Cotton fibre expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15385 |
| fragaria_vesca | FvH4_3g45180 FvH4_3g45190 FvH4_6g30170 |
| malus_domestica | MD17G1207500.v1.1 |
| prunus_persica | Prupe.3G082000_v2.0.a1 Prupe.6G009300_v2.0.a1 |
| pyrus_communis | pycom03g00790 pycom17g21010 |
| rosa_chinensis | RchiOBHm_Chr2g0136401 |
| rosa_laevigata | RLG00000019528 RLG00000036989 |
| rosa_multiflora | Rmu_sc0001381.1_g000022 Rmu_sc0001381.1_g000023 Rmu_sc0001998.1_g000013 Rmu_sc0011683.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00001650 Rroxscaffold_2G00108320 |
| rosa_rugosa | Rorug02G0329900 Rorug03G0305500.1 Rorug05G0477900 Rorug05G0479800 |
| rosa_samantha | Rh2AG381100 Rh2BG387900 Rh2CG367100 Rh2DG404300 Rh5AG530100 Rh5BG557000 Rh5CG579800 |
| rosa_wichuraiana | Rw5G049510 Rw5G049520 Rw5G049590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 107 |
| AgsI | TTSAA | 2 cut(s) | 179, 196 |
| AluBI | AGCT | 1 cut(s) | 169 |
| AluI | AGCT | 1 cut(s) | 169 |
| ApeKI | GCWGC | 2 cut(s) | 23, 104 |
| AseI | ATTAAT | 1 cut(s) | 126 |
| BauI | CACGAG | 1 cut(s) | 219 |
| BbvI | GCAGC | 2 cut(s) | 10, 116 |
| BccI | CCATC | 2 cut(s) | 43, 94 |
| BisI | GCNGC | 2 cut(s) | 24, 105 |
| BlsI | GCNGC | 2 cut(s) | 25, 106 |
| BmiI | GGNNCC | 1 cut(s) | 164 |
| BmsI | GCATC | 1 cut(s) | 130 |
| BpuEI | CTTGAG | 1 cut(s) | 155 |
| Bsa29I | ATCGAT | 1 cut(s) | 63 |
| Bse1I | ACTGG | 1 cut(s) | 41 |
| BseCI | ATCGAT | 1 cut(s) | 63 |
| BseGI | GGATG | 3 cut(s) | 10, 102, 115 |
| BseNI | ACTGG | 1 cut(s) | 41 |
| BseXI | GCAGC | 2 cut(s) | 10, 116 |
| BsgI | GTGCAG | 1 cut(s) | 65 |
| BshVI | ATCGAT | 1 cut(s) | 63 |
| BspACI | CCGC | 1 cut(s) | 107 |
| BspDI | ATCGAT | 1 cut(s) | 63 |
| BspLI | GGNNCC | 1 cut(s) | 164 |
| BsrI | ACTGG | 1 cut(s) | 41 |
| BssSI | CACGAG | 1 cut(s) | 219 |
| Bst2BI | CACGAG | 1 cut(s) | 219 |
| BstF5I | GGATG | 3 cut(s) | 10, 102, 115 |
| BstV1I | GCAGC | 2 cut(s) | 10, 116 |
| Bsu15I | ATCGAT | 1 cut(s) | 63 |
| BsuTUI | ATCGAT | 1 cut(s) | 63 |
| BtsCI | GGATG | 3 cut(s) | 10, 102, 115 |
| BtsIMutI | CAGTG | 1 cut(s) | 48 |
| ClaI | ATCGAT | 1 cut(s) | 63 |
| CviJI | RGCY | 2 cut(s) | 137, 169 |
| CviKI_1 | RGCY | 2 cut(s) | 137, 169 |
| Eco32I | GATATC | 1 cut(s) | 61 |
| EcoRV | GATATC | 1 cut(s) | 61 |
| FaiI | YATR | 1 cut(s) | 134 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 105 |
| FokI | GGATG | 3 cut(s) | 17, 109, 122 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 105 |
| GluI | GCNGC | 2 cut(s) | 24, 105 |
| HinfI | GANTC | 2 cut(s) | 175, 188 |
| Hpy188III | TCNNGA | 5 cut(s) | 14, 151, 160, 172, 206 |
| HpyAV | CCTTC | 2 cut(s) | 87, 154 |
| HpyCH4V | TGCA | 1 cut(s) | 46 |
| LpnPI | CCDG | 5 cut(s) | 54, 65, 145, 179, 191 |
| Lsp1109I | GCAGC | 2 cut(s) | 10, 116 |
| LweI | GCATC | 1 cut(s) | 130 |
| MboII | GAAGA | 1 cut(s) | 197 |
| MnlI | CCTC | 1 cut(s) | 10 |
| MseI | TTAA | 2 cut(s) | 126, 229 |
| MspA1I | CMGCKG | 1 cut(s) | 107 |
| NlaIV | GGNNCC | 1 cut(s) | 164 |
| PfeI | GAWTC | 2 cut(s) | 175, 188 |
| PkrI | GCNGC | 2 cut(s) | 25, 106 |
| PshBI | ATTAAT | 1 cut(s) | 126 |
| PspN4I | GGNNCC | 1 cut(s) | 164 |
| SaqAI | TTAA | 2 cut(s) | 126, 229 |
| SatI | GCNGC | 2 cut(s) | 24, 105 |
| SetI | ASST | 4 cut(s) | 21, 84, 171, 203 |
| SfaNI | GCATC | 1 cut(s) | 130 |
| SmlI | CTYRAG | 1 cut(s) | 170 |
| SmoI | CTYRAG | 1 cut(s) | 170 |
| SsiI | CCGC | 1 cut(s) | 107 |
| TaqI | TCGA | 2 cut(s) | 13, 63 |
| TfiI | GAWTC | 2 cut(s) | 175, 188 |
| Tru1I | TTAA | 2 cut(s) | 126, 229 |
| Tru9I | TTAA | 2 cut(s) | 126, 229 |
| TscAI | CASTG | 1 cut(s) | 48 |
| TseI | GCWGC | 2 cut(s) | 23, 104 |
| TspDTI | ATGAA | 1 cut(s) | 136 |
| TspRI | CASTG | 1 cut(s) | 48 |
| VspI | ATTAAT | 1 cut(s) | 126 |