Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003688

Physical Location & Seq

Genomic Coordinates Reverse (-)

21640922 .. 21647720

Gene Structure 6799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G252300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGCGCCGAGGACGACTGCCGGTGTAGAAGGCTTGGGGCCCACCACCGTCAATATTGCCGAGAGAGAAAGCAGCGGATGTAGCGATGGTTCAGCCTTCCCTGTTGATGCTGCTGCTGCTGCTGCTGCTGCTAACAAGAATAAACGAGGTGAGAAAGATGATTCGTACACTCGACTATGGCATGCATGTGCAGGTCCTAATGTTTATGTTCCGGGCCCCGGAGAGAAGGTTTTCTACTTCCCTCAAGGTCACATGGAACAGGTCGAGGCATATGCAAACGAAGATGGCAAAATGGAAATGCCAATTTACAATTTGCCTTCCAAGATCCTCTGCAATGTTGTCTGTGTTCTGCTAAAGGCTGAAGTTCACACAGATGAAGTGTTTGCTCAAATCACCTTGCTTCCTCTGACTGAGCAAGAACAGCTAAGTTTAGATGAAGAAAATAATCAACCCGTGCCTCAGAGCACCAGTACACGCTCCTTTAGCAAGACACTCACCCCATCTGACACAAGCACTCATGGTGGATTCTCTGTTCCGAAACGACAAGCTGATGAGTGCCTTCCACCTCTGGACATGTCTCAGCAACCACCAGTACAAGAACTCGTCGCAAGGGACTTGCAGGGATTTGAGTGGCACTTTCGCCATATATTTCGTGGTCAGCCAAAGAGGCACTTGCTTACCAGTGGTTGGAGTACATTTGTGACTGCAAAAAGACTTGTTGCTGGGGATGCATGTATCTTTGTCAGAGGAGAAAATGGAGAGTTGCGTGTTGGGATACGCCGTGCGAACAAAAACCAGGACAATGCATCAACTGCTCTCATTTCAGGCCACAGCATGCAACATGGCATACTTGCCAGTGCTTTCCATGCCAATTCTACTGGTACCCTGTTTACTGTGTACTATCGTCCATGGACCAGTCCTGCTGCATTTATAATTCCTTATGATCGATACATGAAATCAGCAAAAAATGACCATTCTATTGGTATGAGATTCAGAACGTGTTTTGAAGGTGATGAATGTGCAGAGAAAAGATTGGCGGGTACTATAATAGGTATTGAAGATAATGATTGTATCAGGTGGCCCAGTTCAGAATGGAGGTGTCTGAAGGTCCAATGGGATGCCTCATCAGATACAAACTTGCATCCTGAAAGGCTTTCTCCTTGGAATATCATGCCTCTCCAACCTAATAAGAGAGCACATGTTCCTGATCTGATATCACCTGGGTTTCCTAACTTGGCTACGAATGGCTTATTGCCAATTCCAGTTGAGTATACACCTCCAAGACAAAAAAAGGTCTTTCAAGGTCAAGAAATTAGTGACCCACCTGCTCATGAACCGGGTACACAAAAACCACCATTACTACCGCAGTTCATTCCACCATCAAATCCTGACTGGACCCATACAGAATTGGGATTGGACAACAATCCATTGCATGACCCACTTTATCAATGTCCTGGCAGTGCAATAGCTCCAAGTCTCACTAACCGATGGCCACCAATATTTAATTTTGGAGTCTGGGACAGTGTAGCGTTTAGAAGAAGCATGTCAGTTCCAAATATCAAATCCTCTGGGTCCCAGGACTCGAGGGCCTTCAAACCAAGGAGTGAGATTGAAGCGCCACTTGTCCAACCAAATAGCCGTGGTACAACCATGCTGTTTGGAGTCAATATAGTTACTAGTCACCCGGAGCTCCCTTCACCACAAGTTGTCACTTCTAGTGAACTTTTTAGTCCTTGTTCTATTACTCCAATATCTCAGTCGAGTGTTTCTGAAACTGTCCAGATTTCAGAGACCTCTAAGATTGTTTCTGGTGTTCTTTCTGCGAAACAATGCAAGAAATGCTGCTCTGTCACTAACAGGAGCTGCATAAAGGTGCTCAAATATGGAGCTCCTGTTGGAAGGTCGGTGGACCTCGCACGCTTTGATGGGTATGGTGAACTCATTTCTGAGCTTGACCAGATGTTCGATTTCAAAGGAAGCTTGATCGATGGAAGCAGTGGGTGGCAGGTAACCTACATGGATGATGAAGGAGACATGATGCTGATAGGAGATTACCTGTGGCATGAATTCCAGTCCATGGTGCAAAAATTGTTCATCTGTCCAAAGGAAGAAATCGACAGACTGAATCCAGGCTCGCCAAATGCAACATCCCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

719

Amino Acids

79.24

Weight (kDa)

5.81

Isoelectric Point (pI)

56.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003688)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24730 FvH4_2g24730 FvH4_2g24730 FvH4_5g06540
malus_domestica	MD00G1056300.v1.1 MD05G1338500.v1.1 MD11G1297900.v1.1
prunus_persica	Prupe.8G252300_v2.0.a1
pyrus_communis	pycom02g21520 pycom03g21940 pycom03g21950 pycom05g12140 pycom11g26170 pycom16g06400 pycom16g24090
rosa_chinensis	RchiOBHm_Chr6g0292551
rosa_laevigata	RLG00000012010
rosa_multiflora	Rmu_co8118566.1_g000001 Rmu_sc0000515.1_g000001 Rmu_sc0003486.1_g000005 Rmu_sc0004825.1_g000018
rosa_roxburghii	Rroxscaffold_4G00318020 Rroxscaffold_7G00174940
rosa_rugosa	Rorug06G0227900
rosa_samantha	Rh5AG357200 Rh5DG382900 Rh6AG341000 Rh6AG341100 Rh6BG089400 Rh6BG348500 Rh6CG355300 Rh6CG355400 Rh6DG341100 Rh6DG341200
rosa_wichuraiana	Rw6G029710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	932
AarI	CACCTGC	1 cut(s)	1333
Acc36I	ACCTGC	3 cut(s)	182, 1333, 1996
Acc65I	GGTACC	1 cut(s)	881
AccB1I	GGYRCC	2 cut(s)	4, 881
AccB7I	CCANNNNNTGG	2 cut(s)	687, 2077
AccI	GTMKAC	1 cut(s)	1271
AciI	CCGC	3 cut(s)	75, 1037, 1364
AclWI	GGATC	1 cut(s)	319
AcoI	YGGCCR	1 cut(s)	1490
AcsI	RAATTY	1 cut(s)	2066
AcuI	CTGAAG	2 cut(s)	381, 1124
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	9 cut(s)	167, 472, 594, 694, 883, 899, 1042, 1342, 1645
AfiI	CCNNNNNNNGG	3 cut(s)	218, 687, 2077
AflIII	ACRYGT	3 cut(s)	573, 998, 1198
AgsI	TTSAA	6 cut(s)	1007, 1058, 1301, 1594, 1613, 1972
AhlI	ACTAGT	1 cut(s)	1676
AjnI	CCWGG	5 cut(s)	795, 1219, 1453, 1575, 2128
AloI	GAACNNNNNNTCC	2 cut(s)	516, 548
AluBI	AGCT	8 cut(s)	424, 548, 1469, 1690, 1863, 1889, 1951, 1980
AluI	AGCT	8 cut(s)	424, 548, 1469, 1690, 1863, 1889, 1951, 1980
Alw21I	GWGCWC	5 cut(s)	467, 1198, 1692, 1878, 1891
Alw26I	GTCTC	4 cut(s)	582, 1481, 1784, 2025
AlwI	GGATC	1 cut(s)	319
AlwNI	CAGNNNCTG	1 cut(s)	1863
Ama87I	CYCGRG	1 cut(s)	1582
AoxI	GGCC	6 cut(s)	38, 214, 826, 1079, 1490, 1587
ApaI	GGGCCC	2 cut(s)	42, 218
ApoI	RAATTY	1 cut(s)	2066
ArsI	GACNNNNNNTTYG	2 cut(s)	1946, 1978
Asp700I	GAANNNNTTC	1 cut(s)	230
Asp718I	GGTACC	1 cut(s)	881
AspLEI	GCGC	2 cut(s)	7, 1618
AsuC2I	CCSGG	4 cut(s)	213, 219, 1338, 1685
AsuHPI	GGTGA	8 cut(s)	161, 385, 487, 1022, 1209, 1673, 1689, 1946
AvaI	CYCGRG	1 cut(s)	1582
AvaII	GGWCC	6 cut(s)	194, 912, 1108, 1395, 1572, 1909
BaeGI	GKGCMC	2 cut(s)	42, 218
BalI	TGGCCA	1 cut(s)	1492
BanI	GGYRCC	2 cut(s)	4, 881
BanII	GRGCYC	4 cut(s)	42, 218, 1692, 1891
BarI	GAAGNNNNNNTAC	2 cut(s)	218, 250
Bbv12I	GWGCWC	5 cut(s)	467, 1198, 1692, 1878, 1891
BccI	CCATC	7 cut(s)	80, 278, 508, 1387, 1482, 1919, 1982
BceAI	ACGGC	2 cut(s)	765, 1623
BcgI	CGANNNNNNTGC	2 cut(s)	254, 288
BciT130I	CCWGG	5 cut(s)	797, 1221, 1455, 1577, 2130
BciVI	GTATCC	1 cut(s)	768
BcnI	CCSGG	4 cut(s)	213, 219, 1338, 1685
BcoDI	GTCTC	4 cut(s)	582, 1481, 1784, 2025
BcuI	ACTAGT	1 cut(s)	1676
BfaI	CTAG	2 cut(s)	1677, 1716
BfoI	RGCGCY	2 cut(s)	8, 1619
BfuAI	ACCTGC	3 cut(s)	182, 1333, 1996
BfuI	GTATCC	1 cut(s)	768
BglI	GCCNNNNNGGC	1 cut(s)	667
Bme1390I	CCNGG	9 cut(s)	213, 219, 797, 1221, 1338, 1455, 1577, 1685, 2130
Bme18I	GGWCC	6 cut(s)	194, 912, 1108, 1395, 1572, 1909
BmeT110I	CYCGRG	1 cut(s)	1582
BmiI	GGNNCC	9 cut(s)	6, 39, 40, 216, 217, 883, 1397, 1573, 1574
BmrFI	CCNGG	9 cut(s)	213, 219, 797, 1221, 1338, 1455, 1577, 1685, 2130
BmrI	ACTGGG	1 cut(s)	1077
BmsI	GCATC	6 cut(s)	97, 718, 815, 1108, 1150, 2028
BmuI	ACTGGG	1 cut(s)	1077
BpuEI	CTTGAG	1 cut(s)	228
BpuMI	CCSGG	4 cut(s)	213, 219, 1338, 1685
Bsa29I	ATCGAT	2 cut(s)	946, 1986
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	1784
BsaJI	CCNNGG	9 cut(s)	8, 217, 908, 1160, 1220, 1575, 1598, 1639, 2076
BsaXI	ACNNNNNCTCC	4 cut(s)	213, 243, 1878, 1908
Bsc4I	CCNNNNNNNGG	3 cut(s)	218, 687, 2077
Bse118I	RCCGGY	1 cut(s)	20
Bse3DI	GCAATG	2 cut(s)	340, 1427
BseBI	CCWGG	5 cut(s)	797, 1221, 1455, 1577, 2130
BseCI	ATCGAT	2 cut(s)	946, 1986
BseDI	CCNNGG	9 cut(s)	8, 217, 908, 1160, 1220, 1575, 1598, 1639, 2076
BseGI	GGATG	6 cut(s)	83, 733, 1123, 1141, 2026, 2147
BseLI	CCNNNNNNNGG	3 cut(s)	218, 687, 2077
BseMI	GCAATG	2 cut(s)	340, 1427
BseMII	CTCAG	5 cut(s)	402, 473, 593, 1769, 1938
BseRI	GAGGAG	1 cut(s)	762
BseSI	GKGCMC	2 cut(s)	42, 218
BseYI	CCCAGC	1 cut(s)	722
BsgI	GTGCAG	2 cut(s)	210, 1041
BshFI	GGCC	6 cut(s)	40, 216, 828, 1081, 1492, 1589
BshNI	GGYRCC	2 cut(s)	4, 881
BshVI	ATCGAT	2 cut(s)	946, 1986
BsiHKAI	GWGCWC	5 cut(s)	467, 1198, 1692, 1878, 1891
BsiHKCI	CYCGRG	1 cut(s)	1582
BsiSI	CCGG	5 cut(s)	21, 212, 219, 1337, 1685
BslFI	GGGAC	3 cut(s)	626, 1532, 1558
BslI	CCNNNNNNNGG	3 cut(s)	218, 687, 2077
BsmAI	GTCTC	4 cut(s)	582, 1481, 1784, 2025
BsmFI	GGGAC	3 cut(s)	626, 1532, 1558
BsnI	GGCC	6 cut(s)	40, 216, 828, 1081, 1492, 1589
Bso31I	GGTCTC	1 cut(s)	1784
BsoBI	CYCGRG	1 cut(s)	1582
Bsp120I	GGGCCC	2 cut(s)	38, 214
Bsp1286I	GDGCHC	7 cut(s)	42, 218, 467, 1198, 1692, 1878, 1891
Bsp143I	GATC	4 cut(s)	324, 943, 1207, 1983
Bsp19I	CCATGG	2 cut(s)	908, 2076
BspACI	CCGC	3 cut(s)	75, 1037, 1364
BspANI	GGCC	6 cut(s)	40, 216, 828, 1081, 1492, 1589
BspCNI	CTCAG	5 cut(s)	403, 472, 592, 1768, 1939
BspDI	ATCGAT	2 cut(s)	946, 1986
BspHI	TCATGA	1 cut(s)	1330
BspLI	GGNNCC	9 cut(s)	6, 39, 40, 216, 217, 883, 1397, 1573, 1574
BspMI	ACCTGC	3 cut(s)	182, 1333, 1996
BspPI	GGATC	1 cut(s)	319
BspT107I	GGYRCC	2 cut(s)	4, 881
BspTNI	GGTCTC	1 cut(s)	1784
BsrDI	GCAATG	2 cut(s)	340, 1427
BsrFI	RCCGGY	1 cut(s)	20
BssAI	RCCGGY	1 cut(s)	20
BssECI	CCNNGG	9 cut(s)	8, 217, 908, 1160, 1220, 1575, 1598, 1639, 2076
BssMI	GATC	4 cut(s)	324, 943, 1207, 1983
BssNAI	GTATAC	1 cut(s)	1272
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	4 cut(s)	908, 1160, 1598, 2076
Bst1107I	GTATAC	1 cut(s)	1272
Bst2UI	CCWGG	5 cut(s)	797, 1221, 1455, 1577, 2130
Bst4CI	ACNGT	4 cut(s)	49, 895, 1523, 1777
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	2 cut(s)	812, 1839
BstC8I	GCNNGC	4 cut(s)	183, 836, 1918, 2135
BstDEI	CTNAG	7 cut(s)	411, 425, 459, 579, 1755, 1797, 1947
BstDSI	CCRYGG	3 cut(s)	908, 1639, 2076
BstEII	GGTNACC	1 cut(s)	2008
BstF5I	GGATG	6 cut(s)	83, 733, 1123, 1141, 2026, 2147
BstH2I	RGCGCY	2 cut(s)	8, 1619
BstHHI	GCGC	2 cut(s)	7, 1618
BstKTI	GATC	4 cut(s)	327, 946, 1210, 1986
BstMAI	GTCTC	4 cut(s)	582, 1481, 1784, 2025
BstMBI	GATC	4 cut(s)	324, 943, 1207, 1983
BstNI	CCWGG	5 cut(s)	797, 1221, 1455, 1577, 2130
BstNSI	RCATGY	7 cut(s)	185, 189, 577, 735, 838, 1202, 1546
BstPI	GGTNACC	1 cut(s)	2008
BstSCI	CCNGG	9 cut(s)	211, 217, 795, 1219, 1336, 1453, 1575, 1683, 2128
BstSLI	GKGCMC	2 cut(s)	42, 218
BstX2I	RGATCY	1 cut(s)	324
BstXI	CCANNNNNNTGG	1 cut(s)	980
BstYI	RGATCY	1 cut(s)	324
BstZ17I	GTATAC	1 cut(s)	1272
Bsu15I	ATCGAT	2 cut(s)	946, 1986
BsuI	GTATCC	1 cut(s)	768
BsuRI	GGCC	6 cut(s)	40, 216, 828, 1081, 1492, 1589
BsuTUI	ATCGAT	2 cut(s)	946, 1986
BtgI	CCRYGG	3 cut(s)	908, 1639, 2076
BtgZI	GCGATG	1 cut(s)	99
BtsCI	GGATG	6 cut(s)	83, 733, 1123, 1141, 2026, 2147
BtsI	GCAGTG	2 cut(s)	1465, 2002
BtsIMutI	CAGTG	5 cut(s)	688, 862, 1465, 1528, 2002
BveI	ACCTGC	3 cut(s)	182, 1333, 1996
Cac8I	GCNNGC	4 cut(s)	183, 836, 1918, 2135
CaiI	CAGNNNCTG	1 cut(s)	1863
CciI	TCATGA	1 cut(s)	1330
CfoI	GCGC	2 cut(s)	7, 1618
Cfr10I	RCCGGY	1 cut(s)	20
ClaI	ATCGAT	2 cut(s)	946, 1986
Csp6I	GTAC	9 cut(s)	166, 471, 593, 693, 882, 898, 1041, 1341, 1644
CviQI	GTAC	9 cut(s)	166, 471, 593, 693, 882, 898, 1041, 1341, 1644
DdeI	CTNAG	7 cut(s)	411, 425, 459, 579, 1755, 1797, 1947
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	4 cut(s)	326, 945, 1209, 1985
DpnII	GATC	4 cut(s)	324, 943, 1207, 1983
EaeI	YGGCCR	1 cut(s)	1490
Ecl136II	GAGCTC	2 cut(s)	1690, 1889
Eco130I	CCWWGG	4 cut(s)	908, 1160, 1598, 2076
Eco24I	GRGCYC	4 cut(s)	42, 218, 1692, 1891
Eco31I	GGTCTC	1 cut(s)	1784
Eco32I	GATATC	1 cut(s)	1215
Eco47I	GGWCC	6 cut(s)	194, 912, 1108, 1395, 1572, 1909
Eco53kI	GAGCTC	2 cut(s)	1690, 1889
Eco57I	CTGAAG	2 cut(s)	381, 1124
Eco88I	CYCGRG	1 cut(s)	1582
Eco91I	GGTNACC	1 cut(s)	2008
EcoICRI	GAGCTC	2 cut(s)	1690, 1889
EcoO109I	RGGNCCY	5 cut(s)	38, 194, 215, 1572, 1587
EcoO65I	GGTNACC	1 cut(s)	2008
EcoRI	GAATTC	1 cut(s)	2066
EcoRII	CCWGG	5 cut(s)	795, 1219, 1453, 1575, 2128
EcoRV	GATATC	1 cut(s)	1215
EcoT14I	CCWWGG	4 cut(s)	908, 1160, 1598, 2076
EcoT22I	ATGCAT	3 cut(s)	187, 733, 808
EcoT38I	GRGCYC	4 cut(s)	42, 218, 1692, 1891
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	4 cut(s)	908, 1160, 1598, 2076
FalI	AAGNNNNNCTT	4 cut(s)	656, 688, 1605, 1637
FaqI	GGGAC	3 cut(s)	626, 1532, 1558
FauI	CCCGC	1 cut(s)	1030
FauNDI	CATATG	1 cut(s)	271
FblI	GTMKAC	1 cut(s)	1271
FokI	GGATG	6 cut(s)	90, 740, 1128, 1130, 2033, 2134
FriOI	GRGCYC	4 cut(s)	42, 218, 1692, 1891
FspBI	CTAG	2 cut(s)	1677, 1716
GlaI	GCGC	2 cut(s)	6, 1617
GsaI	CCCAGC	1 cut(s)	726
HaeII	RGCGCY	2 cut(s)	8, 1619
HaeIII	GGCC	6 cut(s)	40, 216, 828, 1081, 1492, 1589
HapII	CCGG	5 cut(s)	21, 212, 219, 1337, 1685
HhaI	GCGC	2 cut(s)	7, 1618
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	2 cut(s)	5, 1616
HinP1I	GCGC	2 cut(s)	5, 1616
HindIII	AAGCTT	1 cut(s)	1978
HinfI	GANTC	7 cut(s)	161, 525, 990, 1512, 1580, 1662, 2125
HpaII	CCGG	5 cut(s)	21, 212, 219, 1337, 1685
HphI	GGTGA	8 cut(s)	161, 385, 487, 1022, 1209, 1673, 1689, 1946
Hpy188III	TCNNGA	7 cut(s)	569, 1145, 1205, 1307, 1331, 1388, 1780
Hpy99I	CGWCG	1 cut(s)	608
HpyCH4III	ACNGT	4 cut(s)	49, 895, 1523, 1777
HpyCH4IV	ACGT	1 cut(s)	998
HpyF3I	CTNAG	7 cut(s)	411, 425, 459, 579, 1755, 1797, 1947
HpySE526I	ACGT	1 cut(s)	998
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	2 cut(s)	5, 1616
KasI	GGCGCC	1 cut(s)	4
KflI	GGGWCCC	1 cut(s)	1572
KpnI	GGTACC	1 cut(s)	885
Kzo9I	GATC	4 cut(s)	324, 943, 1207, 1983
LmnI	GCTCC	7 cut(s)	482, 1474, 1687, 1695, 1860, 1886, 1894
LweI	GCATC	6 cut(s)	97, 718, 815, 1108, 1150, 2028
MaeI	CTAG	2 cut(s)	1677, 1716
MaeII	ACGT	1 cut(s)	998
MaeIII	GTNAC	8 cut(s)	248, 700, 1316, 1672, 1679, 1708, 1849, 2008
MalI	GATC	4 cut(s)	326, 945, 1209, 1985
MboI	GATC	4 cut(s)	324, 943, 1207, 1983
MboII	GAAGA	5 cut(s)	293, 449, 1070, 1548, 2120
MflI	RGATCY	1 cut(s)	324
MhlI	GDGCHC	7 cut(s)	42, 218, 467, 1198, 1692, 1878, 1891
MlsI	TGGCCA	1 cut(s)	1492
MluNI	TGGCCA	1 cut(s)	1492
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	1521, 1574, 1671
MmeI	TCCRAC	4 cut(s)	668, 1204, 1651, 1876
Mox20I	TGGCCA	1 cut(s)	1492
Mph1103I	ATGCAT	3 cut(s)	187, 733, 808
MroXI	GAANNNNTTC	1 cut(s)	230
MscI	TGGCCA	1 cut(s)	1492
MseI	TTAA	1 cut(s)	1503
MslI	CAYNNNNRTG	3 cut(s)	186, 372, 1871
Msp20I	TGGCCA	1 cut(s)	1492
MspA1I	CMGCKG	1 cut(s)	75
MspI	CCGG	5 cut(s)	21, 212, 219, 1337, 1685
MspR9I	CCNGG	9 cut(s)	213, 219, 797, 1221, 1338, 1455, 1577, 1685, 2130
MvaI	CCWGG	5 cut(s)	797, 1221, 1455, 1577, 2130
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	4 cut(s)	213, 219, 1338, 1685
NcoI	CCATGG	2 cut(s)	908, 2076
NdeI	CATATG	1 cut(s)	271
NdeII	GATC	4 cut(s)	324, 943, 1207, 1983
NlaIV	GGNNCC	9 cut(s)	6, 39, 40, 216, 217, 883, 1397, 1573, 1574
NmeAIII	GCCGAG	2 cut(s)	33, 85
NmuCI	GTSAC	6 cut(s)	248, 700, 1316, 1679, 1708, 1849
NsiI	ATGCAT	3 cut(s)	187, 733, 808
NspI	RCATGY	7 cut(s)	185, 189, 577, 735, 838, 1202, 1546
PaeI	GCATGC	2 cut(s)	185, 838
PaeR7I	CTCGAG	1 cut(s)	1582
PagI	TCATGA	1 cut(s)	1330
PaqCI	CACCTGC	1 cut(s)	1333
PciI	ACATGT	2 cut(s)	573, 1198
PdmI	GAANNNNTTC	1 cut(s)	230
PfeI	GAWTC	4 cut(s)	161, 525, 990, 2125
PflMI	CCANNNNNTGG	2 cut(s)	687, 2077
PleI	GAGTC	3 cut(s)	1520, 1574, 1670
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	3 cut(s)	1520, 1574, 1670
PpuMI	RGGWCCY	2 cut(s)	194, 1572
PscI	ACATGT	2 cut(s)	573, 1198
PsiI	TTATAA	1 cut(s)	932
Psp124BI	GAGCTC	2 cut(s)	1692, 1891
Psp5II	RGGWCCY	2 cut(s)	194, 1572
Psp6I	CCWGG	5 cut(s)	795, 1219, 1453, 1575, 2128
PspEI	GGTNACC	1 cut(s)	2008
PspFI	CCCAGC	1 cut(s)	722
PspGI	CCWGG	5 cut(s)	795, 1219, 1453, 1575, 2128
PspN4I	GGNNCC	9 cut(s)	6, 39, 40, 216, 217, 883, 1397, 1573, 1574
PspOMI	GGGCCC	2 cut(s)	38, 214
PspPPI	RGGWCCY	2 cut(s)	194, 1572
PspXI	VCTCGAGB	1 cut(s)	1582
PsrI	GAACNNNNNNTAC	2 cut(s)	73, 105
PstNI	CAGNNNCTG	1 cut(s)	1863
PsuI	RGATCY	1 cut(s)	324
RsaI	GTAC	9 cut(s)	167, 472, 594, 694, 883, 899, 1042, 1342, 1645
RsaNI	GTAC	9 cut(s)	166, 471, 593, 693, 882, 898, 1041, 1341, 1644
RseI	CAYNNNNRTG	3 cut(s)	186, 372, 1871
SacI	GAGCTC	2 cut(s)	1692, 1891
SaqAI	TTAA	1 cut(s)	1503
Sau3AI	GATC	4 cut(s)	324, 943, 1207, 1983
SchI	GAGTC	3 cut(s)	1521, 1574, 1671
ScrFI	CCNGG	9 cut(s)	213, 219, 797, 1221, 1338, 1455, 1577, 1685, 2130
SduI	GDGCHC	7 cut(s)	42, 218, 467, 1198, 1692, 1878, 1891
SfaNI	GCATC	6 cut(s)	97, 718, 815, 1108, 1150, 2028
SfoI	GGCGCC	1 cut(s)	6
Sfr274I	CTCGAG	1 cut(s)	1582
SinI	GGWCC	6 cut(s)	194, 912, 1108, 1395, 1572, 1909
SlaI	CTCGAG	1 cut(s)	1582
SmiMI	CAYNNNNRTG	3 cut(s)	186, 372, 1871
SmlI	CTYRAG	2 cut(s)	243, 1582
SmoI	CTYRAG	2 cut(s)	243, 1582
SpeI	ACTAGT	1 cut(s)	1676
SphI	GCATGC	2 cut(s)	185, 838
SsiI	CCGC	3 cut(s)	75, 1037, 1364
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	2 cut(s)	55, 1500
SspMI	CTAG	2 cut(s)	1677, 1716
SstI	GAGCTC	2 cut(s)	1692, 1891
StyD4I	CCNGG	9 cut(s)	211, 217, 795, 1219, 1336, 1453, 1575, 1683, 2128
StyI	CCWWGG	4 cut(s)	908, 1160, 1598, 2076
TaaI	ACNGT	4 cut(s)	49, 895, 1523, 1777
TaiI	ACGT	1 cut(s)	1001
TaqI	TCGA	8 cut(s)	172, 264, 946, 1583, 1760, 1965, 1986, 2115
TatI	WGTACW	4 cut(s)	470, 592, 692, 897
TfiI	GAWTC	4 cut(s)	161, 525, 990, 2125
Tru1I	TTAA	1 cut(s)	1503
Tru9I	TTAA	1 cut(s)	1503
TscAI	CASTG	5 cut(s)	688, 862, 1465, 1528, 2002
TseFI	GTSAC	6 cut(s)	248, 700, 1316, 1679, 1708, 1849
Tsp45I	GTSAC	6 cut(s)	248, 700, 1316, 1679, 1708, 1849
TspDTI	ATGAA	9 cut(s)	390, 450, 968, 1029, 1347, 1360, 2040, 2079, 2083
TspRI	CASTG	5 cut(s)	688, 862, 1465, 1528, 2002
Van91I	CCANNNNNTGG	2 cut(s)	687, 2077
VpaK11BI	GGWCC	6 cut(s)	194, 912, 1108, 1395, 1572, 1909
XapI	RAATTY	1 cut(s)	2066
XceI	RCATGY	7 cut(s)	185, 189, 577, 735, 838, 1202, 1546
XcmI	CCANNNNNNNNNTGG	1 cut(s)	650
XhoI	CTCGAG	1 cut(s)	1582
XmiI	GTMKAC	1 cut(s)	1271
XmnI	GAANNNNTTC	1 cut(s)	230
XspI	CTAG	2 cut(s)	1677, 1716
Zsp2I	ATGCAT	3 cut(s)	187, 733, 808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.