eukaryotic translation initiation factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21160 AT1G76720 AT1G76720 AT1G76810 AT2G27700 AT2G27700 |
| fragaria_vesca | FvH4_2g13940 FvH4_2g13940 FvH4_2g13940 FvH4_4g36100 FvH4_4g36312 |
| malus_domestica | MD05G1023200.v1.1 MD09G1087100.v1.1 MD10G1024100.v1.1 |
| prunus_persica | Prupe.2G099300_v2.0.a1 Prupe.8G027900_v2.0.a1 |
| pyrus_communis | pycom05g01470 pycom09g01240 pycom10g01600 |
| rosa_chinensis | RchiOBHm_Chr4g0445721 RchiOBHm_Chr6g0275701 |
| rosa_laevigata | RLG00000005714 RLG00000013337 RLG00000013444 |
| rosa_multiflora | Rmu_co8469881.1_g000001 Rmu_sc0003637.1_g000011 Rmu_sc0003637.1_g000012 Rmu_sc0007122.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00193000 |
| rosa_rugosa | Rorug04G0365200 Rorug06G0095700 |
| rosa_samantha | Rh4AG426100 Rh4CG453100 Rh4DG434300 Rh6AG207600 Rh6BG210300 Rh6CG214100 Rh6DG203400 |
| rosa_wichuraiana | Rw4G036490 Rw6G018100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2901 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1291 |
| AatII | GACGTC | 1 cut(s) | 3534 |
| Acc36I | ACCTGC | 4 cut(s) | 55, 1198, 2174, 2780 |
| AccII | CGCG | 1 cut(s) | 27 |
| AciI | CCGC | 8 cut(s) | 41, 680, 710, 1301, 1364, 2611, 2776, 3863 |
| AclWI | GGATC | 2 cut(s) | 3791, 3804 |
| AcoI | YGGCCR | 1 cut(s) | 1392 |
| AcsI | RAATTY | 4 cut(s) | 181, 1955, 2723, 3973 |
| AcuI | CTGAAG | 3 cut(s) | 2025, 2573, 3965 |
| AcyI | GRCGYC | 1 cut(s) | 3531 |
| AfaI | GTAC | 6 cut(s) | 1857, 1946, 2850, 3049, 3423, 3519 |
| AfeI | AGCGCT | 1 cut(s) | 325 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 620, 1253, 1521, 1729, 3497, 3622 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3376 |
| AhlI | ACTAGT | 1 cut(s) | 1025 |
| AjnI | CCWGG | 4 cut(s) | 1631, 2560, 2584, 3582 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 957, 989, 2320, 2352, 3767, 3799 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3804, 3836 |
| Alw21I | GWGCWC | 1 cut(s) | 3762 |
| Alw26I | GTCTC | 3 cut(s) | 132, 1277, 1672 |
| AlwI | GGATC | 2 cut(s) | 3791, 3804 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1199, 1355, 1367, 1376, 2339 |
| Ama87I | CYCGRG | 1 cut(s) | 3615 |
| Aor51HI | AGCGCT | 1 cut(s) | 325 |
| ApoI | RAATTY | 4 cut(s) | 181, 1955, 2723, 3973 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2964, 4130 |
| AspLEI | GCGC | 5 cut(s) | 76, 201, 326, 800, 2489 |
| AspS9I | GGNCC | 9 cut(s) | 1513, 1987, 2392, 2557, 2997, 3158, 3326, 3512, 3613 |
| AsuC2I | CCSGG | 4 cut(s) | 1247, 3616, 3617, 4079 |
| AsuNHI | GCTAGC | 1 cut(s) | 656 |
| AvaI | CYCGRG | 1 cut(s) | 3615 |
| AvaII | GGWCC | 4 cut(s) | 1987, 2557, 2997, 3158 |
| BaeGI | GKGCMC | 1 cut(s) | 2592 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 822, 855, 1814, 1847 |
| BalI | TGGCCA | 1 cut(s) | 1394 |
| BamHI | GGATCC | 1 cut(s) | 3796 |
| BauI | CACGAG | 2 cut(s) | 2591, 3330 |
| BbsI | GAAGAC | 3 cut(s) | 912, 3375, 3476 |
| Bbv12I | GWGCWC | 1 cut(s) | 3762 |
| BccI | CCATC | 4 cut(s) | 83, 521, 1247, 3587 |
| BceAI | ACGGC | 1 cut(s) | 598 |
| BciT130I | CCWGG | 4 cut(s) | 1633, 2562, 2586, 3584 |
| BciVI | GTATCC | 2 cut(s) | 850, 2441 |
| BcnI | CCSGG | 4 cut(s) | 1247, 3616, 3617, 4079 |
| BcoDI | GTCTC | 3 cut(s) | 132, 1277, 1672 |
| BcuI | ACTAGT | 1 cut(s) | 1025 |
| BfaI | CTAG | 9 cut(s) | 657, 852, 1026, 1163, 1412, 1521, 1991, 3437, 3458 |
| BfmI | CTRYAG | 4 cut(s) | 48, 1191, 1356, 1368 |
| BfoI | RGCGCY | 2 cut(s) | 77, 327 |
| BfuAI | ACCTGC | 4 cut(s) | 55, 1198, 2174, 2780 |
| BfuI | GTATCC | 2 cut(s) | 850, 2441 |
| BlpI | GCTNAGC | 1 cut(s) | 1158 |
| Bme1390I | CCNGG | 8 cut(s) | 1247, 1633, 2562, 2586, 3584, 3616, 3617, 4079 |
| Bme18I | GGWCC | 4 cut(s) | 1987, 2557, 2997, 3158 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3376 |
| BmeT110I | CYCGRG | 1 cut(s) | 3615 |
| BmgT120I | GGNCC | 9 cut(s) | 1513, 1987, 2392, 2557, 2997, 3158, 3326, 3512, 3613 |
| BmrFI | CCNGG | 8 cut(s) | 1247, 1633, 2562, 2586, 3584, 3616, 3617, 4079 |
| BmrI | ACTGGG | 1 cut(s) | 1886 |
| BmtI | GCTAGC | 1 cut(s) | 660 |
| BmuI | ACTGGG | 1 cut(s) | 1886 |
| BpiI | GAAGAC | 3 cut(s) | 912, 3375, 3476 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1771, 1803, 1931, 1963, 2126, 2158 |
| BpmI | CTGGAG | 3 cut(s) | 1751, 2484, 3459 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1125, 1595, 1938 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1158 |
| BpuEI | CTTGAG | 4 cut(s) | 114, 3692, 3746, 4027 |
| BpuMI | CCSGG | 4 cut(s) | 1247, 3616, 3617, 4079 |
| BsaHI | GRCGYC | 1 cut(s) | 3531 |
| BsaWI | WCCGGW | 3 cut(s) | 415, 740, 2269 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2864, 2894, 3405, 3435, 3804, 3834 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 620, 1253, 1521, 1729, 3497, 3622 |
| Bse1I | ACTGG | 4 cut(s) | 163, 1892, 2410, 3543 |
| Bse3DI | GCAATG | 6 cut(s) | 803, 1743, 2785, 2805, 3452, 3831 |
| BseBI | CCWGG | 4 cut(s) | 1633, 2562, 2586, 3584 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 620, 1253, 1521, 1729, 3497, 3622 |
| BseMI | GCAATG | 6 cut(s) | 803, 1743, 2785, 2805, 3452, 3831 |
| BseNI | ACTGG | 4 cut(s) | 163, 1892, 2410, 3543 |
| BseRI | GAGGAG | 6 cut(s) | 137, 416, 419, 1226, 1577, 1601 |
| BseSI | GKGCMC | 1 cut(s) | 2592 |
| BseYI | CCCAGC | 1 cut(s) | 2082 |
| BsgI | GTGCAG | 3 cut(s) | 2202, 3062, 3240 |
| Bsh1236I | CGCG | 1 cut(s) | 27 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3762 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3615 |
| BsiSI | CCGG | 6 cut(s) | 416, 741, 1247, 2270, 3616, 4078 |
| BslFI | GGGAC | 7 cut(s) | 410, 1387, 2543, 3097, 3171, 3859, 3982 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 620, 1253, 1521, 1729, 3497, 3622 |
| BsmAI | GTCTC | 3 cut(s) | 132, 1277, 1672 |
| BsmFI | GGGAC | 7 cut(s) | 410, 1387, 2543, 3097, 3171, 3859, 3982 |
| BsmI | GAATGC | 1 cut(s) | 899 |
| BsoBI | CYCGRG | 1 cut(s) | 3615 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2592, 3762 |
| Bsp143I | GATC | 3 cut(s) | 3130, 3679, 3796 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1158 |
| Bsp68I | TCGCGA | 1 cut(s) | 27 |
| BspACI | CCGC | 8 cut(s) | 41, 680, 710, 1301, 1364, 2611, 2776, 3863 |
| BspFNI | CGCG | 1 cut(s) | 27 |
| BspHI | TCATGA | 2 cut(s) | 3121, 3534 |
| BspMAI | CTGCAG | 4 cut(s) | 52, 1195, 1360, 1372 |
| BspMI | ACCTGC | 4 cut(s) | 55, 1198, 2174, 2780 |
| BspOI | GCTAGC | 1 cut(s) | 660 |
| BspPI | GGATC | 2 cut(s) | 3791, 3804 |
| BsrDI | GCAATG | 6 cut(s) | 803, 1743, 2785, 2805, 3452, 3831 |
| BsrI | ACTGG | 4 cut(s) | 163, 1892, 2410, 3543 |
| BssMI | GATC | 3 cut(s) | 3130, 3679, 3796 |
| BssNI | GRCGYC | 1 cut(s) | 3531 |
| BssSI | CACGAG | 2 cut(s) | 2591, 3330 |
| BssT1I | CCWWGG | 3 cut(s) | 618, 3079, 3444 |
| Bst2BI | CACGAG | 2 cut(s) | 2591, 3330 |
| Bst2UI | CCWGG | 4 cut(s) | 1633, 2562, 2586, 3584 |
| Bst4CI | ACNGT | 6 cut(s) | 1288, 1933, 2930, 2985, 3052, 3779 |
| BstACI | GRCGYC | 1 cut(s) | 3531 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 1199, 1355, 1367, 1376, 1769, 2204 |
| BstC8I | GCNNGC | 5 cut(s) | 658, 1691, 3116, 3152, 3304 |
| BstFNI | CGCG | 1 cut(s) | 27 |
| BstH2I | RGCGCY | 2 cut(s) | 77, 327 |
| BstHHI | GCGC | 5 cut(s) | 76, 201, 326, 800, 2489 |
| BstKTI | GATC | 3 cut(s) | 3133, 3682, 3799 |
| BstMAI | GTCTC | 3 cut(s) | 132, 1277, 1672 |
| BstMBI | GATC | 3 cut(s) | 3130, 3679, 3796 |
| BstNI | CCWGG | 4 cut(s) | 1633, 2562, 2586, 3584 |
| BstNSI | RCATGY | 3 cut(s) | 1496, 3154, 3296 |
| BstSCI | CCNGG | 8 cut(s) | 1245, 1631, 2560, 2584, 3582, 3614, 3615, 4077 |
| BstSFI | CTRYAG | 4 cut(s) | 48, 1191, 1356, 1368 |
| BstSLI | GKGCMC | 1 cut(s) | 2592 |
| BstUI | CGCG | 1 cut(s) | 27 |
| BstV2I | GAAGAC | 3 cut(s) | 912, 3375, 3476 |
| BstX2I | RGATCY | 1 cut(s) | 3796 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3583 |
| BstYI | RGATCY | 1 cut(s) | 3796 |
| BsuI | GTATCC | 2 cut(s) | 850, 2441 |
| BtsI | GCAGTG | 2 cut(s) | 3050, 3306 |
| BtsIMutI | CAGTG | 5 cut(s) | 1899, 1989, 3050, 3306, 3550 |
| BtuMI | TCGCGA | 1 cut(s) | 27 |
| BveI | ACCTGC | 4 cut(s) | 55, 1198, 2174, 2780 |
| Cac8I | GCNNGC | 5 cut(s) | 658, 1691, 3116, 3152, 3304 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1199, 1355, 1367, 1376, 2339 |
| CciI | TCATGA | 2 cut(s) | 3121, 3534 |
| CfoI | GCGC | 5 cut(s) | 76, 201, 326, 800, 2489 |
| Cfr13I | GGNCC | 9 cut(s) | 1513, 1987, 2392, 2557, 2997, 3158, 3326, 3512, 3613 |
| Cfr9I | CCCGGG | 1 cut(s) | 3615 |
| Csp6I | GTAC | 6 cut(s) | 1856, 1945, 2849, 3048, 3422, 3518 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 283, 318, 1857, 1892 |
| CviQI | GTAC | 6 cut(s) | 1856, 1945, 2849, 3048, 3422, 3518 |
| DpnI | GATC | 3 cut(s) | 3132, 3681, 3798 |
| DpnII | GATC | 3 cut(s) | 3130, 3679, 3796 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1291 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3376 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1291 |
| EaeI | YGGCCR | 1 cut(s) | 1392 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3376 |
| Eco130I | CCWWGG | 3 cut(s) | 618, 3079, 3444 |
| Eco147I | AGGCCT | 2 cut(s) | 3078, 3692 |
| Eco32I | GATATC | 1 cut(s) | 3661 |
| Eco47I | GGWCC | 4 cut(s) | 1987, 2557, 2997, 3158 |
| Eco47III | AGCGCT | 1 cut(s) | 325 |
| Eco57I | CTGAAG | 3 cut(s) | 2025, 2573, 3965 |
| Eco88I | CYCGRG | 1 cut(s) | 3615 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1513, 2557, 3158, 3326, 3512 |
| EcoRI | GAATTC | 1 cut(s) | 2723 |
| EcoRII | CCWGG | 4 cut(s) | 1631, 2560, 2584, 3582 |
| EcoRV | GATATC | 1 cut(s) | 3661 |
| EcoT14I | CCWWGG | 3 cut(s) | 618, 3079, 3444 |
| EcoT22I | ATGCAT | 3 cut(s) | 889, 1774, 2667 |
| ErhI | CCWWGG | 3 cut(s) | 618, 3079, 3444 |
| FaqI | GGGAC | 7 cut(s) | 410, 1387, 2543, 3097, 3171, 3859, 3982 |
| FauI | CCCGC | 1 cut(s) | 48 |
| FspBI | CTAG | 9 cut(s) | 657, 852, 1026, 1163, 1412, 1521, 1991, 3437, 3458 |
| GlaI | GCGC | 5 cut(s) | 75, 200, 325, 799, 2488 |
| GsaI | CCCAGC | 1 cut(s) | 2086 |
| GsuI | CTGGAG | 3 cut(s) | 1751, 2484, 3459 |
| HaeII | RGCGCY | 2 cut(s) | 77, 327 |
| HapII | CCGG | 6 cut(s) | 416, 741, 1247, 2270, 3616, 4078 |
| HhaI | GCGC | 5 cut(s) | 76, 201, 326, 800, 2489 |
| Hin1I | GRCGYC | 1 cut(s) | 3531 |
| Hin6I | GCGC | 5 cut(s) | 74, 199, 324, 798, 2487 |
| HinP1I | GCGC | 5 cut(s) | 74, 199, 324, 798, 2487 |
| HincII | GTYRAC | 4 cut(s) | 390, 1057, 2101, 2656 |
| HindII | GTYRAC | 4 cut(s) | 390, 1057, 2101, 2656 |
| HindIII | AAGCTT | 2 cut(s) | 189, 1691 |
| HpaI | GTTAAC | 3 cut(s) | 390, 1057, 2101 |
| HpaII | CCGG | 6 cut(s) | 416, 741, 1247, 2270, 3616, 4078 |
| Hpy99I | CGWCG | 2 cut(s) | 32, 1728 |
| HpyCH4III | ACNGT | 6 cut(s) | 1288, 1933, 2930, 2985, 3052, 3779 |
| HpyCH4IV | ACGT | 1 cut(s) | 3531 |
| HpySE526I | ACGT | 1 cut(s) | 3531 |
| Hsp92I | GRCGYC | 1 cut(s) | 3531 |
| HspAI | GCGC | 5 cut(s) | 74, 199, 324, 798, 2487 |
| KspAI | GTTAAC | 3 cut(s) | 390, 1057, 2101 |
| Kzo9I | GATC | 3 cut(s) | 3130, 3679, 3796 |
| LmnI | GCTCC | 5 cut(s) | 418, 1531, 1885, 2872, 3446 |
| MaeI | CTAG | 9 cut(s) | 657, 852, 1026, 1163, 1412, 1521, 1991, 3437, 3458 |
| MaeII | ACGT | 1 cut(s) | 3531 |
| MaeIII | GTNAC | 6 cut(s) | 154, 2613, 2691, 2979, 3166, 3601 |
| MalI | GATC | 3 cut(s) | 3132, 3681, 3798 |
| MboI | GATC | 3 cut(s) | 3130, 3679, 3796 |
| MfeI | CAATTG | 4 cut(s) | 2787, 3090, 3801, 4092 |
| MflI | RGATCY | 1 cut(s) | 3796 |
| MhlI | GDGCHC | 2 cut(s) | 2592, 3762 |
| MlsI | TGGCCA | 1 cut(s) | 1394 |
| MluNI | TGGCCA | 1 cut(s) | 1394 |
| MlyI | GAGTC | 9 cut(s) | 134, 539, 1301, 2043, 2603, 2699, 2748, 3466, 3841 |
| Mox20I | TGGCCA | 1 cut(s) | 1394 |
| Mph1103I | ATGCAT | 3 cut(s) | 889, 1774, 2667 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2964, 4130 |
| MscI | TGGCCA | 1 cut(s) | 1394 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1869, 3240 |
| Msp20I | TGGCCA | 1 cut(s) | 1394 |
| MspA1I | CMGCKG | 3 cut(s) | 1196, 1355, 1364 |
| MspI | CCGG | 6 cut(s) | 416, 741, 1247, 2270, 3616, 4078 |
| MspR9I | CCNGG | 8 cut(s) | 1247, 1633, 2562, 2586, 3584, 3616, 3617, 4079 |
| MunI | CAATTG | 4 cut(s) | 2787, 3090, 3801, 4092 |
| Mva1269I | GAATGC | 1 cut(s) | 899 |
| MvaI | CCWGG | 4 cut(s) | 1633, 2562, 2586, 3584 |
| MvnI | CGCG | 1 cut(s) | 27 |
| NciI | CCSGG | 4 cut(s) | 1247, 3616, 3617, 4079 |
| NdeII | GATC | 3 cut(s) | 3130, 3679, 3796 |
| NheI | GCTAGC | 1 cut(s) | 656 |
| NmuCI | GTSAC | 3 cut(s) | 2613, 2691, 3601 |
| NruI | TCGCGA | 1 cut(s) | 27 |
| NsiI | ATGCAT | 3 cut(s) | 889, 1774, 2667 |
| NspI | RCATGY | 3 cut(s) | 1496, 3154, 3296 |
| PaeI | GCATGC | 1 cut(s) | 3154 |
| PagI | TCATGA | 2 cut(s) | 3121, 3534 |
| PasI | CCCWGGG | 1 cut(s) | 2585 |
| PceI | AGGCCT | 2 cut(s) | 3078, 3692 |
| PctI | GAATGC | 1 cut(s) | 899 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2964, 4130 |
| PfeI | GAWTC | 8 cut(s) | 845, 1150, 1439, 1979, 2015, 2336, 2965, 3728 |
| PleI | GAGTC | 9 cut(s) | 133, 539, 1300, 2042, 2602, 2698, 2748, 3466, 3841 |
| PpsI | GAGTC | 9 cut(s) | 133, 539, 1300, 2042, 2602, 2698, 2748, 3466, 3841 |
| PpuMI | RGGWCCY | 2 cut(s) | 2557, 3158 |
| PsiI | TTATAA | 1 cut(s) | 2901 |
| Psp5II | RGGWCCY | 2 cut(s) | 2557, 3158 |
| Psp6I | CCWGG | 4 cut(s) | 1631, 2560, 2584, 3582 |
| PspFI | CCCAGC | 1 cut(s) | 2082 |
| PspGI | CCWGG | 4 cut(s) | 1631, 2560, 2584, 3582 |
| PspPI | GGNCC | 9 cut(s) | 1513, 1987, 2392, 2557, 2997, 3158, 3326, 3512, 3613 |
| PspPPI | RGGWCCY | 2 cut(s) | 2557, 3158 |
| PstI | CTGCAG | 4 cut(s) | 52, 1195, 1360, 1372 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1199, 1355, 1367, 1376, 2339 |
| PsuI | RGATCY | 1 cut(s) | 3796 |
| PvuII | CAGCTG | 2 cut(s) | 1196, 1355 |
| RruI | TCGCGA | 1 cut(s) | 27 |
| RsaI | GTAC | 6 cut(s) | 1857, 1946, 2850, 3049, 3423, 3519 |
| RsaNI | GTAC | 6 cut(s) | 1856, 1945, 2849, 3048, 3422, 3518 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1869, 3240 |
| Sau3AI | GATC | 3 cut(s) | 3130, 3679, 3796 |
| Sau96I | GGNCC | 9 cut(s) | 1513, 1987, 2392, 2557, 2997, 3158, 3326, 3512, 3613 |
| SbfI | CCTGCAGG | 1 cut(s) | 52 |
| SchI | GAGTC | 9 cut(s) | 134, 539, 1301, 2043, 2603, 2699, 2748, 3466, 3841 |
| ScrFI | CCNGG | 8 cut(s) | 1247, 1633, 2562, 2586, 3584, 3616, 3617, 4079 |
| SdaI | CCTGCAGG | 1 cut(s) | 52 |
| SduI | GDGCHC | 2 cut(s) | 2592, 3762 |
| SfcI | CTRYAG | 4 cut(s) | 48, 1191, 1356, 1368 |
| SinI | GGWCC | 4 cut(s) | 1987, 2557, 2997, 3158 |
| SmaI | CCCGGG | 1 cut(s) | 3617 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1869, 3240 |
| SmlI | CTYRAG | 4 cut(s) | 129, 3707, 3761, 4042 |
| SmoI | CTYRAG | 4 cut(s) | 129, 3707, 3761, 4042 |
| SpeI | ACTAGT | 1 cut(s) | 1025 |
| SphI | GCATGC | 1 cut(s) | 3154 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 52 |
| SseBI | AGGCCT | 2 cut(s) | 3078, 3692 |
| SsiI | CCGC | 8 cut(s) | 41, 680, 710, 1301, 1364, 2611, 2776, 3863 |
| SspI | AATATT | 1 cut(s) | 3487 |
| SspMI | CTAG | 9 cut(s) | 657, 852, 1026, 1163, 1412, 1521, 1991, 3437, 3458 |
| StuI | AGGCCT | 2 cut(s) | 3078, 3692 |
| StyD4I | CCNGG | 8 cut(s) | 1245, 1631, 2560, 2584, 3582, 3614, 3615, 4077 |
| StyI | CCWWGG | 3 cut(s) | 618, 3079, 3444 |
| TaaI | ACNGT | 6 cut(s) | 1288, 1933, 2930, 2985, 3052, 3779 |
| TaiI | ACGT | 1 cut(s) | 3534 |
| TatI | WGTACW | 1 cut(s) | 1944 |
| TauI | GCSGC | 3 cut(s) | 1304, 1367, 2778 |
| TfiI | GAWTC | 8 cut(s) | 845, 1150, 1439, 1979, 2015, 2336, 2965, 3728 |
| TscAI | CASTG | 5 cut(s) | 1899, 1989, 3050, 3313, 3550 |
| TseFI | GTSAC | 3 cut(s) | 2613, 2691, 3601 |
| Tsp45I | GTSAC | 3 cut(s) | 2613, 2691, 3601 |
| TspGWI | ACGGA | 4 cut(s) | 882, 1585, 2504, 2735 |
| TspMI | CCCGGG | 1 cut(s) | 3615 |
| TspRI | CASTG | 5 cut(s) | 1899, 1989, 3050, 3313, 3550 |
| VpaK11BI | GGWCC | 4 cut(s) | 1987, 2557, 2997, 3158 |
| XapI | RAATTY | 4 cut(s) | 181, 1955, 2723, 3973 |
| XceI | RCATGY | 3 cut(s) | 1496, 3154, 3296 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2402 |
| XmaI | CCCGGG | 1 cut(s) | 3615 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2964, 4130 |
| XspI | CTAG | 9 cut(s) | 657, 852, 1026, 1163, 1412, 1521, 1991, 3437, 3458 |
| ZraI | GACGTC | 1 cut(s) | 3532 |
| Zsp2I | ATGCAT | 3 cut(s) | 889, 1774, 2667 |