Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003134

Physical Location & Seq

Genomic Coordinates Reverse (-)

16934020 .. 16936430

Gene Structure 2411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G164800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 591 bp

ATGGCTACGAATAAGAGTACAGAGAAAGAGAAAGGCCCAGAAAAAGTCTCGAACAAAGGGAGATCATGCAAAGGAACACTTTATTATTCAACCGCTCTCAAATCCAAAGCTTACAATCCTATATGCCTCGGCGTTCCTCGCACCCTCCCTCAAGTGCCTGACTCAGTAGTTGCAGCAACTGAGATGGAGGCTTCTAAAGAGGATCGACATCTTGCTGATTTTCGTTATGCTTGTGCTGGTTACTCTATGTATTTGGATCGAATTAAAGAAGACCCTTCTCAAAAGAACACATCAGAATTGCCCGTTTGTGTTGGCTTGGAGCTTTTGGTTGGCAAAAGAATCCATAAAACGTCACCAGCTGCCGCTCCTCTTTCTACCCATGTTCATCACAAAGAGGATGCTCGTGAAGTCCCTCAGACTCAGAGGCACCAACCACCTACTCAATCTGCCGGAACTGTTTTCTTGAACAAGTTTTCAAGAAATGCAGATCTTGTTGCTTCAGGGGTGACTAAGAACGTGTATAAAGTAGGTAACTACATAAAAGGAAGTCTCTCAGATTTTTTGTTCCCATACAGAGGGAGATCAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

197

Amino Acids

21.63

Weight (kDa)

9.51

Isoelectric Point (pI)

45.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003134)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51100 AT3G51100 AT3G51100
fragaria_vesca	FvH4_1g12190 FvH4_1g12190 FvH4_2g10310 FvH4_2g10310
malus_domestica	MD02G1135800.v1.1 MD10G1064100.v1.1 MD15G1249400.v1.1
prunus_persica	Prupe.7G164800_v2.0.a1 Prupe.8G085800_v2.0.a1 Prupe.8G085800_v2.0.a1
pyrus_communis	pycom02g10710 pycom10g04970 pycom15g21980
rosa_chinensis	RchiOBHm_Chr2g0099951 RchiOBHm_Chr6g0267511
rosa_laevigata	RLG00000013996 RLG00000016925
rosa_multiflora	Rmu_sc0012005.1_g000010 Rmu_sc0013563.1_g000002
rosa_roxburghii	Rroxscaffold_2G00142710 Rroxscaffold_7G00200670
rosa_rugosa	Rorug02G0084200 Rorug06G0033100 Rorug06G0033100
rosa_samantha	Rh2AG133200 Rh2BG136800 Rh2CG138300 Rh2DG138700 Rh6AG154700 Rh6BG155400 Rh6CG150600 Rh6DG140600
rosa_wichuraiana	Rw2G010370 Rw6G013280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	426
AccBSI	CCGCTC	2 cut(s)	95, 365
AciI	CCGC	2 cut(s)	93, 363
AclWI	GGATC	2 cut(s)	210, 264
AcuI	CTGAAG	1 cut(s)	483
AfaI	GTAC	1 cut(s)	19
AfiI	CCNNNNNNNGG	1 cut(s)	575
AflIII	ACRYGT	1 cut(s)	516
AgsI	TTSAA	3 cut(s)	90, 466, 477
AluBI	AGCT	3 cut(s)	110, 322, 359
AluI	AGCT	3 cut(s)	110, 322, 359
Alw26I	GTCTC	2 cut(s)	52, 554
AlwI	GGATC	2 cut(s)	210, 264
AlwNI	CAGNNNCTG	1 cut(s)	179
AoxI	GGCC	1 cut(s)	34
ApeKI	GCWGC	2 cut(s)	173, 359
AspS9I	GGNCC	1 cut(s)	35
AsuHPI	GGTGA	2 cut(s)	345, 517
BanI	GGYRCC	1 cut(s)	426
BauI	CACGAG	1 cut(s)	402
BbsI	GAAGAC	1 cut(s)	276
BbvI	GCAGC	2 cut(s)	185, 346
BccI	CCATC	1 cut(s)	178
BcoDI	GTCTC	2 cut(s)	52, 554
BglII	AGATCT	1 cut(s)	487
BisI	GCNGC	3 cut(s)	174, 360, 363
BlsI	GCNGC	3 cut(s)	175, 361, 364
BmgT120I	GGNCC	1 cut(s)	35
BmiI	GGNNCC	1 cut(s)	428
BmsI	GCATC	1 cut(s)	388
BpiI	GAAGAC	1 cut(s)	276
BpuEI	CTTGAG	1 cut(s)	135
BsaBI	GATNNNNATC	1 cut(s)	207
BsaJI	CCNNGG	1 cut(s)	127
Bsc4I	CCNNNNNNNGG	1 cut(s)	575
Bse8I	GATNNNNATC	1 cut(s)	207
BseDI	CCNNGG	1 cut(s)	127
BseGI	GGATG	1 cut(s)	403
BseJI	GATNNNNATC	1 cut(s)	207
BseLI	CCNNNNNNNGG	1 cut(s)	575
BseMII	CTCAG	5 cut(s)	171, 177, 428, 434, 567
BseRI	GAGGAG	1 cut(s)	357
BseXI	GCAGC	2 cut(s)	185, 346
BshFI	GGCC	1 cut(s)	36
BshNI	GGYRCC	1 cut(s)	426
BsiSI	CCGG	1 cut(s)	450
BslFI	GGGAC	1 cut(s)	395
BslI	CCNNNNNNNGG	1 cut(s)	575
BsmAI	GTCTC	2 cut(s)	52, 554
BsmFI	GGGAC	1 cut(s)	395
BsnI	GGCC	1 cut(s)	36
Bsp143I	GATC	5 cut(s)	62, 202, 256, 487, 581
BspACI	CCGC	2 cut(s)	93, 363
BspANI	GGCC	1 cut(s)	36
BspCNI	CTCAG	5 cut(s)	172, 176, 427, 433, 566
BspLI	GGNNCC	1 cut(s)	428
BspPI	GGATC	2 cut(s)	210, 264
BspT107I	GGYRCC	1 cut(s)	426
BsrBI	CCGCTC	2 cut(s)	95, 365
BssECI	CCNNGG	1 cut(s)	127
BssMI	GATC	5 cut(s)	62, 202, 256, 487, 581
BssSI	CACGAG	1 cut(s)	402
Bst2BI	CACGAG	1 cut(s)	402
Bst4CI	ACNGT	1 cut(s)	457
BstDEI	CTNAG	6 cut(s)	163, 180, 414, 420, 510, 553
BstF5I	GGATG	1 cut(s)	403
BstKTI	GATC	5 cut(s)	65, 205, 259, 490, 584
BstMAI	GTCTC	2 cut(s)	52, 554
BstMBI	GATC	5 cut(s)	62, 202, 256, 487, 581
BstMWI	GCNNNNNNNGC	1 cut(s)	138
BstV1I	GCAGC	2 cut(s)	185, 346
BstV2I	GAAGAC	1 cut(s)	276
BstX2I	RGATCY	1 cut(s)	487
BstYI	RGATCY	1 cut(s)	487
BsuRI	GGCC	1 cut(s)	36
BtsCI	GGATG	1 cut(s)	403
CaiI	CAGNNNCTG	1 cut(s)	179
Cfr13I	GGNCC	1 cut(s)	35
Csp6I	GTAC	1 cut(s)	18
CviAII	CATG	2 cut(s)	66, 380
CviJI	RGCY	7 cut(s)	5, 36, 110, 191, 315, 322, 359
CviKI_1	RGCY	7 cut(s)	5, 36, 110, 191, 315, 322, 359
CviQI	GTAC	1 cut(s)	18
DdeI	CTNAG	6 cut(s)	163, 180, 414, 420, 510, 553
DpnI	GATC	5 cut(s)	64, 204, 258, 489, 583
DpnII	GATC	5 cut(s)	62, 202, 256, 487, 581
Eco57I	CTGAAG	1 cut(s)	483
FaeI	CATG	2 cut(s)	69, 383
FalI	AAGNNNNNCTT	2 cut(s)	63, 95
FaqI	GGGAC	1 cut(s)	395
FatI	CATG	2 cut(s)	65, 379
Fnu4HI	GCNGC	3 cut(s)	174, 360, 363
FokI	GGATG	1 cut(s)	410
Fsp4HI	GCNGC	3 cut(s)	174, 360, 363
GluI	GCNGC	3 cut(s)	174, 360, 363
HaeIII	GGCC	1 cut(s)	36
HapII	CCGG	1 cut(s)	450
Hin1II	CATG	2 cut(s)	69, 383
HindIII	AAGCTT	1 cut(s)	108
HinfI	GANTC	3 cut(s)	161, 339, 418
HpaII	CCGG	1 cut(s)	450
HphI	GGTGA	2 cut(s)	345, 517
Hpy188I	TCNGA	4 cut(s)	295, 417, 423, 556
Hpy188III	TCNNGA	4 cut(s)	49, 404, 463, 477
HpyAV	CCTTC	1 cut(s)	285
HpyCH4III	ACNGT	1 cut(s)	457
HpyCH4IV	ACGT	2 cut(s)	350, 516
HpyCH4V	TGCA	3 cut(s)	69, 173, 485
HpyF10VI	GCNNNNNNNGC	1 cut(s)	138
HpyF3I	CTNAG	6 cut(s)	163, 180, 414, 420, 510, 553
HpySE526I	ACGT	2 cut(s)	350, 516
Hsp92II	CATG	2 cut(s)	69, 383
Kzo9I	GATC	5 cut(s)	62, 202, 256, 487, 581
LmnI	GCTCC	2 cut(s)	319, 370
LpnPI	CCDG	6 cut(s)	51, 171, 222, 369, 463, 486
Lsp1109I	GCAGC	2 cut(s)	185, 346
LweI	GCATC	1 cut(s)	388
MaeII	ACGT	2 cut(s)	350, 516
MaeIII	GTNAC	4 cut(s)	239, 351, 505, 530
MalI	GATC	5 cut(s)	64, 204, 258, 489, 583
MbiI	CCGCTC	2 cut(s)	95, 365
MboI	GATC	5 cut(s)	62, 202, 256, 487, 581
MboII	GAAGA	1 cut(s)	281
MflI	RGATCY	1 cut(s)	487
MluCI	AATT	2 cut(s)	261, 296
MlyI	GAGTC	2 cut(s)	155, 412
MseI	TTAA	1 cut(s)	264
MspA1I	CMGCKG	1 cut(s)	359
MspI	CCGG	1 cut(s)	450
MwoI	GCNNNNNNNGC	1 cut(s)	138
NdeII	GATC	5 cut(s)	62, 202, 256, 487, 581
NlaIII	CATG	2 cut(s)	69, 383
NlaIV	GGNNCC	1 cut(s)	428
NmeAIII	GCCGAG	1 cut(s)	108
NmuCI	GTSAC	2 cut(s)	351, 505
PfeI	GAWTC	1 cut(s)	339
PkrI	GCNGC	3 cut(s)	175, 361, 364
PleI	GAGTC	2 cut(s)	155, 412
PpsI	GAGTC	2 cut(s)	155, 412
PspN4I	GGNNCC	1 cut(s)	428
PspPI	GGNCC	1 cut(s)	35
PstNI	CAGNNNCTG	1 cut(s)	179
PsuI	RGATCY	1 cut(s)	487
PvuII	CAGCTG	1 cut(s)	359
RsaI	GTAC	1 cut(s)	19
RsaNI	GTAC	1 cut(s)	18
SaqAI	TTAA	1 cut(s)	264
SatI	GCNGC	3 cut(s)	174, 360, 363
Sau3AI	GATC	5 cut(s)	62, 202, 256, 487, 581
Sau96I	GGNCC	1 cut(s)	35
SchI	GAGTC	2 cut(s)	155, 412
SetI	ASST	7 cut(s)	112, 324, 353, 361, 439, 519, 532
SfaNI	GCATC	1 cut(s)	388
SmlI	CTYRAG	1 cut(s)	150
SmoI	CTYRAG	1 cut(s)	150
Sse9I	AATT	2 cut(s)	261, 296
SsiI	CCGC	2 cut(s)	93, 363
TaaI	ACNGT	1 cut(s)	457
TaiI	ACGT	2 cut(s)	353, 519
TaqI	TCGA	3 cut(s)	50, 205, 259
TasI	AATT	2 cut(s)	261, 296
TatI	WGTACW	1 cut(s)	17
TauI	GCSGC	1 cut(s)	365
TfiI	GAWTC	1 cut(s)	339
Tru1I	TTAA	1 cut(s)	264
Tru9I	TTAA	1 cut(s)	264
TseFI	GTSAC	2 cut(s)	351, 505
TseI	GCWGC	2 cut(s)	173, 359
Tsp45I	GTSAC	2 cut(s)	351, 505
TspDTI	ATGAA	1 cut(s)	374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.