pycom17g12430

Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
10167273 .. 10173354
6082 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g12430.7

Sequence Viewer

Length: 2784 bp
ATGAGGCTTTCGTCTTCGTCATCATCTCCGGGGTTTAACCATCAGCTTCAGGAAGGGGAGAAGAAGTGTTTGAATTCTGAGCTATGGCATGCCTGTGCTGGGCCTCTGGTGTCTCTGCCTCTTCTTGGAAGTCGTGTAGTCTACTTTCCACAGGGCCACAGCGAGCAGGTTGCTGCATCAACCAACAAAGAAGTGGATGCCCACTTTCCCAATTACCCCAACTTGCCTCCACAACTAATTTGTCAGCTACACAATGTGACAATGCACGCAGATGTGGAGACGGATGAAGTATATGCTCAAATGACCCTACAACCATTAAATCCGCAAGAGCAAAAAGATGTATACCTACTGCCTGCAGAGTTGGGTGCTGCCAGCAAACAGCCAACCAACTATTTTTGTAAAACTTTGACTGCAAGTGATACTAGCACGCATGGAGGATTCTCAGTTCCCCGCCGTGCAGCTGAAAAAGTCTTTCCTCCTCTTGATTACTCGCAGCAGCCCCCTGCCCAGGAACTAATTGCAAGGGATCTACATGATAATGAATGGAAATTCAGACATATATTTCGAGGCCAGCCCAAGAGGCATCTTCTCACGACAGGATGGAGCGTGTTTGTTAGTGCTAAACGACTTGTTGCTGGTGATTCGGTCCTCTTTATCTGGAATGAAAAGAATCAGTTGCTCTTAGGTATTCGGCGAGCAAATCGTCCACAGACTGTCATGCCCTCATCAGTTTTGTCAAGTGACAGCATGCACATTGGTCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACAAATAGTCGCTTTACTATTTTTTATAATCCAAGGGCTAGTCCATCTGAATTTGTGATACCCCTGGCCAAGTATGTTAAAGCTGTCTATCATACTCGGGTTTCTGTGGGCATGCGATTTAGGATGCTGTTTGAGACAGAAGAGTCTAGTGTCCGTCGATACATGGGTACAATAACTGGCATCAGTGACTTAGATTCTGTTCGCTGGCCAAATTCCCATTGGCGCTCTGTGAAGGTTGGCTGGGATGAATCCACTGCTGGGGAGAGGCAGCCAAGGGTATCATTGTGGGAGATTGAACCACTAACAACATTCCCAATGTATCCATCCCCATTCCCCCTCAGACTAAAGCGACCATGGGCATCGGGCGTTCCCTCTTTCCATGGTCTAAAAGATGGTGATATGGGCATTAATTCTCCACTGATGTGGCTGCAAGGAGGGCTCGGAGATCAGGGGATGCAATCTTTGAACTTCCAGGGATTTGGAGTTTCTCCTTGGATGCAACCAAGGCTTGATGTGTCTATGGCAGGTCTACAACCCGATGTATACCAAGCAATGGCAGCTGCTGCACTTCAAGAAATGAGGGCAGTTGATTCTTCAAAATGTTCTTCACAGTCTCTTTTGCCCTTCCAGCAATCTTCAAGTGTTTCTAATGGGGCAGCTGCTGTGCTTCAAAGACAGGTCTTGCCTCAGTCTCAGTCTCAAAATGCTTTTCTTCAGAGCTTTCAAGAAAACCAAGCTCCAGCTCAGGCTCAGGTCTTGCAACAACAGTCGCAGCGTTACCATCCCTATAGTGATCAGAGGCAACAGCAGCTGCAGCAGCAGCAGCAGCATCAGCATCATCATCAGCAGCAGCAACAACAGCAGCTGAATCAGCAGCAGCAGCTGAATCAGCTTCAACAATCCCGTCATATGCAACAATTGTCTGTTCAGCAGCAGATCCCGAATGCTGTGTCTGCTCTTCCTAATTTTGCCTCAATCACTCCATCCCAGTCTGCATCTATGCAGTCTATCTCTTCGCAATCTCAGCAGCAGAGCTTTCCTGACCCTGTTGGAAATCCTATACCTTCATCTGATGTTCCCCCTATACATAGTATATTAGGTTCGCTATCACAGGATGGAACATCCCACTTACTTCACTTAAGCGGATCCAACTCTGCAATTTCTTCTTCCTTGTTATCTAAGCAGACCACTGGTGAACCGCAGCTATCATCTGGAGCTGCTCAATGTGTACTTCCACAGGTGGAACAGTTGAGAACACCACAGTCAAGTTTCTCTGAGATCACTGCCTTGCCTCCGTTTCCTGGTAGAGAATACTCTGCATTCCAAGGCGGTACTGATCCCCAAAGCAATCTTTTGTTTGGGGTGAATATTGATTCATCATCTCTTATGCTGCATAATGGGATTCCAAACCTGAGAAATATTGGCAATGGAAATGATTCAGTGTCCGTGCCCTTTGGTGCTTCCAATTATGCCAGTGGCACAGGCAATGATTTTCCACTTAATTCTGACATGACTACATCAAGTTGTGTAGATGAATCAGGTTTCTTGCAGTCTTCAGAAAATGTGGACCAAGTAAATCCAACTGGAACCTTTGTGAAGGTTCACAAGTTAGGGTCCTTTGGGAGGTCACTGGATATTTCTAAATTCAGCAGCTATGATGATCTGCGCAGTGAGCTCGCACGTATGTTTGGCCTTGAAGGCCAACTGGAGGACCCTCAGAGATCAGGCTGGCAGCTTGTATTTGTTGACAGGGAGAATGATGTTCTTCTCCTTGGTGACGACCCTTGGCAGGAGTTTGTGAACAATGTGTATTACATCAAGATACTCTCGCCTCTGGAAGTGCAACAAATGGGAAGGGAAGGCCTCAACAGTGTGGCGTCTGTCCCAAACAATAAACTTTCCAATGGTAGCAACACCACTGTTGACTACGTAGGTCGACAGGACTTGAGAAACTCAAGGAATGGGATTGCATCTTTGGGATCACTCGACTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

928

Amino Acids

102.34

Weight (kDa)

6.17

Isoelectric Point (pI)

65.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 816
AasI GACNNNNNNGTC 1 cut(s) 931
Acc16I TGCGCA 1 cut(s) 2456
Acc36I ACCTGC 2 cut(s) 157, 1304
AccB7I CCANNNNNTGG 1 cut(s) 1342
AccI GTMKAC 5 cut(s) 141, 342, 1318, 1332, 2725
AciI CCGC 5 cut(s) 323, 451, 1932, 1988, 2118
AclWI GGATC 6 cut(s) 534, 1720, 1929, 1942, 2120, 2776
AcoI YGGCCR 2 cut(s) 855, 995
AcsI RAATTY 5 cut(s) 73, 548, 839, 1000, 2432
AcuI CTGAAG 3 cut(s) 32, 1487, 2328
AcyI GRCGYC 1 cut(s) 2666
AdeI CACNNNGTG 1 cut(s) 256
AfaI GTAC 3 cut(s) 958, 2019, 2122
AfiI CCNNNNNNNGG 9 cut(s) 99, 125, 508, 1047, 1342, 2090, 2412, 2497, 2578
AflII CTTAAG 1 cut(s) 1927
AjnI CCWGG 4 cut(s) 507, 852, 1260, 2089
AleI CACNNNNGTG 1 cut(s) 1210
AloI GAACNNNNNNTCC 2 cut(s) 429, 461
Alw21I GWGCWC 1 cut(s) 2466
Alw26I GTCTC 6 cut(s) 117, 272, 917, 1407, 1485, 1491
AlwI GGATC 6 cut(s) 534, 1720, 1929, 1942, 2120, 2776
AlwNI CAGNNNCTG 5 cut(s) 1352, 1451, 1600, 1654, 1672
Ama87I CYCGRG 1 cut(s) 885
AoxI GGCC 8 cut(s) 101, 154, 568, 855, 995, 2479, 2488, 2650
ApoI RAATTY 5 cut(s) 73, 548, 839, 1000, 2432
ArsI GACNNNNNNTTYG 4 cut(s) 546, 578, 1724, 1756
AseI ATTAAT 1 cut(s) 1197
Asp700I GAANNNNTTC 1 cut(s) 2224
AspLEI GCGC 2 cut(s) 1014, 2457
AspS9I GGNCC 6 cut(s) 101, 154, 646, 2356, 2403, 2500
AsuC2I CCSGG 1 cut(s) 30
AsuHPI GGTGA 5 cut(s) 650, 1196, 1994, 2164, 2576
AvaI CYCGRG 1 cut(s) 885
AvaII GGWCC 4 cut(s) 646, 2356, 2403, 2500
BaeGI GKGCMC 1 cut(s) 2241
BaeI ACNNNNGTAYC 2 cut(s) 940, 973
BalI TGGCCA 2 cut(s) 857, 997
BamHI GGATCC 1 cut(s) 1934
BanII GRGCYC 2 cut(s) 1230, 2466
BbsI GAAGAC 3 cut(s) 6, 752, 2334
Bbv12I GWGCWC 1 cut(s) 2466
BccI CCATC 8 cut(s) 48, 594, 841, 1120, 1175, 1578, 1780, 1898
BceAI ACGGC 1 cut(s) 438
BcgI CGANNNNNNTGC 4 cut(s) 152, 186, 2446, 2480
BciT130I CCWGG 4 cut(s) 509, 854, 1262, 2091
BciVI GTATCC 1 cut(s) 1119
BclI TGATCA 1 cut(s) 1582
BcnI CCSGG 1 cut(s) 30
BcoDI GTCTC 6 cut(s) 117, 272, 917, 1407, 1485, 1491
BfaI CTAG 3 cut(s) 423, 828, 936
BfmI CTRYAG 4 cut(s) 354, 771, 1576, 1601
BfoI RGCGCY 1 cut(s) 1015
BfrI CTTAAG 1 cut(s) 1927
BfuAI ACCTGC 2 cut(s) 157, 1304
BfuI GTATCC 1 cut(s) 1119
BglI GCCNNNNNGGC 2 cut(s) 580, 2487
Bme1390I CCNGG 5 cut(s) 30, 509, 854, 1262, 2091
Bme18I GGWCC 4 cut(s) 646, 2356, 2403, 2500
BmeT110I CYCGRG 1 cut(s) 885
BmgT120I GGNCC 6 cut(s) 101, 154, 646, 2356, 2403, 2500
BmiI GGNNCC 4 cut(s) 1936, 2377, 2404, 2502
BmrFI CCNGG 5 cut(s) 30, 509, 854, 1262, 2091
BmrI ACTGGG 1 cut(s) 1771
BmuI ACTGGG 1 cut(s) 1771
BpiI GAAGAC 3 cut(s) 6, 752, 2334
BpmI CTGGAG 3 cut(s) 1512, 2022, 2516
Bpu10I CCTNAGC 2 cut(s) 1533, 1539
BpuEI CTTGAG 2 cut(s) 2728, 2755
BpuMI CCSGG 1 cut(s) 30
BsaAI YACGTR 2 cut(s) 2471, 2719
BsaHI GRCGYC 1 cut(s) 2666
BsaXI ACNNNNNCTCC 2 cut(s) 50, 80
Bsc4I CCNNNNNNNGG 9 cut(s) 99, 125, 508, 1047, 1342, 2090, 2412, 2497, 2578
Bse1I ACTGG 7 cut(s) 970, 1777, 1984, 2262, 2377, 2424, 2499
Bse3DI GCAATG 3 cut(s) 1347, 2221, 2281
BseBI CCWGG 4 cut(s) 509, 854, 1262, 2091
BseLI CCNNNNNNNGG 9 cut(s) 99, 125, 508, 1047, 1342, 2090, 2412, 2497, 2578
BseMI GCAATG 3 cut(s) 1347, 2221, 2281
BseNI ACTGG 7 cut(s) 970, 1777, 1984, 2262, 2377, 2424, 2499
BseRI GAGGAG 1 cut(s) 468
BseSI GKGCMC 1 cut(s) 2241
BseYI CCCAGC 3 cut(s) 98, 1029, 1046
BsgI GTGCAG 2 cut(s) 477, 1338
BshFI GGCC 8 cut(s) 103, 156, 570, 857, 997, 2481, 2490, 2652
BsiHKAI GWGCWC 1 cut(s) 2466
BsiHKCI CYCGRG 1 cut(s) 885
BsiSI CCGG 1 cut(s) 29
BslFI GGGAC 1 cut(s) 2657
BslI CCNNNNNNNGG 9 cut(s) 99, 125, 508, 1047, 1342, 2090, 2412, 2497, 2578
BsmAI GTCTC 6 cut(s) 117, 272, 917, 1407, 1485, 1491
BsmBI CGTCTC 1 cut(s) 272
BsmFI GGGAC 1 cut(s) 2657
BsmI GAATGC 2 cut(s) 1738, 2108
BsnI GGCC 8 cut(s) 103, 156, 570, 857, 997, 2481, 2490, 2652
BsoBI CYCGRG 1 cut(s) 885
Bsp1286I GDGCHC 3 cut(s) 1230, 2241, 2466
Bsp19I CCATGG 2 cut(s) 1142, 1168
BspACI CCGC 5 cut(s) 323, 451, 1932, 1988, 2118
BspANI GGCC 8 cut(s) 103, 156, 570, 857, 997, 2481, 2490, 2652
BspLI GGNNCC 4 cut(s) 1936, 2377, 2404, 2502
BspMAI CTGCAG 3 cut(s) 358, 775, 1605
BspMI ACCTGC 2 cut(s) 157, 1304
BspPI GGATC 6 cut(s) 534, 1720, 1929, 1942, 2120, 2776
BspQI GCTCTTC 1 cut(s) 1752
BspTI CTTAAG 1 cut(s) 1927
BsrDI GCAATG 3 cut(s) 1347, 2221, 2281
BsrI ACTGG 7 cut(s) 970, 1777, 1984, 2262, 2377, 2424, 2499
BssNAI GTATAC 2 cut(s) 343, 1333
BssNI GRCGYC 1 cut(s) 2666
BssT1I CCWWGG 9 cut(s) 821, 1061, 1142, 1168, 1280, 1292, 2113, 2560, 2573
Bst1107I GTATAC 2 cut(s) 343, 1333
Bst2UI CCWGG 4 cut(s) 509, 854, 1262, 2091
Bst4CI ACNGT 7 cut(s) 715, 1401, 1557, 2037, 2052, 2660, 2710
Bst6I CTCTTC 4 cut(s) 126, 924, 1752, 1807
BstACI GRCGYC 1 cut(s) 2666
BstAFI CTTAAG 1 cut(s) 1927
BstAPI GCANNNNNTGC 2 cut(s) 779, 1352
BstBAI YACGTR 2 cut(s) 2471, 2719
BstDSI CCRYGG 2 cut(s) 1142, 1168
BstENI CCTNNNNNAGG 1 cut(s) 2410
BstH2I RGCGCY 1 cut(s) 1015
BstHHI GCGC 2 cut(s) 1014, 2457
BstMAI GTCTC 6 cut(s) 117, 272, 917, 1407, 1485, 1491
BstNI CCWGG 4 cut(s) 509, 854, 1262, 2091
BstNSI RCATGY 3 cut(s) 92, 751, 904
BstSCI CCNGG 5 cut(s) 28, 507, 852, 1260, 2089
BstSFI CTRYAG 4 cut(s) 354, 771, 1576, 1601
BstSLI GKGCMC 1 cut(s) 2241
BstSNI TACGTA 1 cut(s) 2719
BstV2I GAAGAC 3 cut(s) 6, 752, 2334
BstX2I RGATCY 3 cut(s) 526, 1725, 1934
BstXI CCANNNNNNTGG 2 cut(s) 1212, 1268
BstYI RGATCY 3 cut(s) 526, 1725, 1934
BstZ17I GTATAC 2 cut(s) 343, 1333
BsuI GTATCC 1 cut(s) 1119
BsuRI GGCC 8 cut(s) 103, 156, 570, 857, 997, 2481, 2490, 2652
BtgI CCRYGG 2 cut(s) 1142, 1168
BtsI GCAGTG 3 cut(s) 1041, 2070, 2464
BveI ACCTGC 2 cut(s) 157, 1304
CaiI CAGNNNCTG 5 cut(s) 1352, 1451, 1600, 1654, 1672
CfoI GCGC 2 cut(s) 1014, 2457
Cfr13I GGNCC 6 cut(s) 101, 154, 646, 2356, 2403, 2500
CseI GACGC 1 cut(s) 2655
Csp6I GTAC 3 cut(s) 957, 2018, 2121
CviQI GTAC 3 cut(s) 957, 2018, 2121
DraIII CACNNNGTG 1 cut(s) 256
DrdI GACNNNNNNGTC 1 cut(s) 931
DseDI GACNNNNNNGTC 1 cut(s) 931
EaeI YGGCCR 2 cut(s) 855, 995
Eam1104I CTCTTC 4 cut(s) 126, 924, 1752, 1807
EarI CTCTTC 4 cut(s) 126, 924, 1752, 1807
Ecl136II GAGCTC 1 cut(s) 2464
Eco105I TACGTA 1 cut(s) 2719
Eco130I CCWWGG 9 cut(s) 821, 1061, 1142, 1168, 1280, 1292, 2113, 2560, 2573
Eco147I AGGCCT 1 cut(s) 2652
Eco24I GRGCYC 2 cut(s) 1230, 2466
Eco47I GGWCC 4 cut(s) 646, 2356, 2403, 2500
Eco53kI GAGCTC 1 cut(s) 2464
Eco57I CTGAAG 3 cut(s) 32, 1487, 2328
Eco88I CYCGRG 1 cut(s) 885
EcoICRI GAGCTC 1 cut(s) 2464
EcoNI CCTNNNNNAGG 1 cut(s) 2410
EcoO109I RGGNCCY 2 cut(s) 2403, 2500
EcoRI GAATTC 1 cut(s) 73
EcoRII CCWGG 4 cut(s) 507, 852, 1260, 2089
EcoT14I CCWWGG 9 cut(s) 821, 1061, 1142, 1168, 1280, 1292, 2113, 2560, 2573
EcoT38I GRGCYC 2 cut(s) 1230, 2466
ErhI CCWWGG 9 cut(s) 821, 1061, 1142, 1168, 1280, 1292, 2113, 2560, 2573
Esp3I CGTCTC 1 cut(s) 272
FaqI GGGAC 1 cut(s) 2657
FauI CCCGC 1 cut(s) 458
FauNDI CATATG 1 cut(s) 1698
FbaI TGATCA 1 cut(s) 1582
FblI GTMKAC 5 cut(s) 141, 342, 1318, 1332, 2725
FriOI GRGCYC 2 cut(s) 1230, 2466
FspBI CTAG 3 cut(s) 423, 828, 936
FspI TGCGCA 1 cut(s) 2456
GlaI GCGC 2 cut(s) 1013, 2456
GsaI CCCAGC 3 cut(s) 102, 1033, 1050
GsuI CTGGAG 3 cut(s) 1512, 2022, 2516
HaeII RGCGCY 1 cut(s) 1015
HaeIII GGCC 8 cut(s) 103, 156, 570, 857, 997, 2481, 2490, 2652
HapII CCGG 1 cut(s) 29
HgaI GACGC 1 cut(s) 2655
HhaI GCGC 2 cut(s) 1014, 2457
Hin1I GRCGYC 1 cut(s) 2666
Hin6I GCGC 2 cut(s) 1012, 2455
HinP1I GCGC 2 cut(s) 1012, 2455
HincII GTYRAC 3 cut(s) 2536, 2713, 2726
HindII GTYRAC 3 cut(s) 2536, 2713, 2726
HpaII CCGG 1 cut(s) 29
HphI GGTGA 5 cut(s) 650, 1196, 1994, 2164, 2576
Hpy99I CGWCG 1 cut(s) 948
HpyAV CCTTC 8 cut(s) 47, 1015, 1423, 1863, 2380, 2480, 2637, 2642
HpyCH4III ACNGT 7 cut(s) 715, 1401, 1557, 2037, 2052, 2660, 2710
HpyCH4IV ACGT 2 cut(s) 2470, 2718
HpySE526I ACGT 2 cut(s) 2470, 2718
Hsp92I GRCGYC 1 cut(s) 2666
HspAI GCGC 2 cut(s) 1012, 2455
Ksp22I TGATCA 1 cut(s) 1582
LguI GCTCTTC 1 cut(s) 1752
LmnI GCTCC 3 cut(s) 603, 1531, 2003
MaeI CTAG 3 cut(s) 423, 828, 936
MaeII ACGT 2 cut(s) 2470, 2718
MaeIII GTNAC 6 cut(s) 256, 740, 974, 1565, 2415, 2564
MfeI CAATTG 1 cut(s) 1706
MflI RGATCY 3 cut(s) 526, 1725, 1934
MhlI GDGCHC 3 cut(s) 1230, 2241, 2466
MlsI TGGCCA 2 cut(s) 857, 997
MluNI TGGCCA 2 cut(s) 857, 997
MlyI GAGTC 1 cut(s) 941
MmeI TCCRAC 3 cut(s) 1819, 1962, 2393
Mox20I TGGCCA 2 cut(s) 857, 997
MroXI GAANNNNTTC 1 cut(s) 2224
MscI TGGCCA 2 cut(s) 857, 997
MseI TTAA 6 cut(s) 36, 317, 867, 1197, 1928, 2289
MslI CAYNNNNRTG 4 cut(s) 93, 270, 537, 1210
Msp20I TGGCCA 2 cut(s) 857, 997
MspA1I CMGCKG 7 cut(s) 461, 785, 1349, 1448, 1600, 1654, 1672
MspCI CTTAAG 1 cut(s) 1927
MspI CCGG 1 cut(s) 29
MspR9I CCNGG 5 cut(s) 30, 509, 854, 1262, 2091
MunI CAATTG 1 cut(s) 1706
Mva1269I GAATGC 2 cut(s) 1738, 2108
MvaI CCWGG 4 cut(s) 509, 854, 1262, 2091
NciI CCSGG 1 cut(s) 30
NcoI CCATGG 2 cut(s) 1142, 1168
NdeI CATATG 1 cut(s) 1698
NlaIV GGNNCC 4 cut(s) 1936, 2377, 2404, 2502
NmuCI GTSAC 5 cut(s) 256, 740, 974, 2415, 2564
NsbI TGCGCA 1 cut(s) 2456
NspI RCATGY 3 cut(s) 92, 751, 904
OliI CACNNNNGTG 1 cut(s) 1210
PaeI GCATGC 3 cut(s) 92, 751, 904
PceI AGGCCT 1 cut(s) 2652
PciSI GCTCTTC 1 cut(s) 1752
PctI GAATGC 2 cut(s) 1738, 2108
PdmI GAANNNNTTC 1 cut(s) 2224
PflMI CCANNNNNTGG 1 cut(s) 1342
PleI GAGTC 1 cut(s) 940
PpsI GAGTC 1 cut(s) 940
Ppu21I YACGTR 2 cut(s) 2471, 2719
PpuMI RGGWCCY 2 cut(s) 2403, 2500
PshBI ATTAAT 1 cut(s) 1197
PsiI TTATAA 1 cut(s) 816
Psp124BI GAGCTC 1 cut(s) 2466
Psp5II RGGWCCY 2 cut(s) 2403, 2500
Psp6I CCWGG 4 cut(s) 507, 852, 1260, 2089
PspFI CCCAGC 3 cut(s) 98, 1029, 1046
PspGI CCWGG 4 cut(s) 507, 852, 1260, 2089
PspN4I GGNNCC 4 cut(s) 1936, 2377, 2404, 2502
PspPI GGNCC 6 cut(s) 101, 154, 646, 2356, 2403, 2500
PspPPI RGGWCCY 2 cut(s) 2403, 2500
PsrI GAACNNNNNNTAC 2 cut(s) 1873, 1905
PstI CTGCAG 3 cut(s) 358, 775, 1605
PstNI CAGNNNCTG 5 cut(s) 1352, 1451, 1600, 1654, 1672
PsuI RGATCY 3 cut(s) 526, 1725, 1934
PvuII CAGCTG 7 cut(s) 461, 785, 1349, 1448, 1600, 1654, 1672
RsaI GTAC 3 cut(s) 958, 2019, 2122
RsaNI GTAC 3 cut(s) 957, 2018, 2121
RseI CAYNNNNRTG 4 cut(s) 93, 270, 537, 1210
SacI GAGCTC 1 cut(s) 2466
SalI GTCGAC 1 cut(s) 2724
SapI GCTCTTC 1 cut(s) 1752
SaqAI TTAA 6 cut(s) 36, 317, 867, 1197, 1928, 2289
Sau96I GGNCC 6 cut(s) 101, 154, 646, 2356, 2403, 2500
SchI GAGTC 1 cut(s) 941
ScrFI CCNGG 5 cut(s) 30, 509, 854, 1262, 2091
SduI GDGCHC 3 cut(s) 1230, 2241, 2466
SfcI CTRYAG 4 cut(s) 354, 771, 1576, 1601
SfiI GGCCNNNNNGGCC 1 cut(s) 2487
SinI GGWCC 4 cut(s) 646, 2356, 2403, 2500
SmiMI CAYNNNNRTG 4 cut(s) 93, 270, 537, 1210
SmlI CTYRAG 3 cut(s) 1927, 2734, 2743
SmoI CTYRAG 3 cut(s) 1927, 2734, 2743
SnaBI TACGTA 1 cut(s) 2719
SphI GCATGC 3 cut(s) 92, 751, 904
SseBI AGGCCT 1 cut(s) 2652
SsiI CCGC 5 cut(s) 323, 451, 1932, 1988, 2118
SspI AATATT 2 cut(s) 2158, 2209
SspMI CTAG 3 cut(s) 423, 828, 936
SstI GAGCTC 1 cut(s) 2466
StuI AGGCCT 1 cut(s) 2652
StyD4I CCNGG 5 cut(s) 28, 507, 852, 1260, 2089
StyI CCWWGG 9 cut(s) 821, 1061, 1142, 1168, 1280, 1292, 2113, 2560, 2573
TaaI ACNGT 7 cut(s) 715, 1401, 1557, 2037, 2052, 2660, 2710
TaiI ACGT 2 cut(s) 2473, 2721
TaqI TCGA 4 cut(s) 565, 946, 2725, 2775
TaqII GACCGA 1 cut(s) 634
TatI WGTACW 1 cut(s) 2017
Tru1I TTAA 6 cut(s) 36, 317, 867, 1197, 1928, 2289
Tru9I TTAA 6 cut(s) 36, 317, 867, 1197, 1928, 2289
TseFI GTSAC 5 cut(s) 256, 740, 974, 2415, 2564
Tsp45I GTSAC 5 cut(s) 256, 740, 974, 2415, 2564
TspDTI ATGAA 7 cut(s) 300, 555, 678, 1050, 1845, 2154, 2337
TspGWI ACGGA 4 cut(s) 296, 932, 2073, 2224
Van91I CCANNNNNTGG 1 cut(s) 1342
Vha464I CTTAAG 1 cut(s) 1927
VpaK11BI GGWCC 4 cut(s) 646, 2356, 2403, 2500
VspI ATTAAT 1 cut(s) 1197
XagI CCTNNNNNAGG 1 cut(s) 2410
XapI RAATTY 5 cut(s) 73, 548, 839, 1000, 2432
XceI RCATGY 3 cut(s) 92, 751, 904
XcmI CCANNNNNNNNNTGG 2 cut(s) 190, 1005
XmiI GTMKAC 5 cut(s) 141, 342, 1318, 1332, 2725
XmnI GAANNNNTTC 1 cut(s) 2224
XspI CTAG 3 cut(s) 423, 828, 936
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.