Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001369

Physical Location & Seq

Genomic Coordinates Forward (+)

30349522 .. 30355332

Gene Structure 5811 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G358700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGAAGATTGTTCGCAAGGACCTTGTTCCAGGCGGACCCGGAAGCGTTAAGATGATACCGGTCGATTCCGATGATCTATGGTATGCTTATAATTTGATTGCTCCAGGAGACATAGTTATGGCTGTCACTGTTAGGAAAGTTCTGAGAGAAAGTGCTTCTGGTGGAAGAGATGCAGAGCGTGTGAAACTGAAGTTAGAGATAAAAGTTGAGGAGGTTGCTGATTATGACAAAGTAGGAGCTGTCTTGCGTATACGTGGAAAGAATATCCTGGAGAATGAATATGTAAAGATAGGAGCATTTCACACTTTGGAACTTGAGCTGCAGCGACCTTTTGTGTTAAGAAAGGATGTCTGGGACTCATTGGCCTTGCACGAACTCAATCAAGCCTCTGATCCTGCTGCAAGTGCTGATCTAGCTGTGATCTTAATGCAAGAAGGATTAGCACATGTTCTCCTTGTTGGTAAAAGCATGACAATCACTCGTTCACGGATAGAAACTTCAATTCCTCGCAAGCATGGACCTGCCATTGCAGGTTATGAGTCGGCTTTGAGTAAGTTCTTTGAGAATGTATTACAGGCTTTCTTGAAGTATGTTGATTTCAGTGTTGTCCGCTGTGCTGTGATTGCAAGTCCAGGTTTCACAAAGGATCAGTTTCATCGTCACCTATTGTTGGAGGCAGAAAGAAGACAGCTGAGATCTATTATTGAAAACAAGTCGCGGATAATTCTTGTGCATACAAGCTCGGGTTACAAGCATAGTTTGAGGGAGGTTCTGGATGCTCCAAATGTTATGAATATGATTAAAGATACTCAAGCAGCACAAGAGGTCCGAGTTCTCCAAGATTTCTTCGGCATGCTTTCAAATGATCCAGATCGTGCATGCTATGGACCAAAGCATGTTGAAGTTGCTCATGAACGAATGGCTATCCAAACCCTTTTGATAACAGATGAACTCTTCAGGAATGCGGATGTAGTAGCAAGGCAAAAGTATGCCAATTTGGTGAAATCAGTGAAGGATTCAGGGGGCACTGTTCATATTTTTTCTTCTTTGCATGTTTCAGGAGAACAACTGGCACAAATAACTGGGATCGCTGCAATCCTTCGTTTCCCTCTACCAGACCTAGACGACATAGAGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000956 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0016075 GO:0019222 GO:0019439 GO:0019538 GO:0022411 GO:0032790 GO:0032984 GO:0032988 GO:0034641 GO:0034645 GO:0034655 GO:0034660 GO:0034661 GO:0043021 GO:0043022 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0043933 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044464 GO:0044877 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0070651 GO:0070966 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:1901360 GO:1901361 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903008

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

eRF1_1 eRF1_2 eRF1_3

Protein Analysis

380

Amino Acids

42.3

Weight (kDa)

6.88

Isoelectric Point (pI)

37.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001369)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58390 AT4G27650 AT4G27650 AT4G27650
fragaria_vesca	FvH4_4g33100 FvH4_6g00790 FvH4_6g00790 FvH4_6g00790 FvH4_6g00790 FvH4_6g00790 FvH4_6g17270
malus_domestica	MD04G1241200.v1.1 MD12G1258200.v1.1
prunus_persica	Prupe.6G358700_v2.0.a1 Prupe.6G358700_v2.0.a1 Prupe.7G122700_v2.0.a1
pyrus_communis	pycom04g21290 pycom12g23680 pycom14g09460
rosa_chinensis	RchiOBHm_Chr3g0448271 RchiOBHm_Chr3g0471381 RchiOBHm_Chr4g0442151
rosa_laevigata	RLG00000006036 RLG00000024182 RLG00000025931
rosa_multiflora	Rmu_sc0006582.1_g000016 Rmu_sc0010284.1_g000010
rosa_roxburghii	Rroxscaffold_5G00383060 Rroxscaffold_6G00410020 Rroxscaffold_6G00426420
rosa_rugosa	Rorug02G0610000 Rorug02G0610000 Rorug02G0610000 Rorug02G0610000 Rorug03G0117400 Rorug04G0339300
rosa_samantha	Rh3AG009500 Rh3AG167200 Rh3AG167300 Rh3BG009100 Rh3BG192700 Rh3CG009100 Rh3CG183000 Rh3CG183100 Rh3DG009700 Rh3DG182800 Rh3DG182900 Rh4BG404400 Rh4CG419400 Rh4DG397500
rosa_wichuraiana	Rw3G000770 Rw3G015750 Rw4G033770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	90
Acc36I	ACCTGC	2 cut(s)	521, 529
AccI	GTMKAC	1 cut(s)	250
AccII	CGCG	1 cut(s)	718
AciI	CCGC	4 cut(s)	33, 610, 718, 965
AclWI	GGATC	4 cut(s)	386, 654, 860, 1094
AcuI	CTGAAG	2 cut(s)	209, 940
AfiI	CCNNNNNNNGG	1 cut(s)	670
AflIII	ACRYGT	1 cut(s)	445
AgeI	ACCGGT	1 cut(s)	58
AgsI	TTSAA	5 cut(s)	501, 586, 707, 861, 902
AjnI	CCWGG	4 cut(s)	28, 103, 267, 631
AluBI	AGCT	5 cut(s)	239, 319, 416, 691, 741
AluI	AGCT	5 cut(s)	239, 319, 416, 691, 741
Alw26I	GTCTC	1 cut(s)	102
AlwI	GGATC	4 cut(s)	386, 654, 860, 1094
Ama87I	CYCGRG	1 cut(s)	742
AoxI	GGCC	1 cut(s)	363
ApeKI	GCWGC	5 cut(s)	319, 322, 398, 815, 1091
AsiGI	ACCGGT	1 cut(s)	58
AspS9I	GGNCC	5 cut(s)	19, 35, 518, 826, 887
AsuC2I	CCSGG	1 cut(s)	39
AsuHPI	GGTGA	2 cut(s)	653, 1012
AvaI	CYCGRG	1 cut(s)	742
AvaII	GGWCC	5 cut(s)	19, 35, 518, 826, 887
BaeGI	GKGCMC	1 cut(s)	1028
BbsI	GAAGAC	1 cut(s)	691
BbvI	GCAGC	5 cut(s)	306, 334, 385, 827, 1078
BciT130I	CCWGG	4 cut(s)	30, 105, 269, 633
BcnI	CCSGG	1 cut(s)	39
BcoDI	GTCTC	1 cut(s)	102
BfaI	CTAG	2 cut(s)	413, 1121
BfmI	CTRYAG	1 cut(s)	320
BfuAI	ACCTGC	2 cut(s)	521, 529
BglII	AGATCT	1 cut(s)	695
BisI	GCNGC	5 cut(s)	320, 323, 399, 816, 1092
BlsI	GCNGC	5 cut(s)	321, 324, 400, 817, 1093
Bme1390I	CCNGG	5 cut(s)	30, 39, 105, 269, 633
Bme18I	GGWCC	5 cut(s)	19, 35, 518, 826, 887
BmeT110I	CYCGRG	1 cut(s)	742
BmgT120I	GGNCC	5 cut(s)	19, 35, 518, 826, 887
BmiI	GGNNCC	1 cut(s)	37
BmrFI	CCNGG	5 cut(s)	30, 39, 105, 269, 633
BmrI	ACTGGG	1 cut(s)	1092
BmsI	GCATC	2 cut(s)	160, 766
BmuI	ACTGGG	1 cut(s)	1092
BpiI	GAAGAC	1 cut(s)	691
BpmI	CTGGAG	2 cut(s)	87, 290
BpuEI	CTTGAG	2 cut(s)	335, 795
BpuMI	CCSGG	1 cut(s)	39
BsaAI	YACGTR	1 cut(s)	254
BsaBI	GATNNNNATC	1 cut(s)	870
BsaWI	WCCGGW	1 cut(s)	58
BsaXI	ACNNNNNCTCC	4 cut(s)	99, 129, 435, 465
Bsc4I	CCNNNNNNNGG	1 cut(s)	670
Bse118I	RCCGGY	1 cut(s)	58
Bse1I	ACTGG	2 cut(s)	1074, 1087
Bse3DI	GCAATG	1 cut(s)	525
Bse8I	GATNNNNATC	1 cut(s)	870
BseBI	CCWGG	4 cut(s)	30, 105, 269, 633
BseGI	GGATG	3 cut(s)	352, 781, 973
BseJI	GATNNNNATC	1 cut(s)	870
BseLI	CCNNNNNNNGG	1 cut(s)	670
BseMI	GCAATG	1 cut(s)	525
BseMII	CTCAG	2 cut(s)	134, 683
BseNI	ACTGG	2 cut(s)	1074, 1087
BseRI	GAGGAG	1 cut(s)	224
BseSI	GKGCMC	1 cut(s)	1028
BseXI	GCAGC	5 cut(s)	306, 334, 385, 827, 1078
Bsh1236I	CGCG	1 cut(s)	718
Bsh1285I	CGRYCG	1 cut(s)	63
BshFI	GGCC	1 cut(s)	365
BshTI	ACCGGT	1 cut(s)	58
BsiEI	CGRYCG	1 cut(s)	63
BsiHKCI	CYCGRG	1 cut(s)	742
BsiSI	CCGG	2 cut(s)	39, 59
BslFI	GGGAC	1 cut(s)	368
BslI	CCNNNNNNNGG	1 cut(s)	670
BsmAI	GTCTC	1 cut(s)	102
BsmFI	GGGAC	1 cut(s)	368
BsmI	GAATGC	1 cut(s)	967
BsnI	GGCC	1 cut(s)	365
BsoBI	CYCGRG	1 cut(s)	742
Bsp1286I	GDGCHC	1 cut(s)	1028
Bsp143I	GATC	9 cut(s)	73, 391, 409, 420, 646, 695, 865, 871, 1086
BspACI	CCGC	4 cut(s)	33, 610, 718, 965
BspANI	GGCC	1 cut(s)	365
BspCNI	CTCAG	2 cut(s)	135, 684
BspFNI	CGCG	1 cut(s)	718
BspHI	TCATGA	1 cut(s)	910
BspLI	GGNNCC	1 cut(s)	37
BspMAI	CTGCAG	1 cut(s)	324
BspMI	ACCTGC	2 cut(s)	521, 529
BspPI	GGATC	4 cut(s)	386, 654, 860, 1094
BsrDI	GCAATG	1 cut(s)	525
BsrFI	RCCGGY	1 cut(s)	58
BsrI	ACTGG	2 cut(s)	1074, 1087
BssAI	RCCGGY	1 cut(s)	58
BssMI	GATC	9 cut(s)	73, 391, 409, 420, 646, 695, 865, 871, 1086
BssNAI	GTATAC	1 cut(s)	251
Bst1107I	GTATAC	1 cut(s)	251
Bst2UI	CCWGG	4 cut(s)	30, 105, 269, 633
Bst4CI	ACNGT	2 cut(s)	130, 1030
Bst6I	CTCTTC	2 cut(s)	160, 959
BstBAI	YACGTR	1 cut(s)	254
BstC8I	GCNNGC	3 cut(s)	512, 854, 880
BstDEI	CTNAG	2 cut(s)	143, 692
BstF5I	GGATG	3 cut(s)	352, 781, 973
BstFNI	CGCG	1 cut(s)	718
BstKTI	GATC	9 cut(s)	76, 394, 412, 423, 649, 698, 868, 874, 1089
BstMAI	GTCTC	1 cut(s)	102
BstMBI	GATC	9 cut(s)	73, 391, 409, 420, 646, 695, 865, 871, 1086
BstMCI	CGRYCG	1 cut(s)	63
BstMWI	GCNNNNNNNGC	3 cut(s)	404, 413, 623
BstNI	CCWGG	4 cut(s)	30, 105, 269, 633
BstNSI	RCATGY	5 cut(s)	449, 856, 882, 899, 1055
BstSCI	CCNGG	5 cut(s)	28, 37, 103, 267, 631
BstSFI	CTRYAG	1 cut(s)	320
BstSLI	GKGCMC	1 cut(s)	1028
BstUI	CGCG	1 cut(s)	718
BstV1I	GCAGC	5 cut(s)	306, 334, 385, 827, 1078
BstV2I	GAAGAC	1 cut(s)	691
BstX2I	RGATCY	1 cut(s)	695
BstYI	RGATCY	1 cut(s)	695
BstZ17I	GTATAC	1 cut(s)	251
BsuRI	GGCC	1 cut(s)	365
BtsCI	GGATG	3 cut(s)	352, 781, 973
BtsIMutI	CAGTG	4 cut(s)	126, 607, 1014, 1026
BveI	ACCTGC	2 cut(s)	521, 529
Cac8I	GCNNGC	3 cut(s)	512, 854, 880
CciI	TCATGA	1 cut(s)	910
Cfr10I	RCCGGY	1 cut(s)	58
Cfr13I	GGNCC	5 cut(s)	19, 35, 518, 826, 887
CspAI	ACCGGT	1 cut(s)	58
CviAII	CATG	8 cut(s)	446, 469, 515, 853, 879, 896, 911, 1052
DdeI	CTNAG	2 cut(s)	143, 692
DpnI	GATC	9 cut(s)	75, 393, 411, 422, 648, 697, 867, 873, 1088
DpnII	GATC	9 cut(s)	73, 391, 409, 420, 646, 695, 865, 871, 1086
Eam1104I	CTCTTC	2 cut(s)	160, 959
EarI	CTCTTC	2 cut(s)	160, 959
EciI	GGCGGA	1 cut(s)	48
Eco47I	GGWCC	5 cut(s)	19, 35, 518, 826, 887
Eco57I	CTGAAG	2 cut(s)	209, 940
Eco88I	CYCGRG	1 cut(s)	742
EcoO109I	RGGNCCY	1 cut(s)	19
EcoRII	CCWGG	4 cut(s)	28, 103, 267, 631
FaeI	CATG	8 cut(s)	449, 472, 518, 856, 882, 899, 914, 1055
FaqI	GGGAC	1 cut(s)	368
FatI	CATG	8 cut(s)	445, 468, 514, 852, 878, 895, 910, 1051
FblI	GTMKAC	1 cut(s)	250
Fnu4HI	GCNGC	5 cut(s)	320, 323, 399, 816, 1092
FokI	GGATG	3 cut(s)	359, 788, 980
Fsp4HI	GCNGC	5 cut(s)	320, 323, 399, 816, 1092
FspBI	CTAG	2 cut(s)	413, 1121
GluI	GCNGC	5 cut(s)	320, 323, 399, 816, 1092
GsuI	CTGGAG	2 cut(s)	87, 290
HaeIII	GGCC	1 cut(s)	365
HapII	CCGG	2 cut(s)	39, 59
Hin1II	CATG	8 cut(s)	449, 472, 518, 856, 882, 899, 914, 1055
HinfI	GANTC	4 cut(s)	65, 356, 539, 1016
HpaII	CCGG	2 cut(s)	39, 59
HphI	GGTGA	2 cut(s)	653, 1012
Hpy166II	GTNNAC	2 cut(s)	251, 485
Hpy188I	TCNGA	4 cut(s)	70, 144, 391, 830
Hpy188III	TCNNGA	6 cut(s)	583, 773, 869, 911, 958, 1059
Hpy8I	GTNNAC	2 cut(s)	251, 485
HpyAV	CCTTC	3 cut(s)	428, 1006, 1109
HpyCH4III	ACNGT	2 cut(s)	130, 1030
HpyCH4IV	ACGT	1 cut(s)	253
HpyF10VI	GCNNNNNNNGC	3 cut(s)	404, 413, 623
HpyF3I	CTNAG	2 cut(s)	143, 692
HpySE526I	ACGT	1 cut(s)	253
Hsp92II	CATG	8 cut(s)	449, 472, 518, 856, 882, 899, 914, 1055
Kzo9I	GATC	9 cut(s)	73, 391, 409, 420, 646, 695, 865, 871, 1086
LmnI	GCTCC	4 cut(s)	106, 236, 293, 784
Lsp1109I	GCAGC	5 cut(s)	306, 334, 385, 827, 1078
LweI	GCATC	2 cut(s)	160, 766
MaeI	CTAG	2 cut(s)	413, 1121
MaeII	ACGT	1 cut(s)	253
MaeIII	GTNAC	3 cut(s)	124, 659, 746
MalI	GATC	9 cut(s)	75, 393, 411, 422, 648, 697, 867, 873, 1088
MboI	GATC	9 cut(s)	73, 391, 409, 420, 646, 695, 865, 871, 1086
MboII	GAAGA	6 cut(s)	16, 177, 696, 838, 946, 1035
MflI	RGATCY	1 cut(s)	695
MhlI	GDGCHC	1 cut(s)	1028
MluCI	AATT	4 cut(s)	91, 501, 723, 994
MlyI	GAGTC	2 cut(s)	350, 548
MmeI	TCCRAC	1 cut(s)	651
MnlI	CCTC	9 cut(s)	202, 205, 397, 516, 667, 756, 760, 817, 1119
MseI	TTAA	4 cut(s)	48, 338, 425, 801
MslI	CAYNNNNRTG	2 cut(s)	116, 1133
MspA1I	CMGCKG	2 cut(s)	612, 691
MspI	CCGG	2 cut(s)	39, 59
MspR9I	CCNGG	5 cut(s)	30, 39, 105, 269, 633
Mva1269I	GAATGC	1 cut(s)	967
MvaI	CCWGG	4 cut(s)	30, 105, 269, 633
MvnI	CGCG	1 cut(s)	718
MwoI	GCNNNNNNNGC	3 cut(s)	404, 413, 623
NciI	CCSGG	1 cut(s)	39
NdeII	GATC	9 cut(s)	73, 391, 409, 420, 646, 695, 865, 871, 1086
NlaIII	CATG	8 cut(s)	449, 472, 518, 856, 882, 899, 914, 1055
NlaIV	GGNNCC	1 cut(s)	37
NmuCI	GTSAC	2 cut(s)	124, 659
NspI	RCATGY	5 cut(s)	449, 856, 882, 899, 1055
PaeI	GCATGC	2 cut(s)	856, 882
PagI	TCATGA	1 cut(s)	910
PciI	ACATGT	1 cut(s)	445
PctI	GAATGC	1 cut(s)	967
PfeI	GAWTC	2 cut(s)	65, 1016
PfoI	TCCNGGA	2 cut(s)	103, 267
PinAI	ACCGGT	1 cut(s)	58
PkrI	GCNGC	5 cut(s)	321, 324, 400, 817, 1093
PleI	GAGTC	2 cut(s)	350, 547
PpsI	GAGTC	2 cut(s)	350, 547
Ppu21I	YACGTR	1 cut(s)	254
PpuMI	RGGWCCY	1 cut(s)	19
PscI	ACATGT	1 cut(s)	445
PsiI	TTATAA	1 cut(s)	90
Psp5II	RGGWCCY	1 cut(s)	19
Psp6I	CCWGG	4 cut(s)	28, 103, 267, 631
PspGI	CCWGG	4 cut(s)	28, 103, 267, 631
PspN4I	GGNNCC	1 cut(s)	37
PspPI	GGNCC	5 cut(s)	19, 35, 518, 826, 887
PspPPI	RGGWCCY	1 cut(s)	19
PstI	CTGCAG	1 cut(s)	324
PsuI	RGATCY	1 cut(s)	695
PvuII	CAGCTG	1 cut(s)	691
RseI	CAYNNNNRTG	2 cut(s)	116, 1133
SaqAI	TTAA	4 cut(s)	48, 338, 425, 801
SatI	GCNGC	5 cut(s)	320, 323, 399, 816, 1092
Sau3AI	GATC	9 cut(s)	73, 391, 409, 420, 646, 695, 865, 871, 1086
Sau96I	GGNCC	5 cut(s)	19, 35, 518, 826, 887
SchI	GAGTC	2 cut(s)	350, 548
ScrFI	CCNGG	5 cut(s)	30, 39, 105, 269, 633
SduI	GDGCHC	1 cut(s)	1028
SfaNI	GCATC	2 cut(s)	160, 766
SfcI	CTRYAG	1 cut(s)	320
SinI	GGWCC	5 cut(s)	19, 35, 518, 826, 887
SmiMI	CAYNNNNRTG	2 cut(s)	116, 1133
SmlI	CTYRAG	2 cut(s)	314, 810
SmoI	CTYRAG	2 cut(s)	314, 810
SphI	GCATGC	2 cut(s)	856, 882
Sse9I	AATT	4 cut(s)	91, 501, 723, 994
SsiI	CCGC	4 cut(s)	33, 610, 718, 965
SspMI	CTAG	2 cut(s)	413, 1121
StyD4I	CCNGG	5 cut(s)	28, 37, 103, 267, 631
TaaI	ACNGT	2 cut(s)	130, 1030
TaiI	ACGT	1 cut(s)	256
TaqI	TCGA	1 cut(s)	63
TasI	AATT	4 cut(s)	91, 501, 723, 994
TfiI	GAWTC	2 cut(s)	65, 1016
Tru1I	TTAA	4 cut(s)	48, 338, 425, 801
Tru9I	TTAA	4 cut(s)	48, 338, 425, 801
TscAI	CASTG	4 cut(s)	133, 607, 1014, 1033
TseFI	GTSAC	2 cut(s)	124, 659
TseI	GCWGC	5 cut(s)	319, 322, 398, 815, 1091
Tsp45I	GTSAC	2 cut(s)	124, 659
TspDTI	ATGAA	7 cut(s)	17, 291, 644, 806, 927, 963, 1022
TspGWI	ACGGA	1 cut(s)	502
TspRI	CASTG	4 cut(s)	133, 607, 1014, 1033
VpaK11BI	GGWCC	5 cut(s)	19, 35, 518, 826, 887
XceI	RCATGY	5 cut(s)	449, 856, 882, 899, 1055
XmiI	GTMKAC	1 cut(s)	250
XspI	CTAG	2 cut(s)	413, 1121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.