII GRGCYC 1 cut(s) 2265
BarI GAAGNNNNNNTAC 8 cut(s) 1350, 1382, 2052, 2084, 2438, 2470, 4299, 4331
BauI CACGAG 1 cut(s) 2642
BbrPI CACGTG 1 cut(s) 1333
BbsI GAAGAC 2 cut(s) 1181, 4163
Bbv12I GWGCWC 1 cut(s) 2265
BbvCI CCTCAGC 1 cut(s) 1266
BbvI GCAGC 4 cut(s) 85, 1002, 1076, 3814
BccI CCATC 6 cut(s) 458, 820, 1416, 1790, 2186, 3244
BceAI ACGGC 1 cut(s) 1513
BclI TGATCA 6 cut(s) 2010, 2994, 3345, 4006, 4098, 4503
BcuI ACTAGT 1 cut(s) 2459
BfaI CTAG 8 cut(s) 42, 2081, 2460, 2487, 2964, 3158, 3714, 3908
BfmI CTRYAG 4 cut(s) 2504, 3291, 4237, 4713
BfrI CTTAAG 4 cut(s) 1412, 1544, 3758, 4517
BfuAI ACCTGC 1 cut(s) 2751
BisI GCNGC 7 cut(s) 74, 1016, 1065, 1068, 1328, 3241, 3828
BlsI GCNGC 7 cut(s) 75, 1017, 1066, 1069, 1329, 3242, 3829
Bme18I GGWCC 1 cut(s) 4583
BmeRI GACNNNNNGTC 2 cut(s) 1144, 1750
BmeT110I CYCGRG 3 cut(s) 1301, 3093, 3843
BmgBI CACGTC 1 cut(s) 1778
BmgT120I GGNCC 4 cut(s) 95, 551, 2353, 4583
BmiI GGNNCC 7 cut(s) 198, 372, 710, 1521, 2245, 2638, 2862
BmrI ACTGGG 1 cut(s) 1150
BmuI ACTGGG 1 cut(s) 1150
BpiI GAAGAC 2 cut(s) 1181, 4163
BplI GAGNNNNNCTC 2 cut(s) 12, 44
BpmI CTGGAG 2 cut(s) 1889, 3320
Bpu10I CCTNAGC 1 cut(s) 1266
Bpu14I TTCGAA 1 cut(s) 334
BpuEI CTTGAG 7 cut(s) 1708, 2099, 2294, 2636, 3629, 4139, 4382
Bsa29I ATCGAT 2 cut(s) 1467, 2190
BsaAI YACGTR 3 cut(s) 970, 1333, 1868
BsaBI GATNNNNATC 5 cut(s) 1850, 2924, 3344, 3674, 4097
BsaHI GRCGYC 2 cut(s) 2709, 3800
BsaI GGTCTC 3 cut(s) 1163, 1895, 4675
BsaJI CCNNGG 5 cut(s) 244, 1680, 2001, 2988, 4471
BsaWI WCCGGW 3 cut(s) 217, 1165, 4601
BsaXI ACNNNNNCTCC 2 cut(s) 1208, 1238
Bsc4I CCNNNNNNNGG 5 cut(s) 92, 147, 250, 460, 3394
Bse118I RCCGGY 1 cut(s) 564
Bse1I ACTGG 9 cut(s) 502, 1145, 1730, 2120, 2864, 3303, 3614, 3727, 4486
Bse21I CCTNAGG 2 cut(s) 29, 1896
Bse8I GATNNNNATC 5 cut(s) 1850, 2924, 3344, 3674, 4097
BseAI TCCGGA 1 cut(s) 1165
BseCI ATCGAT 2 cut(s) 1467, 2190
BseDI CCNNGG 5 cut(s) 244, 1680, 2001, 2988, 4471
BseJI GATNNNNATC 5 cut(s) 1850, 2924, 3344, 3674, 4097
BseLI CCNNNNNNNGG 5 cut(s) 92, 147, 250, 460, 3394
BseMII CTCAG 9 cut(s) 43, 1257, 1769, 1887, 2124, 2486, 3168, 3805, 4541
BseNI ACTGG 9 cut(s) 502, 1145, 1730, 2120, 2864, 3303, 3614, 3727, 4486
BsePI GCGCGC 1 cut(s) 136
BseRI GAGGAG 8 cut(s) 527, 1781, 2567, 3317, 3332, 3992, 4070, 4581
BseXI GCAGC 4 cut(s) 85, 1002, 1076, 3814
BseYI CCCAGC 1 cut(s) 3056
BsgI GTGCAG 1 cut(s) 2426
Bsh1236I CGCG 5 cut(s) 138, 1346, 2990, 3235, 3243
BshFI GGCC 5 cut(s) 97, 553, 1679, 2354, 2807
BshNI GGYRCC 3 cut(s) 370, 708, 2636
BshVI ATCGAT 2 cut(s) 1467, 2190
BsiHKAI GWGCWC 1 cut(s) 2265
BsiHKCI CYCGRG 3 cut(s) 1301, 3093, 3843
BsiSI CCGG 5 cut(s) 218, 565, 1166, 3995, 4602
BslFI GGGAC 1 cut(s) 1764
BslI CCNNNNNNNGG 5 cut(s) 92, 147, 250, 460, 3394
BsmBI CGTCTC 1 cut(s) 1560
BsmFI GGGAC 1 cut(s) 1764
BsmI GAATGC 2 cut(s) 620, 2442
BsnI GGCC 5 cut(s) 97, 553, 1679, 2354, 2807
Bso31I GGTCTC 3 cut(s) 1163, 1895, 4675
BsoBI CYCGRG 3 cut(s) 1301, 3093, 3843
Bsp119I TTCGAA 1 cut(s) 334
Bsp1286I GDGCHC 1 cut(s) 2265
Bsp13I TCCGGA 1 cut(s) 1165
Bsp1407I TGTACA 1 cut(s) 1837
BspANI GGCC 5 cut(s) 97, 553, 1679, 2354, 2807
BspCNI CTCAG 9 cut(s) 42, 1258, 1768, 1888, 2125, 2485, 3169, 3804, 4542
BspDI ATCGAT 2 cut(s) 1467, 2190
BspEI TCCGGA 1 cut(s) 1165
BspFNI CGCG 5 cut(s) 138, 1346, 2990, 3235, 3243
BspHI TCATGA 4 cut(s) 2664, 3342, 4095, 4167
BspLI GGNNCC 7 cut(s) 198, 372, 710, 1521, 2245, 2638, 2862
BspMAI CTGCAG 2 cut(s) 2508, 4717
BspMI ACCTGC 1 cut(s) 2751
BspPI GGATC 6 cut(s) 191, 204, 1514, 1527, 1908, 3261
BspQI GCTCTTC 2 cut(s) 1484, 2186
BspT104I TTCGAA 1 cut(s) 334
BspT107I GGYRCC 3 cut(s) 370, 708, 2636
BspTI CTTAAG 4 cut(s) 1412, 1544, 3758, 4517
BspTNI GGTCTC 3 cut(s) 1163, 1895, 4675
BsrFI RCCGGY 1 cut(s) 564
BsrGI TGTACA 1 cut(s) 1837
BsrI ACTGG 9 cut(s) 502, 1145, 1730, 2120, 2864, 3303, 3614, 3727, 4486
BssAI RCCGGY 1 cut(s) 564
BssECI CCNNGG 5 cut(s) 244, 1680, 2001, 2988, 4471
BssHII GCGCGC 1 cut(s) 136
BssNI GRCGYC 2 cut(s) 2709, 3800
BssSI CACGAG 1 cut(s) 2642
BssT1I CCWWGG 4 cut(s) 244, 1680, 2001, 4471
Bst2BI CACGAG 1 cut(s) 2642
Bst4CI ACNGT 8 cut(s) 271, 288, 459, 1224, 1812, 3203, 3972, 4087
Bst6I CTCTTC 5 cut(s) 545, 1484, 1815, 2186, 3219
BstACI GRCGYC 2 cut(s) 2709, 3800
BstAFI CTTAAG 4 cut(s) 1412, 1544, 3758, 4517
BstAUI TGTACA 1 cut(s) 1837
BstBAI YACGTR 3 cut(s) 970, 1333, 1868
BstBI TTCGAA 1 cut(s) 334
BstC8I GCNNGC 3 cut(s) 138, 1773, 2478
BstDSI CCRYGG 1 cut(s) 2988
BstEII GGTNACC 2 cut(s) 220, 2254
BstENI CCTNNNNNAGG 1 cut(s) 3392
BstFNI CGCG 5 cut(s) 138, 1346, 2990, 3235, 3243
BstHHI GCGC 5 cut(s) 138, 140, 1348, 2050, 3235
BstMWI GCNNNNNNNGC 2 cut(s) 1073, 1676
BstNSI RCATGY 1 cut(s) 1057
BstPI GGTNACC 2 cut(s) 220, 2254
BstSFI CTRYAG 4 cut(s) 2504, 3291, 4237, 4713
BstUI CGCG 5 cut(s) 138, 1346, 2990, 3235, 3243
BstV1I GCAGC 4 cut(s) 85, 1002, 1076, 3814
BstV2I GAAGAC 2 cut(s) 1181, 4163
BstX2I RGATCY 3 cut(s) 196, 1519, 1900
BstYI RGATCY 3 cut(s) 196, 1519, 1900
Bsu15I ATCGAT 2 cut(s) 1467, 2190
Bsu36I CCTNAGG 2 cut(s) 29, 1896
BsuRI GGCC 5 cut(s) 97, 553, 1679, 2354, 2807
BsuTUI ATCGAT 2 cut(s) 1467, 2190
BtgI CCRYGG 1 cut(s) 2988
BtrI CACGTC 1 cut(s) 1778
BtsI GCAGTG 1 cut(s) 1251
BtsIMutI CAGTG 6 cut(s) 495, 1251, 2871, 2952, 3621, 4092
BveI ACCTGC 1 cut(s) 2751
Cac8I GCNNGC 3 cut(s) 138, 1773, 2478
CaiI CAGNNNCTG 2 cut(s) 3827, 4586
CciI TCATGA 4 cut(s) 2664, 3342, 4095, 4167
CfoI GCGC 5 cut(s) 138, 140, 1348, 2050, 3235
Cfr10I RCCGGY 1 cut(s) 564
Cfr13I GGNCC 4 cut(s) 95, 551, 2353, 4583
Cfr42I CCGCGG 1 cut(s) 2991
ClaI ATCGAT 2 cut(s) 1467, 2190
CseI GACGC 6 cut(s) 65, 517, 2717, 3224, 3427, 3789
CspCI CAANNNNNGTGG 2 cut(s) 1923, 1958
DraI TTTAAA 1 cut(s) 2652
DrdI GACNNNNNNGTC 2 cut(s) 406, 2714
DriI GACNNNNNGTC 2 cut(s) 1144, 1750
DseDI GACNNNNNNGTC 2 cut(s) 406, 2714
EaeI YGGCCR 2 cut(s) 1677, 2805
Eam1104I CTCTTC 5 cut(s) 545, 1484, 1815, 2186, 3219
Eam1105I GACNNNNNGTC 2 cut(s) 1144, 1750
EarI CTCTTC 5 cut(s) 545, 1484, 1815, 2186, 3219
Ecl136II GAGCTC 1 cut(s) 2263
Eco130I CCWWGG 4 cut(s) 244, 1680, 2001, 4471
Eco24I GRGCYC 1 cut(s) 2265
Eco31I GGTCTC 3 cut(s) 1163, 1895, 4675
Eco47I GGWCC 1 cut(s) 4583
Eco53kI GAGCTC 1 cut(s) 2263
Eco57I CTGAAG 9 cut(s) 2072, 2816, 3566, 3597, 3705, 3974, 4236, 4319, 4350
Eco72I CACGTG 1 cut(s) 1333
Eco81I CCTNAGG 2 cut(s) 29, 1896
Eco88I CYCGRG 3 cut(s) 1301, 3093, 3843
Eco91I GGTNACC 2 cut(s) 220, 2254
EcoICRI GAGCTC 1 cut(s) 2263
EcoNI CCTNNNNNAGG 1 cut(s) 3392
EcoO109I RGGNCCY 1 cut(s) 4583
EcoO65I GGTNACC 2 cut(s) 220, 2254
EcoRI GAATTC 1 cut(s) 117
EcoT14I CCWWGG 4 cut(s) 244, 1680, 2001, 4471
EcoT22I ATGCAT 2 cut(s) 740, 2826
EcoT38I GRGCYC 1 cut(s) 2265
ErhI CCWWGG 4 cut(s) 244, 1680, 2001, 4471
Esp3I CGTCTC 1 cut(s) 1560
FaqI GGGAC 1 cut(s) 1764
FauI CCCGC 2 cut(s) 144, 2233
FauNDI CATATG 1 cut(s) 1374
FbaI TGATCA 6 cut(s) 2010, 2994, 3345, 4006, 4098, 4503
Fnu4HI GCNGC 7 cut(s) 74, 1016, 1065, 1068, 1328, 3241, 3828
FriOI GRGCYC 1 cut(s) 2265
Fsp4HI GCNGC 7 cut(s) 74, 1016, 1065, 1068, 1328, 3241, 3828
FspBI CTAG 8 cut(s) 42, 2081, 2460, 2487, 2964, 3158, 3714, 3908
GlaI GCGC 5 cut(s) 137, 139, 1347, 2049, 3234
GluI GCNGC 7 cut(s) 74, 1016, 1065, 1068, 1328, 3241, 3828
GsaI CCCAGC 1 cut(s) 3060
GsuI CTGGAG 2 cut(s) 1889, 3320
HaeIII GGCC 5 cut(s) 97, 553, 1679, 2354, 2807
HapII CCGG 5 cut(s) 218, 565, 1166, 3995, 4602
HgaI GACGC 6 cut(s) 65, 517, 2717, 3224, 3427, 3789
HhaI GCGC 5 cut(s) 138, 140, 1348, 2050, 3235
Hin1I GRCGYC 2 cut(s) 2709, 3800
Hin6I GCGC 5 cut(s) 136, 138, 1346, 2048, 3233
HinP1I GCGC 5 cut(s) 136, 138, 1346, 2048, 3233
HincII GTYRAC 4 cut(s) 417, 430, 1101, 1138
HindII GTYRAC 4 cut(s) 417, 430, 1101, 1138
HindIII AAGCTT 3 cut(s) 714, 3873, 4358
HpaI GTTAAC 2 cut(s) 417, 1101
HpaII CCGG 5 cut(s) 218, 565, 1166, 3995, 4602
Hpy166II GTNNAC 6 cut(s) 253, 417, 430, 562, 1101, 1138
Hpy8I GTNNAC 6 cut(s) 253, 417, 430, 562, 1101, 1138
Hpy99I CGWCG 4 cut(s) 62, 81, 3240, 3395
HpyCH4III ACNGT 8 cut(s) 271, 288, 459, 1224, 1812, 3203, 3972, 4087
HpyF10VI GCNNNNNNNGC 2 cut(s) 1073, 1676
Hsp92I GRCGYC 2 cut(s) 2709, 3800
HspAI GCGC 5 cut(s) 136, 138, 1346, 2048, 3233
Kpn2I TCCGGA 1 cut(s) 1165
KpnI GGTACC 1 cut(s) 2640
Ksp22I TGATCA 6 cut(s) 2010, 2994, 3345, 4006, 4098, 4503
KspAI GTTAAC 2 cut(s) 417, 1101
KspI CCGCGG 1 cut(s) 2991
LguI GCTCTTC 2 cut(s) 1484, 2186
LmnI GCTCC 5 cut(s) 662, 1768, 3085, 3835, 4594
Lsp1109I GCAGC 4 cut(s) 85, 1002, 1076, 3814
MaeI CTAG 8 cut(s) 42, 2081, 2460, 2487, 2964, 3158, 3714, 3908
MfeI CAATTG 1 cut(s) 1738
MflI RGATCY 3 cut(s) 196, 1519, 1900
MhlI GDGCHC 1 cut(s) 2265
MlsI TGGCCA 2 cut(s) 1679, 2807
MluNI TGGCCA 2 cut(s) 1679, 2807
MlyI GAGTC 5 cut(s) 1760, 1786, 2078, 3989, 4418
MmeI TCCRAC 5 cut(s) 377, 1371, 1640, 3954, 4699
Mox20I TGGCCA 2 cut(s) 1679, 2807
Mph1103I ATGCAT 2 cut(s) 740, 2826
MroI TCCGGA 1 cut(s) 1165
MroXI GAANNNNTTC 5 cut(s) 21, 2301, 3036, 3786, 4545
MscI TGGCCA 2 cut(s) 1679, 2807
MslI CAYNNNNRTG 4 cut(s) 60, 2957, 3539, 4292
Msp20I TGGCCA 2 cut(s) 1679, 2807
MspA1I CMGCKG 3 cut(s) 2240, 2476, 2990
MspCI CTTAAG 4 cut(s) 1412, 1544, 3758, 4517
MspI CCGG 5 cut(s) 218, 565, 1166, 3995, 4602
MunI CAATTG 1 cut(s) 1738
Mva1269I GAATGC 2 cut(s) 620, 2442
MvnI CGCG 5 cut(s) 138, 1346, 2990, 3235, 3243
MwoI GCNNNNNNNGC 2 cut(s) 1073, 1676
NdeI CATATG 1 cut(s) 1374
NlaIV GGNNCC 7 cut(s) 198, 372, 710, 1521, 2245, 2638, 2862
NmeAIII GCCGAG 1 cut(s) 2330
NsiI ATGCAT 2 cut(s) 740, 2826
NspI RCATGY 1 cut(s) 1057
NspV TTCGAA 1 cut(s) 334
PagI TCATGA 4 cut(s) 2664, 3342, 4095, 4167
PaqCI CACCTGC 1 cut(s) 2751
PauI GCGCGC 1 cut(s) 136
PciSI GCTCTTC 2 cut(s) 1484, 2186
PcsI WCGNNNNNNNCGW 2 cut(s) 54, 2715
PctI GAATGC 2 cut(s) 620, 2442
PdmI GAANNNNTTC 5 cut(s) 21, 2301, 3036, 3786, 4545
PfeI GAWTC 7 cut(s) 860, 921, 949, 2906, 2984, 3734, 4493
PflFI GACNNNGTC 1 cut(s) 2033
PkrI GCNGC 7 cut(s) 75, 1017, 1066, 1069, 1329, 3242, 3829
PleI GAGTC 5 cut(s) 1759, 1786, 2078, 3988, 4417
PmaCI CACGTG 1 cut(s) 1333
PmlI CACGTG 1 cut(s) 1333
PpsI GAGTC 5 cut(s) 1759, 1786, 2078, 3988, 4417
Ppu21I YACGTR 3 cut(s) 970, 1333, 1868
PpuMI RGGWCCY 1 cut(s) 4583
PshBI ATTAAT 1 cut(s) 350
Psp124BI GAGCTC 1 cut(s) 2265
Psp1406I AACGTT 2 cut(s) 558, 4392
Psp5II RGGWCCY 1 cut(s) 4583
PspCI CACGTG 1 cut(s) 1333
PspEI GGTNACC 2 cut(s) 220, 2254
PspFI CCCAGC 1 cut(s) 3056
PspN4I GGNNCC 7 cut(s) 198, 372, 710, 1521, 2245, 2638, 2862
PspPI GGNCC 4 cut(s) 95, 551, 2353, 4583
PspPPI RGGWCCY 1 cut(s) 4583
PstI CTGCAG 2 cut(s) 2508, 4717
PstNI CAGNNNCTG 2 cut(s) 3827, 4586
PsuI RGATCY 3 cut(s) 196, 1519, 1900
PsyI GACNNNGTC 1 cut(s) 2033
PteI GCGCGC 1 cut(s) 136
PvuII CAGCTG 1 cut(s) 2476
RseI CAYNNNNRTG 4 cut(s) 60, 2957, 3539, 4292
SacI GAGCTC 1 cut(s) 2265
SacII CCGCGG 1 cut(s) 2991
SapI GCTCTTC 2 cut(s) 1484, 2186
SatI GCNGC 7 cut(s) 74, 1016, 1065, 1068, 1328, 3241, 3828
Sau96I GGNCC 4 cut(s) 95, 551, 2353, 4583
SchI GAGTC 5 cut(s) 1760, 1786, 2078, 3989, 4418
SduI GDGCHC 1 cut(s) 2265
SfcI CTRYAG 4 cut(s) 2504, 3291, 4237, 4713
Sfr303I CCGCGG 1 cut(s) 2991
SfuI TTCGAA 1 cut(s) 334
SgrBI CCGCGG 1 cut(s) 2991
SinI GGWCC 1 cut(s) 4583
SmiMI CAYNNNNRTG 4 cut(s) 60, 2957, 3539, 4292
SpeI ACTAGT 1 cut(s) 2459
SspI AATATT 4 cut(s) 843, 2845, 3595, 4348
SspMI CTAG 8 cut(s) 42, 2081, 2460, 2487, 2964, 3158, 3714, 3908
SstI GAGCTC 1 cut(s) 2265
StyI CCWWGG 4 cut(s) 244, 1680, 2001, 4471
TaaI ACNGT 8 cut(s) 271, 288, 459, 1224, 1812, 3203, 3972, 4087
TatI WGTACW 4 cut(s) 166, 655, 1357, 1837
TauI GCSGC 3 cut(s) 1070, 1330, 3243
TfiI GAWTC 7 cut(s) 860, 921, 949, 2906, 2984, 3734, 4493
TscAI CASTG 6 cut(s) 502, 1251, 2871, 2959, 3621, 4092
TseI GCWGC 4 cut(s) 73, 1015, 1064, 3827
TspGWI ACGGA 3 cut(s) 991, 3746, 4505
TspRI CASTG 6 cut(s) 502, 1251, 2871, 2959, 3621, 4092
Tth111I GACNNNGTC 1 cut(s) 2033
Vha464I CTTAAG 4 cut(s) 1412, 1544, 3758, 4517
VpaK11BI GGWCC 1 cut(s) 4583
VspI ATTAAT 1 cut(s) 350
XagI CCTNNNNNAGG 1 cut(s) 3392
XceI RCATGY 1 cut(s) 1057
XcmI CCANNNNNNNNNTGG 3 cut(s) 457, 2473, 4478
XmnI GAANNNNTTC 5 cut(s) 21, 2301, 3036, 3786, 4545
XspI CTAG 8 cut(s) 42, 2081, 2460, 2487, 2964, 3158, 3714, 3908
Zsp2I ATGCAT 2 cut(s) 740, 2826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.