Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001889

Physical Location & Seq

Genomic Coordinates Forward (+)

35357393 .. 35362018

Gene Structure 4626 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0323400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGACGAGAATTCAGCACTGATCGAATCGATTCTGAGAGAGGAAGACGAGGCGGAGGCAGACAAATATGTAAAGAAGATGAGCAGCACGGCGCCAGTCCAAAACGGCGACGCTTACGCCTGGCAAACTGTTTCTTATCACAAGCGAAACCGACGACTTTCTCAGCCAATTCCGCCTGATTCTGTCGGCGATCCCTCCAACGGCGACGTCTTCCGCTCGATCGAGCTGCATTCCGAGGACCGCCGGAGGAGAATTCGACAGGCTCAAACGGATTCCCTTCCCGCTGTCCGATCCGAGCCGCATTCCGACGACGATAGCGATGCCGAGGTCGCCGCTGCCGCGGAAAATGGCGAGCCGAAGAAGGCCAAAGTGAAGAAGCCGAAGAAGCCGAAGCTGACTGTGGCCGAGGCCGCTTCCAAGATCGACGCGGCTCATCTCGGTGCTTTTCTCGCCGAGATAACGGAGGTGTATCAATCCCAACAAGACATACTGCTTTTGCGTCTGGCTGATTATTTCGGTCGAGCATTTGCGTCCGTCACTGCTGCTCAGTTTCCCTGGTTGAAGATATTCAAGGAATCCACTGTCTCAAAGATGGTTGACATCCCTCTTTCTCATATATCTGAAAATGTTTATAAGACATCAGTTGACTGGATCGGCCAGCGCTCCACTGAAGCCCTTGGGTCCTTCGTGTTGTGGTCACTAGATTGCATTCTTGCTGACCTTGCAAGTCATCAGGGAGCAGCAAAGGGATCCAAAAAGGTGGTCCAGCAACCTTCAAGATGTCAGGTTGCCATATTCGCGGTTTTAGCAATGGTGTTGCGAAAAAAACCTGATGTATTGTTTAGTCTATTTCCTGTGATGAGGGAAAGTTCGAAATATCAAGGCCAAGATAAGCTTCCGCTCACAGTGTGGTTGATTACGCAGGCCTCTCAAGGAGATCTGGTTGTTGGGTTGTACACATGGGTACATCTTCTCCTGCCTATATTGAGTAGCAAGTCAGGTTGTAATCCGCAGGCTAGAGACTTGATTTTGCAGTCAGTGGAAAGAATTTTATCGTCTCCAAAAGCTCGGCCTATTCTATTAAATGGTGCTGTTAGGAAAGGGGAGCACATAGTGCCACCATCAGCCCTTGATCTCTTGATGAGAGTTTCTTTTCCTTCACCTTCAGCGCGAGTTAAGGCAACTGAGAGATTTGAAGCCGTCTATCCAACCTTGAAAGAGATTGCCCTTGCTGGATCCCCAGGAAGCAAAACAGTGAGGCAGGTTGCACAGAAGACACTGAATTATTCAGTTAAAGCTGTTAAAGAAGGCATCCCCGATCTCTCTAAGGAGGCAACTGCTATATTTATCTGGTGTTTGACACAAAGTCCTGAATGTTACAAGCAATGGGACATGCTTTATCTGGACAATCTTGATGCAAGTGTTATTGTGCTGAAAAAGTTATCTGACGAGTGGAAGGAGCACTCCGTTAAACATGCCTCTCTTGACCCCTTGAGGGAAACCTTGAAGAGTTTCAGGGAGAAGAATGAAAAAGCATTGGCAAAAGGAGATGATTTGGTGCGCCATTCGTTGTTGAAGGATGCAGATAAATATTGCAAGCTGATTTTAGGACGGTCATCTCAAGGCCGTGGATGCATGAAAAGCATGGTTCTGGTGTCTGTTGCCCTTGCTATGGGTGCTGCTATCATGTCCCAAAACATACAACCCGAAGACCTCAAGAAACTTGCAGCCATGTTTAACTTCCCCCTGACTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0008238 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0016787 GO:0017171 GO:0019538 GO:0022607 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0051259 GO:0051260 GO:0051262 GO:0051289 GO:0065003 GO:0070008 GO:0070009 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PD40 Peptidase_S9

Protein Analysis

585

Amino Acids

64.82

Weight (kDa)

8.99

Isoelectric Point (pI)

47.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TMEM214	PF10151	89 - 567	9e-25	TMEM214, C-terminal, caspase 4 activator

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001889)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18470
fragaria_vesca	FvH4_1g04840 FvH4_4g02170
malus_domestica	MD02G1047300.v1.1 MD02G1047500.v1.1 MD02G1047600.v1.1 MD15G1186100.v1.1
prunus_persica	Prupe.7G230600_v2.0.a1 Prupe.7G230700_v2.0.a1
pyrus_communis	pycom02g03950 pycom02g03960 pycom02g03970 pycom02g03980 pycom15g16680
rosa_chinensis	RchiOBHm_Chr2g0090491 RchiOBHm_Chr4g0389481 RchiOBHm_Chr4g0389511
rosa_laevigata	RLG00000009978 RLG00000009979 RLG00000016118
rosa_multiflora	Rmu_co8294841.1_g000001 Rmu_co8421003.1_g000001 Rmu_sc0002498.1_g000012 Rmu_sc0002498.1_g000014 Rmu_sc0004514.1_g000025 Rmu_sc0015016.1_g000001 Rmu_sc0016342.1_g000001 Rmu_sc0023528.1_g000001
rosa_roxburghii	Rroxscaffold_2G00151090 Rroxscaffold_5G00335480
rosa_rugosa	Rorug02G0008500 Rorug03G0323400 Rorug03G0323500 Rorug03G0323600
rosa_samantha	Rh2AG053900 Rh2BG053400 Rh2CG055500 Rh2DG054100 Rh4AG027900 Rh4AG028000 Rh4BG021100 Rh4CG029900 Rh4DG021500
rosa_wichuraiana	Rw2G004310 Rw4G002030 Rw4G002070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	633
AatII	GACGTC	1 cut(s)	210
Acc36I	ACCTGC	1 cut(s)	1252
AccB1I	GGYRCC	1 cut(s)	91
AccBSI	CCGCTC	2 cut(s)	216, 901
AccII	CGCG	4 cut(s)	341, 428, 800, 1171
AclWI	GGATC	7 cut(s)	185, 285, 659, 744, 757, 1230, 1243
AcoI	YGGCCR	2 cut(s)	402, 655
AcsI	RAATTY	3 cut(s)	10, 252, 1047
AcuI	CTGAAG	2 cut(s)	690, 1149
AcyI	GRCGYC	2 cut(s)	92, 207
AdeI	CACNNNGTG	2 cut(s)	909, 1114
AfaI	GTAC	2 cut(s)	956, 966
AfeI	AGCGCT	1 cut(s)	662
AfiI	CCNNNNNNNGG	3 cut(s)	200, 1495, 1672
AgsI	TTSAA	7 cut(s)	562, 571, 777, 1196, 1216, 1507, 1576
AhdI	GACNNNNNGTC	1 cut(s)	1365
AjnI	CCWGG	3 cut(s)	119, 554, 1240
AjuI	GAANNNNNNNTTGG	2 cut(s)	879, 911
AluBI	AGCT	6 cut(s)	226, 394, 895, 1067, 1298, 1600
AluI	AGCT	6 cut(s)	226, 394, 895, 1067, 1298, 1600
Alw21I	GWGCWC	2 cut(s)	1110, 1464
Alw26I	GTCTC	3 cut(s)	589, 1014, 1062
AlwI	GGATC	7 cut(s)	185, 285, 659, 744, 757, 1230, 1243
Aor51HI	AGCGCT	1 cut(s)	662
AoxI	GGCC	8 cut(s)	363, 402, 408, 655, 883, 924, 1070, 1624
ApeKI	GCWGC	7 cut(s)	84, 226, 335, 542, 740, 1679, 1727
ApoI	RAATTY	3 cut(s)	10, 252, 1047
ArsI	GACNNNNNNTTYG	2 cut(s)	747, 779
Asp700I	GAANNNNTTC	3 cut(s)	30, 566, 1511
AspLEI	GCGC	4 cut(s)	94, 663, 1171, 1563
AspS9I	GGNCC	3 cut(s)	238, 681, 763
AsuHPI	GGTGA	1 cut(s)	1152
AsuII	TTCGAA	1 cut(s)	872
AvaII	GGWCC	3 cut(s)	238, 681, 763
BamHI	GGATCC	2 cut(s)	749, 1235
BanI	GGYRCC	1 cut(s)	91
BbsI	GAAGAC	4 cut(s)	51, 202, 1280, 1716
Bbv12I	GWGCWC	2 cut(s)	1110, 1464
BbvI	GCAGC	7 cut(s)	96, 213, 322, 529, 752, 1666, 1739
BccI	CCATC	2 cut(s)	586, 1129
BceAI	ACGGC	5 cut(s)	105, 121, 217, 1184, 1611
BcgI	CGANNNNNNTGC	4 cut(s)	208, 242, 302, 336
BciT130I	CCWGG	3 cut(s)	121, 556, 1242
BcoDI	GTCTC	3 cut(s)	589, 1014, 1062
BfaI	CTAG	2 cut(s)	701, 1017
BfoI	RGCGCY	2 cut(s)	95, 664
BfuAI	ACCTGC	1 cut(s)	1252
BglII	AGATCT	1 cut(s)	937
Bme1390I	CCNGG	3 cut(s)	121, 556, 1242
Bme18I	GGWCC	3 cut(s)	238, 681, 763
BmeRI	GACNNNNNGTC	1 cut(s)	1365
BmgT120I	GGNCC	3 cut(s)	238, 681, 763
BmiI	GGNNCC	4 cut(s)	93, 682, 751, 1237
BmrFI	CCNGG	3 cut(s)	121, 556, 1242
BmsI	GCATC	5 cut(s)	310, 1320, 1405, 1570, 1622
BpiI	GAAGAC	4 cut(s)	51, 202, 1280, 1716
Bpu14I	TTCGAA	1 cut(s)	872
BpuEI	CTTGAG	4 cut(s)	915, 1513, 1605, 1700
Bsa29I	ATCGAT	1 cut(s)	29
BsaHI	GRCGYC	2 cut(s)	92, 207
BsaJI	CCNNGG	8 cut(s)	234, 324, 339, 405, 554, 676, 1240, 1627
BsaXI	ACNNNNNCTCC	4 cut(s)	927, 957, 957, 987
Bsc4I	CCNNNNNNNGG	3 cut(s)	200, 1495, 1672
Bse1I	ACTGG	2 cut(s)	95, 653
Bse3DI	GCAATG	2 cut(s)	816, 1391
BseBI	CCWGG	3 cut(s)	121, 556, 1242
BseCI	ATCGAT	1 cut(s)	29
BseDI	CCNNGG	8 cut(s)	234, 324, 339, 405, 554, 676, 1240, 1627
BseGI	GGATG	4 cut(s)	600, 1311, 1585, 1637
BseLI	CCNNNNNNNGG	3 cut(s)	200, 1495, 1672
BseMI	GCAATG	2 cut(s)	816, 1391
BseMII	CTCAG	4 cut(s)	26, 176, 560, 1176
BseNI	ACTGG	2 cut(s)	95, 653
BseRI	GAGGAG	1 cut(s)	262
BseXI	GCAGC	7 cut(s)	96, 213, 322, 529, 752, 1666, 1739
Bsh1236I	CGCG	4 cut(s)	341, 428, 800, 1171
Bsh1285I	CGRYCG	2 cut(s)	222, 520
BshFI	GGCC	8 cut(s)	365, 404, 410, 657, 885, 926, 1072, 1626
BshNI	GGYRCC	1 cut(s)	91
BshVI	ATCGAT	1 cut(s)	29
BsiEI	CGRYCG	2 cut(s)	222, 520
BsiHKAI	GWGCWC	2 cut(s)	1110, 1464
BsiSI	CCGG	1 cut(s)	244
BslFI	GGGAC	2 cut(s)	1403, 1675
BslI	CCNNNNNNNGG	3 cut(s)	200, 1495, 1672
BsmAI	GTCTC	3 cut(s)	589, 1014, 1062
BsmBI	CGTCTC	1 cut(s)	1062
BsmFI	GGGAC	2 cut(s)	1403, 1675
BsmI	GAATGC	3 cut(s)	229, 301, 708
BsnI	GGCC	8 cut(s)	365, 404, 410, 657, 885, 926, 1072, 1626
Bsp119I	TTCGAA	1 cut(s)	872
Bsp1286I	GDGCHC	2 cut(s)	1110, 1464
Bsp1407I	TGTACA	1 cut(s)	954
BspANI	GGCC	8 cut(s)	365, 404, 410, 657, 885, 926, 1072, 1626
BspCNI	CTCAG	4 cut(s)	27, 175, 559, 1177
BspDI	ATCGAT	1 cut(s)	29
BspFNI	CGCG	4 cut(s)	341, 428, 800, 1171
BspLI	GGNNCC	4 cut(s)	93, 682, 751, 1237
BspMI	ACCTGC	1 cut(s)	1252
BspPI	GGATC	7 cut(s)	185, 285, 659, 744, 757, 1230, 1243
BspT104I	TTCGAA	1 cut(s)	872
BspT107I	GGYRCC	1 cut(s)	91
BsrBI	CCGCTC	2 cut(s)	216, 901
BsrDI	GCAATG	2 cut(s)	816, 1391
BsrGI	TGTACA	1 cut(s)	954
BsrI	ACTGG	2 cut(s)	95, 653
BssECI	CCNNGG	8 cut(s)	234, 324, 339, 405, 554, 676, 1240, 1627
BssNI	GRCGYC	2 cut(s)	92, 207
BssT1I	CCWWGG	1 cut(s)	676
Bst2UI	CCWGG	3 cut(s)	121, 556, 1242
Bst4CI	ACNGT	6 cut(s)	130, 400, 583, 907, 1255, 1614
Bst6I	CTCTTC	1 cut(s)	1502
BstACI	GRCGYC	2 cut(s)	92, 207
BstAPI	GCANNNNNTGC	1 cut(s)	1114
BstAUI	TGTACA	1 cut(s)	954
BstBI	TTCGAA	1 cut(s)	872
BstC8I	GCNNGC	5 cut(s)	353, 659, 924, 1014, 1598
BstDEI	CTNAG	5 cut(s)	35, 162, 546, 1185, 1326
BstDSI	CCRYGG	2 cut(s)	339, 1627
BstF5I	GGATG	4 cut(s)	600, 1311, 1585, 1637
BstFNI	CGCG	4 cut(s)	341, 428, 800, 1171
BstH2I	RGCGCY	2 cut(s)	95, 664
BstHHI	GCGC	4 cut(s)	94, 663, 1171, 1563
BstMAI	GTCTC	3 cut(s)	589, 1014, 1062
BstMCI	CGRYCG	2 cut(s)	222, 520
BstNI	CCWGG	3 cut(s)	121, 556, 1242
BstNSI	RCATGY	2 cut(s)	1396, 1478
BstSCI	CCNGG	3 cut(s)	119, 554, 1240
BstUI	CGCG	4 cut(s)	341, 428, 800, 1171
BstV1I	GCAGC	7 cut(s)	96, 213, 322, 529, 752, 1666, 1739
BstV2I	GAAGAC	4 cut(s)	51, 202, 1280, 1716
BstX2I	RGATCY	3 cut(s)	749, 937, 1235
BstXI	CCANNNNNNTGG	1 cut(s)	760
BstYI	RGATCY	3 cut(s)	749, 937, 1235
Bsu15I	ATCGAT	1 cut(s)	29
BsuRI	GGCC	8 cut(s)	365, 404, 410, 657, 885, 926, 1072, 1626
BsuTUI	ATCGAT	1 cut(s)	29
BtgI	CCRYGG	2 cut(s)	339, 1627
BtgZI	GCGATG	1 cut(s)	333
BtsCI	GGATG	4 cut(s)	600, 1311, 1585, 1637
BtsI	GCAGTG	1 cut(s)	537
BtsIMutI	CAGTG	8 cut(s)	17, 537, 579, 666, 912, 1044, 1260, 1277
BveI	ACCTGC	1 cut(s)	1252
Cac8I	GCNNGC	5 cut(s)	353, 659, 924, 1014, 1598
CfoI	GCGC	4 cut(s)	94, 663, 1171, 1563
Cfr13I	GGNCC	3 cut(s)	238, 681, 763
Cfr42I	CCGCGG	1 cut(s)	342
ClaI	ATCGAT	1 cut(s)	29
CseI	GACGC	4 cut(s)	119, 434, 488, 519
Csp6I	GTAC	2 cut(s)	955, 965
CviAII	CATG	7 cut(s)	960, 1393, 1475, 1636, 1645, 1687, 1732
CviQI	GTAC	2 cut(s)	955, 965
DdeI	CTNAG	5 cut(s)	35, 162, 546, 1185, 1326
DinI	GGCGCC	1 cut(s)	93
DraIII	CACNNNGTG	2 cut(s)	909, 1114
DriI	GACNNNNNGTC	1 cut(s)	1365
EaeI	YGGCCR	2 cut(s)	402, 655
Eam1104I	CTCTTC	1 cut(s)	1502
Eam1105I	GACNNNNNGTC	1 cut(s)	1365
EarI	CTCTTC	1 cut(s)	1502
EciI	GGCGGA	2 cut(s)	68, 162
Eco130I	CCWWGG	1 cut(s)	676
Eco147I	AGGCCT	1 cut(s)	926
Eco47I	GGWCC	3 cut(s)	238, 681, 763
Eco47III	AGCGCT	1 cut(s)	662
Eco57I	CTGAAG	2 cut(s)	690, 1149
EcoO109I	RGGNCCY	1 cut(s)	681
EcoRI	GAATTC	2 cut(s)	10, 252
EcoRII	CCWGG	3 cut(s)	119, 554, 1240
EcoT14I	CCWWGG	1 cut(s)	676
EcoT22I	ATGCAT	1 cut(s)	1637
EgeI	GGCGCC	1 cut(s)	93
EheI	GGCGCC	1 cut(s)	93
ErhI	CCWWGG	1 cut(s)	676
Esp3I	CGTCTC	1 cut(s)	1062
FaeI	CATG	7 cut(s)	963, 1396, 1478, 1639, 1648, 1690, 1735
FalI	AAGNNNNNCTT	2 cut(s)	879, 911
FaqI	GGGAC	2 cut(s)	1403, 1675
FatI	CATG	7 cut(s)	959, 1392, 1474, 1635, 1644, 1686, 1731
FauI	CCCGC	1 cut(s)	289
FokI	GGATG	4 cut(s)	587, 1298, 1592, 1644
FspBI	CTAG	2 cut(s)	701, 1017
GlaI	GCGC	4 cut(s)	93, 662, 1170, 1562
HaeII	RGCGCY	2 cut(s)	95, 664
HaeIII	GGCC	8 cut(s)	365, 404, 410, 657, 885, 926, 1072, 1626
HapII	CCGG	1 cut(s)	244
HgaI	GACGC	4 cut(s)	119, 434, 488, 519
HhaI	GCGC	4 cut(s)	94, 663, 1171, 1563
Hin1I	GRCGYC	2 cut(s)	92, 207
Hin1II	CATG	7 cut(s)	963, 1396, 1478, 1639, 1648, 1690, 1735
Hin6I	GCGC	4 cut(s)	92, 661, 1169, 1561
HinP1I	GCGC	4 cut(s)	92, 661, 1169, 1561
HincII	GTYRAC	2 cut(s)	598, 646
HindII	GTYRAC	2 cut(s)	598, 646
HindIII	AAGCTT	1 cut(s)	893
HinfI	GANTC	6 cut(s)	26, 31, 179, 272, 575, 1750
HpaII	CCGG	1 cut(s)	244
HphI	GGTGA	1 cut(s)	1152
Hpy166II	GTNNAC	3 cut(s)	598, 646, 957
Hpy188I	TCNGA	7 cut(s)	36, 235, 290, 295, 307, 622, 1447
Hpy188III	TCNNGA	7 cut(s)	777, 1138, 1370, 1403, 1412, 1484, 1717
Hpy8I	GTNNAC	3 cut(s)	598, 646, 957
Hpy99I	CGWCG	6 cut(s)	113, 156, 209, 311, 314, 428
HpyAV	CCTTC	9 cut(s)	287, 355, 694, 783, 1167, 1173, 1301, 1450, 1570
HpyCH4III	ACNGT	6 cut(s)	130, 400, 583, 907, 1255, 1614
HpyCH4IV	ACGT	1 cut(s)	207
HpyF3I	CTNAG	5 cut(s)	35, 162, 546, 1185, 1326
HpySE526I	ACGT	1 cut(s)	207
Hsp92I	GRCGYC	2 cut(s)	92, 207
Hsp92II	CATG	7 cut(s)	963, 1396, 1478, 1639, 1648, 1690, 1735
HspAI	GCGC	4 cut(s)	92, 661, 1169, 1561
KasI	GGCGCC	1 cut(s)	91
KspI	CCGCGG	1 cut(s)	342
LmnI	GCTCC	4 cut(s)	668, 737, 1105, 1459
Lsp1109I	GCAGC	7 cut(s)	96, 213, 322, 529, 752, 1666, 1739
LweI	GCATC	5 cut(s)	310, 1320, 1405, 1570, 1622
MaeI	CTAG	2 cut(s)	701, 1017
MaeII	ACGT	1 cut(s)	207
MaeIII	GTNAC	3 cut(s)	535, 696, 1376
MbiI	CCGCTC	2 cut(s)	216, 901
MflI	RGATCY	3 cut(s)	749, 937, 1235
MhlI	GDGCHC	2 cut(s)	1110, 1464
MluCI	AATT	5 cut(s)	10, 168, 252, 1047, 1282
Mly113I	GGCGCC	1 cut(s)	92
MlyI	GAGTC	1 cut(s)	1744
MmeI	TCCRAC	3 cut(s)	222, 330, 1232
Mph1103I	ATGCAT	1 cut(s)	1637
MroXI	GAANNNNTTC	3 cut(s)	30, 566, 1511
MseI	TTAA	6 cut(s)	1082, 1176, 1293, 1302, 1470, 1737
MslI	CAYNNNNRTG	1 cut(s)	438
MspA1I	CMGCKG	3 cut(s)	284, 335, 341
MspI	CCGG	1 cut(s)	244
MspR9I	CCNGG	3 cut(s)	121, 556, 1242
Mva1269I	GAATGC	3 cut(s)	229, 301, 708
MvaI	CCWGG	3 cut(s)	121, 556, 1242
MvnI	CGCG	4 cut(s)	341, 428, 800, 1171
NarI	GGCGCC	1 cut(s)	92
NlaIII	CATG	7 cut(s)	963, 1396, 1478, 1639, 1648, 1690, 1735
NlaIV	GGNNCC	4 cut(s)	93, 682, 751, 1237
NmeAIII	GCCGAG	4 cut(s)	349, 430, 478, 1048
NmuCI	GTSAC	2 cut(s)	535, 696
NsiI	ATGCAT	1 cut(s)	1637
NspI	RCATGY	2 cut(s)	1396, 1478
NspV	TTCGAA	1 cut(s)	872
PceI	AGGCCT	1 cut(s)	926
PcsI	WCGNNNNNNNCGW	1 cut(s)	315
PctI	GAATGC	3 cut(s)	229, 301, 708
PdmI	GAANNNNTTC	3 cut(s)	30, 566, 1511
PfeI	GAWTC	5 cut(s)	26, 31, 179, 272, 575
Ple19I	CGATCG	1 cut(s)	222
PleI	GAGTC	1 cut(s)	1744
PluTI	GGCGCC	1 cut(s)	95
PpsI	GAGTC	1 cut(s)	1744
PpuMI	RGGWCCY	1 cut(s)	681
PsiI	TTATAA	1 cut(s)	633
Psp5II	RGGWCCY	1 cut(s)	681
Psp6I	CCWGG	3 cut(s)	119, 554, 1240
PspGI	CCWGG	3 cut(s)	119, 554, 1240
PspN4I	GGNNCC	4 cut(s)	93, 682, 751, 1237
PspPI	GGNCC	3 cut(s)	238, 681, 763
PspPPI	RGGWCCY	1 cut(s)	681
PsuI	RGATCY	3 cut(s)	749, 937, 1235
PvuI	CGATCG	1 cut(s)	222
RsaI	GTAC	2 cut(s)	956, 966
RsaNI	GTAC	2 cut(s)	955, 965
RseI	CAYNNNNRTG	1 cut(s)	438
SacII	CCGCGG	1 cut(s)	342
SaqAI	TTAA	6 cut(s)	1082, 1176, 1293, 1302, 1470, 1737
Sau96I	GGNCC	3 cut(s)	238, 681, 763
SchI	GAGTC	1 cut(s)	1744
ScrFI	CCNGG	3 cut(s)	121, 556, 1242
SduI	GDGCHC	2 cut(s)	1110, 1464
SfaNI	GCATC	5 cut(s)	310, 1320, 1405, 1570, 1622
SfoI	GGCGCC	1 cut(s)	93
Sfr303I	CCGCGG	1 cut(s)	342
SfuI	TTCGAA	1 cut(s)	872
SgrBI	CCGCGG	1 cut(s)	342
SinI	GGWCC	3 cut(s)	238, 681, 763
SmiMI	CAYNNNNRTG	1 cut(s)	438
SmlI	CTYRAG	4 cut(s)	930, 1492, 1620, 1715
SmoI	CTYRAG	4 cut(s)	930, 1492, 1620, 1715
Sse9I	AATT	5 cut(s)	10, 168, 252, 1047, 1282
SseBI	AGGCCT	1 cut(s)	926
SspDI	GGCGCC	1 cut(s)	91
SspI	AATATT	1 cut(s)	1592
SspMI	CTAG	2 cut(s)	701, 1017
StuI	AGGCCT	1 cut(s)	926
StyD4I	CCNGG	3 cut(s)	119, 554, 1240
StyI	CCWWGG	1 cut(s)	676
TaaI	ACNGT	6 cut(s)	130, 400, 583, 907, 1255, 1614
TaiI	ACGT	1 cut(s)	210
TaqI	TCGA	8 cut(s)	24, 29, 218, 222, 256, 423, 520, 872
TaqII	GACCGA	1 cut(s)	506
TasI	AATT	5 cut(s)	10, 168, 252, 1047, 1282
TatI	WGTACW	1 cut(s)	954
TauI	GCSGC	5 cut(s)	301, 335, 341, 413, 431
TfiI	GAWTC	5 cut(s)	26, 31, 179, 272, 575
Tru1I	TTAA	6 cut(s)	1082, 1176, 1293, 1302, 1470, 1737
Tru9I	TTAA	6 cut(s)	1082, 1176, 1293, 1302, 1470, 1737
TscAI	CASTG	8 cut(s)	24, 544, 586, 673, 912, 1044, 1260, 1284
TseFI	GTSAC	2 cut(s)	535, 696
TseI	GCWGC	7 cut(s)	84, 226, 335, 542, 740, 1679, 1727
Tsp45I	GTSAC	2 cut(s)	535, 696
TspDTI	ATGAA	2 cut(s)	1542, 1652
TspGWI	ACGGA	4 cut(s)	284, 476, 523, 1456
TspRI	CASTG	8 cut(s)	24, 544, 586, 673, 912, 1044, 1260, 1284
VpaK11BI	GGWCC	3 cut(s)	238, 681, 763
XapI	RAATTY	3 cut(s)	10, 252, 1047
XceI	RCATGY	2 cut(s)	1396, 1478
XmnI	GAANNNNTTC	3 cut(s)	30, 566, 1511
XspI	CTAG	2 cut(s)	701, 1017
ZraI	GACGTC	1 cut(s)	208
Zsp2I	ATGCAT	1 cut(s)	1637

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.