pycom04g17850

Protein kinase C conserved region 2 (CalB)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
20078007 .. 20079382
1376 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g17850.2

Sequence Viewer

Length: 1020 bp
ATGTTTTCTTTCTCACGTTCAATGAAGCTTCACAGAAGCTGCCTTTTCTTTTGTCTTCATCCTCACCTCCCCTGCTCTATAAATTCAAGATTTTTATCCAACGCTCCACAACTCAACAATTTCCCAAATCTTCCAAATTCCAGTCGAACAATCTTCTTCTTCCAAATTCCAATTTCAATAACTCTCAGGAATCATCGCCATGGATTGCAGGCCTCTGGAGGTAATCATCGACTCGGCCAACGACCTCAAGGATGTCAATCTCTTCTCCAAGATGGACGTCTATGCCGCCGTTTCGGTCGCCGGCGACCCCCGCAACAAGAATGGACCAGCTACCCCATCAGGTTCACCGTCGACGAAGCCGCCCTCCTCAACAACCGCCTCACCCTCAACGTCAAGCTCGTCTCCGAACGCACTTTGGGAGACACCAAGATCGGCAAGGTCAAGATCCCGCTCAAGGAGCTACTCGACACCATGGGCGGCGGCGATGATCAGAAGAAGCAGATCAAGCACGTCAGCTACGGCCTCCGATCGTCGAGCGGAAAGCCCAAGGGGACCATCAATTTCGGGTACAAATTCGGTGACAAGTTTTCGGTTCCGGCTCCAGAGCCCCAGAAGAAAGCCTACGAGCCCGTGATGGCATACCCGACTGGACAGCCCGGGTCAAGCTCCGGCTACCCGCCCGCGGGTGCCTACCCACGTACCCAAGCTTACCCATACCCGCCACCCGGTGGGTACCCACCACCGCCTCATCAGCAACCGGGTTATGGGTACGCGCCACCGCCACAAGCCGGGTACGGATACCCGCCTCAGCCGGGGTACGGGTACCCGCCGCAGCAAGTTGTGCAGCCGCAGAAGCCTAAGAGGGGCGGAGGAGGGAACATGGCGATGGGTGTGGGAGCTGGGTTGCTGGGTGGATTATTGATCGGGGATATGATTGGGGACGTGGGTGAGATGGGCGCTTATGATGCTGGCTACGATGCTGGGGTCGGTGATGACTTTGGTGGTGGCTTTGATTTCTAG

Protein Analysis

340

Amino Acids

36.89

Weight (kDa)

9.65

Isoelectric Point (pI)

52.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 280
Acc65I GGTACC 2 cut(s) 732, 822
AccB1I GGYRCC 3 cut(s) 686, 732, 822
AccB7I CCANNNNNTGG 1 cut(s) 728
AccBSI CCGCTC 2 cut(s) 451, 537
AccI GTMKAC 1 cut(s) 351
AccII CGCG 2 cut(s) 683, 773
AclWI GGATC 1 cut(s) 439
AcoI YGGCCR 1 cut(s) 235
AcsI RAATTY 4 cut(s) 82, 136, 165, 572
AcyI GRCGYC 1 cut(s) 277
AdeI CACNNNGTG 1 cut(s) 728
AfaI GTAC 7 cut(s) 569, 700, 734, 770, 794, 818, 824
AgsI TTSAA 3 cut(s) 21, 87, 177
AjiI CACGTC 2 cut(s) 511, 943
AluBI AGCT 9 cut(s) 28, 39, 330, 397, 460, 516, 666, 707, 899
AluI AGCT 9 cut(s) 28, 39, 330, 397, 460, 516, 666, 707, 899
Alw26I GTCTC 2 cut(s) 406, 414
AlwI GGATC 1 cut(s) 439
AlwNI CAGNNNCTG 1 cut(s) 39
Ama87I CYCGRG 1 cut(s) 656
AoxI GGCC 3 cut(s) 210, 235, 520
ApeKI GCWGC 3 cut(s) 39, 832, 844
ApoI RAATTY 4 cut(s) 82, 136, 165, 572
Asp718I GGTACC 2 cut(s) 732, 822
AspLEI GCGC 2 cut(s) 775, 959
AspS9I GGNCC 2 cut(s) 324, 552
AsuC2I CCSGG 6 cut(s) 657, 658, 726, 759, 790, 813
AsuHPI GGTGA 6 cut(s) 56, 337, 373, 590, 959, 1001
AvaI CYCGRG 1 cut(s) 656
AvaII GGWCC 2 cut(s) 324, 552
BaeI ACNNNNGTAYC 2 cut(s) 682, 715
BanI GGYRCC 3 cut(s) 686, 732, 822
BanII GRGCYC 2 cut(s) 609, 630
BarI GAAGNNNNNNTAC 2 cut(s) 605, 637
BbsI GAAGAC 1 cut(s) 47
BbvCI CCTCAGC 1 cut(s) 807
BbvI GCAGC 3 cut(s) 26, 844, 856
BccI CCATC 6 cut(s) 266, 344, 563, 628, 880, 946
BceAI ACGGC 2 cut(s) 273, 535
BciVI GTATCC 1 cut(s) 791
BclI TGATCA 1 cut(s) 487
BcnI CCSGG 6 cut(s) 657, 658, 726, 759, 790, 813
BcoDI GTCTC 2 cut(s) 406, 414
BfaI CTAG 1 cut(s) 1018
BfoI RGCGCY 1 cut(s) 960
BfuI GTATCC 1 cut(s) 791
BisI GCNGC 9 cut(s) 40, 286, 360, 478, 481, 830, 833, 845, 848
BlsI GCNGC 9 cut(s) 41, 287, 361, 479, 482, 831, 834, 846, 849
Bme1390I CCNGG 6 cut(s) 657, 658, 726, 759, 790, 813
Bme18I GGWCC 2 cut(s) 324, 552
BmeT110I CYCGRG 1 cut(s) 656
BmgBI CACGTC 2 cut(s) 511, 943
BmgT120I GGNCC 2 cut(s) 324, 552
BmiI GGNNCC 6 cut(s) 553, 594, 600, 688, 734, 824
BmrFI CCNGG 6 cut(s) 657, 658, 726, 759, 790, 813
BmsI GCATC 2 cut(s) 955, 967
BpiI GAAGAC 1 cut(s) 47
BpmI CTGGAG 2 cut(s) 237, 585
Bpu10I CCTNAGC 1 cut(s) 807
BpuEI CTTGAG 2 cut(s) 231, 437
BpuMI CCSGG 6 cut(s) 657, 658, 726, 759, 790, 813
BsaAI YACGTR 1 cut(s) 698
BsaBI GATNNNNATC 2 cut(s) 94, 256
BsaHI GRCGYC 1 cut(s) 277
BsaJI CCNNGG 6 cut(s) 199, 471, 546, 656, 681, 812
Bse118I RCCGGY 1 cut(s) 300
Bse1I ACTGG 2 cut(s) 141, 652
Bse8I GATNNNNATC 2 cut(s) 94, 256
BseDI CCNNGG 6 cut(s) 199, 471, 546, 656, 681, 812
BseGI GGATG 2 cut(s) 58, 257
BseJI GATNNNNATC 2 cut(s) 94, 256
BseMII CTCAG 2 cut(s) 199, 821
BseNI ACTGG 2 cut(s) 141, 652
BseRI GAGGAG 2 cut(s) 356, 885
BseXI GCAGC 3 cut(s) 26, 844, 856
BseYI CCCAGC 3 cut(s) 899, 907, 980
BsgI GTGCAG 1 cut(s) 863
Bsh1236I CGCG 2 cut(s) 683, 773
Bsh1285I CGRYCG 2 cut(s) 298, 530
BshFI GGCC 3 cut(s) 212, 237, 522
BshNI GGYRCC 3 cut(s) 686, 732, 822
BsiEI CGRYCG 2 cut(s) 298, 530
BsiHKCI CYCGRG 1 cut(s) 656
BsiSI CCGG 8 cut(s) 301, 596, 657, 669, 726, 758, 789, 812
BslFI GGGAC 2 cut(s) 565, 953
BsmAI GTCTC 2 cut(s) 406, 414
BsmBI CGTCTC 1 cut(s) 406
BsmFI GGGAC 2 cut(s) 565, 953
BsnI GGCC 3 cut(s) 212, 237, 522
BsoBI CYCGRG 1 cut(s) 656
Bsp1286I GDGCHC 2 cut(s) 609, 630
Bsp143I GATC 6 cut(s) 429, 444, 487, 501, 527, 921
Bsp19I CCATGG 2 cut(s) 199, 471
BspANI GGCC 3 cut(s) 212, 237, 522
BspCNI CTCAG 2 cut(s) 198, 820
BspFNI CGCG 2 cut(s) 683, 773
BspLI GGNNCC 6 cut(s) 553, 594, 600, 688, 734, 824
BspPI GGATC 1 cut(s) 439
BspT107I GGYRCC 3 cut(s) 686, 732, 822
BsrBI CCGCTC 2 cut(s) 451, 537
BsrFI RCCGGY 1 cut(s) 300
BsrI ACTGG 2 cut(s) 141, 652
BssAI RCCGGY 1 cut(s) 300
BssECI CCNNGG 6 cut(s) 199, 471, 546, 656, 681, 812
BssMI GATC 6 cut(s) 429, 444, 487, 501, 527, 921
BssNI GRCGYC 1 cut(s) 277
BssT1I CCWWGG 3 cut(s) 199, 471, 546
Bst4CI ACNGT 1 cut(s) 349
Bst6I CTCTTC 1 cut(s) 267
BstACI GRCGYC 1 cut(s) 277
BstAPI GCANNNNNTGC 1 cut(s) 841
BstBAI YACGTR 1 cut(s) 698
BstC8I GCNNGC 4 cut(s) 210, 302, 681, 970
BstDEI CTNAG 3 cut(s) 185, 807, 858
BstDSI CCRYGG 3 cut(s) 199, 471, 681
BstF5I GGATG 2 cut(s) 58, 257
BstFNI CGCG 2 cut(s) 683, 773
BstH2I RGCGCY 1 cut(s) 960
BstHHI GCGC 2 cut(s) 775, 959
BstKTI GATC 6 cut(s) 432, 447, 490, 504, 530, 924
BstMAI GTCTC 2 cut(s) 406, 414
BstMBI GATC 6 cut(s) 429, 444, 487, 501, 527, 921
BstMCI CGRYCG 2 cut(s) 298, 530
BstMWI GCNNNNNNNGC 7 cut(s) 310, 457, 505, 751, 841, 853, 965
BstSCI CCNGG 6 cut(s) 655, 656, 724, 757, 788, 811
BstUI CGCG 2 cut(s) 683, 773
BstV1I GCAGC 3 cut(s) 26, 844, 856
BstV2I GAAGAC 1 cut(s) 47
BstX2I RGATCY 1 cut(s) 444
BstYI RGATCY 1 cut(s) 444
BsuI GTATCC 1 cut(s) 791
BsuRI GGCC 3 cut(s) 212, 237, 522
BtgI CCRYGG 3 cut(s) 199, 471, 681
BtgZI GCGATG 3 cut(s) 179, 498, 899
BtrI CACGTC 2 cut(s) 511, 943
BtsCI GGATG 2 cut(s) 58, 257
Cac8I GCNNGC 4 cut(s) 210, 302, 681, 970
CaiI CAGNNNCTG 1 cut(s) 39
CfoI GCGC 2 cut(s) 775, 959
Cfr10I RCCGGY 1 cut(s) 300
Cfr13I GGNCC 2 cut(s) 324, 552
Cfr42I CCGCGG 1 cut(s) 684
Cfr9I CCCGGG 1 cut(s) 656
Csp6I GTAC 7 cut(s) 568, 699, 733, 769, 793, 817, 823
CviAII CATG 3 cut(s) 200, 472, 880
CviQI GTAC 7 cut(s) 568, 699, 733, 769, 793, 817, 823
DdeI CTNAG 3 cut(s) 185, 807, 858
DpnI GATC 6 cut(s) 431, 446, 489, 503, 529, 923
DpnII GATC 6 cut(s) 429, 444, 487, 501, 527, 921
DraIII CACNNNGTG 1 cut(s) 728
EaeI YGGCCR 1 cut(s) 235
Eam1104I CTCTTC 1 cut(s) 267
EarI CTCTTC 1 cut(s) 267
EciI GGCGGA 1 cut(s) 882
Eco130I CCWWGG 3 cut(s) 199, 471, 546
Eco147I AGGCCT 1 cut(s) 212
Eco24I GRGCYC 2 cut(s) 609, 630
Eco47I GGWCC 2 cut(s) 324, 552
Eco88I CYCGRG 1 cut(s) 656
EcoT14I CCWWGG 3 cut(s) 199, 471, 546
EcoT38I GRGCYC 2 cut(s) 609, 630
ErhI CCWWGG 3 cut(s) 199, 471, 546
Esp3I CGTCTC 1 cut(s) 406
FaeI CATG 3 cut(s) 203, 475, 883
FaqI GGGAC 2 cut(s) 565, 953
FatI CATG 3 cut(s) 199, 471, 879
FauI CCCGC 8 cut(s) 318, 456, 676, 684, 688, 726, 810, 834
FbaI TGATCA 1 cut(s) 487
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 9 cut(s) 40, 286, 360, 478, 481, 830, 833, 845, 848
FokI GGATG 2 cut(s) 45, 264
FriOI GRGCYC 2 cut(s) 609, 630
Fsp4HI GCNGC 9 cut(s) 40, 286, 360, 478, 481, 830, 833, 845, 848
FspBI CTAG 1 cut(s) 1018
GlaI GCGC 2 cut(s) 774, 958
GluI GCNGC 9 cut(s) 40, 286, 360, 478, 481, 830, 833, 845, 848
GsaI CCCAGC 3 cut(s) 903, 911, 984
GsuI CTGGAG 2 cut(s) 237, 585
HaeII RGCGCY 1 cut(s) 960
HaeIII GGCC 3 cut(s) 212, 237, 522
HapII CCGG 8 cut(s) 301, 596, 657, 669, 726, 758, 789, 812
HhaI GCGC 2 cut(s) 775, 959
Hin1I GRCGYC 1 cut(s) 277
Hin1II CATG 3 cut(s) 203, 475, 883
Hin6I GCGC 2 cut(s) 773, 957
HinP1I GCGC 2 cut(s) 773, 957
HincII GTYRAC 1 cut(s) 352
HindII GTYRAC 1 cut(s) 352
HindIII AAGCTT 2 cut(s) 26, 705
HinfI GANTC 2 cut(s) 190, 231
HpaII CCGG 8 cut(s) 301, 596, 657, 669, 726, 758, 789, 812
HphI GGTGA 6 cut(s) 56, 337, 373, 590, 959, 1001
Hpy166II GTNNAC 2 cut(s) 345, 352
Hpy188I TCNGA 3 cut(s) 406, 492, 527
Hpy188III TCNNGA 5 cut(s) 87, 187, 216, 442, 602
Hpy8I GTNNAC 2 cut(s) 345, 352
Hpy99I CGWCG 3 cut(s) 353, 356, 535
HpyCH4III ACNGT 1 cut(s) 349
HpyCH4IV ACGT 6 cut(s) 16, 277, 390, 510, 697, 942
HpyCH4V TGCA 2 cut(s) 208, 844
HpyF10VI GCNNNNNNNGC 7 cut(s) 310, 457, 505, 751, 841, 853, 965
HpyF3I CTNAG 3 cut(s) 185, 807, 858
HpySE526I ACGT 6 cut(s) 16, 277, 390, 510, 697, 942
Hsp92I GRCGYC 1 cut(s) 277
Hsp92II CATG 3 cut(s) 203, 475, 883
HspAI GCGC 2 cut(s) 773, 957
KpnI GGTACC 2 cut(s) 736, 826
KroI GCCGGC 1 cut(s) 300
KroNI GCCGGC 1 cut(s) 302
Ksp22I TGATCA 1 cut(s) 487
KspI CCGCGG 1 cut(s) 684
Kzo9I GATC 6 cut(s) 429, 444, 487, 501, 527, 921
LmnI GCTCC 5 cut(s) 109, 457, 604, 671, 896
Lsp1109I GCAGC 3 cut(s) 26, 844, 856
LweI GCATC 2 cut(s) 955, 967
MaeI CTAG 1 cut(s) 1018
MaeII ACGT 6 cut(s) 16, 277, 390, 510, 697, 942
MaeIII GTNAC 1 cut(s) 578
MalI GATC 6 cut(s) 431, 446, 489, 503, 529, 923
MbiI CCGCTC 2 cut(s) 451, 537
MboI GATC 6 cut(s) 429, 444, 487, 501, 527, 921
MboII GAAGA 8 cut(s) 47, 122, 145, 148, 151, 254, 505, 625
MflI RGATCY 1 cut(s) 444
MhlI GDGCHC 2 cut(s) 609, 630
MluCI AATT 7 cut(s) 82, 118, 136, 165, 171, 559, 572
MlyI GAGTC 1 cut(s) 225
MmeI TCCRAC 1 cut(s) 123
MreI CGCCGGCG 1 cut(s) 300
MroNI GCCGGC 1 cut(s) 300
MslI CAYNNNNRTG 2 cut(s) 198, 884
MspA1I CMGCKG 1 cut(s) 683
MspI CCGG 8 cut(s) 301, 596, 657, 669, 726, 758, 789, 812
MspR9I CCNGG 6 cut(s) 657, 658, 726, 759, 790, 813
MvnI CGCG 2 cut(s) 683, 773
MwoI GCNNNNNNNGC 7 cut(s) 310, 457, 505, 751, 841, 853, 965
NaeI GCCGGC 1 cut(s) 302
NciI CCSGG 6 cut(s) 657, 658, 726, 759, 790, 813
NcoI CCATGG 2 cut(s) 199, 471
NdeII GATC 6 cut(s) 429, 444, 487, 501, 527, 921
NgoMIV GCCGGC 1 cut(s) 300
NlaIII CATG 3 cut(s) 203, 475, 883
NlaIV GGNNCC 6 cut(s) 553, 594, 600, 688, 734, 824
NmeAIII GCCGAG 1 cut(s) 213
NmuCI GTSAC 1 cut(s) 578
PceI AGGCCT 1 cut(s) 212
PcsI WCGNNNNNNNCGW 1 cut(s) 396
PdiI GCCGGC 1 cut(s) 302
PfeI GAWTC 1 cut(s) 190
PflMI CCANNNNNTGG 1 cut(s) 728
PkrI GCNGC 9 cut(s) 41, 287, 361, 479, 482, 831, 834, 846, 849
Ple19I CGATCG 1 cut(s) 530
PleI GAGTC 1 cut(s) 225
PpsI GAGTC 1 cut(s) 225
Ppu21I YACGTR 1 cut(s) 698
PspFI CCCAGC 3 cut(s) 899, 907, 980
PspN4I GGNNCC 6 cut(s) 553, 594, 600, 688, 734, 824
PspPI GGNCC 2 cut(s) 324, 552
PstNI CAGNNNCTG 1 cut(s) 39
PsuI RGATCY 1 cut(s) 444
PvuI CGATCG 1 cut(s) 530
RsaI GTAC 7 cut(s) 569, 700, 734, 770, 794, 818, 824
RsaNI GTAC 7 cut(s) 568, 699, 733, 769, 793, 817, 823
RseI CAYNNNNRTG 2 cut(s) 198, 884
SacII CCGCGG 1 cut(s) 684
SalI GTCGAC 1 cut(s) 350
SatI GCNGC 9 cut(s) 40, 286, 360, 478, 481, 830, 833, 845, 848
Sau3AI GATC 6 cut(s) 429, 444, 487, 501, 527, 921
Sau96I GGNCC 2 cut(s) 324, 552
SchI GAGTC 1 cut(s) 225
ScrFI CCNGG 6 cut(s) 657, 658, 726, 759, 790, 813
SduI GDGCHC 2 cut(s) 609, 630
SfaNI GCATC 2 cut(s) 955, 967
Sfr303I CCGCGG 1 cut(s) 684
SgrAI CRCCGGYG 1 cut(s) 300
SgrBI CCGCGG 1 cut(s) 684
SgrDI CGTCGACG 1 cut(s) 350
SinI GGWCC 2 cut(s) 324, 552
SmaI CCCGGG 1 cut(s) 658
SmiMI CAYNNNNRTG 2 cut(s) 198, 884
SmlI CTYRAG 2 cut(s) 246, 452
SmoI CTYRAG 2 cut(s) 246, 452
Sse9I AATT 7 cut(s) 82, 118, 136, 165, 171, 559, 572
SseBI AGGCCT 1 cut(s) 212
SspMI CTAG 1 cut(s) 1018
StuI AGGCCT 1 cut(s) 212
StyD4I CCNGG 6 cut(s) 655, 656, 724, 757, 788, 811
StyI CCWWGG 3 cut(s) 199, 471, 546
TaaI ACNGT 1 cut(s) 349
TaiI ACGT 6 cut(s) 19, 280, 393, 513, 700, 945
TaqI TCGA 5 cut(s) 145, 229, 351, 465, 533
TaqII GACCGA 1 cut(s) 284
TasI AATT 7 cut(s) 82, 118, 136, 165, 171, 559, 572
TauI GCSGC 6 cut(s) 288, 362, 480, 483, 832, 850
TfiI GAWTC 1 cut(s) 190
TseFI GTSAC 1 cut(s) 578
TseI GCWGC 3 cut(s) 39, 832, 844
Tsp45I GTSAC 1 cut(s) 578
TspDTI ATGAA 2 cut(s) 38, 47
TspGWI ACGGA 1 cut(s) 810
TspMI CCCGGG 1 cut(s) 656
Van91I CCANNNNNTGG 1 cut(s) 728
VpaK11BI GGWCC 2 cut(s) 324, 552
XapI RAATTY 4 cut(s) 82, 136, 165, 572
XmaI CCCGGG 1 cut(s) 656
XmiI GTMKAC 1 cut(s) 351
XspI CTAG 1 cut(s) 1018
ZraI GACGTC 1 cut(s) 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.