Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0002582

Physical Location & Seq

Genomic Coordinates Forward (+)

72234272 .. 72237157

Gene Structure 2886 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG426100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGTATCATCACAAGAACAAGTGTATAAGGACGAATCGGAAAATTCAAGTTGGGCATGTAGCGGAGGAAAAATCACTTCAGGTTGTGCATGAGTACTCTGTGGAAGAGATTAGAATCGTAGAAGATGACAAAGGCAATGAATGGGATCCCTATAGTTGGGAGGATCAGGCACCAATCTCTAGCGGCACAGAGAAGCTAAGAGAAACTGAGGTTGAGGTTGAAGTTGACATGAAGAAAGATGCTGATGTGGAAGGACCGAGTTCAGTTTCTGCTGTTGAAGAGAGTGAACAAGAGAACTTTCTGCGTTCGCCGATTTGCTGCGTTATGGGGCATGTTGATGCTGGTAAAACTAAGTTGCTGGATTGCATCCGCGGCACGAATGTTCAGAAAGGTGAGGCTGGTGGTATTACTCAGCAGATTGGTGCAACTTATCTTCCTGCTGAGAACATACAAGAGAGAATCAAGGAGCTGAAAGCTGCTGATGATAAGCACATGAAGGTACCGGGTCTGTTGCTTATTGATACCCCAGGGCATGAGCCATTCACTAAGTTACGGTCACGGGGTTCCGGTTTGTGTGACATTGCTGTTTTGGTTGTTGACATTATGGATGGCTTAAAGCCTCAGACTATAGAGTCACTCAATCTTTTGAAGTCAAGGAATACTGAATTCATTGTTGCATTGAATAAGGTGGACAGACTCAACGGGTGGAAGCCTTGTCCAAATGCACCAATTATCAAGGCAATGAAGCAGCAATCTCAGGATGTGAAAAATGAGTTCAATATGAGAGTCGTGCAGATTGTCACTCAGTTCAAGGAGCAGGGGATTAATACTAAATTGAACGTCAATGAGAACAAACGGATGAGGGAAACATACAGCATTGTACCTATAAGTGCCAAGAGTGGTGAAGACATCCCAGATTTGTTGTCACTGATGGTTTATTGGACCCAGAAATCTATGACAGAGAAACTGACTTACAGCAATGAAGTGCAGTGTACAGTGTTGGAGGTCAAGTATGTTGAAGGCCTTGGGACAACAATTGATGTTATATTGGTTAATGGGGTGCTTCGCCGTGGAGATCAAATAGTTGTTTGTGGTAACCATGGTACTCCTATTGTTACTAGGATTCAATCTTTGTTGACCCCAGAGCCGATGAAAGAGCTTCGTGTGAAGGGAAAGTATCAGCATCATAGTGAAATCAGAGCTACGCAGGCTATCAAGATCACATCACCACAGGGGTTTGAACATGCTATTGCTGGCACTGCTCTCTATGTAGTAGGGCCTGACGATGACTTGGAAGAGGTCAAGGAAGCAGCTATGGAAGACATGATGAAGTCAGTCCTTGTGAACAACAACAAGAATGGTAGTAGTAGTACAGCTGGTGACGGAGGAGTTTGTGCACAAGCATCAACTCTAAGCTCTTTGGAAGCAATGCTAGAGTTTTTGAAGGCCCAAGAAGTTAATATTCCAGTTCGTGGAATTGGCATAGGCCCTATACAGAAAAAGGATGTCAGGAAGGCCAGTGTGATGCTCGAAAAGAAGATCTTGGCATTTGATGTCAAAGTGACACCGGAGGCCCAGAAACTTGCAGATGAATTGGGTGTGAAGATTTTTGTTGGTGATATAATCCATGAGGTGATTAAGGCCTACATGCAAAACCTCAAGGAGGAAAAGGAGAAGGAGTTAGCTGCTGTGGATGAGGAAGCTGTCTTTCCATGTGTGCTCAAGATTTTACCCAACTGTGTTTTCAACAAGAAGGATCCAATCATAGTTGGGGTTAAAGTTCTTCAAGGCATTGTCAAGGTTGGGACTCCACTTTGTATTCCTCAGAGGGACTTTGTGGTTATTGGGCGCATTGAGTCGATTGAGAATAACCATAAACGTGTTGATATGGCCAACAAGGGGAAGGAAGTTTGCATTAAGATTGTTGGGACGAATCCTAATCAGCAGCAGGTGATGTTTGGTAGGCACTTTAACATTGAAGATGAACTTGTCAGCCATATCTCAATTGGTCGATTGATGTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0002181 GO:0002183 GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0019538 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0033290 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0070993 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 ko03013 map00195 map01100 map03013

Pfam Domains

Protein Families

GTP_EFTU GTP_EFTU_D2 IF-2

Protein Analysis

674

Amino Acids

74.91

Weight (kDa)

5.95

Isoelectric Point (pI)

30.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	104 - 315	6.3e-34	Elongation factor Tu GTP binding domain
MMR_HSR1	PF01926	107 - 229	4.3e-06	50S ribosome-binding GTPase
GTP_EFTU_D2	PF03144	343 - 388	2.6e-07	Elongation factor Tu domain 2
IF-2	PF11987	460 - 548	1.7e-15	Translation-initiation factor 2
GTP_EFTU_D4	PF14578	571 - 663	1.3e-17	Elongation factor Tu domain 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002582)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21160 AT1G76720 AT1G76720 AT1G76810 AT2G27700 AT2G27700
fragaria_vesca	FvH4_2g13940 FvH4_2g13940 FvH4_2g13940 FvH4_4g36100 FvH4_4g36312
malus_domestica	MD05G1023200.v1.1 MD09G1087100.v1.1 MD10G1024100.v1.1
prunus_persica	Prupe.2G099300_v2.0.a1 Prupe.8G027900_v2.0.a1
pyrus_communis	pycom05g01470 pycom09g01240 pycom10g01600
rosa_chinensis	RchiOBHm_Chr4g0445721 RchiOBHm_Chr6g0275701
rosa_laevigata	RLG00000005714 RLG00000013337 RLG00000013444
rosa_multiflora	Rmu_co8469881.1_g000001 Rmu_sc0003637.1_g000011 Rmu_sc0003637.1_g000012 Rmu_sc0007122.1_g000003
rosa_roxburghii	Rroxscaffold_7G00193000
rosa_rugosa	Rorug04G0365200 Rorug06G0095700
rosa_samantha	Rh4AG426100 Rh4CG453100 Rh4DG434300 Rh6AG207600 Rh6BG210300 Rh6CG214100 Rh6DG203400
rosa_wichuraiana	Rw4G036490 Rw6G018100

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1939
AasI	GACNNNNNNGTC	1 cut(s)	631
Acc36I	ACCTGC	1 cut(s)	1939
Acc65I	GGTACC	1 cut(s)	499
AccB1I	GGYRCC	2 cut(s)	169, 499
AccB7I	CCANNNNNTGG	1 cut(s)	1472
AccII	CGCG	1 cut(s)	372
AciI	CCGC	4 cut(s)	62, 183, 370, 372
AclWI	GGATC	5 cut(s)	140, 153, 171, 1751, 1764
AcoI	YGGCCR	1 cut(s)	1890
AcsI	RAATTY	2 cut(s)	42, 665
AcuI	CTGAAG	1 cut(s)	62
AfaI	GTAC	6 cut(s)	95, 501, 882, 994, 1105, 1372
AfiI	CCNNNNNNNGG	4 cut(s)	156, 1472, 1663, 1899
AflIII	ACRYGT	1 cut(s)	1879
AjnI	CCWGG	1 cut(s)	526
AjuI	GAANNNNNNNTTGG	2 cut(s)	1727, 1759
Alw21I	GWGCWC	2 cut(s)	1399, 1722
Alw44I	GTGCAC	1 cut(s)	1395
AlwI	GGATC	5 cut(s)	140, 153, 171, 1751, 1764
AlwNI	CAGNNNCTG	1 cut(s)	269
AoxI	GGCC	8 cut(s)	1021, 1277, 1446, 1486, 1515, 1572, 1641, 1890
ApaLI	GTGCAC	1 cut(s)	1395
ApeKI	GCWGC	6 cut(s)	318, 476, 748, 1310, 1685, 1945
ApoI	RAATTY	2 cut(s)	42, 665
AseI	ATTAAT	1 cut(s)	825
Asp718I	GGTACC	1 cut(s)	499
AspLEI	GCGC	1 cut(s)	1851
AspS9I	GGNCC	6 cut(s)	254, 942, 1277, 1447, 1487, 1573
AsuC2I	CCSGG	1 cut(s)	504
AsuHPI	GGTGA	7 cut(s)	404, 914, 1218, 1391, 1628, 1645, 1963
AvaII	GGWCC	2 cut(s)	254, 942
BaeGI	GKGCMC	1 cut(s)	1399
BalI	TGGCCA	1 cut(s)	1892
BamHI	GGATCC	2 cut(s)	145, 1756
BanI	GGYRCC	2 cut(s)	169, 499
BbsI	GAAGAC	2 cut(s)	912, 1326
Bbv12I	GWGCWC	2 cut(s)	1399, 1722
BbvI	GCAGC	6 cut(s)	305, 463, 760, 1322, 1672, 1957
BccI	CCATC	2 cut(s)	602, 925
BceAI	ACGGC	1 cut(s)	1053
BcgI	CGANNNNNNTGC	1 cut(s)	2001
BciT130I	CCWGG	1 cut(s)	528
BcnI	CCSGG	1 cut(s)	504
BfaI	CTAG	3 cut(s)	180, 1119, 1433
BfmI	CTRYAG	2 cut(s)	151, 627
BfuAI	ACCTGC	1 cut(s)	1939
BglII	AGATCT	1 cut(s)	1539
BisI	GCNGC	8 cut(s)	184, 319, 373, 477, 749, 1311, 1686, 1946
BlsI	GCNGC	8 cut(s)	185, 320, 374, 478, 750, 1312, 1687, 1947
BmcAI	AGTACT	1 cut(s)	95
Bme1390I	CCNGG	2 cut(s)	504, 528
Bme18I	GGWCC	2 cut(s)	254, 942
BmgT120I	GGNCC	6 cut(s)	254, 942, 1277, 1447, 1487, 1573
BmiI	GGNNCC	6 cut(s)	147, 171, 501, 565, 944, 1758
BmrFI	CCNGG	2 cut(s)	504, 528
BmsI	GCATC	6 cut(s)	229, 328, 375, 1192, 1412, 1515
BpiI	GAAGAC	2 cut(s)	912, 1326
BpuEI	CTTGAG	2 cut(s)	1643, 1706
BpuMI	CCSGG	1 cut(s)	504
BsaBI	GATNNNNATC	1 cut(s)	113
BsaJI	CCNNGG	6 cut(s)	370, 526, 527, 1024, 1069, 1099
BsaWI	WCCGGW	2 cut(s)	566, 1567
BsaXI	ACNNNNNCTCC	4 cut(s)	995, 1025, 1664, 1694
Bsc4I	CCNNNNNNNGG	4 cut(s)	156, 1472, 1663, 1899
Bse1I	ACTGG	2 cut(s)	1466, 1518
Bse3DI	GCAATG	5 cut(s)	142, 579, 747, 985, 1434
Bse8I	GATNNNNATC	1 cut(s)	113
BseBI	CCWGG	1 cut(s)	528
BseDI	CCNNGG	6 cut(s)	370, 526, 527, 1024, 1069, 1099
BseGI	GGATG	7 cut(s)	366, 613, 766, 864, 909, 1510, 1699
BseJI	GATNNNNATC	1 cut(s)	113
BseLI	CCNNNNNNNGG	4 cut(s)	156, 1472, 1663, 1899
BseMI	GCAATG	5 cut(s)	142, 579, 747, 985, 1434
BseMII	CTCAG	7 cut(s)	198, 425, 432, 635, 770, 818, 1838
BseNI	ACTGG	2 cut(s)	1466, 1518
BseRI	GAGGAG	1 cut(s)	1401
BseSI	GKGCMC	1 cut(s)	1399
BseXI	GCAGC	6 cut(s)	305, 463, 760, 1322, 1672, 1957
BsgI	GTGCAG	2 cut(s)	812, 1007
Bsh1236I	CGCG	1 cut(s)	372
BshFI	GGCC	8 cut(s)	1023, 1279, 1448, 1488, 1517, 1574, 1643, 1892
BshNI	GGYRCC	2 cut(s)	169, 499
BsiHKAI	GWGCWC	2 cut(s)	1399, 1722
BsiSI	CCGG	3 cut(s)	503, 567, 1568
BslFI	GGGAC	4 cut(s)	1042, 1819, 1844, 1942
BslI	CCNNNNNNNGG	4 cut(s)	156, 1472, 1663, 1899
BsmFI	GGGAC	4 cut(s)	1042, 1819, 1844, 1942
BsnI	GGCC	8 cut(s)	1023, 1279, 1448, 1488, 1517, 1574, 1643, 1892
Bsp1286I	GDGCHC	2 cut(s)	1399, 1722
Bsp1407I	TGTACA	1 cut(s)	992
Bsp143I	GATC	6 cut(s)	145, 163, 1075, 1218, 1539, 1756
Bsp19I	CCATGG	1 cut(s)	1099
BspACI	CCGC	4 cut(s)	62, 183, 370, 372
BspANI	GGCC	8 cut(s)	1023, 1279, 1448, 1488, 1517, 1574, 1643, 1892
BspCNI	CTCAG	7 cut(s)	199, 424, 433, 634, 769, 817, 1837
BspFNI	CGCG	1 cut(s)	372
BspLI	GGNNCC	6 cut(s)	147, 171, 501, 565, 944, 1758
BspMI	ACCTGC	1 cut(s)	1939
BspPI	GGATC	5 cut(s)	140, 153, 171, 1751, 1764
BspT107I	GGYRCC	2 cut(s)	169, 499
BsrDI	GCAATG	5 cut(s)	142, 579, 747, 985, 1434
BsrGI	TGTACA	1 cut(s)	992
BsrI	ACTGG	2 cut(s)	1466, 1518
BssECI	CCNNGG	6 cut(s)	370, 526, 527, 1024, 1069, 1099
BssMI	GATC	6 cut(s)	145, 163, 1075, 1218, 1539, 1756
BssT1I	CCWWGG	2 cut(s)	1024, 1099
Bst2UI	CCWGG	1 cut(s)	528
Bst4CI	ACNGT	3 cut(s)	555, 997, 1739
Bst6I	CTCTTC	3 cut(s)	99, 273, 1290
BstAUI	TGTACA	1 cut(s)	992
BstC8I	GCNNGC	2 cut(s)	1209, 1255
BstDSI	CCRYGG	3 cut(s)	370, 1069, 1099
BstEII	GGTNACC	1 cut(s)	1094
BstENI	CCTNNNNNAGG	1 cut(s)	1661
BstF5I	GGATG	7 cut(s)	366, 613, 766, 864, 909, 1510, 1699
BstFNI	CGCG	1 cut(s)	372
BstHHI	GCGC	1 cut(s)	1851
BstKTI	GATC	6 cut(s)	148, 166, 1078, 1221, 1542, 1759
BstMBI	GATC	6 cut(s)	145, 163, 1075, 1218, 1539, 1756
BstMWI	GCNNNNNNNGC	3 cut(s)	372, 1208, 1259
BstNI	CCWGG	1 cut(s)	528
BstNSI	RCATGY	4 cut(s)	59, 335, 1247, 1651
BstPI	GGTNACC	1 cut(s)	1094
BstSCI	CCNGG	2 cut(s)	502, 526
BstSFI	CTRYAG	2 cut(s)	151, 627
BstSLI	GKGCMC	1 cut(s)	1399
BstUI	CGCG	1 cut(s)	372
BstV1I	GCAGC	6 cut(s)	305, 463, 760, 1322, 1672, 1957
BstV2I	GAAGAC	2 cut(s)	912, 1326
BstX2I	RGATCY	3 cut(s)	145, 1539, 1756
BstYI	RGATCY	3 cut(s)	145, 1539, 1756
BsuRI	GGCC	8 cut(s)	1023, 1279, 1448, 1488, 1517, 1574, 1643, 1892
BtgI	CCRYGG	3 cut(s)	370, 1069, 1099
BtsCI	GGATG	7 cut(s)	366, 613, 766, 864, 909, 1510, 1699
BtsI	GCAGTG	2 cut(s)	995, 1257
BtsIMutI	CAGTG	5 cut(s)	926, 995, 1002, 1257, 1525
BveI	ACCTGC	1 cut(s)	1939
Cac8I	GCNNGC	2 cut(s)	1209, 1255
CaiI	CAGNNNCTG	1 cut(s)	269
CfoI	GCGC	1 cut(s)	1851
Cfr13I	GGNCC	6 cut(s)	254, 942, 1277, 1447, 1487, 1573
Cfr42I	CCGCGG	1 cut(s)	373
Csp6I	GTAC	6 cut(s)	94, 500, 881, 993, 1104, 1371
CviQI	GTAC	6 cut(s)	94, 500, 881, 993, 1104, 1371
DpnI	GATC	6 cut(s)	147, 165, 1077, 1220, 1541, 1758
DpnII	GATC	6 cut(s)	145, 163, 1075, 1218, 1539, 1756
DrdI	GACNNNNNNGTC	1 cut(s)	631
DseDI	GACNNNNNNGTC	1 cut(s)	631
EaeI	YGGCCR	1 cut(s)	1890
Eam1104I	CTCTTC	3 cut(s)	99, 273, 1290
EarI	CTCTTC	3 cut(s)	99, 273, 1290
Eco130I	CCWWGG	2 cut(s)	1024, 1099
Eco147I	AGGCCT	2 cut(s)	1023, 1643
Eco47I	GGWCC	2 cut(s)	254, 942
Eco57I	CTGAAG	1 cut(s)	62
Eco91I	GGTNACC	1 cut(s)	1094
EcoNI	CCTNNNNNAGG	1 cut(s)	1661
EcoO109I	RGGNCCY	2 cut(s)	1277, 1487
EcoO65I	GGTNACC	1 cut(s)	1094
EcoRI	GAATTC	1 cut(s)	665
EcoRII	CCWGG	1 cut(s)	526
EcoT14I	CCWWGG	2 cut(s)	1024, 1099
ErhI	CCWWGG	2 cut(s)	1024, 1099
FalI	AAGNNNNNCTT	4 cut(s)	1526, 1558, 1971, 2003
FaqI	GGGAC	4 cut(s)	1042, 1819, 1844, 1942
Fnu4HI	GCNGC	8 cut(s)	184, 319, 373, 477, 749, 1311, 1686, 1946
FokI	GGATG	7 cut(s)	353, 620, 773, 871, 896, 1517, 1706
Fsp4HI	GCNGC	8 cut(s)	184, 319, 373, 477, 749, 1311, 1686, 1946
FspBI	CTAG	3 cut(s)	180, 1119, 1433
GlaI	GCGC	1 cut(s)	1850
GluI	GCNGC	8 cut(s)	184, 319, 373, 477, 749, 1311, 1686, 1946
HaeIII	GGCC	8 cut(s)	1023, 1279, 1448, 1488, 1517, 1574, 1643, 1892
HapII	CCGG	3 cut(s)	503, 567, 1568
HhaI	GCGC	1 cut(s)	1851
Hin6I	GCGC	1 cut(s)	1849
HinP1I	GCGC	1 cut(s)	1849
HincII	GTYRAC	3 cut(s)	226, 598, 1137
HindII	GTYRAC	3 cut(s)	226, 598, 1137
HpaII	CCGG	3 cut(s)	503, 567, 1568
HphI	GGTGA	7 cut(s)	404, 914, 1218, 1391, 1628, 1645, 1963
Hpy166II	GTNNAC	8 cut(s)	226, 287, 598, 691, 993, 1137, 1345, 1397
Hpy188I	TCNGA	5 cut(s)	39, 387, 624, 1199, 1827
Hpy188III	TCNNGA	4 cut(s)	758, 1216, 1510, 1723
Hpy8I	GTNNAC	8 cut(s)	226, 287, 598, 691, 993, 1137, 1345, 1397
HpyAV	CCTTC	9 cut(s)	245, 490, 1013, 1162, 1438, 1507, 1669, 1747, 1897
HpyCH4III	ACNGT	3 cut(s)	555, 997, 1739
HpyCH4IV	ACGT	2 cut(s)	840, 1879
HpyF10VI	GCNNNNNNNGC	3 cut(s)	372, 1208, 1259
HpySE526I	ACGT	2 cut(s)	840, 1879
HspAI	GCGC	1 cut(s)	1849
KpnI	GGTACC	1 cut(s)	503
KspI	CCGCGG	1 cut(s)	373
Kzo9I	GATC	6 cut(s)	145, 163, 1075, 1218, 1539, 1756
LmnI	GCTCC	2 cut(s)	466, 814
Lsp1109I	GCAGC	6 cut(s)	305, 463, 760, 1322, 1672, 1957
LweI	GCATC	6 cut(s)	229, 328, 375, 1192, 1412, 1515
MaeI	CTAG	3 cut(s)	180, 1119, 1433
MaeII	ACGT	2 cut(s)	840, 1879
MalI	GATC	6 cut(s)	147, 165, 1077, 1220, 1541, 1758
MboI	GATC	6 cut(s)	145, 163, 1075, 1218, 1539, 1756
MfeI	CAATTG	2 cut(s)	1035, 2004
MflI	RGATCY	3 cut(s)	145, 1539, 1756
MhlI	GDGCHC	2 cut(s)	1399, 1722
MlsI	TGGCCA	1 cut(s)	1892
MluCI	AATT	8 cut(s)	42, 665, 729, 833, 1035, 1476, 1592, 2004
MluNI	TGGCCA	1 cut(s)	1892
MlyI	GAGTC	5 cut(s)	641, 690, 795, 1801, 1865
MmeI	TCCRAC	1 cut(s)	981
Mox20I	TGGCCA	1 cut(s)	1892
MscI	TGGCCA	1 cut(s)	1892
MseI	TTAA	8 cut(s)	614, 825, 1053, 1458, 1638, 1776, 1917, 1971
MslI	CAYNNNNRTG	3 cut(s)	336, 1188, 1878
Msp20I	TGGCCA	1 cut(s)	1892
MspA1I	CMGCKG	2 cut(s)	372, 1376
MspI	CCGG	3 cut(s)	503, 567, 1568
MspR9I	CCNGG	2 cut(s)	504, 528
MunI	CAATTG	2 cut(s)	1035, 2004
MvaI	CCWGG	1 cut(s)	528
MvnI	CGCG	1 cut(s)	372
MwoI	GCNNNNNNNGC	3 cut(s)	372, 1208, 1259
NciI	CCSGG	1 cut(s)	504
NcoI	CCATGG	1 cut(s)	1099
NdeII	GATC	6 cut(s)	145, 163, 1075, 1218, 1539, 1756
NlaIV	GGNNCC	6 cut(s)	147, 171, 501, 565, 944, 1758
NmuCI	GTSAC	7 cut(s)	555, 575, 633, 799, 924, 1379, 1561
NspI	RCATGY	4 cut(s)	59, 335, 1247, 1651
PaqCI	CACCTGC	1 cut(s)	1939
PasI	CCCWGGG	1 cut(s)	527
PceI	AGGCCT	2 cut(s)	1023, 1643
PfeI	GAWTC	5 cut(s)	34, 114, 459, 1123, 1933
PflMI	CCANNNNNTGG	1 cut(s)	1472
PkrI	GCNGC	8 cut(s)	185, 320, 374, 478, 750, 1312, 1687, 1947
PleI	GAGTC	5 cut(s)	640, 690, 794, 1801, 1864
PpsI	GAGTC	5 cut(s)	640, 690, 794, 1801, 1864
PshBI	ATTAAT	1 cut(s)	825
Psp6I	CCWGG	1 cut(s)	526
PspEI	GGTNACC	1 cut(s)	1094
PspGI	CCWGG	1 cut(s)	526
PspN4I	GGNNCC	6 cut(s)	147, 171, 501, 565, 944, 1758
PspPI	GGNCC	6 cut(s)	254, 942, 1277, 1447, 1487, 1573
PstNI	CAGNNNCTG	1 cut(s)	269
PsuI	RGATCY	3 cut(s)	145, 1539, 1756
PvuII	CAGCTG	1 cut(s)	1376
RsaI	GTAC	6 cut(s)	95, 501, 882, 994, 1105, 1372
RsaNI	GTAC	6 cut(s)	94, 500, 881, 993, 1104, 1371
RseI	CAYNNNNRTG	3 cut(s)	336, 1188, 1878
SacII	CCGCGG	1 cut(s)	373
SaqAI	TTAA	8 cut(s)	614, 825, 1053, 1458, 1638, 1776, 1917, 1971
SatI	GCNGC	8 cut(s)	184, 319, 373, 477, 749, 1311, 1686, 1946
Sau3AI	GATC	6 cut(s)	145, 163, 1075, 1218, 1539, 1756
Sau96I	GGNCC	6 cut(s)	254, 942, 1277, 1447, 1487, 1573
ScaI	AGTACT	1 cut(s)	95
SchI	GAGTC	5 cut(s)	641, 690, 795, 1801, 1865
ScrFI	CCNGG	2 cut(s)	504, 528
SduI	GDGCHC	2 cut(s)	1399, 1722
SfaNI	GCATC	6 cut(s)	229, 328, 375, 1192, 1412, 1515
SfcI	CTRYAG	2 cut(s)	151, 627
Sfr303I	CCGCGG	1 cut(s)	373
SgrBI	CCGCGG	1 cut(s)	373
SinI	GGWCC	2 cut(s)	254, 942
SmiMI	CAYNNNNRTG	3 cut(s)	336, 1188, 1878
SmlI	CTYRAG	2 cut(s)	1658, 1721
SmoI	CTYRAG	2 cut(s)	1658, 1721
Sse9I	AATT	8 cut(s)	42, 665, 729, 833, 1035, 1476, 1592, 2004
SseBI	AGGCCT	2 cut(s)	1023, 1643
SsiI	CCGC	4 cut(s)	62, 183, 370, 372
SspI	AATATT	1 cut(s)	1462
SspMI	CTAG	3 cut(s)	180, 1119, 1433
StuI	AGGCCT	2 cut(s)	1023, 1643
StyD4I	CCNGG	2 cut(s)	502, 526
StyI	CCWWGG	2 cut(s)	1024, 1099
TaaI	ACNGT	3 cut(s)	555, 997, 1739
TaiI	ACGT	2 cut(s)	843, 1882
TaqI	TCGA	3 cut(s)	1530, 1859, 2011
TaqII	GACCGA	1 cut(s)	271
TasI	AATT	8 cut(s)	42, 665, 729, 833, 1035, 1476, 1592, 2004
TatI	WGTACW	3 cut(s)	93, 992, 1370
TauI	GCSGC	2 cut(s)	186, 375
TfiI	GAWTC	5 cut(s)	34, 114, 459, 1123, 1933
Tru1I	TTAA	8 cut(s)	614, 825, 1053, 1458, 1638, 1776, 1917, 1971
Tru9I	TTAA	8 cut(s)	614, 825, 1053, 1458, 1638, 1776, 1917, 1971
TscAI	CASTG	5 cut(s)	933, 995, 1002, 1264, 1525
TseFI	GTSAC	7 cut(s)	555, 575, 633, 799, 924, 1379, 1561
TseI	GCWGC	6 cut(s)	318, 476, 748, 1310, 1685, 1945
Tsp45I	GTSAC	7 cut(s)	555, 575, 633, 799, 924, 1379, 1561
TspGWI	ACGGA	2 cut(s)	871, 1398
TspRI	CASTG	5 cut(s)	933, 995, 1002, 1264, 1525
Van91I	CCANNNNNTGG	1 cut(s)	1472
VneI	GTGCAC	1 cut(s)	1395
VpaK11BI	GGWCC	2 cut(s)	254, 942
VspI	ATTAAT	1 cut(s)	825
XagI	CCTNNNNNAGG	1 cut(s)	1661
XapI	RAATTY	2 cut(s)	42, 665
XceI	RCATGY	4 cut(s)	59, 335, 1247, 1651
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2003
XspI	CTAG	3 cut(s)	180, 1119, 1433
ZrmI	AGTACT	1 cut(s)	95

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.