Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002582

Physical Location & Seq

Genomic Coordinates Reverse (-)

1091358 .. 1093856

Gene Structure 2499 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005714

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGGAAAGCAAGAAGGCAGACGAGAAGAAAGAAAAGAAGACGATGGAGGCGAAAAAGAAAGTGCCAAAGCATGTGAGGGCAATGCAGGAGGCACTGGCGAAGCGAAAGGAAGAGGAAGAGAGGCAGAGAAGGGAGGAAGAGGAGAGACTGAGGAGAGAAGAAGAGGAGAGGCTGAGGAGAGAACAGGTTGAGAGGGAAGCAGAGGAGGCCAGGATTAGGAGAAAGGAAAAGAAAAAGGAGATCATAGAGCACAAGAGAAGGGAAGGCATTCCTGTAACTGCCAAGCAGAAACAAGAAGCAGACAAGTTAAAGAGGTATCGAAAACAGATAGGGGTTCCACCTCCTGTTCCTGCCGCTGAGGAGGAGAATGATCACAAAGGGCCTTCCAAAAGACCCATGTATCATCACAAGAACAAGTGTATGAGGACAAATCGGAAAATTCAAGTTGGGCATGTAGCGGAGGAAAAATCACTTCAAGTTGTGCATGAGTCTGTGGAAGAGATTAGAATCGTAGAAGATGACAAAGGCAATGAATGGGATCCCTATAGTTGGGAGGATCAGGCACCAATCTCTAGCGGCACAGAGAAGCTAAGAGAAACTGAGGTTGAGGTTGAAGTTGACACGAAGAAAGATGCTGATGTGGAAGGACCGAGTTCAGTTTCTGCTGTTGAAGAGAGTGAAGAAGAGAACCTTCTGCGTTCGCCGATTTGCTGCGTTATGGGGCATGTTGATGCTGGTAAAACCAAGTTGCTGGATTGCATCCGCGGCACCAATGTTCAGAAAGGTGAGGCTGGTGGTATTACTCAGCAGATTGGTGCAACTTATCTTCCTGCTGAGAACATACAAGAGAAAATCAAGGAGCTGAAAGCTGCTGATGATAAGCACATGAAGGTACCGGGTCTGTTGCTTATTGATACCCCAGGGCATGAGCCATTCACTAAGTTACGGTCACGGGGTTCTGGTTTGTGTGACATTGCTGTTTTGGTTGTTGACATTATGGATGGCTTAAAGCCTCAGACTATAGAGTCACTCAATCTTTTGAAGTCAAGGAATACAGAATTCATTGTTGCATTGAATAAGGTGGACAGACTCAACGGGTGGAAGCCTTGTCCAAATGCACCAATTATCAAGGCAATGAAGCAGCAATCTCAGGATGTGAAAAATGAGTTCAATATGAGAGTCGTGCAGATTGTCACTCAGTTCAAGGAGCAGGGGATTAATACTAAATTGAACGTCGATGAGAACAAACGGATGAGGGAAACATACAGCATTGTACCTATAAGTGCCAAGAGTGGTGAAGGCATCCCAGATTTGTTGTCACTGATGGTTTATTGGAGCCAGAAATCTATGACAGAGAAACTGACTTACAGCAATGAAGTGCAGTGTACAGTGTTGGAGGTCAAGTATGTTGAAGGCCTTGGGACAACAATTGATGTTATATTGGTTAATGGGGTGCTTCGCCGTGGAGATCAAATAGTTGTTTGTGGTAACCATGGTACTCCTATTGTTACTAGGATTCAATCTTTGTTGACCCCAGAGCCAATGAAAGAGCTTCGTGTGAAGGGAAAGTATCAGCATCATAGTGAAATCAGAGCTGCGCAGGCTATCAAGATCACATCACCACAGGGGTTTGAACATGCTATTGCTGGCACTGCTGTCTATGTAGTAGGGCCTGACGATGACTTGGAAGAGGTCAAGGAAGCAGCTATGGAAGACATGATGAAGTCAGTCCTTGTGAACAATAACAAGAATGGTAGTAGTAGTGCTGCTGGTGACGGAGGAGTTTGTGCACAAGCATCAACTCTAGGCTCTTTGGAAGCAATGCTAGAGTTTCTGAAGGCCCAAGAAGTTAATATTCCAGTTCGTGGAATTGGAATAGGCCCTATACAGAAAAAGGATGTCAGGAAGGCCAGTGTGATGCTCCAAAAGAAGATCTTGGCATTTGATGTCAAAGTGACACCGGAGGCCCAGAAACTTGCAGATGAATTGGGTGTGAAGATTTTTGTTGGTGATATAATCCATGAGGTGATTAAGGCCTATATGAAAAACCTCAAGGAGGAAAAGGAGAAGGAGTTAGCTGCTGTGGATGAGGAAGCTGTCTTTCCATGTGTGCTCAAGATTTTACCCAACTGTGTTTTCAACAAGAAGGATCCAATTATAGTTGGGGTTAAAGTTCTTCAAGGCATCGTCAAGGTTGGGACTCCACTTTGTATTCCTCAGAGGGACTTTGTGGTTATTGGGCGCATTGAGTCGATTGAGAATAACCATAAACGTGTTGATATGGCCAACAAGGGGAAGGAAGTTTGCATTAAGATAGTTGGGACGAATCCTAATCAGCAGCAGGTGATGTTTGGTAGGCACTTTAACATTGAAGATGAACTTGTCAGCCATATCTCAAGGAGGTCGATTGATGTGCTAAAATCATGCTACCGGAACGACCTGTCGCAGGAGGAGTGGAAGCTGGTTTTGAAATTGAAGACTATTTTCAAGATACTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0002181 GO:0002183 GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0019538 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0033290 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0070993 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 ko03013 map00195 map01100 map03013

Pfam Domains

Protein Families

GTP_EFTU GTP_EFTU_D2 IF-2

Protein Analysis

833

Amino Acids

93.83

Weight (kDa)

8.28

Isoelectric Point (pI)

43.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	235 - 444	3.2e-34	Elongation factor Tu GTP binding domain
MMR_HSR1	PF01926	238 - 360	5.8e-06	50S ribosome-binding GTPase
GTP_EFTU_D2	PF03144	474 - 519	2.8e-07	Elongation factor Tu domain 2
IF-2	PF11987	591 - 679	1e-16	Translation-initiation factor 2
GTP_EFTU_D4	PF14578	702 - 794	1.7e-17	Elongation factor Tu domain 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002582)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21160 AT1G76720 AT1G76720 AT1G76810 AT2G27700 AT2G27700
fragaria_vesca	FvH4_2g13940 FvH4_2g13940 FvH4_2g13940 FvH4_4g36100 FvH4_4g36312
malus_domestica	MD05G1023200.v1.1 MD09G1087100.v1.1 MD10G1024100.v1.1
prunus_persica	Prupe.2G099300_v2.0.a1 Prupe.8G027900_v2.0.a1
pyrus_communis	pycom05g01470 pycom09g01240 pycom10g01600
rosa_chinensis	RchiOBHm_Chr4g0445721 RchiOBHm_Chr6g0275701
rosa_laevigata	RLG00000005714 RLG00000013337 RLG00000013444
rosa_multiflora	Rmu_co8469881.1_g000001 Rmu_sc0003637.1_g000011 Rmu_sc0003637.1_g000012 Rmu_sc0007122.1_g000003
rosa_roxburghii	Rroxscaffold_7G00193000
rosa_rugosa	Rorug04G0365200 Rorug06G0095700
rosa_samantha	Rh4AG426100 Rh4CG453100 Rh4DG434300 Rh6AG207600 Rh6BG210300 Rh6CG214100 Rh6DG203400
rosa_wichuraiana	Rw4G036490 Rw6G018100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2332
AasI	GACNNNNNNGTC	1 cut(s)	1024
Acc16I	TGCGCA	1 cut(s)	1599
Acc36I	ACCTGC	1 cut(s)	2332
Acc65I	GGTACC	1 cut(s)	892
AccB1I	GGYRCC	3 cut(s)	562, 767, 892
AccB7I	CCANNNNNTGG	1 cut(s)	1865
AccII	CGCG	1 cut(s)	765
AciI	CCGC	5 cut(s)	354, 458, 576, 763, 765
AclWI	GGATC	5 cut(s)	533, 546, 564, 2144, 2157
AcoI	YGGCCR	1 cut(s)	2283
AcsI	RAATTY	2 cut(s)	438, 1058
AcuI	CTGAAG	1 cut(s)	1856
AfaI	GTAC	4 cut(s)	894, 1275, 1387, 1498
AfiI	CCNNNNNNNGG	6 cut(s)	216, 549, 1865, 2056, 2292, 2446
AflIII	ACRYGT	1 cut(s)	2272
AjnI	CCWGG	2 cut(s)	209, 919
AjuI	GAANNNNNNNTTGG	2 cut(s)	2120, 2152
AluBI	AGCT	9 cut(s)	589, 862, 869, 1552, 1595, 1706, 2078, 2096, 2461
AluI	AGCT	9 cut(s)	589, 862, 869, 1552, 1595, 1706, 2078, 2096, 2461
Alw21I	GWGCWC	3 cut(s)	252, 1792, 2115
Alw26I	GTCTC	1 cut(s)	139
Alw44I	GTGCAC	1 cut(s)	1788
AlwI	GGATC	5 cut(s)	533, 546, 564, 2144, 2157
AlwNI	CAGNNNCTG	1 cut(s)	662
ApaLI	GTGCAC	1 cut(s)	1788
ApeKI	GCWGC	8 cut(s)	711, 869, 1141, 1595, 1703, 1766, 2078, 2338
ApoI	RAATTY	2 cut(s)	438, 1058
AseI	ATTAAT	1 cut(s)	1218
Asp700I	GAANNNNTTC	1 cut(s)	267
Asp718I	GGTACC	1 cut(s)	892
AspLEI	GCGC	2 cut(s)	1600, 2244
AspS9I	GGNCC	6 cut(s)	380, 647, 1670, 1840, 1880, 1966
AsuC2I	CCSGG	1 cut(s)	897
AsuHPI	GGTGA	7 cut(s)	797, 1307, 1611, 1784, 2021, 2038, 2356
AvaII	GGWCC	1 cut(s)	647
BaeGI	GKGCMC	1 cut(s)	1792
BaeI	ACNNNNGTAYC	2 cut(s)	383, 416
BalI	TGGCCA	1 cut(s)	2285
BamHI	GGATCC	2 cut(s)	538, 2149
BanI	GGYRCC	3 cut(s)	562, 767, 892
BbsI	GAAGAC	3 cut(s)	44, 1719, 2483
Bbv12I	GWGCWC	3 cut(s)	252, 1792, 2115
BbvCI	CCTCAGC	2 cut(s)	173, 357
BbvI	GCAGC	8 cut(s)	698, 856, 1153, 1582, 1715, 1753, 2065, 2350
BccI	CCATC	3 cut(s)	37, 995, 1318
BceAI	ACGGC	1 cut(s)	1446
BcgI	CGANNNNNNTGC	2 cut(s)	2395, 2429
BciT130I	CCWGG	2 cut(s)	211, 921
BclI	TGATCA	1 cut(s)	370
BcnI	CCSGG	1 cut(s)	897
BcoDI	GTCTC	1 cut(s)	139
BfaI	CTAG	4 cut(s)	573, 1512, 1805, 1826
BfmI	CTRYAG	2 cut(s)	544, 1020
BfuAI	ACCTGC	1 cut(s)	2332
BglII	AGATCT	1 cut(s)	1932
Bme1390I	CCNGG	3 cut(s)	211, 897, 921
Bme18I	GGWCC	1 cut(s)	647
BmgT120I	GGNCC	6 cut(s)	380, 647, 1670, 1840, 1880, 1966
BmiI	GGNNCC	7 cut(s)	336, 540, 564, 769, 894, 1337, 2151
BmrFI	CCNGG	3 cut(s)	211, 897, 921
BmsI	GCATC	8 cut(s)	622, 721, 768, 1311, 1585, 1805, 1908, 2193
BpiI	GAAGAC	3 cut(s)	44, 1719, 2483
Bpu10I	CCTNAGC	2 cut(s)	173, 357
BpuEI	CTTGAG	3 cut(s)	2036, 2099, 2380
BpuMI	CCSGG	1 cut(s)	897
BsaBI	GATNNNNATC	1 cut(s)	506
BsaJI	CCNNGG	6 cut(s)	763, 919, 920, 1417, 1462, 1492
BsaWI	WCCGGW	2 cut(s)	1960, 2430
BsaXI	ACNNNNNCTCC	4 cut(s)	1388, 1418, 2057, 2087
Bsc4I	CCNNNNNNNGG	6 cut(s)	216, 549, 1865, 2056, 2292, 2446
Bse1I	ACTGG	3 cut(s)	99, 1859, 1911
Bse3DI	GCAATG	6 cut(s)	87, 535, 972, 1140, 1378, 1827
Bse8I	GATNNNNATC	1 cut(s)	506
BseBI	CCWGG	2 cut(s)	211, 921
BseDI	CCNNGG	6 cut(s)	763, 919, 920, 1417, 1462, 1492
BseGI	GGATG	7 cut(s)	759, 1006, 1159, 1257, 1302, 1903, 2092
BseJI	GATNNNNATC	1 cut(s)	506
BseLI	CCNNNNNNNGG	6 cut(s)	216, 549, 1865, 2056, 2292, 2446
BseMI	GCAATG	6 cut(s)	87, 535, 972, 1140, 1378, 1827
BseNI	ACTGG	3 cut(s)	99, 1859, 1911
BseRI	GAGGAG	9 cut(s)	155, 166, 179, 190, 218, 374, 377, 1794, 2465
BseSI	GKGCMC	1 cut(s)	1792
BseXI	GCAGC	8 cut(s)	698, 856, 1153, 1582, 1715, 1753, 2065, 2350
BsgI	GTGCAG	2 cut(s)	1205, 1400
Bsh1236I	CGCG	1 cut(s)	765
BshNI	GGYRCC	3 cut(s)	562, 767, 892
BsiHKAI	GWGCWC	3 cut(s)	252, 1792, 2115
BsiSI	CCGG	3 cut(s)	896, 1961, 2431
BslFI	GGGAC	4 cut(s)	1435, 2212, 2237, 2335
BslI	CCNNNNNNNGG	6 cut(s)	216, 549, 1865, 2056, 2292, 2446
BsmAI	GTCTC	1 cut(s)	139
BsmFI	GGGAC	4 cut(s)	1435, 2212, 2237, 2335
BsmI	GAATGC	1 cut(s)	267
Bsp1286I	GDGCHC	3 cut(s)	252, 1792, 2115
Bsp1407I	TGTACA	1 cut(s)	1385
Bsp143I	GATC	8 cut(s)	240, 370, 538, 556, 1468, 1611, 1932, 2149
Bsp19I	CCATGG	1 cut(s)	1492
BspACI	CCGC	5 cut(s)	354, 458, 576, 763, 765
BspFNI	CGCG	1 cut(s)	765
BspLI	GGNNCC	7 cut(s)	336, 540, 564, 769, 894, 1337, 2151
BspMI	ACCTGC	1 cut(s)	2332
BspPI	GGATC	5 cut(s)	533, 546, 564, 2144, 2157
BspT107I	GGYRCC	3 cut(s)	562, 767, 892
BsrDI	GCAATG	6 cut(s)	87, 535, 972, 1140, 1378, 1827
BsrGI	TGTACA	1 cut(s)	1385
BsrI	ACTGG	3 cut(s)	99, 1859, 1911
BssECI	CCNNGG	6 cut(s)	763, 919, 920, 1417, 1462, 1492
BssMI	GATC	8 cut(s)	240, 370, 538, 556, 1468, 1611, 1932, 2149
BssT1I	CCWWGG	2 cut(s)	1417, 1492
Bst2UI	CCWGG	2 cut(s)	211, 921
Bst4CI	ACNGT	4 cut(s)	948, 1390, 2132, 2496
Bst6I	CTCTTC	8 cut(s)	105, 111, 132, 156, 492, 666, 678, 1683
BstAUI	TGTACA	1 cut(s)	1385
BstC8I	GCNNGC	2 cut(s)	1602, 1648
BstDSI	CCRYGG	3 cut(s)	763, 1462, 1492
BstEII	GGTNACC	1 cut(s)	1487
BstENI	CCTNNNNNAGG	2 cut(s)	2054, 2444
BstF5I	GGATG	7 cut(s)	759, 1006, 1159, 1257, 1302, 1903, 2092
BstFNI	CGCG	1 cut(s)	765
BstHHI	GCGC	2 cut(s)	1600, 2244
BstKTI	GATC	8 cut(s)	243, 373, 541, 559, 1471, 1614, 1935, 2152
BstMAI	GTCTC	1 cut(s)	139
BstMBI	GATC	8 cut(s)	240, 370, 538, 556, 1468, 1611, 1932, 2149
BstMWI	GCNNNNNNNGC	4 cut(s)	206, 765, 1601, 1652
BstNI	CCWGG	2 cut(s)	211, 921
BstNSI	RCATGY	4 cut(s)	74, 455, 728, 1640
BstPI	GGTNACC	1 cut(s)	1487
BstSCI	CCNGG	3 cut(s)	209, 895, 919
BstSFI	CTRYAG	2 cut(s)	544, 1020
BstSLI	GKGCMC	1 cut(s)	1792
BstUI	CGCG	1 cut(s)	765
BstV1I	GCAGC	8 cut(s)	698, 856, 1153, 1582, 1715, 1753, 2065, 2350
BstV2I	GAAGAC	3 cut(s)	44, 1719, 2483
BstX2I	RGATCY	3 cut(s)	538, 1932, 2149
BstXI	CCANNNNNNTGG	1 cut(s)	751
BstYI	RGATCY	3 cut(s)	538, 1932, 2149
BtgI	CCRYGG	3 cut(s)	763, 1462, 1492
BtsCI	GGATG	7 cut(s)	759, 1006, 1159, 1257, 1302, 1903, 2092
BtsI	GCAGTG	2 cut(s)	1388, 1650
BtsIMutI	CAGTG	6 cut(s)	92, 1319, 1388, 1395, 1650, 1918
BveI	ACCTGC	1 cut(s)	2332
Cac8I	GCNNGC	2 cut(s)	1602, 1648
CaiI	CAGNNNCTG	1 cut(s)	662
CfoI	GCGC	2 cut(s)	1600, 2244
Cfr13I	GGNCC	6 cut(s)	380, 647, 1670, 1840, 1880, 1966
Cfr42I	CCGCGG	1 cut(s)	766
Csp6I	GTAC	4 cut(s)	893, 1274, 1386, 1497
CviQI	GTAC	4 cut(s)	893, 1274, 1386, 1497
DpnI	GATC	8 cut(s)	242, 372, 540, 558, 1470, 1613, 1934, 2151
DpnII	GATC	8 cut(s)	240, 370, 538, 556, 1468, 1611, 1932, 2149
DrdI	GACNNNNNNGTC	1 cut(s)	1024
DseDI	GACNNNNNNGTC	1 cut(s)	1024
EaeI	YGGCCR	1 cut(s)	2283
Eam1104I	CTCTTC	8 cut(s)	105, 111, 132, 156, 492, 666, 678, 1683
EarI	CTCTTC	8 cut(s)	105, 111, 132, 156, 492, 666, 678, 1683
Eco130I	CCWWGG	2 cut(s)	1417, 1492
Eco147I	AGGCCT	2 cut(s)	1416, 2036
Eco47I	GGWCC	1 cut(s)	647
Eco57I	CTGAAG	1 cut(s)	1856
Eco91I	GGTNACC	1 cut(s)	1487
EcoNI	CCTNNNNNAGG	2 cut(s)	2054, 2444
EcoO109I	RGGNCCY	3 cut(s)	380, 1670, 1880
EcoO65I	GGTNACC	1 cut(s)	1487
EcoRI	GAATTC	1 cut(s)	1058
EcoRII	CCWGG	2 cut(s)	209, 919
EcoT14I	CCWWGG	2 cut(s)	1417, 1492
ErhI	CCWWGG	2 cut(s)	1417, 1492
FalI	AAGNNNNNCTT	6 cut(s)	675, 707, 1919, 1951, 2364, 2396
FaqI	GGGAC	4 cut(s)	1435, 2212, 2237, 2335
FbaI	TGATCA	1 cut(s)	370
FokI	GGATG	7 cut(s)	746, 1013, 1166, 1264, 1289, 1910, 2099
FspBI	CTAG	4 cut(s)	573, 1512, 1805, 1826
FspI	TGCGCA	1 cut(s)	1599
GlaI	GCGC	2 cut(s)	1599, 2243
HapII	CCGG	3 cut(s)	896, 1961, 2431
HhaI	GCGC	2 cut(s)	1600, 2244
Hin6I	GCGC	2 cut(s)	1598, 2242
HinP1I	GCGC	2 cut(s)	1598, 2242
HincII	GTYRAC	3 cut(s)	619, 991, 1530
HindII	GTYRAC	3 cut(s)	619, 991, 1530
HinfI	GANTC	9 cut(s)	488, 507, 1025, 1089, 1179, 1516, 2200, 2249, 2326
HpaII	CCGG	3 cut(s)	896, 1961, 2431
HphI	GGTGA	7 cut(s)	797, 1307, 1611, 1784, 2021, 2038, 2356
Hpy166II	GTNNAC	7 cut(s)	619, 991, 1084, 1386, 1530, 1738, 1790
Hpy188I	TCNGA	6 cut(s)	435, 780, 1017, 1592, 1836, 2220
Hpy188III	TCNNGA	5 cut(s)	1151, 1609, 1903, 2116, 2488
Hpy8I	GTNNAC	7 cut(s)	619, 991, 1084, 1386, 1530, 1738, 1790
Hpy99I	CGWCG	1 cut(s)	1238
HpyCH4III	ACNGT	4 cut(s)	948, 1390, 2132, 2496
HpyCH4IV	ACGT	2 cut(s)	1233, 2272
HpyF10VI	GCNNNNNNNGC	4 cut(s)	206, 765, 1601, 1652
HpySE526I	ACGT	2 cut(s)	1233, 2272
HspAI	GCGC	2 cut(s)	1598, 2242
KpnI	GGTACC	1 cut(s)	896
Ksp22I	TGATCA	1 cut(s)	370
KspI	CCGCGG	1 cut(s)	766
Kzo9I	GATC	8 cut(s)	240, 370, 538, 556, 1468, 1611, 1932, 2149
LmnI	GCTCC	4 cut(s)	859, 1207, 1335, 1926
Lsp1109I	GCAGC	8 cut(s)	698, 856, 1153, 1582, 1715, 1753, 2065, 2350
LweI	GCATC	8 cut(s)	622, 721, 768, 1311, 1585, 1805, 1908, 2193
MaeI	CTAG	4 cut(s)	573, 1512, 1805, 1826
MaeII	ACGT	2 cut(s)	1233, 2272
MalI	GATC	8 cut(s)	242, 372, 540, 558, 1470, 1613, 1934, 2151
MboI	GATC	8 cut(s)	240, 370, 538, 556, 1468, 1611, 1932, 2149
MfeI	CAATTG	1 cut(s)	1428
MflI	RGATCY	3 cut(s)	538, 1932, 2149
MhlI	GDGCHC	3 cut(s)	252, 1792, 2115
MlsI	TGGCCA	1 cut(s)	2285
MluCI	AATT	9 cut(s)	438, 1058, 1122, 1226, 1428, 1869, 1985, 2154, 2471
MluNI	TGGCCA	1 cut(s)	2285
MlyI	GAGTC	6 cut(s)	497, 1034, 1083, 1188, 2194, 2258
MmeI	TCCRAC	1 cut(s)	1374
Mox20I	TGGCCA	1 cut(s)	2285
MroXI	GAANNNNTTC	1 cut(s)	267
MscI	TGGCCA	1 cut(s)	2285
MseI	TTAA	9 cut(s)	308, 1007, 1218, 1446, 1851, 2031, 2169, 2310, 2364
MslI	CAYNNNNRTG	3 cut(s)	729, 1581, 2271
Msp20I	TGGCCA	1 cut(s)	2285
MspA1I	CMGCKG	2 cut(s)	356, 765
MspI	CCGG	3 cut(s)	896, 1961, 2431
MspR9I	CCNGG	3 cut(s)	211, 897, 921
MunI	CAATTG	1 cut(s)	1428
Mva1269I	GAATGC	1 cut(s)	267
MvaI	CCWGG	2 cut(s)	211, 921
MvnI	CGCG	1 cut(s)	765
MwoI	GCNNNNNNNGC	4 cut(s)	206, 765, 1601, 1652
NciI	CCSGG	1 cut(s)	897
NcoI	CCATGG	1 cut(s)	1492
NdeII	GATC	8 cut(s)	240, 370, 538, 556, 1468, 1611, 1932, 2149
NlaIV	GGNNCC	7 cut(s)	336, 540, 564, 769, 894, 1337, 2151
NmuCI	GTSAC	7 cut(s)	948, 968, 1026, 1192, 1317, 1772, 1954
NsbI	TGCGCA	1 cut(s)	1599
NspI	RCATGY	4 cut(s)	74, 455, 728, 1640
PaqCI	CACCTGC	1 cut(s)	2332
PasI	CCCWGGG	1 cut(s)	920
PceI	AGGCCT	2 cut(s)	1416, 2036
PcsI	WCGNNNNNNNCGW	1 cut(s)	47
PctI	GAATGC	1 cut(s)	267
PdmI	GAANNNNTTC	1 cut(s)	267
PfeI	GAWTC	3 cut(s)	507, 1516, 2326
PflMI	CCANNNNNTGG	1 cut(s)	1865
PleI	GAGTC	6 cut(s)	496, 1033, 1083, 1187, 2194, 2257
PpsI	GAGTC	6 cut(s)	496, 1033, 1083, 1187, 2194, 2257
PshBI	ATTAAT	1 cut(s)	1218
Psp6I	CCWGG	2 cut(s)	209, 919
PspEI	GGTNACC	1 cut(s)	1487
PspGI	CCWGG	2 cut(s)	209, 919
PspN4I	GGNNCC	7 cut(s)	336, 540, 564, 769, 894, 1337, 2151
PspPI	GGNCC	6 cut(s)	380, 647, 1670, 1840, 1880, 1966
PstNI	CAGNNNCTG	1 cut(s)	662
PsuI	RGATCY	3 cut(s)	538, 1932, 2149
RsaI	GTAC	4 cut(s)	894, 1275, 1387, 1498
RsaNI	GTAC	4 cut(s)	893, 1274, 1386, 1497
RseI	CAYNNNNRTG	3 cut(s)	729, 1581, 2271
SacII	CCGCGG	1 cut(s)	766
SaqAI	TTAA	9 cut(s)	308, 1007, 1218, 1446, 1851, 2031, 2169, 2310, 2364
Sau3AI	GATC	8 cut(s)	240, 370, 538, 556, 1468, 1611, 1932, 2149
Sau96I	GGNCC	6 cut(s)	380, 647, 1670, 1840, 1880, 1966
SchI	GAGTC	6 cut(s)	497, 1034, 1083, 1188, 2194, 2258
ScrFI	CCNGG	3 cut(s)	211, 897, 921
SduI	GDGCHC	3 cut(s)	252, 1792, 2115
SfaNI	GCATC	8 cut(s)	622, 721, 768, 1311, 1585, 1805, 1908, 2193
SfcI	CTRYAG	2 cut(s)	544, 1020
Sfr303I	CCGCGG	1 cut(s)	766
SgrBI	CCGCGG	1 cut(s)	766
SinI	GGWCC	1 cut(s)	647
SmiMI	CAYNNNNRTG	3 cut(s)	729, 1581, 2271
SmlI	CTYRAG	3 cut(s)	2051, 2114, 2395
SmoI	CTYRAG	3 cut(s)	2051, 2114, 2395
Sse9I	AATT	9 cut(s)	438, 1058, 1122, 1226, 1428, 1869, 1985, 2154, 2471
SseBI	AGGCCT	2 cut(s)	1416, 2036
SsiI	CCGC	5 cut(s)	354, 458, 576, 763, 765
SspI	AATATT	1 cut(s)	1855
SspMI	CTAG	4 cut(s)	573, 1512, 1805, 1826
StuI	AGGCCT	2 cut(s)	1416, 2036
StyD4I	CCNGG	3 cut(s)	209, 895, 919
StyI	CCWWGG	2 cut(s)	1417, 1492
TaaI	ACNGT	4 cut(s)	948, 1390, 2132, 2496
TaiI	ACGT	2 cut(s)	1236, 2275
TaqI	TCGA	4 cut(s)	319, 1236, 2252, 2405
TaqII	GACCGA	1 cut(s)	664
TasI	AATT	9 cut(s)	438, 1058, 1122, 1226, 1428, 1869, 1985, 2154, 2471
TatI	WGTACW	1 cut(s)	1385
TauI	GCSGC	3 cut(s)	356, 579, 768
TfiI	GAWTC	3 cut(s)	507, 1516, 2326
Tru1I	TTAA	9 cut(s)	308, 1007, 1218, 1446, 1851, 2031, 2169, 2310, 2364
Tru9I	TTAA	9 cut(s)	308, 1007, 1218, 1446, 1851, 2031, 2169, 2310, 2364
TscAI	CASTG	6 cut(s)	99, 1326, 1388, 1395, 1657, 1918
TseFI	GTSAC	7 cut(s)	948, 968, 1026, 1192, 1317, 1772, 1954
TseI	GCWGC	8 cut(s)	711, 869, 1141, 1595, 1703, 1766, 2078, 2338
Tsp45I	GTSAC	7 cut(s)	948, 968, 1026, 1192, 1317, 1772, 1954
TspGWI	ACGGA	2 cut(s)	1264, 1791
TspRI	CASTG	6 cut(s)	99, 1326, 1388, 1395, 1657, 1918
Van91I	CCANNNNNTGG	1 cut(s)	1865
VneI	GTGCAC	1 cut(s)	1788
VpaK11BI	GGWCC	1 cut(s)	647
VspI	ATTAAT	1 cut(s)	1218
XagI	CCTNNNNNAGG	2 cut(s)	2054, 2444
XapI	RAATTY	2 cut(s)	438, 1058
XceI	RCATGY	4 cut(s)	74, 455, 728, 1640
XmnI	GAANNNNTTC	1 cut(s)	267
XspI	CTAG	4 cut(s)	573, 1512, 1805, 1826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.