SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G41020 |
| fragaria_vesca | FvH4_3g31460 FvH4_3g31460 FvH4_3g31460 |
| malus_domestica | MD04G1037700.v1.1 |
| prunus_persica | Prupe.6G106700_v2.0.a1 Prupe.6G106700_v2.0.a1 Prupe.6G106700_v2.0.a1 Prupe.6G210800_v2.0.a1 |
| pyrus_communis | pycom04g03080 |
| rosa_chinensis | RchiOBHm_Chr5g0058161 RchiOBHm_Chr7g0222751 RchiOBHm_Chr7g0222761 RchiOBHm_Chr7g0227601 |
| rosa_laevigata | RLG00000002025 RLG00000022792 RLG00000035196 |
| rosa_multiflora | Rmu_sc0000367.1_g000018 Rmu_sc0001772.1_g000006 Rmu_sc0002881.1_g000007 Rmu_sc0004507.1_g000034 |
| rosa_roxburghii | Rroxscaffold_1G00022430 Rroxscaffold_6G00392510 |
| rosa_rugosa | Rorug05G0311800 Rorug05G0311900 Rorug05G0312000 Rorug05G0312100 Rorug07G0214100 |
| rosa_samantha | Rh3DG213100 Rh5AG380100 Rh5BG391100 Rh5CG415000 Rh5DG405800 Rh7AG356500 Rh7BG347500 Rh7BG349300 Rh7CG374000 Rh7DG351000 Rh7DG391500 |
| rosa_wichuraiana | Rw3G017260 Rw5G035770 Rw7G030250 Rw7G032910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2131 |
| Acc65I | GGTACC | 1 cut(s) | 718 |
| AccB1I | GGYRCC | 1 cut(s) | 718 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1235 |
| AccII | CGCG | 1 cut(s) | 31 |
| AclI | AACGTT | 2 cut(s) | 1796, 2074 |
| AclWI | GGATC | 3 cut(s) | 54, 197, 1719 |
| AcoI | YGGCCR | 1 cut(s) | 114 |
| AcsI | RAATTY | 3 cut(s) | 334, 591, 1608 |
| AcuI | CTGAAG | 1 cut(s) | 1410 |
| AfaI | GTAC | 2 cut(s) | 720, 1682 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1235, 1363, 1449 |
| AflIII | ACRYGT | 1 cut(s) | 979 |
| AjnI | CCWGG | 3 cut(s) | 62, 1103, 1975 |
| AluBI | AGCT | 7 cut(s) | 511, 1148, 1568, 1594, 1827, 1873, 1920 |
| AluI | AGCT | 7 cut(s) | 511, 1148, 1568, 1594, 1827, 1873, 1920 |
| Alw21I | GWGCWC | 2 cut(s) | 513, 1150 |
| Alw26I | GTCTC | 3 cut(s) | 116, 179, 1775 |
| AlwI | GGATC | 3 cut(s) | 54, 197, 1719 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1013 |
| ApeKI | GCWGC | 5 cut(s) | 912, 1439, 1759, 1824, 1900 |
| ApoI | RAATTY | 3 cut(s) | 334, 591, 1608 |
| AseI | ATTAAT | 3 cut(s) | 498, 1124, 2090 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 337 |
| Asp718I | GGTACC | 1 cut(s) | 718 |
| AspLEI | GCGC | 1 cut(s) | 1632 |
| AspS9I | GGNCC | 5 cut(s) | 36, 1238, 1455, 1518, 1668 |
| AsuC2I | CCSGG | 1 cut(s) | 1523 |
| AsuHPI | GGTGA | 4 cut(s) | 722, 1218, 1845, 2018 |
| AvaII | GGWCC | 2 cut(s) | 1518, 1668 |
| BaeGI | GKGCMC | 2 cut(s) | 803, 1805 |
| BanI | GGYRCC | 1 cut(s) | 718 |
| BanII | GRGCYC | 4 cut(s) | 513, 1150, 1483, 2037 |
| BbsI | GAAGAC | 5 cut(s) | 11, 587, 1095, 1213, 1299 |
| Bbv12I | GWGCWC | 2 cut(s) | 513, 1150 |
| BbvI | GCAGC | 5 cut(s) | 924, 1451, 1746, 1836, 1887 |
| BccI | CCATC | 8 cut(s) | 515, 596, 731, 767, 845, 1229, 1346, 1992 |
| BciT130I | CCWGG | 3 cut(s) | 64, 1105, 1977 |
| BcnI | CCSGG | 1 cut(s) | 1523 |
| BcoDI | GTCTC | 3 cut(s) | 116, 179, 1775 |
| BfaI | CTAG | 2 cut(s) | 1806, 2115 |
| BfmI | CTRYAG | 2 cut(s) | 564, 2124 |
| BfuAI | ACCTGC | 1 cut(s) | 2131 |
| Bme1390I | CCNGG | 4 cut(s) | 64, 1105, 1523, 1977 |
| Bme18I | GGWCC | 2 cut(s) | 1518, 1668 |
| BmgT120I | GGNCC | 5 cut(s) | 36, 1238, 1455, 1518, 1668 |
| BmiI | GGNNCC | 4 cut(s) | 149, 720, 1520, 1670 |
| BmrFI | CCNGG | 4 cut(s) | 64, 1105, 1523, 1977 |
| BmrI | ACTGGG | 1 cut(s) | 813 |
| BmsI | GCATC | 7 cut(s) | 90, 831, 1193, 1612, 1897, 1915, 2011 |
| BmuI | ACTGGG | 1 cut(s) | 813 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1666 |
| BpiI | GAAGAC | 5 cut(s) | 11, 587, 1095, 1213, 1299 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1208, 1240 |
| BpmI | CTGGAG | 3 cut(s) | 166, 771, 1998 |
| BpuEI | CTTGAG | 3 cut(s) | 617, 1985, 2021 |
| BpuMI | CCSGG | 1 cut(s) | 1523 |
| BsaBI | GATNNNNATC | 1 cut(s) | 201 |
| BsaI | GGTCTC | 1 cut(s) | 179 |
| BsaJI | CCNNGG | 9 cut(s) | 54, 107, 117, 151, 879, 1448, 1503, 1521, 2029 |
| BsaWI | WCCGGW | 1 cut(s) | 721 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 65, 95 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1235, 1363, 1449 |
| Bse1I | ACTGG | 3 cut(s) | 149, 409, 808 |
| Bse3DI | GCAATG | 1 cut(s) | 1090 |
| Bse8I | GATNNNNATC | 1 cut(s) | 201 |
| BseBI | CCWGG | 3 cut(s) | 64, 1105, 1977 |
| BseDI | CCNNGG | 9 cut(s) | 54, 107, 117, 151, 879, 1448, 1503, 1521, 2029 |
| BseGI | GGATG | 7 cut(s) | 99, 325, 607, 730, 1627, 1930, 1960 |
| BseJI | GATNNNNATC | 1 cut(s) | 201 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1235, 1363, 1449 |
| BseMI | GCAATG | 1 cut(s) | 1090 |
| BseMII | CTCAG | 1 cut(s) | 615 |
| BseNI | ACTGG | 3 cut(s) | 149, 409, 808 |
| BseRI | GAGGAG | 5 cut(s) | 34, 86, 472, 1520, 1691 |
| BseSI | GKGCMC | 2 cut(s) | 803, 1805 |
| BseXI | GCAGC | 5 cut(s) | 924, 1451, 1746, 1836, 1887 |
| BseYI | CCCAGC | 1 cut(s) | 1776 |
| Bsh1236I | CGCG | 1 cut(s) | 31 |
| BshNI | GGYRCC | 1 cut(s) | 718 |
| BsiHKAI | GWGCWC | 2 cut(s) | 513, 1150 |
| BsiSI | CCGG | 2 cut(s) | 722, 1523 |
| BslFI | GGGAC | 5 cut(s) | 40, 149, 374, 1366, 1654 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1235, 1363, 1449 |
| BsmAI | GTCTC | 3 cut(s) | 116, 179, 1775 |
| BsmFI | GGGAC | 5 cut(s) | 40, 149, 374, 1366, 1654 |
| Bso31I | GGTCTC | 1 cut(s) | 179 |
| Bsp1286I | GDGCHC | 6 cut(s) | 513, 803, 1150, 1483, 1805, 2037 |
| Bsp143I | GATC | 5 cut(s) | 46, 202, 1558, 1711, 1957 |
| Bsp19I | CCATGG | 4 cut(s) | 54, 117, 1448, 2029 |
| BspCNI | CTCAG | 1 cut(s) | 616 |
| BspFNI | CGCG | 1 cut(s) | 31 |
| BspLI | GGNNCC | 4 cut(s) | 149, 720, 1520, 1670 |
| BspMAI | CTGCAG | 1 cut(s) | 2128 |
| BspMI | ACCTGC | 1 cut(s) | 2131 |
| BspPI | GGATC | 3 cut(s) | 54, 197, 1719 |
| BspT107I | GGYRCC | 1 cut(s) | 718 |
| BspTNI | GGTCTC | 1 cut(s) | 179 |
| BsrDI | GCAATG | 1 cut(s) | 1090 |
| BsrI | ACTGG | 3 cut(s) | 149, 409, 808 |
| BssECI | CCNNGG | 9 cut(s) | 54, 107, 117, 151, 879, 1448, 1503, 1521, 2029 |
| BssMI | GATC | 5 cut(s) | 46, 202, 1558, 1711, 1957 |
| BssT1I | CCWWGG | 6 cut(s) | 54, 117, 151, 879, 1448, 2029 |
| Bst2UI | CCWGG | 3 cut(s) | 64, 1105, 1977 |
| Bst4CI | ACNGT | 3 cut(s) | 547, 767, 1278 |
| Bst6I | CTCTTC | 4 cut(s) | 153, 686, 1521, 1530 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1756 |
| BstC8I | GCNNGC | 3 cut(s) | 36, 1757, 1930 |
| BstDEI | CTNAG | 1 cut(s) | 624 |
| BstDSI | CCRYGG | 4 cut(s) | 54, 117, 1448, 2029 |
| BstEII | GGTNACC | 1 cut(s) | 2024 |
| BstF5I | GGATG | 7 cut(s) | 99, 325, 607, 730, 1627, 1930, 1960 |
| BstFNI | CGCG | 1 cut(s) | 31 |
| BstHHI | GCGC | 1 cut(s) | 1632 |
| BstKTI | GATC | 5 cut(s) | 49, 205, 1561, 1714, 1960 |
| BstMAI | GTCTC | 3 cut(s) | 116, 179, 1775 |
| BstMBI | GATC | 5 cut(s) | 46, 202, 1558, 1711, 1957 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 755, 807, 1756 |
| BstNI | CCWGG | 3 cut(s) | 64, 1105, 1977 |
| BstNSI | RCATGY | 3 cut(s) | 983, 1340, 1759 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1666 |
| BstPI | GGTNACC | 1 cut(s) | 2024 |
| BstSCI | CCNGG | 4 cut(s) | 62, 1103, 1521, 1975 |
| BstSFI | CTRYAG | 2 cut(s) | 564, 2124 |
| BstSLI | GKGCMC | 2 cut(s) | 803, 1805 |
| BstUI | CGCG | 1 cut(s) | 31 |
| BstV1I | GCAGC | 5 cut(s) | 924, 1451, 1746, 1836, 1887 |
| BstV2I | GAAGAC | 5 cut(s) | 11, 587, 1095, 1213, 1299 |
| BstX2I | RGATCY | 2 cut(s) | 46, 1711 |
| BstYI | RGATCY | 2 cut(s) | 46, 1711 |
| BtgI | CCRYGG | 4 cut(s) | 54, 117, 1448, 2029 |
| BtgZI | GCGATG | 1 cut(s) | 2011 |
| BtsCI | GGATG | 7 cut(s) | 99, 325, 607, 730, 1627, 1930, 1960 |
| BtsI | GCAGTG | 1 cut(s) | 817 |
| BtsIMutI | CAGTG | 3 cut(s) | 801, 817, 1795 |
| BveI | ACCTGC | 1 cut(s) | 2131 |
| Cac8I | GCNNGC | 3 cut(s) | 36, 1757, 1930 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1013 |
| CfoI | GCGC | 1 cut(s) | 1632 |
| Cfr13I | GGNCC | 5 cut(s) | 36, 1238, 1455, 1518, 1668 |
| CseI | GACGC | 2 cut(s) | 37, 1671 |
| Csp6I | GTAC | 2 cut(s) | 719, 1681 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 388, 423, 1856, 1891 |
| CviQI | GTAC | 2 cut(s) | 719, 1681 |
| DdeI | CTNAG | 1 cut(s) | 624 |
| DpnI | GATC | 5 cut(s) | 48, 204, 1560, 1713, 1959 |
| DpnII | GATC | 5 cut(s) | 46, 202, 1558, 1711, 1957 |
| EaeI | YGGCCR | 1 cut(s) | 114 |
| Eam1104I | CTCTTC | 4 cut(s) | 153, 686, 1521, 1530 |
| EarI | CTCTTC | 4 cut(s) | 153, 686, 1521, 1530 |
| EciI | GGCGGA | 1 cut(s) | 29 |
| Ecl136II | GAGCTC | 2 cut(s) | 511, 1148 |
| Eco130I | CCWWGG | 6 cut(s) | 54, 117, 151, 879, 1448, 2029 |
| Eco147I | AGGCCT | 1 cut(s) | 1975 |
| Eco24I | GRGCYC | 4 cut(s) | 513, 1150, 1483, 2037 |
| Eco31I | GGTCTC | 1 cut(s) | 179 |
| Eco47I | GGWCC | 2 cut(s) | 1518, 1668 |
| Eco53kI | GAGCTC | 2 cut(s) | 511, 1148 |
| Eco57I | CTGAAG | 1 cut(s) | 1410 |
| Eco91I | GGTNACC | 1 cut(s) | 2024 |
| EcoICRI | GAGCTC | 2 cut(s) | 511, 1148 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1455 |
| EcoO65I | GGTNACC | 1 cut(s) | 2024 |
| EcoRI | GAATTC | 1 cut(s) | 1608 |
| EcoRII | CCWGG | 3 cut(s) | 62, 1103, 1975 |
| EcoT14I | CCWWGG | 6 cut(s) | 54, 117, 151, 879, 1448, 2029 |
| EcoT22I | ATGCAT | 1 cut(s) | 1627 |
| EcoT38I | GRGCYC | 4 cut(s) | 513, 1150, 1483, 2037 |
| ErhI | CCWWGG | 6 cut(s) | 54, 117, 151, 879, 1448, 2029 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 322, 354 |
| FaqI | GGGAC | 5 cut(s) | 40, 149, 374, 1366, 1654 |
| FauI | CCCGC | 2 cut(s) | 27, 697 |
| FauNDI | CATATG | 1 cut(s) | 417 |
| FokI | GGATG | 7 cut(s) | 106, 332, 614, 737, 1634, 1937, 1967 |
| FriOI | GRGCYC | 4 cut(s) | 513, 1150, 1483, 2037 |
| FspBI | CTAG | 2 cut(s) | 1806, 2115 |
| GlaI | GCGC | 1 cut(s) | 1631 |
| GsaI | CCCAGC | 1 cut(s) | 1780 |
| GsuI | CTGGAG | 3 cut(s) | 166, 771, 1998 |
| HapII | CCGG | 2 cut(s) | 722, 1523 |
| HgaI | GACGC | 2 cut(s) | 37, 1671 |
| HhaI | GCGC | 1 cut(s) | 1632 |
| Hin6I | GCGC | 1 cut(s) | 1630 |
| HinP1I | GCGC | 1 cut(s) | 1630 |
| HincII | GTYRAC | 2 cut(s) | 559, 2131 |
| HindII | GTYRAC | 2 cut(s) | 559, 2131 |
| HindIII | AAGCTT | 1 cut(s) | 1592 |
| HinfI | GANTC | 3 cut(s) | 137, 263, 560 |
| HpaII | CCGG | 2 cut(s) | 722, 1523 |
| HphI | GGTGA | 4 cut(s) | 722, 1218, 1845, 2018 |
| Hpy166II | GTNNAC | 5 cut(s) | 559, 1274, 1705, 2120, 2131 |
| Hpy188I | TCNGA | 9 cut(s) | 51, 70, 827, 973, 1009, 1057, 1162, 1285, 1653 |
| Hpy188III | TCNNGA | 4 cut(s) | 267, 596, 1151, 2048 |
| Hpy8I | GTNNAC | 5 cut(s) | 559, 1274, 1705, 2120, 2131 |
| HpyAV | CCTTC | 9 cut(s) | 228, 232, 295, 310, 377, 868, 955, 1420, 1717 |
| HpyCH4III | ACNGT | 3 cut(s) | 547, 767, 1278 |
| HpyCH4IV | ACGT | 4 cut(s) | 818, 1063, 1796, 2074 |
| HpyCH4V | TGCA | 8 cut(s) | 192, 641, 822, 996, 1083, 1625, 1824, 2126 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 755, 807, 1756 |
| HpyF3I | CTNAG | 1 cut(s) | 624 |
| HpySE526I | ACGT | 4 cut(s) | 818, 1063, 1796, 2074 |
| HspAI | GCGC | 1 cut(s) | 1630 |
| KpnI | GGTACC | 1 cut(s) | 722 |
| Kzo9I | GATC | 5 cut(s) | 46, 202, 1558, 1711, 1957 |
| LmnI | GCTCC | 7 cut(s) | 147, 508, 807, 1145, 1153, 1507, 1565 |
| Lsp1109I | GCAGC | 5 cut(s) | 924, 1451, 1746, 1836, 1887 |
| LweI | GCATC | 7 cut(s) | 90, 831, 1193, 1612, 1897, 1915, 2011 |
| MaeI | CTAG | 2 cut(s) | 1806, 2115 |
| MaeII | ACGT | 4 cut(s) | 818, 1063, 1796, 2074 |
| MaeIII | GTNAC | 3 cut(s) | 727, 761, 2024 |
| MalI | GATC | 5 cut(s) | 48, 204, 1560, 1713, 1959 |
| MboI | GATC | 5 cut(s) | 46, 202, 1558, 1711, 1957 |
| MflI | RGATCY | 2 cut(s) | 46, 1711 |
| MhlI | GDGCHC | 6 cut(s) | 513, 803, 1150, 1483, 1805, 2037 |
| MlyI | GAGTC | 2 cut(s) | 131, 554 |
| MmeI | TCCRAC | 4 cut(s) | 48, 63, 1035, 1403 |
| Mph1103I | ATGCAT | 1 cut(s) | 1627 |
| MroXI | GAANNNNTTC | 1 cut(s) | 337 |
| MseI | TTAA | 9 cut(s) | 498, 897, 933, 1017, 1124, 1319, 1461, 1847, 2090 |
| MspI | CCGG | 2 cut(s) | 722, 1523 |
| MspR9I | CCNGG | 4 cut(s) | 64, 1105, 1523, 1977 |
| MvaI | CCWGG | 3 cut(s) | 64, 1105, 1977 |
| MvnI | CGCG | 1 cut(s) | 31 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 755, 807, 1756 |
| NciI | CCSGG | 1 cut(s) | 1523 |
| NcoI | CCATGG | 4 cut(s) | 54, 117, 1448, 2029 |
| NdeI | CATATG | 1 cut(s) | 417 |
| NdeII | GATC | 5 cut(s) | 46, 202, 1558, 1711, 1957 |
| NlaIV | GGNNCC | 4 cut(s) | 149, 720, 1520, 1670 |
| NmeAIII | GCCGAG | 2 cut(s) | 132, 1528 |
| NmuCI | GTSAC | 1 cut(s) | 2024 |
| NsiI | ATGCAT | 1 cut(s) | 1627 |
| NspI | RCATGY | 3 cut(s) | 983, 1340, 1759 |
| PaeI | GCATGC | 1 cut(s) | 1759 |
| PceI | AGGCCT | 1 cut(s) | 1975 |
| PciI | ACATGT | 1 cut(s) | 979 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 104 |
| PdmI | GAANNNNTTC | 1 cut(s) | 337 |
| PfeI | GAWTC | 1 cut(s) | 263 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1235 |
| PleI | GAGTC | 2 cut(s) | 131, 554 |
| PpsI | GAGTC | 2 cut(s) | 131, 554 |
| PscI | ACATGT | 1 cut(s) | 979 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1666 |
| PshBI | ATTAAT | 3 cut(s) | 498, 1124, 2090 |
| Psp124BI | GAGCTC | 2 cut(s) | 513, 1150 |
| Psp1406I | AACGTT | 2 cut(s) | 1796, 2074 |
| Psp6I | CCWGG | 3 cut(s) | 62, 1103, 1975 |
| PspEI | GGTNACC | 1 cut(s) | 2024 |
| PspFI | CCCAGC | 1 cut(s) | 1776 |
| PspGI | CCWGG | 3 cut(s) | 62, 1103, 1975 |
| PspN4I | GGNNCC | 4 cut(s) | 149, 720, 1520, 1670 |
| PspPI | GGNCC | 5 cut(s) | 36, 1238, 1455, 1518, 1668 |
| PstI | CTGCAG | 1 cut(s) | 2128 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1013 |
| PsuI | RGATCY | 2 cut(s) | 46, 1711 |
| RsaI | GTAC | 2 cut(s) | 720, 1682 |
| RsaNI | GTAC | 2 cut(s) | 719, 1681 |
| SacI | GAGCTC | 2 cut(s) | 513, 1150 |
| SaqAI | TTAA | 9 cut(s) | 498, 897, 933, 1017, 1124, 1319, 1461, 1847, 2090 |
| Sau3AI | GATC | 5 cut(s) | 46, 202, 1558, 1711, 1957 |
| Sau96I | GGNCC | 5 cut(s) | 36, 1238, 1455, 1518, 1668 |
| SchI | GAGTC | 2 cut(s) | 131, 554 |
| ScrFI | CCNGG | 4 cut(s) | 64, 1105, 1523, 1977 |
| SduI | GDGCHC | 6 cut(s) | 513, 803, 1150, 1483, 1805, 2037 |
| SfaNI | GCATC | 7 cut(s) | 90, 831, 1193, 1612, 1897, 1915, 2011 |
| SfcI | CTRYAG | 2 cut(s) | 564, 2124 |
| SinI | GGWCC | 2 cut(s) | 1518, 1668 |
| SmlI | CTYRAG | 3 cut(s) | 596, 1964, 2036 |
| SmoI | CTYRAG | 3 cut(s) | 596, 1964, 2036 |
| SphI | GCATGC | 1 cut(s) | 1759 |
| SseBI | AGGCCT | 1 cut(s) | 1975 |
| SspI | AATATT | 1 cut(s) | 1771 |
| SspMI | CTAG | 2 cut(s) | 1806, 2115 |
| SstI | GAGCTC | 2 cut(s) | 513, 1150 |
| StuI | AGGCCT | 1 cut(s) | 1975 |
| StyD4I | CCNGG | 4 cut(s) | 62, 1103, 1521, 1975 |
| StyI | CCWWGG | 6 cut(s) | 54, 117, 151, 879, 1448, 2029 |
| TaaI | ACNGT | 3 cut(s) | 547, 767, 1278 |
| TaiI | ACGT | 4 cut(s) | 821, 1066, 1799, 2077 |
| TaqI | TCGA | 2 cut(s) | 140, 1169 |
| TauI | GCSGC | 5 cut(s) | 34, 62, 80, 106, 116 |
| TfiI | GAWTC | 1 cut(s) | 263 |
| Tru1I | TTAA | 9 cut(s) | 498, 897, 933, 1017, 1124, 1319, 1461, 1847, 2090 |
| Tru9I | TTAA | 9 cut(s) | 498, 897, 933, 1017, 1124, 1319, 1461, 1847, 2090 |
| TscAI | CASTG | 3 cut(s) | 808, 817, 1795 |
| TseFI | GTSAC | 1 cut(s) | 2024 |
| TseI | GCWGC | 5 cut(s) | 912, 1439, 1759, 1824, 1900 |
| Tsp45I | GTSAC | 1 cut(s) | 2024 |
| TspDTI | ATGAA | 7 cut(s) | 17, 336, 434, 1101, 1548, 1601, 1736 |
| TspGWI | ACGGA | 2 cut(s) | 59, 523 |
| TspRI | CASTG | 3 cut(s) | 808, 817, 1795 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1235 |
| VpaK11BI | GGWCC | 2 cut(s) | 1518, 1668 |
| VspI | ATTAAT | 3 cut(s) | 498, 1124, 2090 |
| XapI | RAATTY | 3 cut(s) | 334, 591, 1608 |
| XceI | RCATGY | 3 cut(s) | 983, 1340, 1759 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1139 |
| XmnI | GAANNNNTTC | 1 cut(s) | 337 |
| XspI | CTAG | 2 cut(s) | 1806, 2115 |
| Zsp2I | ATGCAT | 1 cut(s) | 1627 |