cysteine--tRNA ligase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G56300 AT3G56300 AT3G56300 |
| fragaria_vesca | FvH4_2g17241 FvH4_3g19570 FvH4_3g19580 FvH4_3g19590 FvH4_4g27030 FvH4_4g27030 FvH4_4g27030 |
| malus_domestica | MD04G1098100.v1.1 MD13G1039300.v1.1 MD16G1040200.v1.1 MD16G1076600.v1.1 MD17G1183300.v1.1 |
| prunus_persica | Prupe.1G313900_v2.0.a1 |
| pyrus_communis | pycom04g11630 pycom13g03380 pycom16g03490 |
| rosa_chinensis | RchiOBHm_Chr1g0323701 RchiOBHm_Chr1g0362331 RchiOBHm_Chr2g0088831 RchiOBHm_Chr4g0434831 RchiOBHm_Chr5g0002801 RchiOBHm_Chr5g0002811 |
| rosa_laevigata | RLG00000006644 RLG00000031061 |
| rosa_multiflora | Rmu_sc0000633.1_g000010 Rmu_sc0013603.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00073040 Rroxscaffold_5G00376040 |
| rosa_rugosa | Rorug04G0279300 Rorug04G0279300 Rorug04G0399800 |
| rosa_samantha | Rh1DG061300 Rh3CG112600 Rh4AG335300 Rh4BG343800 Rh4CG358200 Rh4DG337700 Rh5AG022600 Rh5BG025300 Rh5CG025100 Rh5DG023700 |
| rosa_wichuraiana | Rw4G029240 Rw5G002100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 75 |
| AciI | CCGC | 2 cut(s) | 42, 78 |
| AcuI | CTGAAG | 1 cut(s) | 245 |
| AfaI | GTAC | 2 cut(s) | 26, 136 |
| AfeI | AGCGCT | 1 cut(s) | 174 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 144 |
| AluBI | AGCT | 1 cut(s) | 163 |
| AluI | AGCT | 1 cut(s) | 163 |
| Alw21I | GWGCWC | 1 cut(s) | 152 |
| Aor51HI | AGCGCT | 1 cut(s) | 174 |
| AspLEI | GCGC | 2 cut(s) | 77, 175 |
| Bbv12I | GWGCWC | 1 cut(s) | 152 |
| BccI | CCATC | 2 cut(s) | 66, 112 |
| BceAI | ACGGC | 1 cut(s) | 65 |
| BfoI | RGCGCY | 1 cut(s) | 176 |
| BisI | GCNGC | 1 cut(s) | 78 |
| BlsI | GCNGC | 1 cut(s) | 79 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BsaJI | CCNNGG | 1 cut(s) | 138 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 144 |
| BseDI | CCNNGG | 1 cut(s) | 138 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BseMII | CTCAG | 3 cut(s) | 67, 76, 264 |
| BseYI | CCCAGC | 1 cut(s) | 8 |
| Bsh1236I | CGCG | 1 cut(s) | 75 |
| BsiHKAI | GWGCWC | 1 cut(s) | 152 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BsmI | GAATGC | 1 cut(s) | 293 |
| Bsp1286I | GDGCHC | 1 cut(s) | 152 |
| Bsp143I | GATC | 1 cut(s) | 49 |
| BspACI | CCGC | 2 cut(s) | 42, 78 |
| BspCNI | CTCAG | 3 cut(s) | 66, 75, 263 |
| BspFNI | CGCG | 1 cut(s) | 75 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BssECI | CCNNGG | 1 cut(s) | 138 |
| BssMI | GATC | 1 cut(s) | 49 |
| BssT1I | CCWWGG | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 1 cut(s) | 73 |
| BstDEI | CTNAG | 4 cut(s) | 53, 62, 167, 250 |
| BstFNI | CGCG | 1 cut(s) | 75 |
| BstH2I | RGCGCY | 1 cut(s) | 176 |
| BstHHI | GCGC | 2 cut(s) | 77, 175 |
| BstKTI | GATC | 1 cut(s) | 52 |
| BstMBI | GATC | 1 cut(s) | 49 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 18, 63, 72, 77 |
| BstNSI | RCATGY | 1 cut(s) | 25 |
| BstUI | CGCG | 1 cut(s) | 75 |
| BtsI | GCAGTG | 1 cut(s) | 233 |
| BtsIMutI | CAGTG | 1 cut(s) | 233 |
| Cac8I | GCNNGC | 1 cut(s) | 73 |
| CfoI | GCGC | 2 cut(s) | 77, 175 |
| Csp6I | GTAC | 2 cut(s) | 25, 135 |
| CviAII | CATG | 3 cut(s) | 22, 68, 125 |
| CviJI | RGCY | 4 cut(s) | 57, 66, 143, 163 |
| CviKI_1 | RGCY | 4 cut(s) | 57, 66, 143, 163 |
| CviQI | GTAC | 2 cut(s) | 25, 135 |
| DdeI | CTNAG | 4 cut(s) | 53, 62, 167, 250 |
| DpnI | GATC | 1 cut(s) | 51 |
| DpnII | GATC | 1 cut(s) | 49 |
| Eco130I | CCWWGG | 1 cut(s) | 138 |
| Eco47III | AGCGCT | 1 cut(s) | 174 |
| Eco57I | CTGAAG | 1 cut(s) | 245 |
| EcoT14I | CCWWGG | 1 cut(s) | 138 |
| ErhI | CCWWGG | 1 cut(s) | 138 |
| FaeI | CATG | 3 cut(s) | 25, 71, 128 |
| FaiI | YATR | 5 cut(s) | 23, 33, 69, 126, 247 |
| FatI | CATG | 3 cut(s) | 21, 67, 124 |
| Fnu4HI | GCNGC | 1 cut(s) | 78 |
| Fsp4HI | GCNGC | 1 cut(s) | 78 |
| GlaI | GCGC | 2 cut(s) | 76, 174 |
| GluI | GCNGC | 1 cut(s) | 78 |
| GsaI | CCCAGC | 1 cut(s) | 12 |
| HaeII | RGCGCY | 1 cut(s) | 176 |
| HhaI | GCGC | 2 cut(s) | 77, 175 |
| Hin1II | CATG | 3 cut(s) | 25, 71, 128 |
| Hin6I | GCGC | 2 cut(s) | 75, 173 |
| HinP1I | GCGC | 2 cut(s) | 75, 173 |
| HinfI | GANTC | 1 cut(s) | 268 |
| Hpy188I | TCNGA | 2 cut(s) | 104, 156 |
| Hpy188III | TCNNGA | 1 cut(s) | 252 |
| HpyCH4V | TGCA | 1 cut(s) | 124 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 18, 63, 72, 77 |
| HpyF3I | CTNAG | 4 cut(s) | 53, 62, 167, 250 |
| Hsp92II | CATG | 3 cut(s) | 25, 71, 128 |
| HspAI | GCGC | 2 cut(s) | 75, 173 |
| Kzo9I | GATC | 1 cut(s) | 49 |
| LmnI | GCTCC | 3 cut(s) | 129, 147, 168 |
| LpnPI | CCDG | 4 cut(s) | 22, 58, 184, 237 |
| MalI | GATC | 1 cut(s) | 51 |
| MboI | GATC | 1 cut(s) | 49 |
| MboII | GAAGA | 1 cut(s) | 238 |
| MhlI | GDGCHC | 1 cut(s) | 152 |
| MluCI | AATT | 3 cut(s) | 36, 85, 279 |
| MlyI | GAGTC | 1 cut(s) | 262 |
| MnlI | CCTC | 2 cut(s) | 7, 258 |
| Mva1269I | GAATGC | 1 cut(s) | 293 |
| MvnI | CGCG | 1 cut(s) | 75 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 18, 63, 72, 77 |
| NdeII | GATC | 1 cut(s) | 49 |
| NlaIII | CATG | 3 cut(s) | 25, 71, 128 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 25 |
| PctI | GAATGC | 1 cut(s) | 293 |
| PkrI | GCNGC | 1 cut(s) | 79 |
| PleI | GAGTC | 1 cut(s) | 262 |
| PpsI | GAGTC | 1 cut(s) | 262 |
| PspFI | CCCAGC | 1 cut(s) | 8 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| RsaI | GTAC | 2 cut(s) | 26, 136 |
| RsaNI | GTAC | 2 cut(s) | 25, 135 |
| SatI | GCNGC | 1 cut(s) | 78 |
| Sau3AI | GATC | 1 cut(s) | 49 |
| SchI | GAGTC | 1 cut(s) | 262 |
| SduI | GDGCHC | 1 cut(s) | 152 |
| SetI | ASST | 4 cut(s) | 18, 140, 165, 246 |
| Sse9I | AATT | 3 cut(s) | 36, 85, 279 |
| SsiI | CCGC | 2 cut(s) | 42, 78 |
| StyI | CCWWGG | 1 cut(s) | 138 |
| TasI | AATT | 3 cut(s) | 36, 85, 279 |
| TatI | WGTACW | 1 cut(s) | 24 |
| TauI | GCSGC | 1 cut(s) | 80 |
| TscAI | CASTG | 1 cut(s) | 240 |
| TspRI | CASTG | 1 cut(s) | 240 |
| XceI | RCATGY | 1 cut(s) | 25 |