Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0002582

Physical Location & Seq

Genomic Coordinates Forward (+)

68616041 .. 68619032

Gene Structure 2992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG453100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGTATCATCACAAGAAGAAGTGTATGAGGACAAATCGGAAAATTCAAGTTGGGCATGTAGTGGAGGAAAAATCACTTCAAGTTGTGCATGAGTCTGTGGAAGAGATTAGAATCGTAGAAGATGACAAAGGCAATGAATGGGATCCCTATAGTTGGGGGGATCAGGCACCAATCTCTAGCGGCACAGAGAAGCTAAGAGAAACTGAGGTTGAGGTTGAAGTTGACATGAAGAAAGATGCTGATGTGGAAGGACCGAGTTCAGTTTCTGCTGTTGAAGAGAGTGAAGAAGAGAACTTTCTGCGTTCCCCGATTTGCTGCGTTATGGGGCATGTTGATGCTGGTAAAACCAAGTTGCTGGATTGCATCCGCGGCACGAATGTTCAGAAAGGTGAGGCTGGTGGTATTACTCAGCAGATTGGTGCAACTTATCTTCCTGCTGAGAACATACAAGAGAGAATCAAGGAGCTGAAAGCTGCTGATGATAAGCACATGAAGGTACCGGGTCTGTTGCTTATTGATACCCCAGGGCATGAGCCATTCACTAAGTTACGGTCACGGGGTTCTGGTTTGTGTGACATTGCTGTTTTGGTTGTTGACATTATGGATGGCTTAAAGCCTCAGACTATAGAGTCACTCAATCTTTTGAAGTCAAGGAATACAGAATTCATTGTTGCATTGAATAAGGTGGACAGACTCAACGGGTGGAAGCCTTGTCCAAGTGCACCAATTATCAAGGCAATGAAGCAGCAATCTCAGGATGTGAAAGATGAGTTCAATATGAGAATCGTGCAGATTGTCACTCAGTTCAAGGAGCAGGGGATTAATACTAAATTGAACGTTGATGAGAACAAACGGATGAGAGAAACATACAGCATTGTACCTATAAGTGCCAAGAGTGGTGAAGGCATCCCAGATTTGTTGTCACTGATGGTTTATTGGACCCAGAAATCTATGACAGAGAAACTGACTTACAGCAATGAAGTGCGGTGTACAGTGTTGGAGGTCAAGTATGTTGAAGGCCTTGGGACAACAATTGATGTTATATTGGTTAATGGGGTGCTTCGCCGTGGAGATCAAATAGTTGCTTGTGGTAACCATGGTACTCCTATTGTTACTAGGATTCAATCTTTGTTGACCCCAGAGCCGATGAAAGAGCTTCGTGTGAAGGGAAAGTATCAGCATCATAGTGAAATCAGAGCTGCGCAGGCTATCAAGATCACATCACCACAGGGGTTTGAACATGCTATTGCTGGCACTGCTCTCTATGTAGTAGGGCCTGACGATGACTTGGAAGAGGTCAAGGAAGCAGCTATGGAAGACATGATGAAGTCAGTCCTTGTGAACAACAACAAGAATGGTAGTAGTAGTACTGCTGGTGACGGAGGAGTTTGTGCACAAGCATCAACTCTAGGCTCTTTGGAAGCAATGCTAGAGTTTCTGAAGGCCCAAGAAGTTAATATTCCAGTTCGTGGAATTGGCATAGGCCCTATACAGAAAAAGGATGTCAAGAAGGCCAGTGTGATGCTCGAAAAGAAGATCTTGGCATTTGATGTCAAAGTGACACCGGAGGCCCAGAAACTTGCAGATGAATTGGGTGTGAAGATTTTTGTTGGTGATATAATCCATGAGGTGATTAAGGCCTATATGAAAAACCTCAAGGAGGAAAAGGAGAAGGAGTTAGCTGCTGTGGATGAGGAAGCTGTCTTTCCATGTGTGCTCAAGATTTTACCCAACTGTGTTTTCAACAAGAAGGATCCAATTATAGTTGGGGTTAAAGTTCTTCAAGGCATTGTCAAGGTTGGGACTCCACTTTGTATTCCTCAGAGGGACTTTGTGGTTATTGGGCGCATTGAGTCGATTGAGAATAACCATAAACGTGTTGATATGGTCAACAAGGGGAAGGAAGTTTGCATTAAGATAGTTGGGACGAATCCTAATCAGCAGCAGGTGATGTTTGGTAGGCACTTTAACATTGAAGATGAACTTGTCAGCCATATCTCAAGGAGGTCGATTGATGTGCTAAAATCATGCTACCGGAACGACCTGTCGCAGGAGGAGTGGAAGCTGGTTTTGAAATTGAAGACTATTTTCAAGATACTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0002181 GO:0002183 GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0019538 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0033290 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0070993 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 ko03013 map00195 map01100 map03013

Pfam Domains

Protein Families

GTP_EFTU GTP_EFTU_D2 IF-2

Protein Analysis

700

Amino Acids

77.95

Weight (kDa)

6.37

Isoelectric Point (pI)

32.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	103 - 314	2.3e-34	Elongation factor Tu GTP binding domain
MMR_HSR1	PF01926	106 - 228	4.6e-06	50S ribosome-binding GTPase
GTP_EFTU_D2	PF03144	342 - 387	1.8e-06	Elongation factor Tu domain 2
IF-2	PF11987	458 - 547	5.4e-17	Translation-initiation factor 2
GTP_EFTU_D4	PF14578	570 - 662	3.6e-17	Elongation factor Tu domain 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002582)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21160 AT1G76720 AT1G76720 AT1G76810 AT2G27700 AT2G27700
fragaria_vesca	FvH4_2g13940 FvH4_2g13940 FvH4_2g13940 FvH4_4g36100 FvH4_4g36312
malus_domestica	MD05G1023200.v1.1 MD09G1087100.v1.1 MD10G1024100.v1.1
prunus_persica	Prupe.2G099300_v2.0.a1 Prupe.8G027900_v2.0.a1
pyrus_communis	pycom05g01470 pycom09g01240 pycom10g01600
rosa_chinensis	RchiOBHm_Chr4g0445721 RchiOBHm_Chr6g0275701
rosa_laevigata	RLG00000005714 RLG00000013337 RLG00000013444
rosa_multiflora	Rmu_co8469881.1_g000001 Rmu_sc0003637.1_g000011 Rmu_sc0003637.1_g000012 Rmu_sc0007122.1_g000003
rosa_roxburghii	Rroxscaffold_7G00193000
rosa_rugosa	Rorug04G0365200 Rorug06G0095700
rosa_samantha	Rh4AG426100 Rh4CG453100 Rh4DG434300 Rh6AG207600 Rh6BG210300 Rh6CG214100 Rh6DG203400
rosa_wichuraiana	Rw4G036490 Rw6G018100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1936
AasI	GACNNNNNNGTC	1 cut(s)	628
Acc16I	TGCGCA	1 cut(s)	1203
Acc36I	ACCTGC	1 cut(s)	1936
Acc65I	GGTACC	1 cut(s)	496
AccB1I	GGYRCC	2 cut(s)	166, 496
AccB7I	CCANNNNNTGG	1 cut(s)	1469
AccII	CGCG	1 cut(s)	369
AciI	CCGC	4 cut(s)	180, 367, 369, 985
AclI	AACGTT	1 cut(s)	837
AclWI	GGATC	5 cut(s)	137, 150, 168, 1748, 1761
AcsI	RAATTY	2 cut(s)	42, 662
AcuI	CTGAAG	1 cut(s)	1460
AfaI	GTAC	5 cut(s)	498, 879, 991, 1102, 1369
AfiI	CCNNNNNNNGG	4 cut(s)	153, 1469, 1660, 2050
AflIII	ACRYGT	1 cut(s)	1876
AjnI	CCWGG	1 cut(s)	523
AjuI	GAANNNNNNNTTGG	2 cut(s)	1724, 1756
AluBI	AGCT	9 cut(s)	193, 466, 473, 1156, 1199, 1310, 1682, 1700, 2065
AluI	AGCT	9 cut(s)	193, 466, 473, 1156, 1199, 1310, 1682, 1700, 2065
Alw21I	GWGCWC	3 cut(s)	724, 1396, 1719
Alw44I	GTGCAC	2 cut(s)	720, 1392
AlwI	GGATC	5 cut(s)	137, 150, 168, 1748, 1761
AlwNI	CAGNNNCTG	1 cut(s)	266
AoxI	GGCC	7 cut(s)	1018, 1274, 1443, 1483, 1512, 1569, 1638
ApaLI	GTGCAC	2 cut(s)	720, 1392
ApeKI	GCWGC	7 cut(s)	315, 473, 745, 1199, 1307, 1682, 1942
ApoI	RAATTY	2 cut(s)	42, 662
AseI	ATTAAT	1 cut(s)	822
Asp718I	GGTACC	1 cut(s)	496
AspLEI	GCGC	2 cut(s)	1204, 1848
AspS9I	GGNCC	6 cut(s)	251, 939, 1274, 1444, 1484, 1570
AsuC2I	CCSGG	1 cut(s)	501
AsuHPI	GGTGA	7 cut(s)	401, 911, 1215, 1388, 1625, 1642, 1960
AvaII	GGWCC	2 cut(s)	251, 939
BaeGI	GKGCMC	2 cut(s)	724, 1396
BamHI	GGATCC	2 cut(s)	142, 1753
BanI	GGYRCC	2 cut(s)	166, 496
BbsI	GAAGAC	2 cut(s)	1323, 2087
Bbv12I	GWGCWC	3 cut(s)	724, 1396, 1719
BbvI	GCAGC	7 cut(s)	302, 460, 757, 1186, 1319, 1669, 1954
BccI	CCATC	2 cut(s)	599, 922
BceAI	ACGGC	1 cut(s)	1050
BcgI	CGANNNNNNTGC	2 cut(s)	1999, 2033
BciT130I	CCWGG	1 cut(s)	525
BcnI	CCSGG	1 cut(s)	501
BfaI	CTAG	4 cut(s)	177, 1116, 1409, 1430
BfmI	CTRYAG	2 cut(s)	148, 624
BfuAI	ACCTGC	1 cut(s)	1936
BglII	AGATCT	1 cut(s)	1536
BisI	GCNGC	9 cut(s)	181, 316, 370, 474, 746, 1200, 1308, 1683, 1943
BlsI	GCNGC	9 cut(s)	182, 317, 371, 475, 747, 1201, 1309, 1684, 1944
BmcAI	AGTACT	1 cut(s)	1369
Bme1390I	CCNGG	2 cut(s)	501, 525
Bme18I	GGWCC	2 cut(s)	251, 939
BmgT120I	GGNCC	6 cut(s)	251, 939, 1274, 1444, 1484, 1570
BmiI	GGNNCC	5 cut(s)	144, 168, 498, 941, 1755
BmrFI	CCNGG	2 cut(s)	501, 525
BmsI	GCATC	7 cut(s)	226, 325, 372, 915, 1189, 1409, 1512
BpiI	GAAGAC	2 cut(s)	1323, 2087
BpuEI	CTTGAG	3 cut(s)	1640, 1703, 1984
BpuMI	CCSGG	1 cut(s)	501
BsaBI	GATNNNNATC	1 cut(s)	110
BsaJI	CCNNGG	6 cut(s)	367, 523, 524, 1021, 1066, 1096
BsaWI	WCCGGW	2 cut(s)	1564, 2034
BsaXI	ACNNNNNCTCC	4 cut(s)	992, 1022, 1661, 1691
Bsc4I	CCNNNNNNNGG	4 cut(s)	153, 1469, 1660, 2050
Bse1I	ACTGG	2 cut(s)	1463, 1515
Bse3DI	GCAATG	5 cut(s)	139, 576, 744, 982, 1431
Bse8I	GATNNNNATC	1 cut(s)	110
BseBI	CCWGG	1 cut(s)	525
BseDI	CCNNGG	6 cut(s)	367, 523, 524, 1021, 1066, 1096
BseGI	GGATG	7 cut(s)	363, 610, 763, 861, 906, 1507, 1696
BseJI	GATNNNNATC	1 cut(s)	110
BseLI	CCNNNNNNNGG	4 cut(s)	153, 1469, 1660, 2050
BseMI	GCAATG	5 cut(s)	139, 576, 744, 982, 1431
BseMII	CTCAG	7 cut(s)	195, 422, 429, 632, 767, 815, 1835
BseNI	ACTGG	2 cut(s)	1463, 1515
BseRI	GAGGAG	2 cut(s)	1398, 2069
BseSI	GKGCMC	2 cut(s)	724, 1396
BseXI	GCAGC	7 cut(s)	302, 460, 757, 1186, 1319, 1669, 1954
BsgI	GTGCAG	1 cut(s)	809
Bsh1236I	CGCG	1 cut(s)	369
BshFI	GGCC	7 cut(s)	1020, 1276, 1445, 1485, 1514, 1571, 1640
BshNI	GGYRCC	2 cut(s)	166, 496
BsiHKAI	GWGCWC	3 cut(s)	724, 1396, 1719
BsiSI	CCGG	3 cut(s)	500, 1565, 2035
BslFI	GGGAC	4 cut(s)	1039, 1816, 1841, 1939
BslI	CCNNNNNNNGG	4 cut(s)	153, 1469, 1660, 2050
BsmFI	GGGAC	4 cut(s)	1039, 1816, 1841, 1939
BsnI	GGCC	7 cut(s)	1020, 1276, 1445, 1485, 1514, 1571, 1640
Bsp1286I	GDGCHC	3 cut(s)	724, 1396, 1719
Bsp1407I	TGTACA	1 cut(s)	989
Bsp143I	GATC	6 cut(s)	142, 160, 1072, 1215, 1536, 1753
Bsp19I	CCATGG	1 cut(s)	1096
BspACI	CCGC	4 cut(s)	180, 367, 369, 985
BspANI	GGCC	7 cut(s)	1020, 1276, 1445, 1485, 1514, 1571, 1640
BspCNI	CTCAG	7 cut(s)	196, 421, 430, 631, 766, 814, 1834
BspFNI	CGCG	1 cut(s)	369
BspLI	GGNNCC	5 cut(s)	144, 168, 498, 941, 1755
BspMI	ACCTGC	1 cut(s)	1936
BspPI	GGATC	5 cut(s)	137, 150, 168, 1748, 1761
BspT107I	GGYRCC	2 cut(s)	166, 496
BsrDI	GCAATG	5 cut(s)	139, 576, 744, 982, 1431
BsrGI	TGTACA	1 cut(s)	989
BsrI	ACTGG	2 cut(s)	1463, 1515
BssECI	CCNNGG	6 cut(s)	367, 523, 524, 1021, 1066, 1096
BssMI	GATC	6 cut(s)	142, 160, 1072, 1215, 1536, 1753
BssT1I	CCWWGG	2 cut(s)	1021, 1096
Bst2UI	CCWGG	1 cut(s)	525
Bst4CI	ACNGT	4 cut(s)	552, 994, 1736, 2100
Bst6I	CTCTTC	4 cut(s)	96, 270, 282, 1287
BstAUI	TGTACA	1 cut(s)	989
BstC8I	GCNNGC	2 cut(s)	1206, 1252
BstDEI	CTNAG	9 cut(s)	194, 204, 408, 438, 543, 618, 753, 801, 1821
BstDSI	CCRYGG	3 cut(s)	367, 1066, 1096
BstEII	GGTNACC	1 cut(s)	1091
BstENI	CCTNNNNNAGG	2 cut(s)	1658, 2048
BstF5I	GGATG	7 cut(s)	363, 610, 763, 861, 906, 1507, 1696
BstFNI	CGCG	1 cut(s)	369
BstHHI	GCGC	2 cut(s)	1204, 1848
BstKTI	GATC	6 cut(s)	145, 163, 1075, 1218, 1539, 1756
BstMBI	GATC	6 cut(s)	142, 160, 1072, 1215, 1536, 1753
BstMWI	GCNNNNNNNGC	3 cut(s)	369, 1205, 1256
BstNI	CCWGG	1 cut(s)	525
BstNSI	RCATGY	3 cut(s)	59, 332, 1244
BstPI	GGTNACC	1 cut(s)	1091
BstSCI	CCNGG	2 cut(s)	499, 523
BstSFI	CTRYAG	2 cut(s)	148, 624
BstSLI	GKGCMC	2 cut(s)	724, 1396
BstUI	CGCG	1 cut(s)	369
BstV1I	GCAGC	7 cut(s)	302, 460, 757, 1186, 1319, 1669, 1954
BstV2I	GAAGAC	2 cut(s)	1323, 2087
BstX2I	RGATCY	3 cut(s)	142, 1536, 1753
BstXI	CCANNNNNNTGG	1 cut(s)	355
BstYI	RGATCY	3 cut(s)	142, 1536, 1753
BsuRI	GGCC	7 cut(s)	1020, 1276, 1445, 1485, 1514, 1571, 1640
BtgI	CCRYGG	3 cut(s)	367, 1066, 1096
BtsCI	GGATG	7 cut(s)	363, 610, 763, 861, 906, 1507, 1696
BtsI	GCAGTG	1 cut(s)	1254
BtsIMutI	CAGTG	4 cut(s)	923, 999, 1254, 1522
BveI	ACCTGC	1 cut(s)	1936
Cac8I	GCNNGC	2 cut(s)	1206, 1252
CaiI	CAGNNNCTG	1 cut(s)	266
CfoI	GCGC	2 cut(s)	1204, 1848
Cfr13I	GGNCC	6 cut(s)	251, 939, 1274, 1444, 1484, 1570
Cfr42I	CCGCGG	1 cut(s)	370
Csp6I	GTAC	5 cut(s)	497, 878, 990, 1101, 1368
CviQI	GTAC	5 cut(s)	497, 878, 990, 1101, 1368
DdeI	CTNAG	9 cut(s)	194, 204, 408, 438, 543, 618, 753, 801, 1821
DpnI	GATC	6 cut(s)	144, 162, 1074, 1217, 1538, 1755
DpnII	GATC	6 cut(s)	142, 160, 1072, 1215, 1536, 1753
DrdI	GACNNNNNNGTC	1 cut(s)	628
DseDI	GACNNNNNNGTC	1 cut(s)	628
Eam1104I	CTCTTC	4 cut(s)	96, 270, 282, 1287
EarI	CTCTTC	4 cut(s)	96, 270, 282, 1287
Eco130I	CCWWGG	2 cut(s)	1021, 1096
Eco147I	AGGCCT	2 cut(s)	1020, 1640
Eco47I	GGWCC	2 cut(s)	251, 939
Eco57I	CTGAAG	1 cut(s)	1460
Eco91I	GGTNACC	1 cut(s)	1091
EcoNI	CCTNNNNNAGG	2 cut(s)	1658, 2048
EcoO109I	RGGNCCY	2 cut(s)	1274, 1484
EcoO65I	GGTNACC	1 cut(s)	1091
EcoRI	GAATTC	1 cut(s)	662
EcoRII	CCWGG	1 cut(s)	523
EcoT14I	CCWWGG	2 cut(s)	1021, 1096
ErhI	CCWWGG	2 cut(s)	1021, 1096
FalI	AAGNNNNNCTT	4 cut(s)	1523, 1555, 1968, 2000
FaqI	GGGAC	4 cut(s)	1039, 1816, 1841, 1939
Fnu4HI	GCNGC	9 cut(s)	181, 316, 370, 474, 746, 1200, 1308, 1683, 1943
FokI	GGATG	7 cut(s)	350, 617, 770, 868, 893, 1514, 1703
Fsp4HI	GCNGC	9 cut(s)	181, 316, 370, 474, 746, 1200, 1308, 1683, 1943
FspBI	CTAG	4 cut(s)	177, 1116, 1409, 1430
FspI	TGCGCA	1 cut(s)	1203
GlaI	GCGC	2 cut(s)	1203, 1847
GluI	GCNGC	9 cut(s)	181, 316, 370, 474, 746, 1200, 1308, 1683, 1943
HaeIII	GGCC	7 cut(s)	1020, 1276, 1445, 1485, 1514, 1571, 1640
HapII	CCGG	3 cut(s)	500, 1565, 2035
HhaI	GCGC	2 cut(s)	1204, 1848
Hin6I	GCGC	2 cut(s)	1202, 1846
HinP1I	GCGC	2 cut(s)	1202, 1846
HincII	GTYRAC	4 cut(s)	223, 595, 1134, 1891
HindII	GTYRAC	4 cut(s)	223, 595, 1134, 1891
HpaII	CCGG	3 cut(s)	500, 1565, 2035
HphI	GGTGA	7 cut(s)	401, 911, 1215, 1388, 1625, 1642, 1960
Hpy166II	GTNNAC	9 cut(s)	223, 595, 688, 722, 990, 1134, 1342, 1394, 1891
Hpy188I	TCNGA	6 cut(s)	39, 384, 621, 1196, 1440, 1824
Hpy188III	TCNNGA	5 cut(s)	755, 1213, 1507, 1720, 2092
Hpy8I	GTNNAC	9 cut(s)	223, 595, 688, 722, 990, 1134, 1342, 1394, 1891
HpyCH4III	ACNGT	4 cut(s)	552, 994, 1736, 2100
HpyCH4IV	ACGT	2 cut(s)	837, 1876
HpyCH4V	TGCA	9 cut(s)	88, 363, 422, 674, 722, 790, 1394, 1583, 1911
HpyF10VI	GCNNNNNNNGC	3 cut(s)	369, 1205, 1256
HpyF3I	CTNAG	9 cut(s)	194, 204, 408, 438, 543, 618, 753, 801, 1821
HpySE526I	ACGT	2 cut(s)	837, 1876
HspAI	GCGC	2 cut(s)	1202, 1846
KpnI	GGTACC	1 cut(s)	500
KspI	CCGCGG	1 cut(s)	370
Kzo9I	GATC	6 cut(s)	142, 160, 1072, 1215, 1536, 1753
LmnI	GCTCC	2 cut(s)	463, 811
Lsp1109I	GCAGC	7 cut(s)	302, 460, 757, 1186, 1319, 1669, 1954
LweI	GCATC	7 cut(s)	226, 325, 372, 915, 1189, 1409, 1512
MaeI	CTAG	4 cut(s)	177, 1116, 1409, 1430
MaeII	ACGT	2 cut(s)	837, 1876
MalI	GATC	6 cut(s)	144, 162, 1074, 1217, 1538, 1755
MboI	GATC	6 cut(s)	142, 160, 1072, 1215, 1536, 1753
MfeI	CAATTG	1 cut(s)	1032
MflI	RGATCY	3 cut(s)	142, 1536, 1753
MhlI	GDGCHC	3 cut(s)	724, 1396, 1719
MluCI	AATT	9 cut(s)	42, 662, 726, 830, 1032, 1473, 1589, 1758, 2075
MlyI	GAGTC	5 cut(s)	101, 638, 687, 1798, 1862
MmeI	TCCRAC	1 cut(s)	978
MseI	TTAA	8 cut(s)	611, 822, 1050, 1455, 1635, 1773, 1914, 1968
MslI	CAYNNNNRTG	3 cut(s)	333, 1185, 1875
MspA1I	CMGCKG	1 cut(s)	369
MspI	CCGG	3 cut(s)	500, 1565, 2035
MspR9I	CCNGG	2 cut(s)	501, 525
MunI	CAATTG	1 cut(s)	1032
MvaI	CCWGG	1 cut(s)	525
MvnI	CGCG	1 cut(s)	369
MwoI	GCNNNNNNNGC	3 cut(s)	369, 1205, 1256
NciI	CCSGG	1 cut(s)	501
NcoI	CCATGG	1 cut(s)	1096
NdeII	GATC	6 cut(s)	142, 160, 1072, 1215, 1536, 1753
NlaIV	GGNNCC	5 cut(s)	144, 168, 498, 941, 1755
NmuCI	GTSAC	7 cut(s)	552, 572, 630, 796, 921, 1376, 1558
NsbI	TGCGCA	1 cut(s)	1203
NspI	RCATGY	3 cut(s)	59, 332, 1244
PaqCI	CACCTGC	1 cut(s)	1936
PasI	CCCWGGG	1 cut(s)	524
PceI	AGGCCT	2 cut(s)	1020, 1640
PfeI	GAWTC	5 cut(s)	111, 456, 783, 1120, 1930
PflMI	CCANNNNNTGG	1 cut(s)	1469
PkrI	GCNGC	9 cut(s)	182, 317, 371, 475, 747, 1201, 1309, 1684, 1944
PleI	GAGTC	5 cut(s)	100, 637, 687, 1798, 1861
PpsI	GAGTC	5 cut(s)	100, 637, 687, 1798, 1861
PshBI	ATTAAT	1 cut(s)	822
Psp1406I	AACGTT	1 cut(s)	837
Psp6I	CCWGG	1 cut(s)	523
PspEI	GGTNACC	1 cut(s)	1091
PspGI	CCWGG	1 cut(s)	523
PspN4I	GGNNCC	5 cut(s)	144, 168, 498, 941, 1755
PspPI	GGNCC	6 cut(s)	251, 939, 1274, 1444, 1484, 1570
PstNI	CAGNNNCTG	1 cut(s)	266
PsuI	RGATCY	3 cut(s)	142, 1536, 1753
RsaI	GTAC	5 cut(s)	498, 879, 991, 1102, 1369
RsaNI	GTAC	5 cut(s)	497, 878, 990, 1101, 1368
RseI	CAYNNNNRTG	3 cut(s)	333, 1185, 1875
SacII	CCGCGG	1 cut(s)	370
SaqAI	TTAA	8 cut(s)	611, 822, 1050, 1455, 1635, 1773, 1914, 1968
SatI	GCNGC	9 cut(s)	181, 316, 370, 474, 746, 1200, 1308, 1683, 1943
Sau3AI	GATC	6 cut(s)	142, 160, 1072, 1215, 1536, 1753
Sau96I	GGNCC	6 cut(s)	251, 939, 1274, 1444, 1484, 1570
ScaI	AGTACT	1 cut(s)	1369
SchI	GAGTC	5 cut(s)	101, 638, 687, 1798, 1862
ScrFI	CCNGG	2 cut(s)	501, 525
SduI	GDGCHC	3 cut(s)	724, 1396, 1719
SfaNI	GCATC	7 cut(s)	226, 325, 372, 915, 1189, 1409, 1512
SfcI	CTRYAG	2 cut(s)	148, 624
Sfr303I	CCGCGG	1 cut(s)	370
SgrBI	CCGCGG	1 cut(s)	370
SinI	GGWCC	2 cut(s)	251, 939
SmiMI	CAYNNNNRTG	3 cut(s)	333, 1185, 1875
SmlI	CTYRAG	3 cut(s)	1655, 1718, 1999
SmoI	CTYRAG	3 cut(s)	1655, 1718, 1999
Sse9I	AATT	9 cut(s)	42, 662, 726, 830, 1032, 1473, 1589, 1758, 2075
SseBI	AGGCCT	2 cut(s)	1020, 1640
SsiI	CCGC	4 cut(s)	180, 367, 369, 985
SspI	AATATT	1 cut(s)	1459
SspMI	CTAG	4 cut(s)	177, 1116, 1409, 1430
StuI	AGGCCT	2 cut(s)	1020, 1640
StyD4I	CCNGG	2 cut(s)	499, 523
StyI	CCWWGG	2 cut(s)	1021, 1096
TaaI	ACNGT	4 cut(s)	552, 994, 1736, 2100
TaiI	ACGT	2 cut(s)	840, 1879
TaqI	TCGA	3 cut(s)	1527, 1856, 2009
TaqII	GACCGA	1 cut(s)	268
TasI	AATT	9 cut(s)	42, 662, 726, 830, 1032, 1473, 1589, 1758, 2075
TatI	WGTACW	2 cut(s)	989, 1367
TauI	GCSGC	2 cut(s)	183, 372
TfiI	GAWTC	5 cut(s)	111, 456, 783, 1120, 1930
Tru1I	TTAA	8 cut(s)	611, 822, 1050, 1455, 1635, 1773, 1914, 1968
Tru9I	TTAA	8 cut(s)	611, 822, 1050, 1455, 1635, 1773, 1914, 1968
TscAI	CASTG	4 cut(s)	930, 999, 1261, 1522
TseFI	GTSAC	7 cut(s)	552, 572, 630, 796, 921, 1376, 1558
TseI	GCWGC	7 cut(s)	315, 473, 745, 1199, 1307, 1682, 1942
Tsp45I	GTSAC	7 cut(s)	552, 572, 630, 796, 921, 1376, 1558
TspGWI	ACGGA	2 cut(s)	868, 1395
TspRI	CASTG	4 cut(s)	930, 999, 1261, 1522
Van91I	CCANNNNNTGG	1 cut(s)	1469
VneI	GTGCAC	2 cut(s)	720, 1392
VpaK11BI	GGWCC	2 cut(s)	251, 939
VspI	ATTAAT	1 cut(s)	822
XagI	CCTNNNNNAGG	2 cut(s)	1658, 2048
XapI	RAATTY	2 cut(s)	42, 662
XceI	RCATGY	3 cut(s)	59, 332, 1244
XspI	CTAG	4 cut(s)	177, 1116, 1409, 1430
ZrmI	AGTACT	1 cut(s)	1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.