Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001861

Physical Location & Seq

Genomic Coordinates Forward (+)

94040504 .. 94043539

Gene Structure 3036 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00073040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGGGATGTATTCTTTGCTGTTGAGAAATTCCCAAAATTATGGGCAATTATCTGGACAAAATTTGGAACATATTAGGGCGGGTGAACGAGTTGATGTTGATTTAAGAAAGCACAATCCTGCAGATTTTGCATTGTGGAAGTCTGCAAAGCCTGGAGAGTCAGAATGGAAAAGCCCTTGGGGACCAGGAAGGCCGGGGTGGCACACTGAATGCAGTGCCATGAGTGCCCGTTATCTTACATACAAGTTTGATATTCATGGTGGTGGTATTGACTTGATTTTTCCGCATCATGAAAACGAGAACGCTCAAAGTGGTGCTGCATGCCAGGAGGCTTGTGTCAGTTATTGGTTGCACAACGGTCATGTTACTAAGGATAATATTGCTGAAATAAACCACCCACTGTCTTTGAGACACTTCTTGTTAAGTGCGCATTATAGATCTCCACTCAATTACAGTGAATCCCAGCTGGATAGTGCATCAGCTGCTGTCTATTACATATATCAGACTTTGCAAGAGTGTGAAGATGCTTTATCTCCATTTCAAGAAGACGTCCAGAAGGAAGGCACAGAACCAAATGGTAGAACAGTTAAAATTCCTCAAGCTGCCCAAGTTAAGCTACGGAATGAGTTTAAGACTAAAATGTCTGATGACTTGAAAACAGCACCCATATTGACTGGTGCTTTGCAAGATGCCTTGAGGTCGATAAACAGTTTTGTGCCTGATCTTAAGGTAAACATTTGGAACCAGTTCCAGCATCCCTCACTTTTTTCGTGCTGTCTCTCTCGCTCTCTCTCAATGTGTATAATAGAAAGCATGTTCTGTACTTTCCAGAAGAAGCAGCAGAAGCAAAAACAATCATCCGTAATCCAGGCCCTAATTGAAACAACAAGAGAAGTTAGAAGAGTTCTGGGCATTTTGGGTCTGCTATCCTCCGATACATACTCTGAGGTTTTGCAGGAATTGAAAAGGAAAGCTTTGAACAGGGCAGGACATAAGTGCTGCTTGCAATTGAAGAAAGAACAGCAGCAAGACAAAAACAAGAATATGCAAGGAGTGATCAGATCAGAGCAGAAATGGAGAGAAAGGGGATTGCAATCATGGATGTGGCCAAGGGGAGAATCTGGAGACCTTGTGTCCCAAAAGAACAAGAACAAAAAACACTGCCAAACGAGGAAGAATAGAAGGCATCACCTGTTGAACAAAAAGAGCAGCCTGTGTCGACTTGATGATGTGCCTTTGGCAGGAGGCCAGAAGAATTGGGCTTGTGGGGGCATGAATGAACATATTGCATTAACATTTCAGAGAACTGATGCAGTAATCCAGATACCGAACACCAAGCACTGTGTTGAAGGCAGAGAAGGGGGCATGAATGAACATATTGCATTAACATTTCAGAGAACTGATGCAGTAATCCAGATACCGAACACCAAGCACTGTGTTGAAGGCAGAGAAGGGATTATAATGCATATGCATTTGAAAGATTTCAACAAGCCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004812 GO:0004817 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006423 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0017076 GO:0019538 GO:0019752 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034645 GO:0034660 GO:0035639 GO:0036094 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:0090304 GO:0097159 GO:0097367 GO:0140098 GO:0140101 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

DALR_2 tRNA-synt_1e

Protein Analysis

498

Amino Acids

56.74

Weight (kDa)

9.06

Isoelectric Point (pI)

62.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1e	PF01406	9 - 159	1.6e-53	tRNA synthetases class I (C) catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001861)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56300 AT3G56300 AT3G56300
fragaria_vesca	FvH4_2g17241 FvH4_3g19570 FvH4_3g19580 FvH4_3g19590 FvH4_4g27030 FvH4_4g27030 FvH4_4g27030
malus_domestica	MD04G1098100.v1.1 MD13G1039300.v1.1 MD16G1040200.v1.1 MD16G1076600.v1.1 MD17G1183300.v1.1
prunus_persica	Prupe.1G313900_v2.0.a1
pyrus_communis	pycom04g11630 pycom13g03380 pycom16g03490
rosa_chinensis	RchiOBHm_Chr1g0323701 RchiOBHm_Chr1g0362331 RchiOBHm_Chr2g0088831 RchiOBHm_Chr4g0434831 RchiOBHm_Chr5g0002801 RchiOBHm_Chr5g0002811
rosa_laevigata	RLG00000006644 RLG00000031061
rosa_multiflora	Rmu_sc0000633.1_g000010 Rmu_sc0013603.1_g000016
rosa_roxburghii	Rroxscaffold_1G00073040 Rroxscaffold_5G00376040
rosa_rugosa	Rorug04G0279300 Rorug04G0279300 Rorug04G0399800
rosa_samantha	Rh1DG061300 Rh3CG112600 Rh4AG335300 Rh4BG343800 Rh4CG358200 Rh4DG337700 Rh5AG022600 Rh5BG025300 Rh5CG025100 Rh5DG023700
rosa_wichuraiana	Rw4G029240 Rw5G002100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1460
AasI	GACNNNNNNGTC	1 cut(s)	640
AatII	GACGTC	1 cut(s)	552
Acc16I	TGCGCA	1 cut(s)	429
AccI	GTMKAC	1 cut(s)	1219
AciI	CCGC	2 cut(s)	80, 284
AcoI	YGGCCR	1 cut(s)	1106
AcsI	RAATTY	3 cut(s)	28, 61, 591
AcyI	GRCGYC	1 cut(s)	549
AfaI	GTAC	1 cut(s)	823
AfiI	CCNNNNNNNGG	1 cut(s)	1241
AflII	CTTAAG	1 cut(s)	725
AhdI	GACNNNNNGTC	1 cut(s)	1132
AjnI	CCWGG	4 cut(s)	151, 184, 324, 867
AluBI	AGCT	5 cut(s)	466, 482, 602, 616, 974
AluI	AGCT	5 cut(s)	466, 482, 602, 616, 974
Alw26I	GTCTC	3 cut(s)	403, 782, 1119
AlwNI	CAGNNNCTG	1 cut(s)	485
AoxI	GGCC	4 cut(s)	191, 870, 1106, 1246
ApeKI	GCWGC	7 cut(s)	317, 482, 602, 838, 999, 1024, 1209
ApoI	RAATTY	3 cut(s)	28, 61, 591
ArsI	GACNNNNNNTTYG	2 cut(s)	664, 696
Asp700I	GAANNNNTTC	2 cut(s)	746, 1481
AspLEI	GCGC	1 cut(s)	430
AspS9I	GGNCC	2 cut(s)	182, 871
AsuC2I	CCSGG	1 cut(s)	195
AsuHPI	GGTGA	2 cut(s)	95, 1181
AvaII	GGWCC	1 cut(s)	182
BaeGI	GKGCMC	1 cut(s)	229
BalI	TGGCCA	1 cut(s)	1108
BbsI	GAAGAC	1 cut(s)	552
BbvI	GCAGC	7 cut(s)	304, 469, 589, 850, 986, 1036, 1221
BciT130I	CCWGG	4 cut(s)	153, 186, 326, 869
BclI	TGATCA	1 cut(s)	1056
BcnI	CCSGG	1 cut(s)	195
BcoDI	GTCTC	3 cut(s)	403, 782, 1119
BfaI	CTAG	1 cut(s)	1495
BfmI	CTRYAG	1 cut(s)	120
BfrI	CTTAAG	1 cut(s)	725
BglI	GCCNNNNNGGC	1 cut(s)	199
BglII	AGATCT	1 cut(s)	437
BisI	GCNGC	7 cut(s)	318, 483, 603, 839, 1000, 1025, 1210
BlsI	GCNGC	7 cut(s)	319, 484, 604, 840, 1001, 1026, 1211
Bme1390I	CCNGG	5 cut(s)	153, 186, 195, 326, 869
Bme18I	GGWCC	1 cut(s)	182
BmeRI	GACNNNNNGTC	1 cut(s)	1132
BmgT120I	GGNCC	2 cut(s)	182, 871
BmiI	GGNNCC	2 cut(s)	183, 743
BmrFI	CCNGG	5 cut(s)	153, 186, 195, 326, 869
BmsI	GCATC	8 cut(s)	295, 485, 514, 679, 763, 1195, 1300, 1393
BpiI	GAAGAC	1 cut(s)	552
BpmI	CTGGAG	2 cut(s)	174, 1143
BpuEI	CTTGAG	2 cut(s)	582, 715
BpuMI	CCSGG	1 cut(s)	195
BsaBI	GATNNNNATC	1 cut(s)	1093
BsaHI	GRCGYC	1 cut(s)	549
BsaI	GGTCTC	1 cut(s)	1119
BsaJI	CCNNGG	3 cut(s)	176, 194, 1109
BsaXI	ACNNNNNCTCC	2 cut(s)	1116, 1146
Bsc4I	CCNNNNNNNGG	1 cut(s)	1241
Bse1I	ACTGG	2 cut(s)	679, 745
Bse8I	GATNNNNATC	1 cut(s)	1093
BseBI	CCWGG	4 cut(s)	153, 186, 326, 869
BseDI	CCNNGG	3 cut(s)	176, 194, 1109
BseGI	GGATG	4 cut(s)	12, 754, 857, 1107
BseJI	GATNNNNATC	1 cut(s)	1093
BseLI	CCNNNNNNNGG	1 cut(s)	1241
BseMII	CTCAG	1 cut(s)	936
BseNI	ACTGG	2 cut(s)	679, 745
BseSI	GKGCMC	1 cut(s)	229
BseXI	GCAGC	7 cut(s)	304, 469, 589, 850, 986, 1036, 1221
BseYI	CCCAGC	1 cut(s)	462
BshFI	GGCC	4 cut(s)	193, 872, 1108, 1248
BsiSI	CCGG	1 cut(s)	194
BslFI	GGGAC	2 cut(s)	195, 1120
BslI	CCNNNNNNNGG	1 cut(s)	1241
BsmAI	GTCTC	3 cut(s)	403, 782, 1119
BsmFI	GGGAC	2 cut(s)	195, 1120
BsmI	GAATGC	1 cut(s)	215
BsnI	GGCC	4 cut(s)	193, 872, 1108, 1248
Bso31I	GGTCTC	1 cut(s)	1119
Bsp1286I	GDGCHC	1 cut(s)	229
Bsp143I	GATC	4 cut(s)	437, 721, 1056, 1061
BspACI	CCGC	2 cut(s)	80, 284
BspANI	GGCC	4 cut(s)	193, 872, 1108, 1248
BspCNI	CTCAG	1 cut(s)	937
BspHI	TCATGA	1 cut(s)	289
BspLI	GGNNCC	2 cut(s)	183, 743
BspMAI	CTGCAG	1 cut(s)	124
BspTI	CTTAAG	1 cut(s)	725
BspTNI	GGTCTC	1 cut(s)	1119
BsrI	ACTGG	2 cut(s)	679, 745
BssECI	CCNNGG	3 cut(s)	176, 194, 1109
BssMI	GATC	4 cut(s)	437, 721, 1056, 1061
BssNI	GRCGYC	1 cut(s)	549
BssT1I	CCWWGG	2 cut(s)	176, 1109
Bst2UI	CCWGG	4 cut(s)	153, 186, 326, 869
Bst4CI	ACNGT	7 cut(s)	359, 402, 455, 586, 710, 1343, 1436
Bst6I	CTCTTC	1 cut(s)	895
BstACI	GRCGYC	1 cut(s)	549
BstAFI	CTTAAG	1 cut(s)	725
BstAPI	GCANNNNNTGC	2 cut(s)	128, 482
BstC8I	GCNNGC	2 cut(s)	322, 1004
BstDEI	CTNAG	2 cut(s)	369, 945
BstENI	CCTNNNNNAGG	1 cut(s)	1239
BstF5I	GGATG	4 cut(s)	12, 754, 857, 1107
BstHHI	GCGC	1 cut(s)	430
BstKTI	GATC	4 cut(s)	440, 724, 1059, 1064
BstMAI	GTCTC	3 cut(s)	403, 782, 1119
BstMBI	GATC	4 cut(s)	437, 721, 1056, 1061
BstMWI	GCNNNNNNNGC	5 cut(s)	128, 199, 224, 482, 844
BstNI	CCWGG	4 cut(s)	153, 186, 326, 869
BstNSI	RCATGY	2 cut(s)	324, 817
BstSCI	CCNGG	5 cut(s)	151, 184, 193, 324, 867
BstSFI	CTRYAG	1 cut(s)	120
BstSLI	GKGCMC	1 cut(s)	229
BstV1I	GCAGC	7 cut(s)	304, 469, 589, 850, 986, 1036, 1221
BstV2I	GAAGAC	1 cut(s)	552
BstX2I	RGATCY	1 cut(s)	437
BstXI	CCANNNNNNTGG	1 cut(s)	41
BstYI	RGATCY	1 cut(s)	437
BsuRI	GGCC	4 cut(s)	193, 872, 1108, 1248
BtsCI	GGATG	4 cut(s)	12, 754, 857, 1107
BtsI	GCAGTG	2 cut(s)	220, 1159
BtsIMutI	CAGTG	7 cut(s)	204, 220, 398, 460, 1159, 1339, 1432
Cac8I	GCNNGC	2 cut(s)	322, 1004
CaiI	CAGNNNCTG	1 cut(s)	485
CciI	TCATGA	1 cut(s)	289
CfoI	GCGC	1 cut(s)	430
Cfr13I	GGNCC	2 cut(s)	182, 871
Csp6I	GTAC	1 cut(s)	822
CspCI	CAANNNNNGTGG	2 cut(s)	387, 422
CviAII	CATG	9 cut(s)	220, 257, 290, 321, 362, 814, 1098, 1273, 1366
CviQI	GTAC	1 cut(s)	822
DdeI	CTNAG	2 cut(s)	369, 945
DpnI	GATC	4 cut(s)	439, 723, 1058, 1063
DpnII	GATC	4 cut(s)	437, 721, 1056, 1061
DrdI	GACNNNNNNGTC	1 cut(s)	640
DriI	GACNNNNNGTC	1 cut(s)	1132
DseDI	GACNNNNNNGTC	1 cut(s)	640
EaeI	YGGCCR	1 cut(s)	1106
Eam1104I	CTCTTC	1 cut(s)	895
Eam1105I	GACNNNNNGTC	1 cut(s)	1132
EarI	CTCTTC	1 cut(s)	895
Eco130I	CCWWGG	2 cut(s)	176, 1109
Eco31I	GGTCTC	1 cut(s)	1119
Eco47I	GGWCC	1 cut(s)	182
EcoNI	CCTNNNNNAGG	1 cut(s)	1239
EcoO109I	RGGNCCY	1 cut(s)	871
EcoRII	CCWGG	4 cut(s)	151, 184, 324, 867
EcoT14I	CCWWGG	2 cut(s)	176, 1109
EcoT22I	ATGCAT	2 cut(s)	1467, 1473
ErhI	CCWWGG	2 cut(s)	176, 1109
FaeI	CATG	9 cut(s)	223, 260, 293, 324, 365, 817, 1101, 1276, 1369
FalI	AAGNNNNNCTT	4 cut(s)	958, 990, 986, 1018
FaqI	GGGAC	2 cut(s)	195, 1120
FatI	CATG	9 cut(s)	219, 256, 289, 320, 361, 813, 1097, 1272, 1365
FauI	CCCGC	1 cut(s)	73
FauNDI	CATATG	1 cut(s)	1467
FbaI	TGATCA	1 cut(s)	1056
FblI	GTMKAC	1 cut(s)	1219
Fnu4HI	GCNGC	7 cut(s)	318, 483, 603, 839, 1000, 1025, 1210
FokI	GGATG	4 cut(s)	19, 741, 844, 1114
Fsp4HI	GCNGC	7 cut(s)	318, 483, 603, 839, 1000, 1025, 1210
FspAI	RTGCGCAY	1 cut(s)	429
FspBI	CTAG	1 cut(s)	1495
FspI	TGCGCA	1 cut(s)	429
GlaI	GCGC	1 cut(s)	429
GluI	GCNGC	7 cut(s)	318, 483, 603, 839, 1000, 1025, 1210
GsaI	CCCAGC	1 cut(s)	466
GsuI	CTGGAG	2 cut(s)	174, 1143
HaeIII	GGCC	4 cut(s)	193, 872, 1108, 1248
HapII	CCGG	1 cut(s)	194
HhaI	GCGC	1 cut(s)	430
Hin1I	GRCGYC	1 cut(s)	549
Hin1II	CATG	9 cut(s)	223, 260, 293, 324, 365, 817, 1101, 1276, 1369
Hin6I	GCGC	1 cut(s)	428
HinP1I	GCGC	1 cut(s)	428
HincII	GTYRAC	1 cut(s)	1220
HindII	GTYRAC	1 cut(s)	1220
HindIII	AAGCTT	1 cut(s)	972
HinfI	GANTC	3 cut(s)	158, 458, 1118
HpaII	CCGG	1 cut(s)	194
HphI	GGTGA	2 cut(s)	95, 1181
Hpy166II	GTNNAC	3 cut(s)	86, 733, 1220
Hpy188I	TCNGA	9 cut(s)	163, 504, 646, 934, 946, 1061, 1066, 1302, 1395
Hpy188III	TCNNGA	8 cut(s)	54, 290, 542, 553, 829, 1122, 1321, 1414
Hpy8I	GTNNAC	3 cut(s)	86, 733, 1220
HpyAV	CCTTC	8 cut(s)	183, 550, 554, 1176, 1343, 1352, 1436, 1445
HpyCH4III	ACNGT	7 cut(s)	359, 402, 455, 586, 710, 1343, 1436
HpyCH4IV	ACGT	1 cut(s)	549
HpyF10VI	GCNNNNNNNGC	5 cut(s)	128, 199, 224, 482, 844
HpyF3I	CTNAG	2 cut(s)	369, 945
HpySE526I	ACGT	1 cut(s)	549
Hsp92I	GRCGYC	1 cut(s)	549
Hsp92II	CATG	9 cut(s)	223, 260, 293, 324, 365, 817, 1101, 1276, 1369
HspAI	GCGC	1 cut(s)	428
Ksp22I	TGATCA	1 cut(s)	1056
Kzo9I	GATC	4 cut(s)	437, 721, 1056, 1061
Lsp1109I	GCAGC	7 cut(s)	304, 469, 589, 850, 986, 1036, 1221
LweI	GCATC	8 cut(s)	295, 485, 514, 679, 763, 1195, 1300, 1393
MaeI	CTAG	1 cut(s)	1495
MaeII	ACGT	1 cut(s)	549
MaeIII	GTNAC	1 cut(s)	364
MalI	GATC	4 cut(s)	439, 723, 1058, 1063
MboI	GATC	4 cut(s)	437, 721, 1056, 1061
MboII	GAAGA	7 cut(s)	533, 557, 844, 912, 1024, 1186, 1264
MfeI	CAATTG	1 cut(s)	1007
MflI	RGATCY	1 cut(s)	437
MhlI	GDGCHC	1 cut(s)	229
MlsI	TGGCCA	1 cut(s)	1108
MluNI	TGGCCA	1 cut(s)	1108
MlyI	GAGTC	1 cut(s)	167
MnlI	CCTC	8 cut(s)	322, 606, 690, 769, 940, 940, 1164, 1238
Mox20I	TGGCCA	1 cut(s)	1108
Mph1103I	ATGCAT	2 cut(s)	1467, 1473
MroXI	GAANNNNTTC	2 cut(s)	746, 1481
MscI	TGGCCA	1 cut(s)	1108
MseI	TTAA	8 cut(s)	104, 422, 588, 612, 630, 726, 1292, 1385
MslI	CAYNNNNRTG	2 cut(s)	261, 1102
Msp20I	TGGCCA	1 cut(s)	1108
MspA1I	CMGCKG	2 cut(s)	466, 482
MspCI	CTTAAG	1 cut(s)	725
MspI	CCGG	1 cut(s)	194
MspR9I	CCNGG	5 cut(s)	153, 186, 195, 326, 869
MunI	CAATTG	1 cut(s)	1007
Mva1269I	GAATGC	1 cut(s)	215
MvaI	CCWGG	4 cut(s)	153, 186, 326, 869
MwoI	GCNNNNNNNGC	5 cut(s)	128, 199, 224, 482, 844
NciI	CCSGG	1 cut(s)	195
NdeI	CATATG	1 cut(s)	1467
NdeII	GATC	4 cut(s)	437, 721, 1056, 1061
NlaIII	CATG	9 cut(s)	223, 260, 293, 324, 365, 817, 1101, 1276, 1369
NlaIV	GGNNCC	2 cut(s)	183, 743
NsbI	TGCGCA	1 cut(s)	429
NsiI	ATGCAT	2 cut(s)	1467, 1473
NspI	RCATGY	2 cut(s)	324, 817
PaeI	GCATGC	1 cut(s)	324
PagI	TCATGA	1 cut(s)	289
PctI	GAATGC	1 cut(s)	215
PdmI	GAANNNNTTC	2 cut(s)	746, 1481
PfeI	GAWTC	2 cut(s)	458, 1118
PkrI	GCNGC	7 cut(s)	319, 484, 604, 840, 1001, 1026, 1211
PleI	GAGTC	1 cut(s)	166
PpsI	GAGTC	1 cut(s)	166
PsiI	TTATAA	1 cut(s)	1460
Psp6I	CCWGG	4 cut(s)	151, 184, 324, 867
PspFI	CCCAGC	1 cut(s)	462
PspGI	CCWGG	4 cut(s)	151, 184, 324, 867
PspN4I	GGNNCC	2 cut(s)	183, 743
PspPI	GGNCC	2 cut(s)	182, 871
PstI	CTGCAG	1 cut(s)	124
PstNI	CAGNNNCTG	1 cut(s)	485
PsuI	RGATCY	1 cut(s)	437
PvuII	CAGCTG	2 cut(s)	466, 482
RsaI	GTAC	1 cut(s)	823
RsaNI	GTAC	1 cut(s)	822
RseI	CAYNNNNRTG	2 cut(s)	261, 1102
SalI	GTCGAC	1 cut(s)	1218
SaqAI	TTAA	8 cut(s)	104, 422, 588, 612, 630, 726, 1292, 1385
SatI	GCNGC	7 cut(s)	318, 483, 603, 839, 1000, 1025, 1210
Sau3AI	GATC	4 cut(s)	437, 721, 1056, 1061
Sau96I	GGNCC	2 cut(s)	182, 871
SchI	GAGTC	1 cut(s)	167
ScrFI	CCNGG	5 cut(s)	153, 186, 195, 326, 869
SduI	GDGCHC	1 cut(s)	229
SfaNI	GCATC	8 cut(s)	295, 485, 514, 679, 763, 1195, 1300, 1393
SfcI	CTRYAG	1 cut(s)	120
SinI	GGWCC	1 cut(s)	182
SmiMI	CAYNNNNRTG	2 cut(s)	261, 1102
SmlI	CTYRAG	3 cut(s)	597, 694, 725
SmoI	CTYRAG	3 cut(s)	597, 694, 725
SphI	GCATGC	1 cut(s)	324
SsiI	CCGC	2 cut(s)	80, 284
SspI	AATATT	1 cut(s)	379
SspMI	CTAG	1 cut(s)	1495
StyD4I	CCNGG	5 cut(s)	151, 184, 193, 324, 867
StyI	CCWWGG	2 cut(s)	176, 1109
TaaI	ACNGT	7 cut(s)	359, 402, 455, 586, 710, 1343, 1436
TaiI	ACGT	1 cut(s)	552
TaqI	TCGA	2 cut(s)	701, 1219
TatI	WGTACW	1 cut(s)	821
TfiI	GAWTC	2 cut(s)	458, 1118
Tru1I	TTAA	8 cut(s)	104, 422, 588, 612, 630, 726, 1292, 1385
Tru9I	TTAA	8 cut(s)	104, 422, 588, 612, 630, 726, 1292, 1385
TscAI	CASTG	7 cut(s)	211, 220, 405, 460, 1166, 1346, 1439
TseI	GCWGC	7 cut(s)	317, 482, 602, 838, 999, 1024, 1209
TspDTI	ATGAA	6 cut(s)	245, 306, 1289, 1293, 1382, 1386
TspGWI	ACGGA	2 cut(s)	634, 850
TspRI	CASTG	7 cut(s)	211, 220, 405, 460, 1166, 1346, 1439
Vha464I	CTTAAG	1 cut(s)	725
VpaK11BI	GGWCC	1 cut(s)	182
XagI	CCTNNNNNAGG	1 cut(s)	1239
XapI	RAATTY	3 cut(s)	28, 61, 591
XceI	RCATGY	2 cut(s)	324, 817
XmiI	GTMKAC	1 cut(s)	1219
XmnI	GAANNNNTTC	2 cut(s)	746, 1481
XspI	CTAG	1 cut(s)	1495
ZraI	GACGTC	1 cut(s)	550
Zsp2I	ATGCAT	2 cut(s)	1467, 1473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.