Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 801, 2087 |
| AarI | CACCTGC | 1 cut(s) | 1827 |
| Acc36I | ACCTGC | 5 cut(s) | 878, 1827, 1836, 2195, 2283 |
| AccB1I | GGYRCC | 1 cut(s) | 567 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1327 |
| AccIII | TCCGGA | 1 cut(s) | 675 |
| AclWI | GGATC | 3 cut(s) | 962, 1358, 2030 |
| AcoI | YGGCCR | 3 cut(s) | 840, 1865, 2486 |
| AcsI | RAATTY | 5 cut(s) | 61, 1183, 1579, 1972, 2287 |
| AcuI | CTGAAG | 2 cut(s) | 1541, 2235 |
| AdeI | CACNNNGTG | 1 cut(s) | 244 |
| AfaI | GTAC | 5 cut(s) | 412, 848, 1319, 2032, 2209 |
| AflII | CTTAAG | 1 cut(s) | 1118 |
| AflIII | ACRYGT | 1 cut(s) | 1314 |
| AgsI | TTSAA | 8 cut(s) | 61, 908, 1070, 1153, 1205, 1346, 1505, 2396 |
| AjnI | CCWGG | 6 cut(s) | 36, 837, 1135, 1246, 1996, 2483 |
| Alw21I | GWGCWC | 2 cut(s) | 2012, 2174 |
| AlwI | GGATC | 3 cut(s) | 962, 1358, 2030 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2183 |
| Ama87I | CYCGRG | 3 cut(s) | 1929, 2471, 2678 |
| Aor13HI | TCCGGA | 1 cut(s) | 675 |
| AoxI | GGCC | 8 cut(s) | 553, 840, 980, 1865, 2044, 2389, 2486, 2560 |
| ApoI | RAATTY | 5 cut(s) | 61, 1183, 1579, 1972, 2287 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 531, 563 |
| AseI | ATTAAT | 1 cut(s) | 1847 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1583 |
| AspLEI | GCGC | 2 cut(s) | 493, 1537 |
| AspS9I | GGNCC | 5 cut(s) | 89, 553, 631, 1946, 2313 |
| AsuC2I | CCSGG | 4 cut(s) | 440, 1930, 1931, 2450 |
| AsuHPI | GGTGA | 4 cut(s) | 781, 1541, 2070, 2520 |
| AsuNHI | GCTAGC | 1 cut(s) | 812 |
| AvaI | CYCGRG | 3 cut(s) | 1929, 2471, 2678 |
| AvaII | GGWCC | 4 cut(s) | 89, 631, 1946, 2313 |
| AxyI | CCTNAGG | 1 cut(s) | 1530 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 394, 427 |
| BalI | TGGCCA | 2 cut(s) | 842, 1867 |
| BanI | GGYRCC | 1 cut(s) | 567 |
| BauI | CACGAG | 1 cut(s) | 1193 |
| BbsI | GAAGAC | 1 cut(s) | 2241 |
| Bbv12I | GWGCWC | 2 cut(s) | 2012, 2174 |
| BceAI | ACGGC | 1 cut(s) | 105 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 140, 174 |
| BciT130I | CCWGG | 6 cut(s) | 38, 839, 1137, 1248, 1998, 2485 |
| BciVI | GTATCC | 1 cut(s) | 1104 |
| BclI | TGATCA | 1 cut(s) | 1615 |
| BcnI | CCSGG | 4 cut(s) | 440, 1930, 1931, 2450 |
| BfaI | CTAG | 4 cut(s) | 813, 965, 1833, 2217 |
| BfmI | CTRYAG | 5 cut(s) | 756, 1332, 1359, 1394, 2175 |
| BfrI | CTTAAG | 1 cut(s) | 1118 |
| BfuAI | ACCTGC | 5 cut(s) | 878, 1827, 1836, 2195, 2283 |
| BfuI | GTATCC | 1 cut(s) | 1104 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 565, 2397 |
| Bme18I | GGWCC | 4 cut(s) | 89, 631, 1946, 2313 |
| BmeT110I | CYCGRG | 3 cut(s) | 1929, 2471, 2678 |
| BmgT120I | GGNCC | 5 cut(s) | 89, 553, 631, 1946, 2313 |
| BmiI | GGNNCC | 6 cut(s) | 91, 119, 554, 569, 1745, 2314 |
| BmrI | ACTGGG | 1 cut(s) | 1672 |
| BmsI | GCATC | 8 cut(s) | 173, 175, 681, 693, 1260, 1276, 1437, 1582 |
| BmtI | GCTAGC | 1 cut(s) | 816 |
| BmuI | ACTGGG | 1 cut(s) | 1672 |
| BpiI | GAAGAC | 1 cut(s) | 2241 |
| BpmI | CTGGAG | 2 cut(s) | 642, 1926 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1112 |
| BpuEI | CTTGAG | 4 cut(s) | 123, 2025, 2623, 2668 |
| BpuMI | CCSGG | 4 cut(s) | 440, 1930, 1931, 2450 |
| BsaAI | YACGTR | 1 cut(s) | 2366 |
| BsaI | GGTCTC | 2 cut(s) | 1212, 2265 |
| BsaWI | WCCGGW | 1 cut(s) | 675 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 615, 645 |
| Bse118I | RCCGGY | 2 cut(s) | 86, 2628 |
| Bse1I | ACTGG | 4 cut(s) | 399, 955, 1519, 1678 |
| Bse21I | CCTNAGG | 1 cut(s) | 1530 |
| BseAI | TCCGGA | 1 cut(s) | 675 |
| BseBI | CCWGG | 6 cut(s) | 38, 839, 1137, 1248, 1998, 2485 |
| BseMII | CTCAG | 7 cut(s) | 813, 1544, 1556, 1667, 1928, 1982, 2613 |
| BseNI | ACTGG | 4 cut(s) | 399, 955, 1519, 1678 |
| BseRI | GAGGAG | 2 cut(s) | 2130, 2459 |
| BshFI | GGCC | 8 cut(s) | 555, 842, 982, 1867, 2046, 2391, 2488, 2562 |
| BshNI | GGYRCC | 1 cut(s) | 567 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2012, 2174 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1929, 2471, 2678 |
| BsiSI | CCGG | 7 cut(s) | 87, 439, 676, 1930, 2449, 2489, 2629 |
| BslFI | GGGAC | 4 cut(s) | 75, 756, 1178, 2567 |
| BsmBI | CGTCTC | 1 cut(s) | 1104 |
| BsmFI | GGGAC | 4 cut(s) | 75, 756, 1178, 2567 |
| BsmI | GAATGC | 1 cut(s) | 1233 |
| BsnI | GGCC | 8 cut(s) | 555, 842, 982, 1867, 2046, 2391, 2488, 2562 |
| Bso31I | GGTCTC | 2 cut(s) | 1212, 2265 |
| BsoBI | CYCGRG | 3 cut(s) | 1929, 2471, 2678 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2012, 2174 |
| Bsp13I | TCCGGA | 1 cut(s) | 675 |
| Bsp143I | GATC | 5 cut(s) | 967, 1363, 1615, 2035, 2420 |
| Bsp19I | CCATGG | 4 cut(s) | 415, 1127, 1222, 1265 |
| BspANI | GGCC | 8 cut(s) | 555, 842, 982, 1867, 2046, 2391, 2488, 2562 |
| BspCNI | CTCAG | 7 cut(s) | 814, 1543, 1555, 1666, 1927, 1981, 2612 |
| BspEI | TCCGGA | 1 cut(s) | 675 |
| BspHI | TCATGA | 1 cut(s) | 2227 |
| BspLI | GGNNCC | 6 cut(s) | 91, 119, 554, 569, 1745, 2314 |
| BspMAI | CTGCAG | 4 cut(s) | 760, 1336, 1398, 2179 |
| BspMI | ACCTGC | 5 cut(s) | 878, 1827, 1836, 2195, 2283 |
| BspOI | GCTAGC | 1 cut(s) | 816 |
| BspPI | GGATC | 3 cut(s) | 962, 1358, 2030 |
| BspT107I | GGYRCC | 1 cut(s) | 567 |
| BspTI | CTTAAG | 1 cut(s) | 1118 |
| BspTNI | GGTCTC | 2 cut(s) | 1212, 2265 |
| BsrFI | RCCGGY | 2 cut(s) | 86, 2628 |
| BsrI | ACTGG | 4 cut(s) | 399, 955, 1519, 1678 |
| BssAI | RCCGGY | 2 cut(s) | 86, 2628 |
| BssMI | GATC | 5 cut(s) | 967, 1363, 1615, 2035, 2420 |
| BssSI | CACGAG | 1 cut(s) | 1193 |
| BssT1I | CCWWGG | 8 cut(s) | 415, 667, 806, 1127, 1174, 1222, 1265, 1495 |
| Bst2BI | CACGAG | 1 cut(s) | 1193 |
| Bst2UI | CCWGG | 6 cut(s) | 38, 839, 1137, 1248, 1998, 2485 |
| Bst4CI | ACNGT | 5 cut(s) | 700, 1059, 1762, 1941, 2267 |
| Bst6I | CTCTTC | 3 cut(s) | 16, 1648, 1899 |
| BstAFI | CTTAAG | 1 cut(s) | 1118 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1567 |
| BstBAI | YACGTR | 1 cut(s) | 2366 |
| BstDEI | CTNAG | 9 cut(s) | 822, 1112, 1530, 1542, 1653, 1914, 1968, 2111, 2599 |
| BstDSI | CCRYGG | 5 cut(s) | 415, 1127, 1222, 1265, 2667 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1995, 2320 |
| BstHHI | GCGC | 2 cut(s) | 493, 1537 |
| BstKTI | GATC | 5 cut(s) | 970, 1366, 1618, 2038, 2423 |
| BstMBI | GATC | 5 cut(s) | 967, 1363, 1615, 2035, 2420 |
| BstNI | CCWGG | 6 cut(s) | 38, 839, 1137, 1248, 1998, 2485 |
| BstNSI | RCATGY | 5 cut(s) | 80, 257, 736, 889, 1318 |
| BstSFI | CTRYAG | 5 cut(s) | 756, 1332, 1359, 1394, 2175 |
| BstSNI | TACGTA | 1 cut(s) | 2366 |
| BstV2I | GAAGAC | 1 cut(s) | 2241 |
| BstX2I | RGATCY | 2 cut(s) | 967, 1363 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 978, 2027 |
| BstYI | RGATCY | 2 cut(s) | 967, 1363 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1530 |
| BsuI | GTATCC | 1 cut(s) | 1104 |
| BsuRI | GGCC | 8 cut(s) | 555, 842, 982, 1867, 2046, 2391, 2488, 2562 |
| BtgI | CCRYGG | 5 cut(s) | 415, 1127, 1222, 1265, 2667 |
| BtgZI | GCGATG | 1 cut(s) | 1499 |
| BtsI | GCAGTG | 1 cut(s) | 2172 |
| BtsIMutI | CAGTG | 6 cut(s) | 406, 1055, 1758, 1922, 2172, 2272 |
| BveI | ACCTGC | 5 cut(s) | 878, 1827, 1836, 2195, 2283 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2183 |
| CciI | TCATGA | 1 cut(s) | 2227 |
| CfoI | GCGC | 2 cut(s) | 493, 1537 |
| Cfr10I | RCCGGY | 2 cut(s) | 86, 2628 |
| Cfr13I | GGNCC | 5 cut(s) | 89, 553, 631, 1946, 2313 |
| Cfr9I | CCCGGG | 1 cut(s) | 1929 |
| Csp6I | GTAC | 5 cut(s) | 411, 847, 1318, 2031, 2208 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1178, 1213 |
| CviQI | GTAC | 5 cut(s) | 411, 847, 1318, 2031, 2208 |
| DdeI | CTNAG | 9 cut(s) | 822, 1112, 1530, 1542, 1653, 1914, 1968, 2111, 2599 |
| DpnI | GATC | 5 cut(s) | 969, 1365, 1617, 2037, 2422 |
| DpnII | GATC | 5 cut(s) | 967, 1363, 1615, 2035, 2420 |
| DraIII | CACNNNGTG | 1 cut(s) | 244 |
| EaeI | YGGCCR | 3 cut(s) | 840, 1865, 2486 |
| Eam1104I | CTCTTC | 3 cut(s) | 16, 1648, 1899 |
| EarI | CTCTTC | 3 cut(s) | 16, 1648, 1899 |
| EciI | GGCGGA | 2 cut(s) | 917, 1654 |
| Eco105I | TACGTA | 1 cut(s) | 2366 |
| Eco130I | CCWWGG | 8 cut(s) | 415, 667, 806, 1127, 1174, 1222, 1265, 1495 |
| Eco147I | AGGCCT | 1 cut(s) | 2562 |
| Eco31I | GGTCTC | 2 cut(s) | 1212, 2265 |
| Eco47I | GGWCC | 4 cut(s) | 89, 631, 1946, 2313 |
| Eco57I | CTGAAG | 2 cut(s) | 1541, 2235 |
| Eco81I | CCTNAGG | 1 cut(s) | 1530 |
| Eco88I | CYCGRG | 3 cut(s) | 1929, 2471, 2678 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1995, 2320 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2313 |
| EcoRI | GAATTC | 4 cut(s) | 61, 1183, 1579, 1972 |
| EcoRII | CCWGG | 6 cut(s) | 36, 837, 1135, 1246, 1996, 2483 |
| EcoT14I | CCWWGG | 8 cut(s) | 415, 667, 806, 1127, 1174, 1222, 1265, 1495 |
| EcoT22I | ATGCAT | 2 cut(s) | 255, 2151 |
| ErhI | CCWWGG | 8 cut(s) | 415, 667, 806, 1127, 1174, 1222, 1265, 1495 |
| Esp3I | CGTCTC | 1 cut(s) | 1104 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2034, 2066 |
| FaqI | GGGAC | 4 cut(s) | 75, 756, 1178, 2567 |
| FauI | CCCGC | 4 cut(s) | 115, 2090, 2250, 2648 |
| FbaI | TGATCA | 1 cut(s) | 1615 |
| FspBI | CTAG | 4 cut(s) | 813, 965, 1833, 2217 |
| GlaI | GCGC | 2 cut(s) | 492, 1536 |
| GsuI | CTGGAG | 2 cut(s) | 642, 1926 |
| HaeIII | GGCC | 8 cut(s) | 555, 842, 982, 1867, 2046, 2391, 2488, 2562 |
| HapII | CCGG | 7 cut(s) | 87, 439, 676, 1930, 2449, 2489, 2629 |
| HhaI | GCGC | 2 cut(s) | 493, 1537 |
| Hin6I | GCGC | 2 cut(s) | 491, 1535 |
| HinP1I | GCGC | 2 cut(s) | 491, 1535 |
| HincII | GTYRAC | 2 cut(s) | 233, 2446 |
| HindII | GTYRAC | 2 cut(s) | 233, 2446 |
| HindIII | AAGCTT | 1 cut(s) | 208 |
| HpaII | CCGG | 7 cut(s) | 87, 439, 676, 1930, 2449, 2489, 2629 |
| HphI | GGTGA | 4 cut(s) | 781, 1541, 2070, 2520 |
| Hpy166II | GTNNAC | 4 cut(s) | 233, 789, 2210, 2446 |
| Hpy188III | TCNNGA | 8 cut(s) | 643, 676, 1346, 1371, 1505, 1905, 2228, 2640 |
| Hpy8I | GTNNAC | 4 cut(s) | 233, 789, 2210, 2446 |
| Hpy99I | CGWCG | 2 cut(s) | 1172, 2618 |
| HpyCH4III | ACNGT | 5 cut(s) | 700, 1059, 1762, 1941, 2267 |
| HpyCH4IV | ACGT | 2 cut(s) | 2365, 2663 |
| HpyF3I | CTNAG | 9 cut(s) | 822, 1112, 1530, 1542, 1653, 1914, 1968, 2111, 2599 |
| HpySE526I | ACGT | 2 cut(s) | 2365, 2663 |
| HspAI | GCGC | 2 cut(s) | 491, 1535 |
| Kpn2I | TCCGGA | 1 cut(s) | 675 |
| KroI | GCCGGC | 1 cut(s) | 2628 |
| KroNI | GCCGGC | 1 cut(s) | 2630 |
| Ksp22I | TGATCA | 1 cut(s) | 1615 |
| Kzo9I | GATC | 5 cut(s) | 967, 1363, 1615, 2035, 2420 |
| LmnI | GCTCC | 1 cut(s) | 117 |
| LweI | GCATC | 8 cut(s) | 173, 175, 681, 693, 1260, 1276, 1437, 1582 |
| MaeI | CTAG | 4 cut(s) | 813, 965, 1833, 2217 |
| MaeII | ACGT | 2 cut(s) | 2365, 2663 |
| MalI | GATC | 5 cut(s) | 969, 1365, 1617, 2037, 2422 |
| MboI | GATC | 5 cut(s) | 967, 1363, 1615, 2035, 2420 |
| MboII | GAAGA | 9 cut(s) | 3, 61, 926, 1547, 1635, 1845, 1886, 2241, 2456 |
| MfeI | CAATTG | 1 cut(s) | 1565 |
| MflI | RGATCY | 2 cut(s) | 967, 1363 |
| MhlI | GDGCHC | 2 cut(s) | 2012, 2174 |
| MlsI | TGGCCA | 2 cut(s) | 842, 1867 |
| MluNI | TGGCCA | 2 cut(s) | 842, 1867 |
| MlyI | GAGTC | 5 cut(s) | 620, 1059, 1645, 2081, 2630 |
| MmeI | TCCRAC | 2 cut(s) | 566, 2385 |
| Mox20I | TGGCCA | 2 cut(s) | 842, 1867 |
| Mph1103I | ATGCAT | 2 cut(s) | 255, 2151 |
| MroI | TCCGGA | 1 cut(s) | 675 |
| MroNI | GCCGGC | 1 cut(s) | 2628 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1583 |
| MscI | TGGCCA | 2 cut(s) | 842, 1867 |
| MseI | TTAA | 8 cut(s) | 500, 852, 1076, 1119, 1824, 1847, 2196, 2295 |
| MslI | CAYNNNNRTG | 4 cut(s) | 81, 258, 522, 1961 |
| Msp20I | TGGCCA | 2 cut(s) | 842, 1867 |
| MspA1I | CMGCKG | 4 cut(s) | 110, 446, 770, 2655 |
| MspCI | CTTAAG | 1 cut(s) | 1118 |
| MspI | CCGG | 7 cut(s) | 87, 439, 676, 1930, 2449, 2489, 2629 |
| MunI | CAATTG | 1 cut(s) | 1565 |
| Mva1269I | GAATGC | 1 cut(s) | 1233 |
| MvaI | CCWGG | 6 cut(s) | 38, 839, 1137, 1248, 1998, 2485 |
| NaeI | GCCGGC | 1 cut(s) | 2630 |
| NciI | CCSGG | 4 cut(s) | 440, 1930, 1931, 2450 |
| NcoI | CCATGG | 4 cut(s) | 415, 1127, 1222, 1265 |
| NdeII | GATC | 5 cut(s) | 967, 1363, 1615, 2035, 2420 |
| NgoMIV | GCCGGC | 1 cut(s) | 2628 |
| NheI | GCTAGC | 1 cut(s) | 812 |
| NlaIV | GGNNCC | 6 cut(s) | 91, 119, 554, 569, 1745, 2314 |
| NmuCI | GTSAC | 9 cut(s) | 143, 244, 401, 959, 1258, 1521, 1699, 2325, 2673 |
| NsiI | ATGCAT | 2 cut(s) | 255, 2151 |
| NspI | RCATGY | 5 cut(s) | 80, 257, 736, 889, 1318 |
| PaeI | GCATGC | 4 cut(s) | 80, 257, 736, 889 |
| PaeR7I | CTCGAG | 1 cut(s) | 2678 |
| PagI | TCATGA | 1 cut(s) | 2227 |
| PaqCI | CACCTGC | 1 cut(s) | 1827 |
| PceI | AGGCCT | 1 cut(s) | 2562 |
| PciI | ACATGT | 1 cut(s) | 1314 |
| PctI | GAATGC | 1 cut(s) | 1233 |
| PdiI | GCCGGC | 1 cut(s) | 2630 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1583 |
| PfeI | GAWTC | 8 cut(s) | 655, 917, 1022, 1469, 1627, 1733, 1808, 2231 |
| PflFI | GACNNNGTC | 1 cut(s) | 629 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1327 |
| PleI | GAGTC | 5 cut(s) | 620, 1058, 1645, 2080, 2630 |
| PpsI | GAGTC | 5 cut(s) | 620, 1058, 1645, 2080, 2630 |
| Ppu21I | YACGTR | 1 cut(s) | 2366 |
| PpuMI | RGGWCCY | 1 cut(s) | 2313 |
| PscI | ACATGT | 1 cut(s) | 1314 |
| PshBI | ATTAAT | 1 cut(s) | 1847 |
| PsiI | TTATAA | 2 cut(s) | 801, 2087 |
| Psp5II | RGGWCCY | 1 cut(s) | 2313 |
| Psp6I | CCWGG | 6 cut(s) | 36, 837, 1135, 1246, 1996, 2483 |
| PspGI | CCWGG | 6 cut(s) | 36, 837, 1135, 1246, 1996, 2483 |
| PspN4I | GGNNCC | 6 cut(s) | 91, 119, 554, 569, 1745, 2314 |
| PspPI | GGNCC | 5 cut(s) | 89, 553, 631, 1946, 2313 |
| PspPPI | RGGWCCY | 1 cut(s) | 2313 |
| PspXI | VCTCGAGB | 1 cut(s) | 2678 |
| PstI | CTGCAG | 4 cut(s) | 760, 1336, 1398, 2179 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2183 |
| PsuI | RGATCY | 2 cut(s) | 967, 1363 |
| PsyI | GACNNNGTC | 1 cut(s) | 629 |
| PvuII | CAGCTG | 2 cut(s) | 446, 770 |
| RsaI | GTAC | 5 cut(s) | 412, 848, 1319, 2032, 2209 |
| RsaNI | GTAC | 5 cut(s) | 411, 847, 1318, 2031, 2208 |
| RseI | CAYNNNNRTG | 4 cut(s) | 81, 258, 522, 1961 |
| SaqAI | TTAA | 8 cut(s) | 500, 852, 1076, 1119, 1824, 1847, 2196, 2295 |
| Sau3AI | GATC | 5 cut(s) | 967, 1363, 1615, 2035, 2420 |
| Sau96I | GGNCC | 5 cut(s) | 89, 553, 631, 1946, 2313 |
| SchI | GAGTC | 5 cut(s) | 620, 1059, 1645, 2081, 2630 |
| SduI | GDGCHC | 2 cut(s) | 2012, 2174 |
| SfaNI | GCATC | 8 cut(s) | 173, 175, 681, 693, 1260, 1276, 1437, 1582 |
| SfcI | CTRYAG | 5 cut(s) | 756, 1332, 1359, 1394, 2175 |
| Sfr274I | CTCGAG | 1 cut(s) | 2678 |
| SinI | GGWCC | 4 cut(s) | 89, 631, 1946, 2313 |
| SlaI | CTCGAG | 1 cut(s) | 2678 |
| SmaI | CCCGGG | 1 cut(s) | 1931 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 81, 258, 522, 1961 |
| SmlI | CTYRAG | 6 cut(s) | 138, 1118, 2040, 2638, 2647, 2678 |
| SmoI | CTYRAG | 6 cut(s) | 138, 1118, 2040, 2638, 2647, 2678 |
| SnaBI | TACGTA | 1 cut(s) | 2366 |
| SphI | GCATGC | 4 cut(s) | 80, 257, 736, 889 |
| SseBI | AGGCCT | 1 cut(s) | 2562 |
| SspMI | CTAG | 4 cut(s) | 813, 965, 1833, 2217 |
| StuI | AGGCCT | 1 cut(s) | 2562 |
| StyI | CCWWGG | 8 cut(s) | 415, 667, 806, 1127, 1174, 1222, 1265, 1495 |
| TaaI | ACNGT | 5 cut(s) | 700, 1059, 1762, 1941, 2267 |
| TaiI | ACGT | 2 cut(s) | 2368, 2666 |
| TaqI | TCGA | 2 cut(s) | 2565, 2679 |
| TaqII | GACCGA | 1 cut(s) | 619 |
| TatI | WGTACW | 1 cut(s) | 846 |
| TauI | GCSGC | 4 cut(s) | 164, 933, 1340, 1411 |
| TfiI | GAWTC | 8 cut(s) | 655, 917, 1022, 1469, 1627, 1733, 1808, 2231 |
| Tru1I | TTAA | 8 cut(s) | 500, 852, 1076, 1119, 1824, 1847, 2196, 2295 |
| Tru9I | TTAA | 8 cut(s) | 500, 852, 1076, 1119, 1824, 1847, 2196, 2295 |
| TscAI | CASTG | 6 cut(s) | 406, 1062, 1765, 1922, 2179, 2272 |
| TseFI | GTSAC | 9 cut(s) | 143, 244, 401, 959, 1258, 1521, 1699, 2325, 2673 |
| Tsp45I | GTSAC | 9 cut(s) | 143, 244, 401, 959, 1258, 1521, 1699, 2325, 2673 |
| TspGWI | ACGGA | 3 cut(s) | 774, 1086, 2656 |
| TspMI | CCCGGG | 1 cut(s) | 1929 |
| TspRI | CASTG | 6 cut(s) | 406, 1062, 1765, 1922, 2179, 2272 |
| Tth111I | GACNNNGTC | 1 cut(s) | 629 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1327 |
| Vha464I | CTTAAG | 1 cut(s) | 1118 |
| VpaK11BI | GGWCC | 4 cut(s) | 89, 631, 1946, 2313 |
| VspI | ATTAAT | 1 cut(s) | 1847 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1995, 2320 |
| XapI | RAATTY | 5 cut(s) | 61, 1183, 1579, 1972, 2287 |
| XceI | RCATGY | 5 cut(s) | 80, 257, 736, 889, 1318 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 178 |
| XhoI | CTCGAG | 1 cut(s) | 2678 |
| XmaI | CCCGGG | 1 cut(s) | 1929 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1583 |
| XspI | CTAG | 4 cut(s) | 813, 965, 1833, 2217 |
| Zsp2I | ATGCAT | 2 cut(s) | 255, 2151 |