Cotton fibre expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15385 |
| fragaria_vesca | FvH4_3g45180 FvH4_3g45190 FvH4_6g30170 |
| malus_domestica | MD17G1207500.v1.1 |
| prunus_persica | Prupe.3G082000_v2.0.a1 Prupe.6G009300_v2.0.a1 |
| pyrus_communis | pycom03g00790 pycom17g21010 |
| rosa_chinensis | RchiOBHm_Chr2g0136401 |
| rosa_laevigata | RLG00000019528 RLG00000036989 |
| rosa_multiflora | Rmu_sc0001381.1_g000022 Rmu_sc0001381.1_g000023 Rmu_sc0001998.1_g000013 Rmu_sc0011683.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00001650 Rroxscaffold_2G00108320 |
| rosa_rugosa | Rorug02G0329900 Rorug03G0305500.1 Rorug05G0477900 Rorug05G0479800 |
| rosa_samantha | Rh2AG381100 Rh2BG387900 Rh2CG367100 Rh2DG404300 Rh5AG530100 Rh5BG557000 Rh5CG579800 |
| rosa_wichuraiana | Rw5G049510 Rw5G049520 Rw5G049590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 173, 190 |
| AluBI | AGCT | 1 cut(s) | 163 |
| AluI | AGCT | 1 cut(s) | 163 |
| ApeKI | GCWGC | 2 cut(s) | 23, 98 |
| AseI | ATTAAT | 1 cut(s) | 120 |
| AsuHPI | GGTGA | 1 cut(s) | 91 |
| BauI | CACGAG | 1 cut(s) | 213 |
| BbvI | GCAGC | 2 cut(s) | 10, 110 |
| BciVI | GTATCC | 1 cut(s) | 36 |
| BfuI | GTATCC | 1 cut(s) | 36 |
| BisI | GCNGC | 2 cut(s) | 24, 99 |
| BlsI | GCNGC | 2 cut(s) | 25, 100 |
| BmsI | GCATC | 1 cut(s) | 124 |
| Bse1I | ACTGG | 1 cut(s) | 27 |
| BseGI | GGATG | 1 cut(s) | 96 |
| BseNI | ACTGG | 1 cut(s) | 27 |
| BseXI | GCAGC | 2 cut(s) | 10, 110 |
| BsmI | GAATGC | 1 cut(s) | 100 |
| BsrI | ACTGG | 1 cut(s) | 27 |
| BssSI | CACGAG | 1 cut(s) | 213 |
| Bst2BI | CACGAG | 1 cut(s) | 213 |
| Bst4CI | ACNGT | 1 cut(s) | 195 |
| BstF5I | GGATG | 1 cut(s) | 96 |
| BstV1I | GCAGC | 2 cut(s) | 10, 110 |
| BsuI | GTATCC | 1 cut(s) | 36 |
| BtsCI | GGATG | 1 cut(s) | 96 |
| BtsIMutI | CAGTG | 1 cut(s) | 34 |
| CviJI | RGCY | 4 cut(s) | 36, 101, 131, 163 |
| CviKI_1 | RGCY | 4 cut(s) | 36, 101, 131, 163 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 99 |
| FokI | GGATG | 1 cut(s) | 103 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 99 |
| GluI | GCNGC | 2 cut(s) | 24, 99 |
| HinfI | GANTC | 2 cut(s) | 169, 182 |
| HphI | GGTGA | 1 cut(s) | 91 |
| Hpy166II | GTNNAC | 1 cut(s) | 82 |
| Hpy188I | TCNGA | 1 cut(s) | 155 |
| Hpy188III | TCNNGA | 3 cut(s) | 14, 145, 200 |
| Hpy8I | GTNNAC | 1 cut(s) | 82 |
| Hpy99I | CGWCG | 1 cut(s) | 15 |
| HpyAV | CCTTC | 1 cut(s) | 148 |
| HpyCH4III | ACNGT | 1 cut(s) | 195 |
| HpyCH4V | TGCA | 1 cut(s) | 98 |
| LpnPI | CCDG | 4 cut(s) | 40, 70, 173, 185 |
| Lsp1109I | GCAGC | 2 cut(s) | 10, 110 |
| LweI | GCATC | 1 cut(s) | 124 |
| MboII | GAAGA | 1 cut(s) | 191 |
| MluCI | AATT | 1 cut(s) | 204 |
| MnlI | CCTC | 2 cut(s) | 10, 81 |
| MseI | TTAA | 1 cut(s) | 120 |
| Mva1269I | GAATGC | 1 cut(s) | 100 |
| PctI | GAATGC | 1 cut(s) | 100 |
| PfeI | GAWTC | 2 cut(s) | 169, 182 |
| PkrI | GCNGC | 2 cut(s) | 25, 100 |
| PshBI | ATTAAT | 1 cut(s) | 120 |
| SaqAI | TTAA | 1 cut(s) | 120 |
| SatI | GCNGC | 2 cut(s) | 24, 99 |
| SetI | ASST | 3 cut(s) | 21, 81, 165 |
| SfaNI | GCATC | 1 cut(s) | 124 |
| SgeI | CNNG | 7 cut(s) | 26, 39, 97, 122, 157, 172, 212 |
| Sse9I | AATT | 1 cut(s) | 204 |
| TaaI | ACNGT | 1 cut(s) | 195 |
| TaqI | TCGA | 1 cut(s) | 13 |
| TasI | AATT | 1 cut(s) | 204 |
| TfiI | GAWTC | 2 cut(s) | 169, 182 |
| Tru1I | TTAA | 1 cut(s) | 120 |
| Tru9I | TTAA | 1 cut(s) | 120 |
| TscAI | CASTG | 1 cut(s) | 34 |
| TseI | GCWGC | 2 cut(s) | 23, 98 |
| TspDTI | ATGAA | 3 cut(s) | 107, 130, 138 |
| TspRI | CASTG | 1 cut(s) | 34 |
| VspI | ATTAAT | 1 cut(s) | 120 |