Prupe.6G106700_v2.0.a1
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
7584298 .. 7588492
4195 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G106700.1

Sequence Viewer

Length: 1884 bp
ATGATCAGGAGCCCGAAGATGATTGTGAGAAATCCAACGGGAAAATCACGGAAGAAGTTAACTTTGCAGATAATGAAAAGAAGAGAGAAATTCTTTGAGGATGACAAAATGGGTGAGGCAGCTAAGAGATTTCAATGCTCTGAAGACAGCGACGTTGACAACAATGGAGAAGGGGATAAAAAGAAAATGAAGAAGAAAGAGAAGAGAGAAAAGGTAGATGGTGAATGGGTACAGAAGATCATAACTGATGGAAAGGAGGCTGGAGTAGAAAGTGAGCACTCAGATGGGAAAATTATGGAGAAGGGTGGATTCATGAAGAAAGAGAAAAGAAACCATAGAAAGAAGTCAGGAAGTCAAATGCGGGAAACTGTGGTTGAGAAACTGGGCACAGAAAGCAGTAGAATTGAAGGAAATAATTTCTTAGAGAATGACGGTAATGTACAGACAACTGGAGATGAGACAAGCAACAGTAACATAGAGGTTGTGTATGTAGAAGACAGTAATAAAAGGAAGAAGAGGGCCACGTCAAAGAAACATGTTAATGTAGGGGATTGCAACGAAGATGAAAAGGAAATAAACAAGTCAGATAAAGGAAGTCTAAAAACCCCAAAAAATATTAGGGCTCCCGATCTTTCTGAAAATTCTACACCTAGAAAACCATCAAAAAGAGTGAGTTTTTCTGATGATGTGCAGGTTGTGTATGTAGAAGACAGTAATAAAAGGAAGAAGAGGGCCAAGTCAAAGAAACATGTCAATGTAGGGGACTGCAATGAAGACAAAAAGGAAATAGCCAAGTCAGATGAAGGAAGTCTAAAAGCCCAAAAAAATGTTAGGGCTCCAAATCTTTCTGAAAAATCTACACCTAGAAAACCATCAAAAAGAGTAAGTTTTTCTGATGATGTGCAGGTCTTTCCCCAATGTGATGCCCCAAAAGATGCAGAAAATGGCTTAGTACAAGGTAAGCGGTTTTCAGAAGAAGAAGACAAGCTTGTAAAAGAGGCTGTTTTAACATACATAGAGGAACATCGCTTAGGTGATGAAGGCATCGACAAGGTACTCAATTGTAGATCCAATCCCCAAGTCAAAAATTGTTGGAAGGATATTGGGGCAGCCTTACCCTGGAGGCCTTCTAAGAGCATATATTATCGAGCTCATATTTTATTTGAACAAGGAAAGGAACGTAATTGGACCCCCGAAGAGTATGAAGAAGTAAGACGTGCCGCCATGGAATCTAAGGATAAAGGTGAAGCCAAACCCAATTGGAGAAAGGTGGGTAATGAACTGGGCAAACATAGAATTCATGTCAAGGATGCATGGCGTAGAATCAAACTGCCAAACATGAAGAAAGGACATTGGTCCCAAGAGGAGTACAAGACTTTATTTGATTTAGTGAATAAGGATCTGCAGATGAGGACGTTGGAAGAAAAGAAATCCAAGCATGGCATGCTGCGAGATAATATCAAGTGGGAGTCAATTAGTGAGACTTTAGGCACCAGAACGAATCCCGCTTGCTGCCAGAAGTGGTATTACCAATTAACATCACCTTTGGTAGCTGAAGGTGTGTGGGCTGATGCTGATGACTATGGCCTACTTTATGCTCTTGATAGCTTGGATGCTTGTTGCATGGAAGACGTTGATTGGGATAATGTTCTTGAGCAAAGGTCTGGAGATGTTTGTCGTAAGCGATGGAATCAAATGGTCAAACACATTGGTCAGTATGGGACTAAGTCCTTTGCTGAAAAAGTTGAAATTTTGTCGAAACGTTATTGTGCTGATGCACTTGAAGCAAGAGCAGTCTTCGATAGTAAGCCTGCAGTTGACTCAGGTTTATTTGGCATCAAAGTAGCGGATGTACTTGGAACAAGGGAGGAGGCTCTATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

628

Amino Acids

71.84

Weight (kDa)

9.04

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 682, 895
AccB1I GGYRCC 1 cut(s) 1490
AciI CCGC 5 cut(s) 361, 964, 1221, 1506, 1847
AclI AACGTT 1 cut(s) 1762
AclWI GGATC 2 cut(s) 1062, 1407
AcsI RAATTY 4 cut(s) 89, 640, 1296, 1749
AcuI CTGAAG 2 cut(s) 162, 1575
AfaI GTAC 6 cut(s) 231, 441, 954, 1056, 1370, 1854
AfiI CCNNNNNNNGG 1 cut(s) 1119
AflIII ACRYGT 2 cut(s) 535, 748
AgsI TTSAA 5 cut(s) 134, 407, 1166, 1748, 1784
AjiI CACGTC 2 cut(s) 525, 1217
AjnI CCWGG 1 cut(s) 1118
AluBI AGCT 5 cut(s) 122, 988, 1151, 1553, 1608
AluI AGCT 5 cut(s) 122, 988, 1151, 1553, 1608
Alw21I GWGCWC 2 cut(s) 279, 1153
Alw26I GTCTC 2 cut(s) 452, 1475
AlwI GGATC 2 cut(s) 1062, 1407
AoxI GGCC 4 cut(s) 519, 732, 1124, 1585
ApeKI GCWGC 4 cut(s) 119, 1109, 1447, 1512
ApoI RAATTY 4 cut(s) 89, 640, 1296, 1749
AspS9I GGNCC 4 cut(s) 519, 732, 1188, 1356
AsuHPI GGTGA 5 cut(s) 125, 233, 1046, 1256, 1533
AvaII GGWCC 2 cut(s) 1188, 1356
BaeGI GKGCMC 1 cut(s) 389
BanI GGYRCC 1 cut(s) 1490
BanII GRGCYC 4 cut(s) 14, 625, 838, 1153
BarI GAAGNNNNNNTAC 2 cut(s) 1511, 1543
BbsI GAAGAC 7 cut(s) 150, 501, 714, 780, 987, 1635, 1789
Bbv12I GWGCWC 2 cut(s) 279, 1153
BbvI GCAGC 4 cut(s) 131, 1121, 1434, 1499
BccI CCATC 6 cut(s) 212, 242, 278, 667, 880, 1680
BciT130I CCWGG 1 cut(s) 1120
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 2 cut(s) 452, 1475
BfaI CTAG 2 cut(s) 651, 864
BfmI CTRYAG 2 cut(s) 1403, 1812
BfuAI ACCTGC 2 cut(s) 682, 895
BisI GCNGC 5 cut(s) 120, 1110, 1221, 1448, 1513
BlsI GCNGC 5 cut(s) 121, 1111, 1222, 1449, 1514
Bme1390I CCNGG 1 cut(s) 1120
Bme18I GGWCC 2 cut(s) 1188, 1356
BmgBI CACGTC 2 cut(s) 525, 1217
BmgT120I GGNCC 4 cut(s) 519, 732, 1188, 1356
BmiI GGNNCC 6 cut(s) 11, 624, 837, 1190, 1358, 1492
BmrFI CCNGG 1 cut(s) 1120
BmrI ACTGGG 2 cut(s) 392, 1292
BmsI GCATC 8 cut(s) 913, 925, 1053, 1300, 1561, 1603, 1765, 1845
BmuI ACTGGG 2 cut(s) 392, 1292
BoxI GACNNNNGTC 1 cut(s) 1354
BpiI GAAGAC 7 cut(s) 150, 501, 714, 780, 987, 1635, 1789
BpmI CTGGAG 4 cut(s) 282, 471, 1141, 1686
Bpu10I CCTNAGC 1 cut(s) 1030
BpuEI CTTGAG 1 cut(s) 1673
BsaJI CCNNGG 2 cut(s) 1118, 1224
Bsc4I CCNNNNNNNGG 1 cut(s) 1119
Bse1I ACTGG 3 cut(s) 387, 454, 1287
Bse3DI GCAATG 1 cut(s) 775
BseBI CCWGG 1 cut(s) 1120
BseDI CCNNGG 2 cut(s) 1118, 1224
BseGI GGATG 4 cut(s) 106, 1315, 1618, 1855
BseLI CCNNNNNNNGG 1 cut(s) 1119
BseMI GCAATG 1 cut(s) 775
BseMII CTCAG 2 cut(s) 294, 1836
BseNI ACTGG 3 cut(s) 387, 454, 1287
BseRI GAGGAG 2 cut(s) 1379, 1883
BseSI GKGCMC 1 cut(s) 389
BseXI GCAGC 4 cut(s) 131, 1121, 1434, 1499
BsgI GTGCAG 2 cut(s) 710, 923
BshFI GGCC 4 cut(s) 521, 734, 1126, 1587
BshNI GGYRCC 1 cut(s) 1490
BsiHKAI GWGCWC 2 cut(s) 279, 1153
BslFI GGGAC 3 cut(s) 776, 1342, 1735
BslI CCNNNNNNNGG 1 cut(s) 1119
BsmAI GTCTC 2 cut(s) 452, 1475
BsmFI GGGAC 3 cut(s) 776, 1342, 1735
BsnI GGCC 4 cut(s) 521, 734, 1126, 1587
Bsp1286I GDGCHC 6 cut(s) 14, 279, 389, 625, 838, 1153
Bsp1407I TGTACA 1 cut(s) 439
Bsp143I GATC 5 cut(s) 3, 237, 628, 1067, 1399
Bsp19I CCATGG 1 cut(s) 1224
BspACI CCGC 5 cut(s) 361, 964, 1221, 1506, 1847
BspANI GGCC 4 cut(s) 521, 734, 1126, 1587
BspCNI CTCAG 2 cut(s) 293, 1835
BspHI TCATGA 1 cut(s) 312
BspLI GGNNCC 6 cut(s) 11, 624, 837, 1190, 1358, 1492
BspMAI CTGCAG 2 cut(s) 1407, 1816
BspMI ACCTGC 2 cut(s) 682, 895
BspPI GGATC 2 cut(s) 1062, 1407
BspT107I GGYRCC 1 cut(s) 1490
BsrDI GCAATG 1 cut(s) 775
BsrGI TGTACA 1 cut(s) 439
BsrI ACTGG 3 cut(s) 387, 454, 1287
BssECI CCNNGG 2 cut(s) 1118, 1224
BssMI GATC 5 cut(s) 3, 237, 628, 1067, 1399
BssT1I CCWWGG 1 cut(s) 1224
Bst2UI CCWGG 1 cut(s) 1120
Bst4CI ACNGT 5 cut(s) 370, 434, 470, 500, 713
Bst6I CTCTTC 5 cut(s) 76, 197, 509, 722, 1191
BstAPI GCANNNNNTGC 1 cut(s) 1444
BstAUI TGTACA 1 cut(s) 439
BstC8I GCNNGC 3 cut(s) 1445, 1510, 1812
BstDEI CTNAG 9 cut(s) 123, 280, 421, 949, 1030, 1131, 1233, 1725, 1822
BstDSI CCRYGG 1 cut(s) 1224
BstF5I GGATG 4 cut(s) 106, 1315, 1618, 1855
BstKTI GATC 5 cut(s) 6, 240, 631, 1070, 1402
BstMAI GTCTC 2 cut(s) 452, 1475
BstMBI GATC 5 cut(s) 3, 237, 628, 1067, 1399
BstMWI GCNNNNNNNGC 3 cut(s) 393, 1444, 1784
BstNI CCWGG 1 cut(s) 1120
BstNSI RCATGY 3 cut(s) 539, 752, 1447
BstPAI GACNNNNGTC 1 cut(s) 1354
BstSCI CCNGG 1 cut(s) 1118
BstSFI CTRYAG 2 cut(s) 1403, 1812
BstSLI GKGCMC 1 cut(s) 389
BstV1I GCAGC 4 cut(s) 131, 1121, 1434, 1499
BstV2I GAAGAC 7 cut(s) 150, 501, 714, 780, 987, 1635, 1789
BstX2I RGATCY 2 cut(s) 1067, 1399
BstYI RGATCY 2 cut(s) 1067, 1399
BsuRI GGCC 4 cut(s) 521, 734, 1126, 1587
BtgI CCRYGG 1 cut(s) 1224
BtgZI GCGATG 2 cut(s) 1010, 1699
BtrI CACGTC 2 cut(s) 525, 1217
BtsCI GGATG 4 cut(s) 106, 1315, 1618, 1855
BveI ACCTGC 2 cut(s) 682, 895
Cac8I GCNNGC 3 cut(s) 1445, 1510, 1812
CciI TCATGA 1 cut(s) 312
Cfr13I GGNCC 4 cut(s) 519, 732, 1188, 1356
Csp6I GTAC 6 cut(s) 230, 440, 953, 1055, 1369, 1853
CviQI GTAC 6 cut(s) 230, 440, 953, 1055, 1369, 1853
DdeI CTNAG 9 cut(s) 123, 280, 421, 949, 1030, 1131, 1233, 1725, 1822
DpnI GATC 5 cut(s) 5, 239, 630, 1069, 1401
DpnII GATC 5 cut(s) 3, 237, 628, 1067, 1399
Eam1104I CTCTTC 5 cut(s) 76, 197, 509, 722, 1191
EarI CTCTTC 5 cut(s) 76, 197, 509, 722, 1191
Ecl136II GAGCTC 1 cut(s) 1151
Eco130I CCWWGG 1 cut(s) 1224
Eco147I AGGCCT 1 cut(s) 1126
Eco24I GRGCYC 4 cut(s) 14, 625, 838, 1153
Eco47I GGWCC 2 cut(s) 1188, 1356
Eco53kI GAGCTC 1 cut(s) 1151
Eco57I CTGAAG 2 cut(s) 162, 1575
EcoICRI GAGCTC 1 cut(s) 1151
EcoRI GAATTC 1 cut(s) 1296
EcoRII CCWGG 1 cut(s) 1118
EcoT14I CCWWGG 1 cut(s) 1224
EcoT22I ATGCAT 1 cut(s) 1315
EcoT38I GRGCYC 4 cut(s) 14, 625, 838, 1153
ErhI CCWWGG 1 cut(s) 1224
FalI AAGNNNNNCTT 2 cut(s) 972, 1004
FaqI GGGAC 3 cut(s) 776, 1342, 1735
FauI CCCGC 2 cut(s) 354, 1513
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 5 cut(s) 120, 1110, 1221, 1448, 1513
FokI GGATG 4 cut(s) 113, 1322, 1625, 1862
FriOI GRGCYC 4 cut(s) 14, 625, 838, 1153
Fsp4HI GCNGC 5 cut(s) 120, 1110, 1221, 1448, 1513
FspBI CTAG 2 cut(s) 651, 864
GluI GCNGC 5 cut(s) 120, 1110, 1221, 1448, 1513
GsuI CTGGAG 4 cut(s) 282, 471, 1141, 1686
HaeIII GGCC 4 cut(s) 521, 734, 1126, 1587
HincII GTYRAC 3 cut(s) 60, 157, 1819
HindII GTYRAC 3 cut(s) 60, 157, 1819
HindIII AAGCTT 1 cut(s) 986
HinfI GANTC 7 cut(s) 309, 1229, 1323, 1469, 1501, 1690, 1820
HpaI GTTAAC 1 cut(s) 60
HphI GGTGA 5 cut(s) 125, 233, 1046, 1256, 1533
Hpy166II GTNNAC 3 cut(s) 60, 157, 1819
Hpy188I TCNGA 9 cut(s) 142, 283, 586, 637, 682, 799, 850, 895, 973
Hpy188III TCNNGA 7 cut(s) 7, 313, 348, 626, 1601, 1652, 1665
Hpy8I GTNNAC 3 cut(s) 60, 157, 1819
Hpy99I CGWCG 1 cut(s) 155
HpyAV CCTTC 8 cut(s) 164, 295, 401, 797, 1034, 1090, 1137, 1550
HpyCH4III ACNGT 5 cut(s) 370, 434, 470, 500, 713
HpyCH4IV ACGT 7 cut(s) 153, 524, 1180, 1216, 1415, 1632, 1762
HpyF10VI GCNNNNNNNGC 3 cut(s) 393, 1444, 1784
HpyF3I CTNAG 9 cut(s) 123, 280, 421, 949, 1030, 1131, 1233, 1725, 1822
HpySE526I ACGT 7 cut(s) 153, 524, 1180, 1216, 1415, 1632, 1762
Ksp22I TGATCA 1 cut(s) 3
KspAI GTTAAC 1 cut(s) 60
Kzo9I GATC 5 cut(s) 3, 237, 628, 1067, 1399
LmnI GCTCC 3 cut(s) 9, 628, 841
Lsp1109I GCAGC 4 cut(s) 131, 1121, 1434, 1499
LweI GCATC 8 cut(s) 913, 925, 1053, 1300, 1561, 1603, 1765, 1845
MaeI CTAG 2 cut(s) 651, 864
MaeII ACGT 7 cut(s) 153, 524, 1180, 1216, 1415, 1632, 1762
MaeIII GTNAC 1 cut(s) 470
MalI GATC 5 cut(s) 5, 239, 630, 1069, 1401
MboI GATC 5 cut(s) 3, 237, 628, 1067, 1399
MfeI CAATTG 2 cut(s) 1060, 1258
MflI RGATCY 2 cut(s) 1067, 1399
MhlI GDGCHC 6 cut(s) 14, 279, 389, 625, 838, 1153
MlyI GAGTC 2 cut(s) 1478, 1814
MmeI TCCRAC 3 cut(s) 59, 1073, 1398
Mph1103I ATGCAT 1 cut(s) 1315
MseI TTAA 4 cut(s) 59, 540, 1007, 1535
MslI CAYNNNNRTG 3 cut(s) 282, 540, 753
MspR9I CCNGG 1 cut(s) 1120
MunI CAATTG 2 cut(s) 1060, 1258
MvaI CCWGG 1 cut(s) 1120
MwoI GCNNNNNNNGC 3 cut(s) 393, 1444, 1784
NcoI CCATGG 1 cut(s) 1224
NdeII GATC 5 cut(s) 3, 237, 628, 1067, 1399
NlaIV GGNNCC 6 cut(s) 11, 624, 837, 1190, 1358, 1492
NsiI ATGCAT 1 cut(s) 1315
NspI RCATGY 3 cut(s) 539, 752, 1447
PaeI GCATGC 1 cut(s) 1447
PagI TCATGA 1 cut(s) 312
PceI AGGCCT 1 cut(s) 1126
PciI ACATGT 2 cut(s) 535, 748
PfeI GAWTC 5 cut(s) 309, 1229, 1323, 1501, 1690
PflFI GACNNNGTC 1 cut(s) 1726
PkrI GCNGC 5 cut(s) 121, 1111, 1222, 1449, 1514
PleI GAGTC 2 cut(s) 1477, 1814
PpsI GAGTC 2 cut(s) 1477, 1814
PscI ACATGT 2 cut(s) 535, 748
PshAI GACNNNNGTC 1 cut(s) 1354
Psp124BI GAGCTC 1 cut(s) 1153
Psp1406I AACGTT 1 cut(s) 1762
Psp6I CCWGG 1 cut(s) 1118
PspGI CCWGG 1 cut(s) 1118
PspN4I GGNNCC 6 cut(s) 11, 624, 837, 1190, 1358, 1492
PspPI GGNCC 4 cut(s) 519, 732, 1188, 1356
PstI CTGCAG 2 cut(s) 1407, 1816
PsuI RGATCY 2 cut(s) 1067, 1399
PsyI GACNNNGTC 1 cut(s) 1726
RsaI GTAC 6 cut(s) 231, 441, 954, 1056, 1370, 1854
RsaNI GTAC 6 cut(s) 230, 440, 953, 1055, 1369, 1853
RseI CAYNNNNRTG 3 cut(s) 282, 540, 753
SacI GAGCTC 1 cut(s) 1153
SaqAI TTAA 4 cut(s) 59, 540, 1007, 1535
SatI GCNGC 5 cut(s) 120, 1110, 1221, 1448, 1513
Sau3AI GATC 5 cut(s) 3, 237, 628, 1067, 1399
Sau96I GGNCC 4 cut(s) 519, 732, 1188, 1356
SchI GAGTC 2 cut(s) 1478, 1814
ScrFI CCNGG 1 cut(s) 1120
SduI GDGCHC 6 cut(s) 14, 279, 389, 625, 838, 1153
SfaNI GCATC 8 cut(s) 913, 925, 1053, 1300, 1561, 1603, 1765, 1845
SfcI CTRYAG 2 cut(s) 1403, 1812
SinI GGWCC 2 cut(s) 1188, 1356
SmiMI CAYNNNNRTG 3 cut(s) 282, 540, 753
SmlI CTYRAG 1 cut(s) 1652
SmoI CTYRAG 1 cut(s) 1652
SphI GCATGC 1 cut(s) 1447
SseBI AGGCCT 1 cut(s) 1126
SsiI CCGC 5 cut(s) 361, 964, 1221, 1506, 1847
SspI AATATT 1 cut(s) 616
SspMI CTAG 2 cut(s) 651, 864
SstI GAGCTC 1 cut(s) 1153
StuI AGGCCT 1 cut(s) 1126
StyD4I CCNGG 1 cut(s) 1118
StyI CCWWGG 1 cut(s) 1224
TaaI ACNGT 5 cut(s) 370, 434, 470, 500, 713
TaiI ACGT 7 cut(s) 156, 527, 1183, 1219, 1418, 1635, 1765
TaqI TCGA 4 cut(s) 1047, 1147, 1757, 1800
TatI WGTACW 4 cut(s) 439, 952, 1368, 1852
TauI GCSGC 1 cut(s) 1223
TfiI GAWTC 5 cut(s) 309, 1229, 1323, 1501, 1690
Tru1I TTAA 4 cut(s) 59, 540, 1007, 1535
Tru9I TTAA 4 cut(s) 59, 540, 1007, 1535
TseI GCWGC 4 cut(s) 119, 1109, 1447, 1512
TspGWI ACGGA 1 cut(s) 64
Tth111I GACNNNGTC 1 cut(s) 1726
VpaK11BI GGWCC 2 cut(s) 1188, 1356
XapI RAATTY 4 cut(s) 89, 640, 1296, 1749
XceI RCATGY 3 cut(s) 539, 752, 1447
XspI CTAG 2 cut(s) 651, 864
Zsp2I ATGCAT 1 cut(s) 1315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.