pycom02g03950

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
2631166 .. 2633260
2095 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g03950.3

Sequence Viewer

Length: 1725 bp
ATGGCTGCACAGAGAAGTTTTCTGCTGCTGTTTTTCTCATGTTTCTTCATGCAGTATCTTCTCCCTTGTTATGCAGAAATAGTGCTGTACACGCTCAAGCAAGGGGAGCAGCTACGGGACCAGGAAAACGATCACCTCGTTTCTCAGCACGGTGACTTCAAGCTAGGGTTCTTCAGTCCCGGTGCTTCGAGTAACCTGGGTGCTACGAGCAATCGGTTCTTGGGAATATGGTATAGCAAACTACCAAATCATACGGATGCGGTGTGGGTGGGAAACCCTGAAACTCCGGTCGTGGATTCGTCTGGAGTGTTTGTGTTGGATAGTGATGGGAAAATGAAGATCAAACATGGTGGAGGGGAGATTATTGTATGGGATTACAATCAGACAGTTTCCGGTAATGTGACTTGTTATATGATGGATACCGGAAACTTTATGTTAAGAGAAGTAGCATCGGATGGAACACCTGGAAAGATTTTATGGGAAAGTTTTGATTATCCATCAAACACATTGTTACCTGGAATGAAGTTAGGGTTGGACTTTAGGACAGGGCGTAATCGAACAATTTCTTCATGGTTCAGCGATCAAGTGCCTACAGCAGGTGCTTTCAGGCTTGGTGTAGATCCCAGTAGCACCAACCGGTTAATCATCTGGCAGCGAGATGTTGTATACTGGACCAGTGGGATCTGGGAAAGTGGAAGTTTTCAGAGGACCCCTGAACTCACAAGCAGGGCTGATTTGTTCGAGTTCAATTTTGTTTCAAATGCAGAGGAGAAGTACTTCACTTATGCTGTTAAAAACAGGTCAACTCTTTCGAGATGGGAACTCAATACTTGGGGCCAACTCCTGCAGTCGATTTTAGGCTCAGACGGTACTACATGGGAAACCACAGCTACAAGTTCATGTACGTTCAACCCAGATTATCCAGATGCAGTGTGCATAAAGCAATGCAGGAATGGTCCTGAGCTATTTCTACCGATGAGAGGCTACTCAGGTGATGCTAAGTTGACGTATAATGATAGTAATACTAACTTGGATCTTAGCAATTGTCACGCAACTTGCTGGAGTGATTGCACCTGTGTCGGCTACGGACCTTTATATCCCAATGGGTCTGGATGTCTGTATATGAGAGAAGGAGCTTATGTCAAGAACGATTACTTTGGAGTTAATTACTTCGTTATTATAGCAAATAATAGCAGAGATGGAGCACCTACCGAAAAAGGAAGTACAAAGAGAAAATGGTGGATATGGTTTATTGTAGGCATTGTAATTGCTGTGGCAGTGCTACTTTTGGGGTACTTCTGCTACACAAGGAAAAGAAAACTTCAACACGTGCAACAAACTGACAAGGCGGAAACAATCCAAGAGCAAGGATTACTTGACTTGGGATCCCATATCAGCGGATTGGGTGACATTTTCAAACTCAAATTCGGCAAAAGCCGAGGGCTGGAGTTTAAGATGTTCAGTTTTCCTGAATTAGTGACTGCAACAGATGACTTCTCATTTGCCCGAAGACTAGGAGAGGGTGGTTTTGGACCAGTTTACAAGGGTGTATTACCAGACGGGCAACAGGTAGCAGTAAAGAGACTTGCAAGACATTCAGGACAAGGATTGGAAGAATTCATGAATGAGATAACACTTATAGCTGAACTTCAACATAGTAATCTTGTTCGGCTTTTGGGTTGTTGCATTCAAGGAGAAGAGAAAATTCGATCTACGAATACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

575

Amino Acids

64.4

Weight (kDa)

6.05

Isoelectric Point (pI)

30.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 587
Acc36I ACCTGC 1 cut(s) 587
AccI GTMKAC 1 cut(s) 666
AciI CCGC 3 cut(s) 260, 1349, 1398
AclWI GGATC 5 cut(s) 614, 689, 1041, 1380, 1393
AcsI RAATTY 3 cut(s) 1424, 1616, 1704
AcuI CTGAAG 1 cut(s) 157
AcvI CACGTG 1 cut(s) 1330
AfaI GTAC 6 cut(s) 89, 776, 871, 904, 1225, 1295
AfiI CCNNNNNNNGG 3 cut(s) 596, 980, 1444
AflIII ACRYGT 1 cut(s) 1327
AgeI ACCGGT 1 cut(s) 636
AgsI TTSAA 8 cut(s) 160, 748, 759, 910, 1325, 1417, 1652, 1691
AjnI CCWGG 4 cut(s) 120, 195, 463, 514
AjuI GAANNNNNNNTTGG 2 cut(s) 515, 547
AluBI AGCT 6 cut(s) 112, 163, 890, 964, 1136, 1643
AluI AGCT 6 cut(s) 112, 163, 890, 964, 1136, 1643
Alw21I GWGCWC 1 cut(s) 1207
Alw26I GTCTC 1 cut(s) 1576
AlwI GGATC 5 cut(s) 614, 689, 1041, 1380, 1393
AoxI GGCC 1 cut(s) 835
ApeKI GCWGC 4 cut(s) 5, 25, 109, 652
ApoI RAATTY 3 cut(s) 1424, 1616, 1704
ArsI GACNNNNNNTTYG 2 cut(s) 1484, 1516
AsiGI ACCGGT 1 cut(s) 636
Asp700I GAANNNNTTC 2 cut(s) 562, 776
AspS9I GGNCC 7 cut(s) 118, 672, 708, 835, 956, 1088, 1532
AsuC2I CCSGG 1 cut(s) 180
AsuHPI GGTGA 4 cut(s) 125, 164, 1004, 1418
AvaII GGWCC 6 cut(s) 118, 672, 708, 956, 1088, 1532
BamHI GGATCC 1 cut(s) 1385
BbrPI CACGTG 1 cut(s) 1330
BbsI GAAGAC 1 cut(s) 1516
Bbv12I GWGCWC 1 cut(s) 1207
BbvI GCAGC 3 cut(s) 12, 121, 664
BccI CCATC 6 cut(s) 320, 409, 449, 505, 810, 1193
BcgI CGANNNNNNTGC 2 cut(s) 1060, 1094
BciT130I CCWGG 4 cut(s) 122, 197, 465, 516
BciVI GTATCC 1 cut(s) 412
BcnI CCSGG 1 cut(s) 180
BcoDI GTCTC 1 cut(s) 1576
BfaI CTAG 2 cut(s) 164, 1514
BfmI CTRYAG 2 cut(s) 591, 845
BfuAI ACCTGC 1 cut(s) 587
BfuI GTATCC 1 cut(s) 412
BisI GCNGC 4 cut(s) 6, 26, 110, 653
BlsI GCNGC 4 cut(s) 7, 27, 111, 654
BmcAI AGTACT 1 cut(s) 776
Bme1390I CCNGG 5 cut(s) 122, 180, 197, 465, 516
Bme18I GGWCC 6 cut(s) 118, 672, 708, 956, 1088, 1532
BmgT120I GGNCC 7 cut(s) 118, 672, 708, 835, 956, 1088, 1532
BmiI GGNNCC 4 cut(s) 119, 710, 836, 1387
BmrFI CCNGG 5 cut(s) 122, 180, 197, 465, 516
BmrI ACTGGG 1 cut(s) 618
BmsI GCATC 4 cut(s) 247, 458, 916, 985
BmuI ACTGGG 1 cut(s) 618
BpiI GAAGAC 1 cut(s) 1516
BpmI CTGGAG 3 cut(s) 324, 1081, 1466
Bpu10I CCTNAGC 1 cut(s) 960
BpuEI CTTGAG 1 cut(s) 80
BpuMI CCSGG 1 cut(s) 180
BsaAI YACGTR 1 cut(s) 1330
BsaBI GATNNNNATC 1 cut(s) 378
BsaJI CCNNGG 2 cut(s) 196, 1438
BsaWI WCCGGW 4 cut(s) 286, 392, 422, 636
BsaXI ACNNNNNCTCC 4 cut(s) 297, 327, 1125, 1155
Bsc4I CCNNNNNNNGG 3 cut(s) 596, 980, 1444
Bse118I RCCGGY 1 cut(s) 636
Bse1I ACTGG 4 cut(s) 624, 674, 675, 1535
Bse3DI GCAATG 1 cut(s) 950
Bse8I GATNNNNATC 1 cut(s) 378
BseBI CCWGG 4 cut(s) 122, 197, 465, 516
BseDI CCNNGG 2 cut(s) 196, 1438
BseGI GGATG 3 cut(s) 262, 460, 1118
BseJI GATNNNNATC 1 cut(s) 378
BseLI CCNNNNNNNGG 3 cut(s) 596, 980, 1444
BseMI GCAATG 1 cut(s) 950
BseMII CTCAG 4 cut(s) 158, 876, 951, 1002
BseNI ACTGG 4 cut(s) 624, 674, 675, 1535
BseRI GAGGAG 1 cut(s) 782
BseXI GCAGC 3 cut(s) 12, 121, 664
Bsh1285I CGRYCG 1 cut(s) 291
BshFI GGCC 1 cut(s) 837
BshTI ACCGGT 1 cut(s) 636
BsiEI CGRYCG 1 cut(s) 291
BsiHKAI GWGCWC 1 cut(s) 1207
BsiSI CCGG 5 cut(s) 180, 287, 393, 423, 637
BslFI GGGAC 2 cut(s) 131, 162
BslI CCNNNNNNNGG 3 cut(s) 596, 980, 1444
BsmAI GTCTC 1 cut(s) 1576
BsmFI GGGAC 2 cut(s) 131, 162
BsmI GAATGC 1 cut(s) 1686
BsnI GGCC 1 cut(s) 837
Bsp1286I GDGCHC 1 cut(s) 1207
Bsp1407I TGTACA 1 cut(s) 87
Bsp143I GATC 8 cut(s) 130, 339, 580, 619, 681, 1033, 1385, 1709
BspACI CCGC 3 cut(s) 260, 1349, 1398
BspANI GGCC 1 cut(s) 837
BspCNI CTCAG 4 cut(s) 157, 875, 952, 1001
BspHI TCATGA 1 cut(s) 1620
BspLI GGNNCC 4 cut(s) 119, 710, 836, 1387
BspMAI CTGCAG 1 cut(s) 849
BspMI ACCTGC 1 cut(s) 587
BspPI GGATC 5 cut(s) 614, 689, 1041, 1380, 1393
BsrDI GCAATG 1 cut(s) 950
BsrFI RCCGGY 1 cut(s) 636
BsrGI TGTACA 1 cut(s) 87
BsrI ACTGG 4 cut(s) 624, 674, 675, 1535
BssAI RCCGGY 1 cut(s) 636
BssECI CCNNGG 2 cut(s) 196, 1438
BssMI GATC 8 cut(s) 130, 339, 580, 619, 681, 1033, 1385, 1709
BssNAI GTATAC 1 cut(s) 667
Bst1107I GTATAC 1 cut(s) 667
Bst2UI CCWGG 4 cut(s) 122, 197, 465, 516
Bst4CI ACNGT 3 cut(s) 152, 388, 869
Bst6I CTCTTC 1 cut(s) 1692
BstAUI TGTACA 1 cut(s) 87
BstBAI YACGTR 1 cut(s) 1330
BstDEI CTNAG 6 cut(s) 144, 862, 960, 988, 999, 1037
BstENI CCTNNNNNAGG 1 cut(s) 594
BstF5I GGATG 3 cut(s) 262, 460, 1118
BstKTI GATC 8 cut(s) 133, 342, 583, 622, 684, 1036, 1388, 1712
BstMAI GTCTC 1 cut(s) 1576
BstMBI GATC 8 cut(s) 130, 339, 580, 619, 681, 1033, 1385, 1709
BstMCI CGRYCG 1 cut(s) 291
BstMWI GCNNNNNNNGC 2 cut(s) 91, 106
BstNI CCWGG 4 cut(s) 122, 197, 465, 516
BstSCI CCNGG 5 cut(s) 120, 178, 195, 463, 514
BstSFI CTRYAG 2 cut(s) 591, 845
BstV1I GCAGC 3 cut(s) 12, 121, 664
BstV2I GAAGAC 1 cut(s) 1516
BstX2I RGATCY 4 cut(s) 619, 681, 1033, 1385
BstYI RGATCY 4 cut(s) 619, 681, 1033, 1385
BstZ17I GTATAC 1 cut(s) 667
BsuI GTATCC 1 cut(s) 412
BsuRI GGCC 1 cut(s) 837
BtsCI GGATG 3 cut(s) 262, 460, 1118
BtsI GCAGTG 2 cut(s) 936, 1284
BtsIMutI CAGTG 3 cut(s) 682, 936, 1284
BveI ACCTGC 1 cut(s) 587
CciI TCATGA 1 cut(s) 1620
Cfr10I RCCGGY 1 cut(s) 636
Cfr13I GGNCC 7 cut(s) 118, 672, 708, 835, 956, 1088, 1532
Csp6I GTAC 6 cut(s) 88, 775, 870, 903, 1224, 1294
CspAI ACCGGT 1 cut(s) 636
CspCI CAANNNNNGTGG 2 cut(s) 331, 366
CviAII CATG 7 cut(s) 39, 49, 347, 570, 876, 900, 1621
CviQI GTAC 6 cut(s) 88, 775, 870, 903, 1224, 1294
DdeI CTNAG 6 cut(s) 144, 862, 960, 988, 999, 1037
DpnI GATC 8 cut(s) 132, 341, 582, 621, 683, 1035, 1387, 1711
DpnII GATC 8 cut(s) 130, 339, 580, 619, 681, 1033, 1385, 1709
Eam1104I CTCTTC 1 cut(s) 1692
EarI CTCTTC 1 cut(s) 1692
EciI GGCGGA 1 cut(s) 1364
Eco47I GGWCC 6 cut(s) 118, 672, 708, 956, 1088, 1532
Eco57I CTGAAG 1 cut(s) 157
Eco72I CACGTG 1 cut(s) 1330
EcoNI CCTNNNNNAGG 1 cut(s) 594
EcoO109I RGGNCCY 1 cut(s) 708
EcoRI GAATTC 1 cut(s) 1616
EcoRII CCWGG 4 cut(s) 120, 195, 463, 514
FaeI CATG 7 cut(s) 42, 52, 350, 573, 879, 903, 1624
FalI AAGNNNNNCTT 2 cut(s) 1359, 1391
FaqI GGGAC 2 cut(s) 131, 162
FatI CATG 7 cut(s) 38, 48, 346, 569, 875, 899, 1620
FblI GTMKAC 1 cut(s) 666
Fnu4HI GCNGC 4 cut(s) 6, 26, 110, 653
FokI GGATG 3 cut(s) 269, 467, 1125
Fsp4HI GCNGC 4 cut(s) 6, 26, 110, 653
FspBI CTAG 2 cut(s) 164, 1514
GluI GCNGC 4 cut(s) 6, 26, 110, 653
GsuI CTGGAG 3 cut(s) 324, 1081, 1466
HaeIII GGCC 1 cut(s) 837
HapII CCGG 5 cut(s) 180, 287, 393, 423, 637
Hin1II CATG 7 cut(s) 42, 52, 350, 573, 879, 903, 1624
HincII GTYRAC 2 cut(s) 804, 1005
HindII GTYRAC 2 cut(s) 804, 1005
HinfI GANTC 1 cut(s) 296
HpaII CCGG 5 cut(s) 180, 287, 393, 423, 637
HphI GGTGA 4 cut(s) 125, 164, 1004, 1418
Hpy166II GTNNAC 5 cut(s) 90, 667, 804, 1005, 1540
Hpy188I TCNGA 4 cut(s) 384, 454, 705, 865
Hpy188III TCNNGA 9 cut(s) 303, 813, 923, 959, 1110, 1144, 1469, 1599, 1621
Hpy8I GTNNAC 5 cut(s) 90, 667, 804, 1005, 1540
HpyAV CCTTC 1 cut(s) 1124
HpyCH4III ACNGT 3 cut(s) 152, 388, 869
HpyCH4IV ACGT 3 cut(s) 905, 1007, 1329
HpyF10VI GCNNNNNNNGC 2 cut(s) 91, 106
HpyF3I CTNAG 6 cut(s) 144, 862, 960, 988, 999, 1037
HpySE526I ACGT 3 cut(s) 905, 1007, 1329
Hsp92II CATG 7 cut(s) 42, 52, 350, 573, 879, 903, 1624
Kzo9I GATC 8 cut(s) 130, 339, 580, 619, 681, 1033, 1385, 1709
LmnI GCTCC 3 cut(s) 106, 1133, 1202
Lsp1109I GCAGC 3 cut(s) 12, 121, 664
LweI GCATC 4 cut(s) 247, 458, 916, 985
MaeI CTAG 2 cut(s) 164, 1514
MaeII ACGT 3 cut(s) 905, 1007, 1329
MaeIII GTNAC 7 cut(s) 152, 191, 400, 510, 1046, 1406, 1477
MalI GATC 8 cut(s) 132, 341, 582, 621, 683, 1035, 1387, 1711
MboI GATC 8 cut(s) 130, 339, 580, 619, 681, 1033, 1385, 1709
MboII GAAGA 8 cut(s) 37, 50, 163, 349, 558, 1521, 1625, 1709
MfeI CAATTG 1 cut(s) 1042
MflI RGATCY 4 cut(s) 619, 681, 1033, 1385
MhlI GDGCHC 1 cut(s) 1207
MluCI AATT 9 cut(s) 561, 748, 1042, 1165, 1266, 1424, 1472, 1616, 1704
MmeI TCCRAC 2 cut(s) 297, 513
MnlI CCTC 7 cut(s) 146, 347, 699, 760, 974, 1433, 1513
MroXI GAANNNNTTC 2 cut(s) 562, 776
MseI TTAA 5 cut(s) 437, 641, 792, 1164, 1452
MslI CAYNNNNRTG 1 cut(s) 255
MspA1I CMGCKG 1 cut(s) 1398
MspI CCGG 5 cut(s) 180, 287, 393, 423, 637
MspR9I CCNGG 5 cut(s) 122, 180, 197, 465, 516
MunI CAATTG 1 cut(s) 1042
Mva1269I GAATGC 1 cut(s) 1686
MvaI CCWGG 4 cut(s) 122, 197, 465, 516
MwoI GCNNNNNNNGC 2 cut(s) 91, 106
NciI CCSGG 1 cut(s) 180
NdeII GATC 8 cut(s) 130, 339, 580, 619, 681, 1033, 1385, 1709
NlaIII CATG 7 cut(s) 42, 52, 350, 573, 879, 903, 1624
NlaIV GGNNCC 4 cut(s) 119, 710, 836, 1387
NmeAIII GCCGAG 1 cut(s) 1463
NmuCI GTSAC 5 cut(s) 152, 400, 1046, 1406, 1477
PagI TCATGA 1 cut(s) 1620
PaqCI CACCTGC 1 cut(s) 587
PcsI WCGNNNNNNNCGW 1 cut(s) 135
PctI GAATGC 1 cut(s) 1686
PdmI GAANNNNTTC 2 cut(s) 562, 776
PfeI GAWTC 1 cut(s) 296
PinAI ACCGGT 1 cut(s) 636
PkrI GCNGC 4 cut(s) 7, 27, 111, 654
PmaCI CACGTG 1 cut(s) 1330
PmlI CACGTG 1 cut(s) 1330
Ppu21I YACGTR 1 cut(s) 1330
PpuMI RGGWCCY 1 cut(s) 708
Psp5II RGGWCCY 1 cut(s) 708
Psp6I CCWGG 4 cut(s) 120, 195, 463, 514
PspCI CACGTG 1 cut(s) 1330
PspGI CCWGG 4 cut(s) 120, 195, 463, 514
PspN4I GGNNCC 4 cut(s) 119, 710, 836, 1387
PspPI GGNCC 7 cut(s) 118, 672, 708, 835, 956, 1088, 1532
PspPPI RGGWCCY 1 cut(s) 708
PstI CTGCAG 1 cut(s) 849
PsuI RGATCY 4 cut(s) 619, 681, 1033, 1385
RsaI GTAC 6 cut(s) 89, 776, 871, 904, 1225, 1295
RsaNI GTAC 6 cut(s) 88, 775, 870, 903, 1224, 1294
RseI CAYNNNNRTG 1 cut(s) 255
SaqAI TTAA 5 cut(s) 437, 641, 792, 1164, 1452
SatI GCNGC 4 cut(s) 6, 26, 110, 653
Sau3AI GATC 8 cut(s) 130, 339, 580, 619, 681, 1033, 1385, 1709
Sau96I GGNCC 7 cut(s) 118, 672, 708, 835, 956, 1088, 1532
ScaI AGTACT 1 cut(s) 776
ScrFI CCNGG 5 cut(s) 122, 180, 197, 465, 516
SduI GDGCHC 1 cut(s) 1207
SfaNI GCATC 4 cut(s) 247, 458, 916, 985
SfcI CTRYAG 2 cut(s) 591, 845
SinI GGWCC 6 cut(s) 118, 672, 708, 956, 1088, 1532
SmiMI CAYNNNNRTG 1 cut(s) 255
SmlI CTYRAG 1 cut(s) 95
SmoI CTYRAG 1 cut(s) 95
Sse9I AATT 9 cut(s) 561, 748, 1042, 1165, 1266, 1424, 1472, 1616, 1704
SsiI CCGC 3 cut(s) 260, 1349, 1398
SspMI CTAG 2 cut(s) 164, 1514
StyD4I CCNGG 5 cut(s) 120, 178, 195, 463, 514
TaaI ACNGT 3 cut(s) 152, 388, 869
TaiI ACGT 3 cut(s) 908, 1010, 1332
TaqI TCGA 6 cut(s) 188, 556, 741, 812, 851, 1708
TasI AATT 9 cut(s) 561, 748, 1042, 1165, 1266, 1424, 1472, 1616, 1704
TatI WGTACW 3 cut(s) 87, 774, 1223
TfiI GAWTC 1 cut(s) 296
Tru1I TTAA 5 cut(s) 437, 641, 792, 1164, 1452
Tru9I TTAA 5 cut(s) 437, 641, 792, 1164, 1452
TscAI CASTG 3 cut(s) 682, 936, 1284
TseFI GTSAC 5 cut(s) 152, 400, 1046, 1406, 1477
TseI GCWGC 4 cut(s) 5, 25, 109, 652
Tsp45I GTSAC 5 cut(s) 152, 400, 1046, 1406, 1477
TspDTI ATGAA 7 cut(s) 37, 350, 536, 558, 888, 1609, 1637
TspGWI ACGGA 2 cut(s) 269, 1101
TspRI CASTG 3 cut(s) 682, 936, 1284
VpaK11BI GGWCC 6 cut(s) 118, 672, 708, 956, 1088, 1532
XagI CCTNNNNNAGG 1 cut(s) 594
XapI RAATTY 3 cut(s) 1424, 1616, 1704
XmiI GTMKAC 1 cut(s) 666
XmnI GAANNNNTTC 2 cut(s) 562, 776
XspI CTAG 2 cut(s) 164, 1514
ZrmI AGTACT 1 cut(s) 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.