Rh2DG521200

Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
74581502 .. 74587870
6369 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG521200.1

Sequence Viewer

Length: 2454 bp
ATGAGGCTTTCGTCTTCGTCTTCGTCTTCGGGGTTTAATAATCATCAGCCTCAGGAAGGGGAGAAGAAATGTTTGAATTCTGAGCTATGGCATGCGTGTGCGGGGCCTCTGGTGTCTCTGCCTGCTCTTGGTAGCCGCGTAGTCTACTTTCCGCAAGGTCACAGTGAGCAGGTTGCTGCATCAACCAATAAGGAAGTTGATGCCCATATTCCCAATTACCCAAACCTACCTCCACAACTAATTTGTCAACTTCACAATGTGACCATGCATGCCGATGTGGAGACGGATGAAGTATATGCTCAAATGACCCTGCAACCATTAAGTCCGGCCAGCCCAAGAGGCATCTTCTCACAACTGGATGGAGCGTGTTCGAATGAAAAGAATCAGTTGCTCTTGGGTATTCGGAGAGCAAATCGTCCGCAGACTGTTATGCCGTCGTCGGTTTTATCAAGCGATAGCATGCATATTGGTCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACAAATAGTCGGTTTACTATATTTTATAATCCAAGAGCAAGTCCTTCTGAATTTGTGATACCCCTGGCCAAGTATGTTAAAGCTGTCTATCATACACGTGTTTCTGTGGGAATGCGATTTAGGATGCTGTTTGAGACAGAAGAATCAAGTGTTCGCCGATACATGGGTACAATAACTGGCATCAGTGATTTAGATTCTGTTCGCTGGTCAAATTCACACTGGCGCTCTGTGAAGGTTGGCTGGGATGAATCCACTGCAGGGGAGAGGCAGCCAAGAGTTTCATTGTGGGAGATTGAACCGCTAACAACTTTTCCCATGTACCCTTCCCCATTCCCTCTCAGACTGAAGCGACCATGGCCATCGGGCATGCCCTCTTTCCATGCGCTCAAAGACGGTGATATGGGCCTGAATGCTCCACTGATGTGGCTCCAAGGAGGGGTTGGAGATCCAGGGATGCAATCTTTGAACTTCCAGGGATTTGGGGTTACGCCCTGGATGCAGCCACGGCTTGATGCTTCTATGGCAGGTCTACAACCTGATGTATACCAAGCAATGGCAGCTGCTGCACTTCAAGAAATGAGGGCAGTGGATGCAAAATGTTCTTCGCAGTCGCTTCTACCCTTCCAGCAATCTTCAAATGTTTCAAATGGGCCTACTGCTATGCTTCAGAGACATAGTTTACCTCAGTCTCAGTCTCAGAATACTTTTCTCCAGAGCTTTCAAGAAAACCAAGCTCCTGCTTCTCAGCTGTTGCAACAACAGTTGCGTTATCATCCATATAATAATGATCAGAGACAGCAGCAGCAGCATCATCAACAGCAGCTGCACCAGCAGCAGCAGCAGCAGCAGCTTCAACAGCAGCATCTTCAACAATCCCAGAATATGCACCAATTTTCTGTTCAGCAGCAGATTCCGAATGTAATGTCTTCTCTATCTAATTTTGCTACTCAATCTCAGTCTGCATCACTACAAGCTATTCCTTCACAAACTCAGCAGCAGAGCTTTCCGGAATCTGTTGGAAATGCTATATCTTCATCCGATGTTCCCCCTATACATAGCATATTAGGTTCACTATCGCAGGATGGAGCATCCCAGTTACTTAACTTGAGTGGATCCAACACTGGAATATCTTCTACTTTGTTACCCAAGGTTGAATCACAGCTATCATCTGGGGCTGCTCAATGTGTACTCCCCCAAGTGGATCAGTTGGGAACACCACAGTCAAATATCTCCGAGCTCACTGCCTTGCCTCCATTTCCTGGCAGAGAGTACTCTTTCCAAGGTGCTACTGATCCCCAGAGCAATCTTTTGTTTGGGGTTAACATTGATGCCTCATCTCTAATGCTACAGAATGGGATACCAAATCTGAGAAATATTGGCAGTGGAACTGATTCATTGTCTATGCCGTTCGGTGCTTCAAATTATACCAGTGCAACAGGCAATGATTATCCACTTAATTCAGATATGACTACTTCAAGTTGTGTAGATGAATCAGGCTTCTTGCCGTCTTCAGAAAATGTGGACCAAGTAAATCCACCAACTCGAACCTTTGTGAAGGTTCATAAGTCGGGGTCCTTTGGGAGGTCACTGGATATTTCAAAATTCAGCAGCTATGATGAGTTGCGCAGTGAGCTCGGAAGCATGTTTGGCCTTGAAGGCCAATTAGAGGATCCTCAGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGGGAGAATGATGTTCTTCTCCTTGGTGACGACCCTTGGCAGGAGTTTGTGAACAATGTTTGGTATATCAAGATACTTTCTCCGCTTGAAGTGCAACAAATGGGAAAGGAAGGCCTCAATCGTGTGGCTTCTGTCCCAAGCCAAAAGCTTTCCAATGGCAGCAATACCTGTGATGACTACGTGAGCCGACAGGACTTGAGAAATTCAAGCAATGGGATTGCATCGCTGGGCTCCCTTGACTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

817

Amino Acids

89.71

Weight (kDa)

5.61

Isoelectric Point (pI)

68.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARF_AD PF06507 185 - 268 1.5e-33 Auxin response factor ancillary domain
AUX_IAA PF02309 677 - 764 1.9e-06 AUX/IAA family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 528
Acc16I TGCGCA 1 cut(s) 2126
Acc36I ACCTGC 2 cut(s) 160, 1016
AccB7I CCANNNNNTGG 2 cut(s) 1054, 1760
AccI GTMKAC 3 cut(s) 144, 1030, 1044
AccII CGCG 1 cut(s) 138
AccIII TCCGGA 1 cut(s) 1507
AciI CCGC 6 cut(s) 101, 136, 152, 419, 800, 2291
AclWI GGATC 7 cut(s) 941, 1608, 1621, 1710, 1787, 2165, 2178
AcoI YGGCCR 3 cut(s) 327, 567, 857
AcsI RAATTY 5 cut(s) 76, 551, 712, 2102, 2410
AcuI CTGAAG 3 cut(s) 866, 1151, 1995
AcvI CACGTG 1 cut(s) 599
AdeI CACNNNGTG 1 cut(s) 259
AfaI GTAC 4 cut(s) 670, 821, 1689, 1772
AflIII ACRYGT 2 cut(s) 596, 598
AjnI CCWGG 5 cut(s) 564, 949, 972, 992, 1759
AjuI GAANNNNNNNTTGG 2 cut(s) 1383, 1415
AleI CACNNNNGTG 1 cut(s) 922
Alw21I GWGCWC 2 cut(s) 1740, 2136
Alw26I GTCTC 7 cut(s) 120, 275, 629, 1165, 1194, 1200, 1288
AlwI GGATC 7 cut(s) 941, 1608, 1621, 1710, 1787, 2165, 2178
AlwNI CAGNNNCTG 2 cut(s) 1064, 1324
Aor13HI TCCGGA 1 cut(s) 1507
AoxI GGCC 9 cut(s) 104, 327, 567, 857, 904, 1151, 2149, 2158, 2320
ApoI RAATTY 5 cut(s) 76, 551, 712, 2102, 2410
ArsI GACNNNNNNTTYG 2 cut(s) 1409, 1441
Asp700I GAANNNNTTC 2 cut(s) 1630, 1891
AspLEI GCGC 3 cut(s) 726, 886, 2127
AspS9I GGNCC 5 cut(s) 104, 904, 1151, 2023, 2073
AsuC2I CCSGG 1 cut(s) 2210
AsuHPI GGTGA 2 cut(s) 908, 2246
AsuII TTCGAA 1 cut(s) 371
AvaII GGWCC 2 cut(s) 2023, 2073
AxyI CCTNAGG 1 cut(s) 51
BaeI ACNNNNGTAYC 2 cut(s) 652, 685
BalI TGGCCA 2 cut(s) 569, 859
BamHI GGATCC 2 cut(s) 1613, 2170
BanII GRGCYC 3 cut(s) 1740, 2136, 2441
BbrPI CACGTG 1 cut(s) 599
BbsI GAAGAC 6 cut(s) 6, 12, 18, 464, 1419, 2001
Bbv12I GWGCWC 2 cut(s) 1740, 2136
BccI CCATC 3 cut(s) 353, 868, 1577
BceAI ACGGC 4 cut(s) 418, 1022, 1891, 1990
BcgI CGANNNNNNTGC 4 cut(s) 1724, 1758, 2116, 2150
BciT130I CCWGG 5 cut(s) 566, 951, 974, 994, 1761
BciVI GTATCC 1 cut(s) 1851
BclI TGATCA 1 cut(s) 1288
BcnI CCSGG 1 cut(s) 2210
BcoDI GTCTC 7 cut(s) 120, 275, 629, 1165, 1194, 1200, 1288
BfmI CTRYAG 3 cut(s) 483, 756, 1847
BfoI RGCGCY 1 cut(s) 727
BfuAI ACCTGC 2 cut(s) 160, 1016
BfuI GTATCC 1 cut(s) 1851
BglI GCCNNNNNGGC 2 cut(s) 339, 2157
BmcAI AGTACT 1 cut(s) 1772
Bme1390I CCNGG 6 cut(s) 566, 951, 974, 994, 1761, 2210
Bme18I GGWCC 2 cut(s) 2023, 2073
BmgT120I GGNCC 5 cut(s) 104, 904, 1151, 2023, 2073
BmiI GGNNCC 6 cut(s) 105, 929, 1615, 2074, 2172, 2440
BmrFI CCNGG 6 cut(s) 566, 951, 974, 994, 1761, 2210
BmrI ACTGGG 1 cut(s) 1588
BmuI ACTGGG 1 cut(s) 1588
BpiI GAAGAC 6 cut(s) 6, 12, 18, 464, 1419, 2001
BpmI CTGGAG 1 cut(s) 1196
Bpu14I TTCGAA 1 cut(s) 371
BpuEI CTTGAG 2 cut(s) 1627, 2425
BpuMI CCSGG 1 cut(s) 2210
BsaAI YACGTR 2 cut(s) 599, 2389
BsaWI WCCGGW 1 cut(s) 1507
Bse1I ACTGG 7 cut(s) 360, 682, 725, 1594, 1627, 1929, 2094
Bse21I CCTNAGG 1 cut(s) 51
Bse3DI GCAATG 3 cut(s) 1059, 1948, 2425
BseAI TCCGGA 1 cut(s) 1507
BseBI CCWGG 5 cut(s) 566, 951, 974, 994, 1761
BseMI GCAATG 3 cut(s) 1059, 1948, 2425
BseNI ACTGG 7 cut(s) 360, 682, 725, 1594, 1627, 1929, 2094
BseYI CCCAGC 2 cut(s) 741, 2434
BsgI GTGCAG 2 cut(s) 1050, 1310
Bsh1236I CGCG 1 cut(s) 138
BshFI GGCC 9 cut(s) 106, 329, 569, 859, 906, 1153, 2151, 2160, 2322
BsiHKAI GWGCWC 2 cut(s) 1740, 2136
BsiSI CCGG 3 cut(s) 326, 1508, 2209
BslFI GGGAC 1 cut(s) 2327
BsmAI GTCTC 7 cut(s) 120, 275, 629, 1165, 1194, 1200, 1288
BsmBI CGTCTC 1 cut(s) 275
BsmFI GGGAC 1 cut(s) 2327
BsmI GAATGC 2 cut(s) 618, 916
BsnI GGCC 9 cut(s) 106, 329, 569, 859, 906, 1153, 2151, 2160, 2322
Bsp119I TTCGAA 1 cut(s) 371
Bsp1286I GDGCHC 3 cut(s) 1740, 2136, 2441
Bsp13I TCCGGA 1 cut(s) 1507
Bsp143I GATC 7 cut(s) 946, 1288, 1613, 1702, 1792, 2170, 2180
Bsp19I CCATGG 1 cut(s) 854
BspACI CCGC 6 cut(s) 101, 136, 152, 419, 800, 2291
BspANI GGCC 9 cut(s) 106, 329, 569, 859, 906, 1153, 2151, 2160, 2322
BspEI TCCGGA 1 cut(s) 1507
BspFNI CGCG 1 cut(s) 138
BspLI GGNNCC 6 cut(s) 105, 929, 1615, 2074, 2172, 2440
BspMAI CTGCAG 2 cut(s) 487, 760
BspMI ACCTGC 2 cut(s) 160, 1016
BspPI GGATC 7 cut(s) 941, 1608, 1621, 1710, 1787, 2165, 2178
BspT104I TTCGAA 1 cut(s) 371
BsrDI GCAATG 3 cut(s) 1059, 1948, 2425
BsrI ACTGG 7 cut(s) 360, 682, 725, 1594, 1627, 1929, 2094
BssMI GATC 7 cut(s) 946, 1288, 1613, 1702, 1792, 2170, 2180
BssNAI GTATAC 1 cut(s) 1045
BssT1I CCWWGG 6 cut(s) 854, 931, 1647, 1780, 2230, 2243
Bst1107I GTATAC 1 cut(s) 1045
Bst2UI CCWGG 5 cut(s) 566, 951, 974, 994, 1761
Bst4CI ACNGT 5 cut(s) 164, 427, 896, 1263, 1722
BstAPI GCANNNNNTGC 3 cut(s) 491, 1064, 1091
BstBAI YACGTR 2 cut(s) 599, 2389
BstBI TTCGAA 1 cut(s) 371
BstC8I GCNNGC 7 cut(s) 93, 123, 270, 331, 461, 869, 2189
BstDSI CCRYGG 2 cut(s) 854, 1004
BstENI CCTNNNNNAGG 2 cut(s) 54, 2080
BstFNI CGCG 1 cut(s) 138
BstH2I RGCGCY 1 cut(s) 727
BstHHI GCGC 3 cut(s) 726, 886, 2127
BstKTI GATC 7 cut(s) 949, 1291, 1616, 1705, 1795, 2173, 2183
BstMAI GTCTC 7 cut(s) 120, 275, 629, 1165, 1194, 1200, 1288
BstMBI GATC 7 cut(s) 946, 1288, 1613, 1702, 1792, 2170, 2180
BstNI CCWGG 5 cut(s) 566, 951, 974, 994, 1761
BstNSI RCATGY 5 cut(s) 95, 272, 463, 871, 2146
BstSCI CCNGG 6 cut(s) 564, 949, 972, 992, 1759, 2208
BstSFI CTRYAG 3 cut(s) 483, 756, 1847
BstUI CGCG 1 cut(s) 138
BstV2I GAAGAC 6 cut(s) 6, 12, 18, 464, 1419, 2001
BstX2I RGATCY 3 cut(s) 946, 1613, 2170
BstXI CCANNNNNNTGG 2 cut(s) 924, 980
BstYI RGATCY 3 cut(s) 946, 1613, 2170
BstZ17I GTATAC 1 cut(s) 1045
Bsu36I CCTNAGG 1 cut(s) 51
BsuI GTATCC 1 cut(s) 1851
BsuRI GGCC 9 cut(s) 106, 329, 569, 859, 906, 1153, 2151, 2160, 2322
BtgI CCRYGG 2 cut(s) 854, 1004
BtgZI GCGATG 1 cut(s) 2415
BtsI GCAGTG 5 cut(s) 753, 1092, 1740, 1888, 2134
BveI ACCTGC 2 cut(s) 160, 1016
Cac8I GCNNGC 7 cut(s) 93, 123, 270, 331, 461, 869, 2189
CaiI CAGNNNCTG 2 cut(s) 1064, 1324
CfoI GCGC 3 cut(s) 726, 886, 2127
Cfr13I GGNCC 5 cut(s) 104, 904, 1151, 2023, 2073
Csp6I GTAC 4 cut(s) 669, 820, 1688, 1771
CviQI GTAC 4 cut(s) 669, 820, 1688, 1771
DpnI GATC 7 cut(s) 948, 1290, 1615, 1704, 1794, 2172, 2182
DpnII GATC 7 cut(s) 946, 1288, 1613, 1702, 1792, 2170, 2180
DraIII CACNNNGTG 1 cut(s) 259
EaeI YGGCCR 3 cut(s) 327, 567, 857
Ecl136II GAGCTC 2 cut(s) 1738, 2134
Eco130I CCWWGG 6 cut(s) 854, 931, 1647, 1780, 2230, 2243
Eco147I AGGCCT 1 cut(s) 2322
Eco24I GRGCYC 3 cut(s) 1740, 2136, 2441
Eco47I GGWCC 2 cut(s) 2023, 2073
Eco53kI GAGCTC 2 cut(s) 1738, 2134
Eco57I CTGAAG 3 cut(s) 866, 1151, 1995
Eco72I CACGTG 1 cut(s) 599
Eco81I CCTNAGG 1 cut(s) 51
EcoICRI GAGCTC 2 cut(s) 1738, 2134
EcoNI CCTNNNNNAGG 2 cut(s) 54, 2080
EcoO109I RGGNCCY 2 cut(s) 104, 2073
EcoRI GAATTC 1 cut(s) 76
EcoRII CCWGG 5 cut(s) 564, 949, 972, 992, 1759
EcoT14I CCWWGG 6 cut(s) 854, 931, 1647, 1780, 2230, 2243
EcoT22I ATGCAT 2 cut(s) 270, 465
EcoT38I GRGCYC 3 cut(s) 1740, 2136, 2441
ErhI CCWWGG 6 cut(s) 854, 931, 1647, 1780, 2230, 2243
Esp3I CGTCTC 1 cut(s) 275
FaqI GGGAC 1 cut(s) 2327
FauI CCCGC 1 cut(s) 94
FbaI TGATCA 1 cut(s) 1288
FblI GTMKAC 3 cut(s) 144, 1030, 1044
FriOI GRGCYC 3 cut(s) 1740, 2136, 2441
FspI TGCGCA 1 cut(s) 2126
GlaI GCGC 3 cut(s) 725, 885, 2126
GsaI CCCAGC 2 cut(s) 745, 2438
GsuI CTGGAG 1 cut(s) 1196
HaeII RGCGCY 1 cut(s) 727
HaeIII GGCC 9 cut(s) 106, 329, 569, 859, 906, 1153, 2151, 2160, 2322
HapII CCGG 3 cut(s) 326, 1508, 2209
HhaI GCGC 3 cut(s) 726, 886, 2127
Hin6I GCGC 3 cut(s) 724, 884, 2125
HinP1I GCGC 3 cut(s) 724, 884, 2125
HincII GTYRAC 3 cut(s) 248, 1822, 2206
HindII GTYRAC 3 cut(s) 248, 1822, 2206
HindIII AAGCTT 1 cut(s) 2354
HinfI GANTC 9 cut(s) 382, 644, 695, 749, 1411, 1511, 1655, 1892, 1991
HpaI GTTAAC 1 cut(s) 1822
HpaII CCGG 3 cut(s) 326, 1508, 2209
HphI GGTGA 2 cut(s) 908, 2246
Hpy188III TCNNGA 6 cut(s) 53, 1073, 1213, 1223, 1508, 2278
Hpy99I CGWCG 2 cut(s) 439, 442
HpyAV CCTTC 9 cut(s) 50, 555, 727, 834, 1132, 1491, 2050, 2150, 2312
HpyCH4III ACNGT 5 cut(s) 164, 427, 896, 1263, 1722
HpyCH4IV ACGT 2 cut(s) 598, 2388
HpySE526I ACGT 2 cut(s) 598, 2388
HspAI GCGC 3 cut(s) 724, 884, 2125
Kpn2I TCCGGA 1 cut(s) 1507
Ksp22I TGATCA 1 cut(s) 1288
KspAI GTTAAC 1 cut(s) 1822
Kzo9I GATC 7 cut(s) 946, 1288, 1613, 1702, 1792, 2170, 2180
LmnI GCTCC 6 cut(s) 362, 919, 933, 1240, 1586, 2444
MaeII ACGT 2 cut(s) 598, 2388
MaeIII GTNAC 7 cut(s) 158, 259, 985, 1596, 1641, 2085, 2234
MalI GATC 7 cut(s) 948, 1290, 1615, 1704, 1794, 2172, 2182
MboI GATC 7 cut(s) 946, 1288, 1613, 1702, 1792, 2170, 2180
MflI RGATCY 3 cut(s) 946, 1613, 2170
MhlI GDGCHC 3 cut(s) 1740, 2136, 2441
MlsI TGGCCA 2 cut(s) 569, 859
MluNI TGGCCA 2 cut(s) 569, 859
MmeI TCCRAC 3 cut(s) 922, 1498, 1641
Mox20I TGGCCA 2 cut(s) 569, 859
Mph1103I ATGCAT 2 cut(s) 270, 465
MroI TCCGGA 1 cut(s) 1507
MroXI GAANNNNTTC 2 cut(s) 1630, 1891
MscI TGGCCA 2 cut(s) 569, 859
MseI TTAA 6 cut(s) 36, 320, 579, 1602, 1821, 1956
MslI CAYNNNNRTG 4 cut(s) 96, 273, 597, 922
Msp20I TGGCCA 2 cut(s) 569, 859
MspA1I CMGCKG 4 cut(s) 497, 1061, 1249, 1324
MspI CCGG 3 cut(s) 326, 1508, 2209
MspR9I CCNGG 6 cut(s) 566, 951, 974, 994, 1761, 2210
Mva1269I GAATGC 2 cut(s) 618, 916
MvaI CCWGG 5 cut(s) 566, 951, 974, 994, 1761
MvnI CGCG 1 cut(s) 138
NciI CCSGG 1 cut(s) 2210
NcoI CCATGG 1 cut(s) 854
NdeII GATC 7 cut(s) 946, 1288, 1613, 1702, 1792, 2170, 2180
NlaIV GGNNCC 6 cut(s) 105, 929, 1615, 2074, 2172, 2440
NmuCI GTSAC 4 cut(s) 158, 259, 2085, 2234
NsbI TGCGCA 1 cut(s) 2126
NsiI ATGCAT 2 cut(s) 270, 465
NspI RCATGY 5 cut(s) 95, 272, 463, 871, 2146
NspV TTCGAA 1 cut(s) 371
OliI CACNNNNGTG 1 cut(s) 922
PaeI GCATGC 4 cut(s) 95, 272, 463, 871
PceI AGGCCT 1 cut(s) 2322
PctI GAATGC 2 cut(s) 618, 916
PdmI GAANNNNTTC 2 cut(s) 1630, 1891
PfeI GAWTC 9 cut(s) 382, 644, 695, 749, 1411, 1511, 1655, 1892, 1991
PflMI CCANNNNNTGG 2 cut(s) 1054, 1760
PmaCI CACGTG 1 cut(s) 599
PmlI CACGTG 1 cut(s) 599
Ppu21I YACGTR 2 cut(s) 599, 2389
PpuMI RGGWCCY 1 cut(s) 2073
PsiI TTATAA 1 cut(s) 528
Psp124BI GAGCTC 2 cut(s) 1740, 2136
Psp5II RGGWCCY 1 cut(s) 2073
Psp6I CCWGG 5 cut(s) 564, 949, 972, 992, 1759
PspCI CACGTG 1 cut(s) 599
PspFI CCCAGC 2 cut(s) 741, 2434
PspGI CCWGG 5 cut(s) 564, 949, 972, 992, 1759
PspN4I GGNNCC 6 cut(s) 105, 929, 1615, 2074, 2172, 2440
PspPI GGNCC 5 cut(s) 104, 904, 1151, 2023, 2073
PspPPI RGGWCCY 1 cut(s) 2073
PstI CTGCAG 2 cut(s) 487, 760
PstNI CAGNNNCTG 2 cut(s) 1064, 1324
PsuI RGATCY 3 cut(s) 946, 1613, 2170
PvuII CAGCTG 4 cut(s) 497, 1061, 1249, 1324
RsaI GTAC 4 cut(s) 670, 821, 1689, 1772
RsaNI GTAC 4 cut(s) 669, 820, 1688, 1771
RseI CAYNNNNRTG 4 cut(s) 96, 273, 597, 922
SacI GAGCTC 2 cut(s) 1740, 2136
SaqAI TTAA 6 cut(s) 36, 320, 579, 1602, 1821, 1956
Sau3AI GATC 7 cut(s) 946, 1288, 1613, 1702, 1792, 2170, 2180
Sau96I GGNCC 5 cut(s) 104, 904, 1151, 2023, 2073
ScaI AGTACT 1 cut(s) 1772
ScrFI CCNGG 6 cut(s) 566, 951, 974, 994, 1761, 2210
SduI GDGCHC 3 cut(s) 1740, 2136, 2441
SfcI CTRYAG 3 cut(s) 483, 756, 1847
SfiI GGCCNNNNNGGCC 1 cut(s) 2157
SfuI TTCGAA 1 cut(s) 371
SinI GGWCC 2 cut(s) 2023, 2073
SmiMI CAYNNNNRTG 4 cut(s) 96, 273, 597, 922
SmlI CTYRAG 2 cut(s) 1606, 2404
SmoI CTYRAG 2 cut(s) 1606, 2404
SphI GCATGC 4 cut(s) 95, 272, 463, 871
SseBI AGGCCT 1 cut(s) 2322
SsiI CCGC 6 cut(s) 101, 136, 152, 419, 800, 2291
SspI AATATT 1 cut(s) 1876
SstI GAGCTC 2 cut(s) 1740, 2136
StuI AGGCCT 1 cut(s) 2322
StyD4I CCNGG 6 cut(s) 564, 949, 972, 992, 1759, 2208
StyI CCWWGG 6 cut(s) 854, 931, 1647, 1780, 2230, 2243
TaaI ACNGT 5 cut(s) 164, 427, 896, 1263, 1722
TaiI ACGT 2 cut(s) 601, 2391
TaqI TCGA 2 cut(s) 371, 2044
TatI WGTACW 2 cut(s) 1687, 1770
TauI GCSGC 1 cut(s) 138
TfiI GAWTC 9 cut(s) 382, 644, 695, 749, 1411, 1511, 1655, 1892, 1991
Tru1I TTAA 6 cut(s) 36, 320, 579, 1602, 1821, 1956
Tru9I TTAA 6 cut(s) 36, 320, 579, 1602, 1821, 1956
TseFI GTSAC 4 cut(s) 158, 259, 2085, 2234
Tsp45I GTSAC 4 cut(s) 158, 259, 2085, 2234
TspDTI ATGAA 8 cut(s) 303, 390, 762, 771, 1524, 1884, 2004, 2051
TspGWI ACGGA 1 cut(s) 299
Van91I CCANNNNNTGG 2 cut(s) 1054, 1760
VpaK11BI GGWCC 2 cut(s) 2023, 2073
XagI CCTNNNNNAGG 2 cut(s) 54, 2080
XapI RAATTY 5 cut(s) 76, 551, 712, 2102, 2410
XceI RCATGY 5 cut(s) 95, 272, 463, 871, 2146
XcmI CCANNNNNNNNNTGG 1 cut(s) 938
XmiI GTMKAC 3 cut(s) 144, 1030, 1044
XmnI GAANNNNTTC 2 cut(s) 1630, 1891
ZrmI AGTACT 1 cut(s) 1772
Zsp2I ATGCAT 2 cut(s) 270, 465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.