Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001791

Physical Location & Seq

Genomic Coordinates Forward (+)

20287576 .. 20288381

Gene Structure 806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G231700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 303 bp

ATGAGCAAAGGAACGGCAAGCTTCGGGAAGAGGAGGAACAAGACCCACACGCTGTGCGTGCGGTGCGGCCGCCGTAGCTTCCACCTTCAGAAGAGCCGTTGCGCCTCCTGTGGCTTCCCTTCCAGCCGTATCAGAAAATATAACTGGAGCGTGAAGGCGATCCGAAGAAAGACAACAGGGACTGGTAGAATGAGGTACCTTCGCCACGTTGCTGTGAGATTCAAGTTTAACTTCAGAGAAGGTACCGAGGCAGGTCCAAGAAAGAAGAGAGCTTCGTCATCGTCTCAAGCTTCGAGCCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0019538 GO:0022625 GO:0022626 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L37e

Protein Analysis

101

Amino Acids

11.44

Weight (kDa)

11.96

Isoelectric Point (pI)

63.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001791)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15250 AT1G15250 AT1G52300 AT3G16080 AT3G16080
fragaria_vesca	FvH4_2g36210 FvH4_6g31490
malus_domestica	MD08G1119100.v1.1 MD09G1210700.v1.1 MD15G1098400.v1.1 MD17G1193600.v1.1
prunus_persica	Prupe.1G453300_v2.0.a1 Prupe.3G069000_v2.0.a1 Prupe.7G231700_v2.0.a1
pyrus_communis	pycom08g09950 pycom09g12820 pycom15g09020 pycom17g19960
rosa_chinensis	RchiOBHm_Chr0c09g0498131 RchiOBHm_Chr2g0090341 RchiOBHm_Chr2g0138351 RchiOBHm_Chr3g0483621 RchiOBHm_Chr3g0495931 RchiOBHm_Chr5g0044271 RchiOBHm_Chr6g0305681 RchiOBHm_Chr7g0217481
rosa_multiflora	Rmu_sc0002475.1_g000002
rosa_roxburghii	Rroxscaffold_2G00106310 Rroxscaffold_7G00162450
rosa_rugosa	Rorug02G0150500 Rorug02G0150600 Rorug02G0169500 Rorug02G0351700 Rorug03G0288100 Rorug05G0567600 Rorug06G0342900 Rorug07G0234700
rosa_samantha	Rh2AG399800 Rh2CG386100 Rh2DG419600 Rh6AG454600 Rh6BG446900 Rh6CG468500 Rh6DG455100
rosa_wichuraiana	Rw2G032530 Rw3G028400 Rw6G039640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	242
Acc65I	GGTACC	2 cut(s)	195, 242
AccB1I	GGYRCC	2 cut(s)	195, 242
AciI	CCGC	3 cut(s)	61, 66, 70
AclWI	GGATC	1 cut(s)	154
AcoI	YGGCCR	1 cut(s)	67
AcuI	CTGAAG	2 cut(s)	71, 217
AdeI	CACNNNGTG	1 cut(s)	54
AfaI	GTAC	2 cut(s)	197, 244
AgsI	TTSAA	1 cut(s)	223
AluBI	AGCT	4 cut(s)	21, 78, 272, 290
AluI	AGCT	4 cut(s)	21, 78, 272, 290
Alw26I	GTCTC	1 cut(s)	288
AlwI	GGATC	1 cut(s)	154
AlwNI	CAGNNNCTG	1 cut(s)	182
AoxI	GGCC	1 cut(s)	67
Asp718I	GGTACC	2 cut(s)	195, 242
AspLEI	GCGC	1 cut(s)	104
AspS9I	GGNCC	1 cut(s)	254
AvaII	GGWCC	1 cut(s)	254
BanI	GGYRCC	2 cut(s)	195, 242
BceAI	ACGGC	4 cut(s)	30, 57, 81, 111
BcoDI	GTCTC	1 cut(s)	288
BfuAI	ACCTGC	1 cut(s)	242
BisI	GCNGC	2 cut(s)	67, 70
BlsI	GCNGC	2 cut(s)	68, 71
Bme18I	GGWCC	1 cut(s)	254
BmgT120I	GGNCC	1 cut(s)	254
BmiI	GGNNCC	2 cut(s)	197, 244
BpmI	CTGGAG	1 cut(s)	166
BpuEI	CTTGAG	1 cut(s)	270
BsaJI	CCNNGG	1 cut(s)	246
Bse1I	ACTGG	2 cut(s)	149, 187
BseDI	CCNNGG	1 cut(s)	246
BseNI	ACTGG	2 cut(s)	149, 187
BseRI	GAGGAG	1 cut(s)	46
BseX3I	CGGCCG	1 cut(s)	67
Bsh1285I	CGRYCG	1 cut(s)	70
BshFI	GGCC	1 cut(s)	69
BshNI	GGYRCC	2 cut(s)	195, 242
BsiEI	CGRYCG	1 cut(s)	70
BslFI	GGGAC	1 cut(s)	193
BsmAI	GTCTC	1 cut(s)	288
BsmBI	CGTCTC	1 cut(s)	288
BsmFI	GGGAC	1 cut(s)	193
BsnI	GGCC	1 cut(s)	69
Bsp143I	GATC	1 cut(s)	159
BspACI	CCGC	3 cut(s)	61, 66, 70
BspANI	GGCC	1 cut(s)	69
BspLI	GGNNCC	2 cut(s)	197, 244
BspMI	ACCTGC	1 cut(s)	242
BspPI	GGATC	1 cut(s)	154
BspQI	GCTCTTC	1 cut(s)	86
BspT107I	GGYRCC	2 cut(s)	195, 242
BsrI	ACTGG	2 cut(s)	149, 187
BssECI	CCNNGG	1 cut(s)	246
BssMI	GATC	1 cut(s)	159
Bst6I	CTCTTC	3 cut(s)	23, 86, 260
BstC8I	GCNNGC	2 cut(s)	19, 59
BstHHI	GCGC	1 cut(s)	104
BstKTI	GATC	1 cut(s)	162
BstMAI	GTCTC	1 cut(s)	288
BstMBI	GATC	1 cut(s)	159
BstMCI	CGRYCG	1 cut(s)	70
BstMWI	GCNNNNNNNGC	3 cut(s)	58, 63, 75
BstZI	CGGCCG	1 cut(s)	67
BsuRI	GGCC	1 cut(s)	69
BveI	ACCTGC	1 cut(s)	242
Cac8I	GCNNGC	2 cut(s)	19, 59
CaiI	CAGNNNCTG	1 cut(s)	182
CciNI	GCGGCCGC	1 cut(s)	67
CfoI	GCGC	1 cut(s)	104
Cfr13I	GGNCC	1 cut(s)	254
Csp6I	GTAC	2 cut(s)	196, 243
CviJI	RGCY	9 cut(s)	21, 69, 78, 96, 114, 126, 272, 290, 297
CviKI_1	RGCY	9 cut(s)	21, 69, 78, 96, 114, 126, 272, 290, 297
CviQI	GTAC	2 cut(s)	196, 243
DpnI	GATC	1 cut(s)	161
DpnII	GATC	1 cut(s)	159
DraIII	CACNNNGTG	1 cut(s)	54
EaeI	YGGCCR	1 cut(s)	67
EagI	CGGCCG	1 cut(s)	67
Eam1104I	CTCTTC	3 cut(s)	23, 86, 260
EarI	CTCTTC	3 cut(s)	23, 86, 260
EclXI	CGGCCG	1 cut(s)	67
Eco47I	GGWCC	1 cut(s)	254
Eco52I	CGGCCG	1 cut(s)	67
Eco57I	CTGAAG	2 cut(s)	71, 217
Esp3I	CGTCTC	1 cut(s)	288
FaiI	YATR	1 cut(s)	141
FalI	AAGNNNNNCTT	2 cut(s)	215, 247
FaqI	GGGAC	1 cut(s)	193
Fnu4HI	GCNGC	2 cut(s)	67, 70
Fsp4HI	GCNGC	2 cut(s)	67, 70
GlaI	GCGC	1 cut(s)	103
GluI	GCNGC	2 cut(s)	67, 70
GsuI	CTGGAG	1 cut(s)	166
HaeIII	GGCC	1 cut(s)	69
HhaI	GCGC	1 cut(s)	104
Hin6I	GCGC	1 cut(s)	102
HinP1I	GCGC	1 cut(s)	102
HindIII	AAGCTT	2 cut(s)	19, 288
HinfI	GANTC	1 cut(s)	219
Hpy188I	TCNGA	5 cut(s)	90, 134, 164, 236, 302
Hpy188III	TCNNGA	1 cut(s)	25
HpyAV	CCTTC	5 cut(s)	95, 129, 148, 209, 233
HpyCH4IV	ACGT	1 cut(s)	207
HpyF10VI	GCNNNNNNNGC	3 cut(s)	58, 63, 75
HpySE526I	ACGT	1 cut(s)	207
HspAI	GCGC	1 cut(s)	102
KpnI	GGTACC	2 cut(s)	199, 246
Kzo9I	GATC	1 cut(s)	159
LguI	GCTCTTC	1 cut(s)	86
LmnI	GCTCC	1 cut(s)	147
LpnPI	CCDG	6 cut(s)	121, 130, 136, 162, 168, 237
MaeII	ACGT	1 cut(s)	207
MalI	GATC	1 cut(s)	161
MboI	GATC	1 cut(s)	159
MboII	GAAGA	4 cut(s)	40, 103, 177, 277
MnlI	CCTC	5 cut(s)	24, 27, 115, 186, 241
MseI	TTAA	1 cut(s)	228
MwoI	GCNNNNNNNGC	3 cut(s)	58, 63, 75
NdeII	GATC	1 cut(s)	159
NlaIV	GGNNCC	2 cut(s)	197, 244
NotI	GCGGCCGC	1 cut(s)	67
PciSI	GCTCTTC	1 cut(s)	86
PfeI	GAWTC	1 cut(s)	219
PkrI	GCNGC	2 cut(s)	68, 71
PspN4I	GGNNCC	2 cut(s)	197, 244
PspPI	GGNCC	1 cut(s)	254
PstNI	CAGNNNCTG	1 cut(s)	182
RsaI	GTAC	2 cut(s)	197, 244
RsaNI	GTAC	2 cut(s)	196, 243
SapI	GCTCTTC	1 cut(s)	86
SaqAI	TTAA	1 cut(s)	228
SatI	GCNGC	2 cut(s)	67, 70
Sau3AI	GATC	1 cut(s)	159
Sau96I	GGNCC	1 cut(s)	254
SinI	GGWCC	1 cut(s)	254
SmlI	CTYRAG	1 cut(s)	285
SmoI	CTYRAG	1 cut(s)	285
SsiI	CCGC	3 cut(s)	61, 66, 70
TaiI	ACGT	1 cut(s)	210
TaqI	TCGA	1 cut(s)	293
TauI	GCSGC	2 cut(s)	69, 72
TfiI	GAWTC	1 cut(s)	219
Tru1I	TTAA	1 cut(s)	228
Tru9I	TTAA	1 cut(s)	228
VpaK11BI	GGWCC	1 cut(s)	254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.