NEMP family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G28760 |
| fragaria_vesca | FvH4_1g28540 FvH4_1g28540 FvH4_1g28540 |
| malus_domestica | MD09G1231100.v1.1 MD12G1009700.v1.1 MD12G1009900.v1.1 MD14G1007100.v1.1 |
| prunus_persica | Prupe.7G011900_v2.0.a1 |
| pyrus_communis | pycom09g15000 pycom12g00750 pycom14g00560 |
| rosa_chinensis | RchiOBHm_Chr3g0496221 RchiOBHm_Chr7g0220041 |
| rosa_laevigata | RLG00000022546 |
| rosa_multiflora | Rmu_sc0004080.1_g000008 Rmu_sc0012042.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00132890 Rroxscaffold_6G00389440 |
| rosa_rugosa | Rorug03G0280700 |
| rosa_samantha | Rh2BG396500 Rh3AG327700 Rh3BG363700 Rh3CG360700 Rh3DG363800 Rh4AG043100 Rh5AG246200 Rh5AG289100 Rh6AG095200 Rh6CG082300 Rh6DG078000 |
| rosa_wichuraiana | Rw3G028700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 596 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1080, 1163 |
| Acc16I | TGCGCA | 1 cut(s) | 902 |
| Acc36I | ACCTGC | 1 cut(s) | 1089 |
| AccB1I | GGYRCC | 2 cut(s) | 480, 523 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 260 |
| AccBSI | CCGCTC | 1 cut(s) | 1032 |
| AccI | GTMKAC | 2 cut(s) | 1057, 1363 |
| AccII | CGCG | 1 cut(s) | 803 |
| AciI | CCGC | 5 cut(s) | 18, 140, 803, 1032, 1294 |
| AclWI | GGATC | 4 cut(s) | 676, 694, 1349, 1452 |
| AcsI | RAATTY | 3 cut(s) | 721, 736, 1088 |
| AcuI | CTGAAG | 2 cut(s) | 344, 1347 |
| AcvI | CACGTG | 1 cut(s) | 1199 |
| AcyI | GRCGYC | 1 cut(s) | 481 |
| AfaI | GTAC | 5 cut(s) | 120, 186, 324, 821, 1214 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 260, 499, 1169 |
| AgsI | TTSAA | 7 cut(s) | 60, 110, 424, 461, 567, 726, 1221 |
| AhlI | ACTAGT | 1 cut(s) | 784 |
| AjnI | CCWGG | 4 cut(s) | 151, 203, 436, 609 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1369, 1401 |
| AluBI | AGCT | 3 cut(s) | 809, 991, 1301 |
| AluI | AGCT | 3 cut(s) | 809, 991, 1301 |
| Alw21I | GWGCWC | 2 cut(s) | 380, 935 |
| Alw26I | GTCTC | 4 cut(s) | 53, 255, 775, 850 |
| AlwI | GGATC | 4 cut(s) | 676, 694, 1349, 1452 |
| ApeKI | GCWGC | 1 cut(s) | 809 |
| ApoI | RAATTY | 3 cut(s) | 721, 736, 1088 |
| AspLEI | GCGC | 3 cut(s) | 89, 483, 903 |
| AsuC2I | CCSGG | 1 cut(s) | 767 |
| AsuHPI | GGTGA | 2 cut(s) | 439, 1173 |
| AsuII | TTCGAA | 1 cut(s) | 238 |
| BaeGI | GKGCMC | 2 cut(s) | 1198, 1442 |
| BanI | GGYRCC | 2 cut(s) | 480, 523 |
| BanII | GRGCYC | 1 cut(s) | 8 |
| BbrPI | CACGTG | 1 cut(s) | 1199 |
| BbsI | GAAGAC | 1 cut(s) | 640 |
| Bbv12I | GWGCWC | 2 cut(s) | 380, 935 |
| BbvI | GCAGC | 1 cut(s) | 796 |
| BccI | CCATC | 5 cut(s) | 262, 848, 929, 1141, 1192 |
| BceAI | ACGGC | 2 cut(s) | 100, 1025 |
| BciT130I | CCWGG | 4 cut(s) | 153, 205, 438, 611 |
| BclI | TGATCA | 1 cut(s) | 1201 |
| BcnI | CCSGG | 1 cut(s) | 767 |
| BcoDI | GTCTC | 4 cut(s) | 53, 255, 775, 850 |
| BcuI | ACTAGT | 1 cut(s) | 784 |
| BfaI | CTAG | 4 cut(s) | 122, 494, 785, 1104 |
| BfmI | CTRYAG | 2 cut(s) | 573, 1302 |
| BfoI | RGCGCY | 2 cut(s) | 90, 484 |
| BfuAI | ACCTGC | 1 cut(s) | 1089 |
| BisI | GCNGC | 1 cut(s) | 810 |
| BlsI | GCNGC | 1 cut(s) | 811 |
| BmcAI | AGTACT | 2 cut(s) | 120, 1214 |
| Bme1390I | CCNGG | 5 cut(s) | 153, 205, 438, 611, 767 |
| BmiI | GGNNCC | 5 cut(s) | 482, 525, 546, 913, 1046 |
| BmrFI | CCNGG | 5 cut(s) | 153, 205, 438, 611, 767 |
| BmrI | ACTGGG | 2 cut(s) | 110, 509 |
| BmsI | GCATC | 6 cut(s) | 747, 888, 1021, 1224, 1325, 1418 |
| BmuI | ACTGGG | 2 cut(s) | 110, 509 |
| BpiI | GAAGAC | 1 cut(s) | 640 |
| BpmI | CTGGAG | 1 cut(s) | 1031 |
| Bpu14I | TTCGAA | 1 cut(s) | 238 |
| BpuEI | CTTGAG | 1 cut(s) | 1445 |
| BpuMI | CCSGG | 1 cut(s) | 767 |
| BsaAI | YACGTR | 1 cut(s) | 1199 |
| BsaHI | GRCGYC | 1 cut(s) | 481 |
| BsaI | GGTCTC | 1 cut(s) | 775 |
| BsaJI | CCNNGG | 4 cut(s) | 75, 610, 1040, 1398 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 235, 265, 1021, 1051 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 260, 499, 1169 |
| Bse1I | ACTGG | 5 cut(s) | 116, 504, 637, 827, 1127 |
| BseBI | CCWGG | 4 cut(s) | 153, 205, 438, 611 |
| BseDI | CCNNGG | 4 cut(s) | 75, 610, 1040, 1398 |
| BseGI | GGATG | 2 cut(s) | 1184, 1276 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 260, 499, 1169 |
| BseMII | CTCAG | 2 cut(s) | 485, 786 |
| BseNI | ACTGG | 5 cut(s) | 116, 504, 637, 827, 1127 |
| BseRI | GAGGAG | 1 cut(s) | 847 |
| BseSI | GKGCMC | 2 cut(s) | 1198, 1442 |
| BseXI | GCAGC | 1 cut(s) | 796 |
| BseYI | CCCAGC | 1 cut(s) | 133 |
| Bsh1236I | CGCG | 1 cut(s) | 803 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1081 |
| BshNI | GGYRCC | 2 cut(s) | 480, 523 |
| BsiEI | CGRYCG | 1 cut(s) | 1081 |
| BsiHKAI | GWGCWC | 2 cut(s) | 380, 935 |
| BsiSI | CCGG | 1 cut(s) | 767 |
| BslFI | GGGAC | 1 cut(s) | 373 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 260, 499, 1169 |
| BsmAI | GTCTC | 4 cut(s) | 53, 255, 775, 850 |
| BsmBI | CGTCTC | 1 cut(s) | 850 |
| BsmFI | GGGAC | 1 cut(s) | 373 |
| Bso31I | GGTCTC | 1 cut(s) | 775 |
| Bsp119I | TTCGAA | 1 cut(s) | 238 |
| Bsp1286I | GDGCHC | 5 cut(s) | 8, 380, 935, 1198, 1442 |
| Bsp143I | GATC | 6 cut(s) | 103, 668, 686, 1201, 1341, 1444 |
| BspACI | CCGC | 5 cut(s) | 18, 140, 803, 1032, 1294 |
| BspCNI | CTCAG | 2 cut(s) | 484, 785 |
| BspFNI | CGCG | 1 cut(s) | 803 |
| BspLI | GGNNCC | 5 cut(s) | 482, 525, 546, 913, 1046 |
| BspMI | ACCTGC | 1 cut(s) | 1089 |
| BspPI | GGATC | 4 cut(s) | 676, 694, 1349, 1452 |
| BspT104I | TTCGAA | 1 cut(s) | 238 |
| BspT107I | GGYRCC | 2 cut(s) | 480, 523 |
| BspTNI | GGTCTC | 1 cut(s) | 775 |
| BsrBI | CCGCTC | 1 cut(s) | 1032 |
| BsrI | ACTGG | 5 cut(s) | 116, 504, 637, 827, 1127 |
| BssECI | CCNNGG | 4 cut(s) | 75, 610, 1040, 1398 |
| BssMI | GATC | 6 cut(s) | 103, 668, 686, 1201, 1341, 1444 |
| BssNAI | GTATAC | 1 cut(s) | 1364 |
| BssNI | GRCGYC | 1 cut(s) | 481 |
| BssT1I | CCWWGG | 1 cut(s) | 1040 |
| Bst1107I | GTATAC | 1 cut(s) | 1364 |
| Bst2UI | CCWGG | 4 cut(s) | 153, 205, 438, 611 |
| Bst4CI | ACNGT | 6 cut(s) | 382, 457, 862, 1079, 1361, 1399 |
| Bst6I | CTCTTC | 3 cut(s) | 41, 747, 1121 |
| BstACI | GRCGYC | 1 cut(s) | 481 |
| BstBAI | YACGTR | 1 cut(s) | 1199 |
| BstBI | TTCGAA | 1 cut(s) | 238 |
| BstC8I | GCNNGC | 3 cut(s) | 522, 989, 1353 |
| BstDEI | CTNAG | 5 cut(s) | 209, 471, 746, 772, 1094 |
| BstDSI | CCRYGG | 2 cut(s) | 75, 1398 |
| BstEII | GGTNACC | 1 cut(s) | 445 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1167 |
| BstF5I | GGATG | 2 cut(s) | 1184, 1276 |
| BstFNI | CGCG | 1 cut(s) | 803 |
| BstH2I | RGCGCY | 2 cut(s) | 90, 484 |
| BstHHI | GCGC | 3 cut(s) | 89, 483, 903 |
| BstKTI | GATC | 6 cut(s) | 106, 671, 689, 1204, 1344, 1447 |
| BstMAI | GTCTC | 4 cut(s) | 53, 255, 775, 850 |
| BstMBI | GATC | 6 cut(s) | 103, 668, 686, 1201, 1341, 1444 |
| BstMCI | CGRYCG | 1 cut(s) | 1081 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 489, 809, 959, 1104, 1313 |
| BstNI | CCWGG | 4 cut(s) | 153, 205, 438, 611 |
| BstNSI | RCATGY | 1 cut(s) | 1355 |
| BstPI | GGTNACC | 1 cut(s) | 445 |
| BstSCI | CCNGG | 5 cut(s) | 151, 203, 436, 609, 765 |
| BstSFI | CTRYAG | 2 cut(s) | 573, 1302 |
| BstSLI | GKGCMC | 2 cut(s) | 1198, 1442 |
| BstUI | CGCG | 1 cut(s) | 803 |
| BstV1I | GCAGC | 1 cut(s) | 796 |
| BstV2I | GAAGAC | 1 cut(s) | 640 |
| BstX2I | RGATCY | 1 cut(s) | 686 |
| BstYI | RGATCY | 1 cut(s) | 686 |
| BstZ17I | GTATAC | 1 cut(s) | 1364 |
| BtgI | CCRYGG | 2 cut(s) | 75, 1398 |
| BtgZI | GCGATG | 1 cut(s) | 911 |
| BtsCI | GGATG | 2 cut(s) | 1184, 1276 |
| BtsI | GCAGTG | 2 cut(s) | 671, 960 |
| BtsIMutI | CAGTG | 6 cut(s) | 338, 378, 497, 671, 960, 1332 |
| BveI | ACCTGC | 1 cut(s) | 1089 |
| Cac8I | GCNNGC | 3 cut(s) | 522, 989, 1353 |
| CfoI | GCGC | 3 cut(s) | 89, 483, 903 |
| CsiI | ACCWGGT | 1 cut(s) | 436 |
| Csp6I | GTAC | 5 cut(s) | 119, 185, 323, 820, 1213 |
| CviAII | CATG | 2 cut(s) | 1177, 1352 |
| CviQI | GTAC | 5 cut(s) | 119, 185, 323, 820, 1213 |
| DdeI | CTNAG | 5 cut(s) | 209, 471, 746, 772, 1094 |
| DinI | GGCGCC | 1 cut(s) | 482 |
| DpnI | GATC | 6 cut(s) | 105, 670, 688, 1203, 1343, 1446 |
| DpnII | GATC | 6 cut(s) | 103, 668, 686, 1201, 1341, 1444 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1080, 1163 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1080, 1163 |
| Eam1104I | CTCTTC | 3 cut(s) | 41, 747, 1121 |
| EarI | CTCTTC | 3 cut(s) | 41, 747, 1121 |
| Eco130I | CCWWGG | 1 cut(s) | 1040 |
| Eco24I | GRGCYC | 1 cut(s) | 8 |
| Eco31I | GGTCTC | 1 cut(s) | 775 |
| Eco57I | CTGAAG | 2 cut(s) | 344, 1347 |
| Eco72I | CACGTG | 1 cut(s) | 1199 |
| Eco91I | GGTNACC | 1 cut(s) | 445 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1167 |
| EcoO65I | GGTNACC | 1 cut(s) | 445 |
| EcoRII | CCWGG | 4 cut(s) | 151, 203, 436, 609 |
| EcoT14I | CCWWGG | 1 cut(s) | 1040 |
| EcoT38I | GRGCYC | 1 cut(s) | 8 |
| EgeI | GGCGCC | 1 cut(s) | 482 |
| EheI | GGCGCC | 1 cut(s) | 482 |
| ErhI | CCWWGG | 1 cut(s) | 1040 |
| Esp3I | CGTCTC | 1 cut(s) | 850 |
| FaeI | CATG | 2 cut(s) | 1180, 1355 |
| FaqI | GGGAC | 1 cut(s) | 373 |
| FatI | CATG | 2 cut(s) | 1176, 1351 |
| FauI | CCCGC | 3 cut(s) | 796, 1025, 1301 |
| FbaI | TGATCA | 1 cut(s) | 1201 |
| FblI | GTMKAC | 2 cut(s) | 1057, 1363 |
| Fnu4HI | GCNGC | 1 cut(s) | 810 |
| FokI | GGATG | 2 cut(s) | 1171, 1283 |
| FriOI | GRGCYC | 1 cut(s) | 8 |
| Fsp4HI | GCNGC | 1 cut(s) | 810 |
| FspAI | RTGCGCAY | 1 cut(s) | 902 |
| FspBI | CTAG | 4 cut(s) | 122, 494, 785, 1104 |
| FspI | TGCGCA | 1 cut(s) | 902 |
| GlaI | GCGC | 3 cut(s) | 88, 482, 902 |
| GluI | GCNGC | 1 cut(s) | 810 |
| GsaI | CCCAGC | 1 cut(s) | 137 |
| GsuI | CTGGAG | 1 cut(s) | 1031 |
| HaeII | RGCGCY | 2 cut(s) | 90, 484 |
| HapII | CCGG | 1 cut(s) | 767 |
| HhaI | GCGC | 3 cut(s) | 89, 483, 903 |
| Hin1I | GRCGYC | 1 cut(s) | 481 |
| Hin1II | CATG | 2 cut(s) | 1180, 1355 |
| Hin6I | GCGC | 3 cut(s) | 87, 481, 901 |
| HinP1I | GCGC | 3 cut(s) | 87, 481, 901 |
| HinfI | GANTC | 8 cut(s) | 264, 467, 504, 1036, 1129, 1138, 1157, 1415 |
| HpaII | CCGG | 1 cut(s) | 767 |
| HphI | GGTGA | 2 cut(s) | 439, 1173 |
| Hpy166II | GTNNAC | 5 cut(s) | 179, 233, 1058, 1254, 1364 |
| Hpy188I | TCNGA | 6 cut(s) | 363, 474, 1005, 1156, 1390, 1414 |
| Hpy188III | TCNNGA | 4 cut(s) | 107, 938, 1085, 1325 |
| Hpy8I | GTNNAC | 5 cut(s) | 179, 233, 1058, 1254, 1364 |
| Hpy99I | CGWCG | 1 cut(s) | 86 |
| HpyAV | CCTTC | 5 cut(s) | 21, 41, 611, 1234, 1382 |
| HpyCH4III | ACNGT | 6 cut(s) | 382, 457, 862, 1079, 1361, 1399 |
| HpyCH4IV | ACGT | 1 cut(s) | 1198 |
| HpyCH4V | TGCA | 7 cut(s) | 227, 760, 812, 928, 987, 1237, 1409 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 489, 809, 959, 1104, 1313 |
| HpyF3I | CTNAG | 5 cut(s) | 209, 471, 746, 772, 1094 |
| HpySE526I | ACGT | 1 cut(s) | 1198 |
| Hsp92I | GRCGYC | 1 cut(s) | 481 |
| Hsp92II | CATG | 2 cut(s) | 1180, 1355 |
| HspAI | GCGC | 3 cut(s) | 87, 481, 901 |
| KasI | GGCGCC | 1 cut(s) | 480 |
| Ksp22I | TGATCA | 1 cut(s) | 1201 |
| Kzo9I | GATC | 6 cut(s) | 103, 668, 686, 1201, 1341, 1444 |
| LmnI | GCTCC | 5 cut(s) | 375, 680, 806, 1029, 1050 |
| Lsp1109I | GCAGC | 1 cut(s) | 796 |
| LweI | GCATC | 6 cut(s) | 747, 888, 1021, 1224, 1325, 1418 |
| MabI | ACCWGGT | 1 cut(s) | 436 |
| MaeI | CTAG | 4 cut(s) | 122, 494, 785, 1104 |
| MaeII | ACGT | 1 cut(s) | 1198 |
| MaeIII | GTNAC | 3 cut(s) | 445, 1179, 1330 |
| MalI | GATC | 6 cut(s) | 105, 670, 688, 1203, 1343, 1446 |
| MbiI | CCGCTC | 1 cut(s) | 1032 |
| MboI | GATC | 6 cut(s) | 103, 668, 686, 1201, 1341, 1444 |
| MflI | RGATCY | 1 cut(s) | 686 |
| MhlI | GDGCHC | 5 cut(s) | 8, 380, 935, 1198, 1442 |
| Mly113I | GGCGCC | 1 cut(s) | 481 |
| MlyI | GAGTC | 4 cut(s) | 1045, 1132, 1138, 1151 |
| MnlI | CCTC | 6 cut(s) | 74, 286, 809, 825, 828, 928 |
| MseI | TTAA | 1 cut(s) | 888 |
| MslI | CAYNNNNRTG | 1 cut(s) | 383 |
| MspI | CCGG | 1 cut(s) | 767 |
| MspR9I | CCNGG | 5 cut(s) | 153, 205, 438, 611, 767 |
| MvaI | CCWGG | 4 cut(s) | 153, 205, 438, 611 |
| MvnI | CGCG | 1 cut(s) | 803 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 489, 809, 959, 1104, 1313 |
| NarI | GGCGCC | 1 cut(s) | 481 |
| NciI | CCSGG | 1 cut(s) | 767 |
| NdeII | GATC | 6 cut(s) | 103, 668, 686, 1201, 1341, 1444 |
| NlaIII | CATG | 2 cut(s) | 1180, 1355 |
| NlaIV | GGNNCC | 5 cut(s) | 482, 525, 546, 913, 1046 |
| NmuCI | GTSAC | 3 cut(s) | 445, 1179, 1330 |
| NsbI | TGCGCA | 1 cut(s) | 902 |
| NspI | RCATGY | 1 cut(s) | 1355 |
| NspV | TTCGAA | 1 cut(s) | 238 |
| PaeI | GCATGC | 1 cut(s) | 1355 |
| PfeI | GAWTC | 4 cut(s) | 264, 467, 504, 1415 |
| PflFI | GACNNNGTC | 1 cut(s) | 1077 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 260 |
| PkrI | GCNGC | 1 cut(s) | 811 |
| PleI | GAGTC | 4 cut(s) | 1044, 1132, 1137, 1151 |
| PluTI | GGCGCC | 1 cut(s) | 484 |
| PmaCI | CACGTG | 1 cut(s) | 1199 |
| PmlI | CACGTG | 1 cut(s) | 1199 |
| PpsI | GAGTC | 4 cut(s) | 1044, 1132, 1137, 1151 |
| Ppu21I | YACGTR | 1 cut(s) | 1199 |
| PsiI | TTATAA | 1 cut(s) | 596 |
| Psp6I | CCWGG | 4 cut(s) | 151, 203, 436, 609 |
| PspCI | CACGTG | 1 cut(s) | 1199 |
| PspEI | GGTNACC | 1 cut(s) | 445 |
| PspFI | CCCAGC | 1 cut(s) | 133 |
| PspGI | CCWGG | 4 cut(s) | 151, 203, 436, 609 |
| PspN4I | GGNNCC | 5 cut(s) | 482, 525, 546, 913, 1046 |
| PsuI | RGATCY | 1 cut(s) | 686 |
| PsyI | GACNNNGTC | 1 cut(s) | 1077 |
| RsaI | GTAC | 5 cut(s) | 120, 186, 324, 821, 1214 |
| RsaNI | GTAC | 5 cut(s) | 119, 185, 323, 820, 1213 |
| RseI | CAYNNNNRTG | 1 cut(s) | 383 |
| SaqAI | TTAA | 1 cut(s) | 888 |
| SatI | GCNGC | 1 cut(s) | 810 |
| Sau3AI | GATC | 6 cut(s) | 103, 668, 686, 1201, 1341, 1444 |
| ScaI | AGTACT | 2 cut(s) | 120, 1214 |
| SchI | GAGTC | 4 cut(s) | 1045, 1132, 1138, 1151 |
| ScrFI | CCNGG | 5 cut(s) | 153, 205, 438, 611, 767 |
| SduI | GDGCHC | 5 cut(s) | 8, 380, 935, 1198, 1442 |
| SexAI | ACCWGGT | 1 cut(s) | 436 |
| SfaNI | GCATC | 6 cut(s) | 747, 888, 1021, 1224, 1325, 1418 |
| SfcI | CTRYAG | 2 cut(s) | 573, 1302 |
| SfoI | GGCGCC | 1 cut(s) | 482 |
| SfuI | TTCGAA | 1 cut(s) | 238 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 383 |
| SmlI | CTYRAG | 1 cut(s) | 1460 |
| SmoI | CTYRAG | 1 cut(s) | 1460 |
| SpeI | ACTAGT | 1 cut(s) | 784 |
| SphI | GCATGC | 1 cut(s) | 1355 |
| SsiI | CCGC | 5 cut(s) | 18, 140, 803, 1032, 1294 |
| SspDI | GGCGCC | 1 cut(s) | 480 |
| SspMI | CTAG | 4 cut(s) | 122, 494, 785, 1104 |
| StyD4I | CCNGG | 5 cut(s) | 151, 203, 436, 609, 765 |
| StyI | CCWWGG | 1 cut(s) | 1040 |
| TaaI | ACNGT | 6 cut(s) | 382, 457, 862, 1079, 1361, 1399 |
| TaiI | ACGT | 1 cut(s) | 1201 |
| TaqI | TCGA | 5 cut(s) | 238, 939, 1136, 1347, 1447 |
| TaqII | GACCGA | 1 cut(s) | 433 |
| TatI | WGTACW | 3 cut(s) | 118, 322, 1212 |
| TfiI | GAWTC | 4 cut(s) | 264, 467, 504, 1415 |
| Tru1I | TTAA | 1 cut(s) | 888 |
| Tru9I | TTAA | 1 cut(s) | 888 |
| TscAI | CASTG | 6 cut(s) | 338, 385, 504, 678, 960, 1339 |
| TseFI | GTSAC | 3 cut(s) | 445, 1179, 1330 |
| TseI | GCWGC | 1 cut(s) | 809 |
| Tsp45I | GTSAC | 3 cut(s) | 445, 1179, 1330 |
| TspDTI | ATGAA | 4 cut(s) | 414, 444, 632, 689 |
| TspGWI | ACGGA | 2 cut(s) | 92, 1457 |
| TspRI | CASTG | 6 cut(s) | 338, 385, 504, 678, 960, 1339 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1077 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 260 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1167 |
| XapI | RAATTY | 3 cut(s) | 721, 736, 1088 |
| XceI | RCATGY | 1 cut(s) | 1355 |
| XmiI | GTMKAC | 2 cut(s) | 1057, 1363 |
| XspI | CTAG | 4 cut(s) | 122, 494, 785, 1104 |
| ZrmI | AGTACT | 2 cut(s) | 120, 1214 |