Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 99 |
| AarI | CACCTGC | 1 cut(s) | 852 |
| Acc36I | ACCTGC | 3 cut(s) | 714, 852, 1113 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 625, 1568 |
| AccBSI | CCGCTC | 1 cut(s) | 1166 |
| AciI | CCGC | 6 cut(s) | 51, 226, 229, 421, 1166, 1238 |
| AclWI | GGATC | 3 cut(s) | 656, 1316, 1969 |
| AcoI | YGGCCR | 5 cut(s) | 138, 422, 428, 1151, 1772 |
| AcsI | RAATTY | 2 cut(s) | 1573, 1933 |
| AcuI | CTGAAG | 3 cut(s) | 626, 1521, 1880 |
| AfaI | GTAC | 3 cut(s) | 146, 617, 1973 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 235, 330, 625, 1283, 1284, 1568, 1608, 1774 |
| AflII | CTTAAG | 1 cut(s) | 416 |
| AflIII | ACRYGT | 1 cut(s) | 612 |
| AgsI | TTSAA | 8 cut(s) | 72, 206, 368, 788, 797, 1023, 1175, 1682 |
| AjiI | CACGTC | 1 cut(s) | 990 |
| AjnI | CCWGG | 6 cut(s) | 135, 433, 618, 1215, 1282, 1769 |
| AleI | CACNNNNGTG | 1 cut(s) | 493 |
| AluBI | AGCT | 9 cut(s) | 59, 68, 329, 895, 1011, 1638, 1648, 1660, 1720 |
| AluI | AGCT | 9 cut(s) | 59, 68, 329, 895, 1011, 1638, 1648, 1660, 1720 |
| Alw21I | GWGCWC | 2 cut(s) | 1298, 1460 |
| Alw26I | GTCTC | 4 cut(s) | 510, 768, 931, 1073 |
| AlwI | GGATC | 3 cut(s) | 656, 1316, 1969 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1469 |
| Ama87I | CYCGRG | 3 cut(s) | 1757, 1927, 1967 |
| ApoI | RAATTY | 2 cut(s) | 1573, 1933 |
| AseI | ATTAAT | 1 cut(s) | 1133 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1126, 1179 |
| AspS9I | GGNCC | 5 cut(s) | 654, 1232, 1549, 1599, 1696 |
| AsuHPI | GGTGA | 4 cut(s) | 79, 960, 1356, 1806 |
| AvaI | CYCGRG | 3 cut(s) | 1757, 1927, 1967 |
| AvaII | GGWCC | 3 cut(s) | 1232, 1599, 1696 |
| AxyI | CCTNAGG | 1 cut(s) | 410 |
| BalI | TGGCCA | 3 cut(s) | 140, 430, 1153 |
| Bbv12I | GWGCWC | 2 cut(s) | 1298, 1460 |
| BccI | CCATC | 9 cut(s) | 124, 403, 745, 813, 979, 1055, 1162, 1256, 1341 |
| BceAI | ACGGC | 1 cut(s) | 641 |
| BciT130I | CCWGG | 6 cut(s) | 137, 435, 620, 1217, 1284, 1771 |
| BciVI | GTATCC | 1 cut(s) | 402 |
| BclI | TGATCA | 1 cut(s) | 901 |
| BcoDI | GTCTC | 4 cut(s) | 510, 768, 931, 1073 |
| BfaI | CTAG | 4 cut(s) | 111, 263, 1119, 1850 |
| BfmI | CTRYAG | 5 cut(s) | 54, 692, 845, 1461, 1529 |
| BfrI | CTTAAG | 1 cut(s) | 416 |
| BfuAI | ACCTGC | 3 cut(s) | 714, 852, 1113 |
| BfuI | GTATCC | 1 cut(s) | 402 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1683 |
| BmcAI | AGTACT | 1 cut(s) | 1973 |
| Bme1390I | CCNGG | 6 cut(s) | 137, 435, 620, 1217, 1284, 1771 |
| Bme18I | GGWCC | 3 cut(s) | 1232, 1599, 1696 |
| BmeT110I | CYCGRG | 3 cut(s) | 1757, 1927, 1967 |
| BmgBI | CACGTC | 1 cut(s) | 990 |
| BmgT120I | GGNCC | 5 cut(s) | 654, 1232, 1549, 1599, 1696 |
| BmiI | GGNNCC | 5 cut(s) | 241, 1031, 1233, 1600, 1698 |
| BmrFI | CCNGG | 6 cut(s) | 137, 435, 620, 1217, 1284, 1771 |
| BmrI | ACTGGG | 1 cut(s) | 958 |
| BmsI | GCATC | 7 cut(s) | 186, 256, 558, 574, 729, 859, 1809 |
| BmuI | ACTGGG | 1 cut(s) | 958 |
| BpmI | CTGGAG | 2 cut(s) | 534, 1212 |
| Bpu10I | CCTNAGC | 1 cut(s) | 473 |
| BsaI | GGTCTC | 1 cut(s) | 510 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 235, 330, 625, 1283, 1284, 1568, 1608, 1774 |
| Bse118I | RCCGGY | 1 cut(s) | 1917 |
| Bse1I | ACTGG | 6 cut(s) | 253, 296, 457, 517, 964, 1503 |
| Bse21I | CCTNAGG | 1 cut(s) | 410 |
| Bse3DI | GCAATG | 1 cut(s) | 1268 |
| BseBI | CCWGG | 6 cut(s) | 137, 435, 620, 1217, 1284, 1771 |
| BseGI | GGATG | 6 cut(s) | 8, 201, 573, 1096, 1392, 1768 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 235, 330, 625, 1283, 1284, 1568, 1608, 1774 |
| BseMI | GCAATG | 1 cut(s) | 1268 |
| BseMII | CTCAG | 3 cut(s) | 836, 848, 1268 |
| BseNI | ACTGG | 6 cut(s) | 253, 296, 457, 517, 964, 1503 |
| BseRI | GAGGAG | 4 cut(s) | 519, 1361, 1416, 1745 |
| BseYI | CCCAGC | 3 cut(s) | 312, 329, 719 |
| BsgI | GTGCAG | 1 cut(s) | 1847 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1298, 1460 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1757, 1927, 1967 |
| BsiSI | CCGG | 3 cut(s) | 1775, 1887, 1918 |
| BslFI | GGGAC | 6 cut(s) | 54, 329, 337, 670, 1245, 1853 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 235, 330, 625, 1283, 1284, 1568, 1608, 1774 |
| BsmAI | GTCTC | 4 cut(s) | 510, 768, 931, 1073 |
| BsmFI | GGGAC | 6 cut(s) | 54, 329, 337, 670, 1245, 1853 |
| Bso31I | GGTCTC | 1 cut(s) | 510 |
| BsoBI | CYCGRG | 3 cut(s) | 1757, 1927, 1967 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1298, 1460 |
| Bsp143I | GATC | 6 cut(s) | 661, 901, 1321, 1706, 1732, 1961 |
| Bsp19I | CCATGG | 2 cut(s) | 425, 563 |
| BspACI | CCGC | 6 cut(s) | 51, 226, 229, 421, 1166, 1238 |
| BspCNI | CTCAG | 3 cut(s) | 835, 847, 1267 |
| BspLI | GGNNCC | 5 cut(s) | 241, 1031, 1233, 1600, 1698 |
| BspMAI | CTGCAG | 4 cut(s) | 58, 696, 849, 1533 |
| BspMI | ACCTGC | 3 cut(s) | 714, 852, 1113 |
| BspPI | GGATC | 3 cut(s) | 656, 1316, 1969 |
| BspTI | CTTAAG | 1 cut(s) | 416 |
| BspTNI | GGTCTC | 1 cut(s) | 510 |
| BsrBI | CCGCTC | 1 cut(s) | 1166 |
| BsrDI | GCAATG | 1 cut(s) | 1268 |
| BsrFI | RCCGGY | 1 cut(s) | 1917 |
| BsrI | ACTGG | 6 cut(s) | 253, 296, 457, 517, 964, 1503 |
| BssAI | RCCGGY | 1 cut(s) | 1917 |
| BssMI | GATC | 6 cut(s) | 661, 901, 1321, 1706, 1732, 1961 |
| BssT1I | CCWWGG | 4 cut(s) | 104, 425, 563, 575 |
| Bst2UI | CCWGG | 6 cut(s) | 137, 435, 620, 1217, 1284, 1771 |
| Bst4CI | ACNGT | 2 cut(s) | 521, 1227 |
| Bst6I | CTCTTC | 2 cut(s) | 934, 1185 |
| BstAFI | CTTAAG | 1 cut(s) | 416 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 62, 856 |
| BstC8I | GCNNGC | 7 cut(s) | 32, 185, 1151, 1164, 1662, 1715, 1919 |
| BstDEI | CTNAG | 7 cut(s) | 410, 473, 822, 834, 1158, 1254, 1397 |
| BstDSI | CCRYGG | 3 cut(s) | 425, 520, 563 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1606 |
| BstF5I | GGATG | 6 cut(s) | 8, 201, 573, 1096, 1392, 1768 |
| BstKTI | GATC | 6 cut(s) | 664, 904, 1324, 1709, 1735, 1964 |
| BstMAI | GTCTC | 4 cut(s) | 510, 768, 931, 1073 |
| BstMBI | GATC | 6 cut(s) | 661, 901, 1321, 1706, 1732, 1961 |
| BstNI | CCWGG | 6 cut(s) | 137, 435, 620, 1217, 1284, 1771 |
| BstNSI | RCATGY | 4 cut(s) | 34, 187, 616, 1117 |
| BstSCI | CCNGG | 6 cut(s) | 135, 433, 618, 1215, 1282, 1769 |
| BstSFI | CTRYAG | 5 cut(s) | 54, 692, 845, 1461, 1529 |
| BstX2I | RGATCY | 1 cut(s) | 661 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 495 |
| BstYI | RGATCY | 1 cut(s) | 661 |
| Bsu36I | CCTNAGG | 1 cut(s) | 410 |
| BsuI | GTATCC | 1 cut(s) | 402 |
| BtgI | CCRYGG | 3 cut(s) | 425, 520, 563 |
| BtrI | CACGTC | 1 cut(s) | 990 |
| BtsCI | GGATG | 6 cut(s) | 8, 201, 573, 1096, 1392, 1768 |
| BtsI | GCAGTG | 1 cut(s) | 1948 |
| BtsIMutI | CAGTG | 2 cut(s) | 289, 1948 |
| BveI | ACCTGC | 3 cut(s) | 714, 852, 1113 |
| Cac8I | GCNNGC | 7 cut(s) | 32, 185, 1151, 1164, 1662, 1715, 1919 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1469 |
| Cfr10I | RCCGGY | 1 cut(s) | 1917 |
| Cfr13I | GGNCC | 5 cut(s) | 654, 1232, 1549, 1599, 1696 |
| Csp6I | GTAC | 3 cut(s) | 145, 616, 1972 |
| CviQI | GTAC | 3 cut(s) | 145, 616, 1972 |
| DdeI | CTNAG | 7 cut(s) | 410, 473, 822, 834, 1158, 1254, 1397 |
| DpnI | GATC | 6 cut(s) | 663, 903, 1323, 1708, 1734, 1963 |
| DpnII | GATC | 6 cut(s) | 661, 901, 1321, 1706, 1732, 1961 |
| EaeI | YGGCCR | 5 cut(s) | 138, 422, 428, 1151, 1772 |
| Eam1104I | CTCTTC | 2 cut(s) | 934, 1185 |
| EarI | CTCTTC | 2 cut(s) | 934, 1185 |
| EciI | GGCGGA | 1 cut(s) | 215 |
| Eco130I | CCWWGG | 4 cut(s) | 104, 425, 563, 575 |
| Eco147I | AGGCCT | 1 cut(s) | 1848 |
| Eco31I | GGTCTC | 1 cut(s) | 510 |
| Eco47I | GGWCC | 3 cut(s) | 1232, 1599, 1696 |
| Eco57I | CTGAAG | 3 cut(s) | 626, 1521, 1880 |
| Eco81I | CCTNAGG | 1 cut(s) | 410 |
| Eco88I | CYCGRG | 3 cut(s) | 1757, 1927, 1967 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1606 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1232, 1599, 1696 |
| EcoRII | CCWGG | 6 cut(s) | 135, 433, 618, 1215, 1282, 1769 |
| EcoT14I | CCWWGG | 4 cut(s) | 104, 425, 563, 575 |
| ErhI | CCWWGG | 4 cut(s) | 104, 425, 563, 575 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 456, 488 |
| FaqI | GGGAC | 6 cut(s) | 54, 329, 337, 670, 1245, 1853 |
| FbaI | TGATCA | 1 cut(s) | 901 |
| FokI | GGATG | 5 cut(s) | 208, 580, 1103, 1399, 1775 |
| FspBI | CTAG | 4 cut(s) | 111, 263, 1119, 1850 |
| GsaI | CCCAGC | 3 cut(s) | 316, 333, 723 |
| GsuI | CTGGAG | 2 cut(s) | 534, 1212 |
| HapII | CCGG | 3 cut(s) | 1775, 1887, 1918 |
| HincII | GTYRAC | 1 cut(s) | 1001 |
| HindII | GTYRAC | 1 cut(s) | 1001 |
| HpaII | CCGG | 3 cut(s) | 1775, 1887, 1918 |
| HphI | GGTGA | 4 cut(s) | 79, 960, 1356, 1806 |
| Hpy166II | GTNNAC | 2 cut(s) | 1001, 1588 |
| Hpy188I | TCNGA | 7 cut(s) | 121, 537, 825, 1018, 1257, 1540, 1860 |
| Hpy188III | TCNNGA | 6 cut(s) | 644, 797, 1191, 1606, 1736, 1929 |
| Hpy8I | GTNNAC | 2 cut(s) | 1001, 1588 |
| HpyCH4III | ACNGT | 2 cut(s) | 521, 1227 |
| HpyCH4IV | ACGT | 3 cut(s) | 683, 989, 1545 |
| HpyF3I | CTNAG | 7 cut(s) | 410, 473, 822, 834, 1158, 1254, 1397 |
| HpySE526I | ACGT | 3 cut(s) | 683, 989, 1545 |
| KroI | GCCGGC | 1 cut(s) | 1917 |
| KroNI | GCCGGC | 1 cut(s) | 1919 |
| Ksp22I | TGATCA | 1 cut(s) | 901 |
| Kzo9I | GATC | 6 cut(s) | 661, 901, 1321, 1706, 1732, 1961 |
| LweI | GCATC | 7 cut(s) | 186, 256, 558, 574, 729, 859, 1809 |
| MaeI | CTAG | 4 cut(s) | 111, 263, 1119, 1850 |
| MaeII | ACGT | 3 cut(s) | 683, 989, 1545 |
| MaeIII | GTNAC | 7 cut(s) | 257, 556, 813, 878, 966, 990, 1492 |
| MalI | GATC | 6 cut(s) | 663, 903, 1323, 1708, 1734, 1963 |
| MbiI | CCGCTC | 1 cut(s) | 1166 |
| MboI | GATC | 6 cut(s) | 661, 901, 1321, 1706, 1732, 1961 |
| MboII | GAAGA | 8 cut(s) | 476, 921, 1089, 1134, 1172, 1202, 1353, 1742 |
| MfeI | CAATTG | 2 cut(s) | 854, 1170 |
| MflI | RGATCY | 1 cut(s) | 661 |
| MhlI | GDGCHC | 2 cut(s) | 1298, 1460 |
| MlsI | TGGCCA | 3 cut(s) | 140, 430, 1153 |
| MluCI | AATT | 7 cut(s) | 283, 854, 1126, 1170, 1447, 1573, 1933 |
| MluNI | TGGCCA | 3 cut(s) | 140, 430, 1153 |
| MlyI | GAGTC | 4 cut(s) | 770, 820, 1075, 1919 |
| MmeI | TCCRAC | 3 cut(s) | 854, 1125, 1671 |
| Mox20I | TGGCCA | 3 cut(s) | 140, 430, 1153 |
| MroNI | GCCGGC | 1 cut(s) | 1917 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1126, 1179 |
| MscI | TGGCCA | 3 cut(s) | 140, 430, 1153 |
| MseI | TTAA | 5 cut(s) | 150, 374, 417, 1133, 1581 |
| MslI | CAYNNNNRTG | 1 cut(s) | 493 |
| Msp20I | TGGCCA | 3 cut(s) | 140, 430, 1153 |
| MspA1I | CMGCKG | 2 cut(s) | 53, 329 |
| MspCI | CTTAAG | 1 cut(s) | 416 |
| MspI | CCGG | 3 cut(s) | 1775, 1887, 1918 |
| MspR9I | CCNGG | 6 cut(s) | 137, 435, 620, 1217, 1284, 1771 |
| MunI | CAATTG | 2 cut(s) | 854, 1170 |
| MvaI | CCWGG | 6 cut(s) | 137, 435, 620, 1217, 1284, 1771 |
| NaeI | GCCGGC | 1 cut(s) | 1919 |
| NcoI | CCATGG | 2 cut(s) | 425, 563 |
| NdeII | GATC | 6 cut(s) | 661, 901, 1321, 1706, 1732, 1961 |
| NgoMIV | GCCGGC | 1 cut(s) | 1917 |
| NlaIV | GGNNCC | 5 cut(s) | 241, 1031, 1233, 1600, 1698 |
| NmuCI | GTSAC | 5 cut(s) | 257, 556, 813, 966, 990 |
| NspI | RCATGY | 4 cut(s) | 34, 187, 616, 1117 |
| OliI | CACNNNNGTG | 1 cut(s) | 493 |
| PaeI | GCATGC | 2 cut(s) | 34, 187 |
| PaeR7I | CTCGAG | 2 cut(s) | 1927, 1967 |
| PaqCI | CACCTGC | 1 cut(s) | 852 |
| PceI | AGGCCT | 1 cut(s) | 1848 |
| PciI | ACATGT | 1 cut(s) | 612 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 680 |
| PdiI | GCCGGC | 1 cut(s) | 1919 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1126, 1179 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 625, 1568 |
| PleI | GAGTC | 4 cut(s) | 769, 820, 1074, 1919 |
| PpsI | GAGTC | 4 cut(s) | 769, 820, 1074, 1919 |
| PpuMI | RGGWCCY | 3 cut(s) | 1232, 1599, 1696 |
| PscI | ACATGT | 1 cut(s) | 612 |
| PshBI | ATTAAT | 1 cut(s) | 1133 |
| PsiI | TTATAA | 1 cut(s) | 99 |
| Psp5II | RGGWCCY | 3 cut(s) | 1232, 1599, 1696 |
| Psp6I | CCWGG | 6 cut(s) | 135, 433, 618, 1215, 1282, 1769 |
| PspFI | CCCAGC | 3 cut(s) | 312, 329, 719 |
| PspGI | CCWGG | 6 cut(s) | 135, 433, 618, 1215, 1282, 1769 |
| PspN4I | GGNNCC | 5 cut(s) | 241, 1031, 1233, 1600, 1698 |
| PspPI | GGNCC | 5 cut(s) | 654, 1232, 1549, 1599, 1696 |
| PspPPI | RGGWCCY | 3 cut(s) | 1232, 1599, 1696 |
| PspXI | VCTCGAGB | 1 cut(s) | 1967 |
| PstI | CTGCAG | 4 cut(s) | 58, 696, 849, 1533 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1469 |
| PsuI | RGATCY | 1 cut(s) | 661 |
| PvuII | CAGCTG | 1 cut(s) | 329 |
| RsaI | GTAC | 3 cut(s) | 146, 617, 1973 |
| RsaNI | GTAC | 3 cut(s) | 145, 616, 1972 |
| RseI | CAYNNNNRTG | 1 cut(s) | 493 |
| SaqAI | TTAA | 5 cut(s) | 150, 374, 417, 1133, 1581 |
| Sau3AI | GATC | 6 cut(s) | 661, 901, 1321, 1706, 1732, 1961 |
| Sau96I | GGNCC | 5 cut(s) | 654, 1232, 1549, 1599, 1696 |
| ScaI | AGTACT | 1 cut(s) | 1973 |
| SchI | GAGTC | 4 cut(s) | 770, 820, 1075, 1919 |
| ScrFI | CCNGG | 6 cut(s) | 137, 435, 620, 1217, 1284, 1771 |
| SduI | GDGCHC | 2 cut(s) | 1298, 1460 |
| SfaNI | GCATC | 7 cut(s) | 186, 256, 558, 574, 729, 859, 1809 |
| SfcI | CTRYAG | 5 cut(s) | 54, 692, 845, 1461, 1529 |
| Sfr274I | CTCGAG | 2 cut(s) | 1927, 1967 |
| SinI | GGWCC | 3 cut(s) | 1232, 1599, 1696 |
| SlaI | CTCGAG | 2 cut(s) | 1927, 1967 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 493 |
| SmlI | CTYRAG | 3 cut(s) | 416, 1927, 1967 |
| SmoI | CTYRAG | 3 cut(s) | 416, 1927, 1967 |
| SphI | GCATGC | 2 cut(s) | 34, 187 |
| Sse9I | AATT | 7 cut(s) | 283, 854, 1126, 1170, 1447, 1573, 1933 |
| SseBI | AGGCCT | 1 cut(s) | 1848 |
| SsiI | CCGC | 6 cut(s) | 51, 226, 229, 421, 1166, 1238 |
| SspMI | CTAG | 4 cut(s) | 111, 263, 1119, 1850 |
| StuI | AGGCCT | 1 cut(s) | 1848 |
| StyD4I | CCNGG | 6 cut(s) | 135, 433, 618, 1215, 1282, 1769 |
| StyI | CCWWGG | 4 cut(s) | 104, 425, 563, 575 |
| TaaI | ACNGT | 2 cut(s) | 521, 1227 |
| TaiI | ACGT | 3 cut(s) | 686, 992, 1548 |
| TaqI | TCGA | 3 cut(s) | 502, 1928, 1968 |
| TasI | AATT | 7 cut(s) | 283, 854, 1126, 1170, 1447, 1573, 1933 |
| TatI | WGTACW | 2 cut(s) | 144, 1971 |
| TauI | GCSGC | 4 cut(s) | 53, 231, 424, 1169 |
| Tru1I | TTAA | 5 cut(s) | 150, 374, 417, 1133, 1581 |
| Tru9I | TTAA | 5 cut(s) | 150, 374, 417, 1133, 1581 |
| TscAI | CASTG | 2 cut(s) | 296, 1948 |
| TseFI | GTSAC | 5 cut(s) | 257, 556, 813, 966, 990 |
| Tsp45I | GTSAC | 5 cut(s) | 257, 556, 813, 966, 990 |
| TspDTI | ATGAA | 9 cut(s) | 494, 950, 1068, 1107, 1119, 1176, 1257, 1569, 1917 |
| TspGWI | ACGGA | 1 cut(s) | 390 |
| TspRI | CASTG | 2 cut(s) | 296, 1948 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 625, 1568 |
| Vha464I | CTTAAG | 1 cut(s) | 416 |
| VpaK11BI | GGWCC | 3 cut(s) | 1232, 1599, 1696 |
| VspI | ATTAAT | 1 cut(s) | 1133 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1606 |
| XapI | RAATTY | 2 cut(s) | 1573, 1933 |
| XceI | RCATGY | 4 cut(s) | 34, 187, 616, 1117 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1340 |
| XhoI | CTCGAG | 2 cut(s) | 1927, 1967 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1126, 1179 |
| XspI | CTAG | 4 cut(s) | 111, 263, 1119, 1850 |
| ZrmI | AGTACT | 1 cut(s) | 1973 |