pycom10g21420

Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
24046008 .. 24051155
5148 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g21420.7

Sequence Viewer

Length: 2682 bp
ATGAGGCTCTCATCTGCTGGTTTTAGTCCTCGATCCCAGGAAGGGGAGAAGCGAGTTTTGAATTCTGAACTTTGGCATGCTTGTGCCGGTCCTCTTGTTTCTTTGCCCGCTGTTGGAAGCCGTGTGGTTTATTTTGCTCAAGGTCACAGCGAACAGGTTGCGGCATCAACCAACAAGGAAGCGGACGCCCATATTCCTAACTATCCATGCTTGCCACCGCAGCTCATCTGTCAACTCCACAATGTGACAATGCATGCAGATGTTGAGACAGATGAAGTGTATGCACAGATGACCTTGCAACCTCTAAATCCGCAAGAGCAAAAAGATGGCTACCTTCCAGCAGGGTTGGGCAGCCCAAACAAACAGCCTACAAATTATTTTTGTAAAACCTTGACAGCCAGTGACACAAGTACTCATGGTGGTTTCTCTGTCCCTCGCCGGGCAGCTGAAAAAGTGTTTCCTCCATTGGATTTTTCCCAACAACCACCTGCCCAAGAGTTAATTGCAAGGGATCTACATGATAATGAATGGAAGTTTAGACACATTTTTCGAGGCCAGCCCAAAAGGCACCTCCTTACAACGGGTTGGAGTGTGTTCGTAAGTGCAAAAAGACTTGTTGCTGGAGACTCGGTCCTTTTCATCTGGAATGAAAAGAATCAGCTACTCCTTGGTATCCGGAGAGCTAACCGACCACAAACTGTGATGCCTTCATCAGTTTTATCAAGCGATAGCATGCACTTGGGACTTCTTGCTGCTGCAGCTCATGCAGCTGCAACAAATAGTCGTTTCACCATATTTTATAATCCAAGGGCGAGCCCATCTGAGTTTGTCATTCCTCTGGCCACGTACATTAAAGCGGTCTATCATACATGCATTTCTGTTGGCATGCGTTTTCGGATGCTGTTTGAAACAGAAGAATCAAGCGTCCGCCGCCACATGGGAACAATAACTGGCATAAGTGACCTAGATCCAGCTCGGTGGCCTAATTCACATTGGCGCTCAGTCAAGGTGGGTTGGGATGAATCCACGGCTGGGGAGAGACAGCCAAGAGTCTCACTGTGGGAGGTTGAACCATTAACAACATTTCCTATGTATCCATCTACGTTCCCCCTCAGGCTTAAGCGGCCGTGGCCACCTGGACTACCTTCTTTCAGTGGTATGAGGGACGACGACCTTGGCATGAATTCTCAACTTATGTGGCTTCAAGGAAATAATGGAGACCGTGGAATGCAATCGCTGAGCTTTTCTGGCATGGGGATCACACCATGGATGCAGCCAAGACTTGATGCTTCTATGATTGGCTTGCAACCAGACATGTACCAAGCTATGGCTGCTGCTGCACTTCAAGAGATGAGGGCAGTAGATCCTTCCAGACCGCTACCTACATCCCATCTACAGTTCCAGCAGCCCCAAAGCCTCCCTAATAGGTCTGCTGCCTTGATGCAGCCTCAGATGGTGCAAGTGTCTCAATCTCAACAACCCTTTCTCCAAGGTGTTCAAGAGCACCATCGCCAGTCTCAGCCTCAGGCGCAAACTCAGTCTCACCTTCTTCAGCAGCAATTGCAGCATCAGAATTCTTTCAGTAACCAGCAGCAGCAGCAATTAGTTGATCATCAGCAGATTCCAAGTGCTGTCTCTTCCATGACTCGGTTTGCTTCCGCCTCTCAATCCCAGTCACCATCTTTGCAAGTCGTCACATCGCTATGCCAGCAACAGAGTTTTTCTGATTCTAATGGGAACCCTGCAACCAGCACCATTTTATCTCCCTTGCACAGTCTCATGGGTTCATTTCCACAGGATGAATCATCCCACCTGCTCAACCTGCCTAGAACCAATCAATTAATATCTTCTGATGGCTGGCCATCAAAGCGAGCAGCAATTGACCCTCTTTCCTCTGGAGTTTCTCAATGTATTCTGCCTCGAGCGGAACAGTTGGGACCTCCCCACATTACACTGTCTCAGAATTCTATTTCATTACCACCCTTTCCAGGGAGAGAGTGCTCACTAGACCAAGAAGGTGGTACCGATCCTCAAAGCCATCTTTTATTCGGTGTCAATATAGAGTCCTCACCTCTTATAATGCAGAGTGGGATGTCAAACCTTAGAGGAGTTGGCAGCAATTGTGATAGTATGACCTTGCATTTTCCTTCTTCTAATTACATGAGCACTGGAGGCACAGATTTTTCACTTCAAACAGCAGTTACACCTTCTAGTTGTATTGATGAATCAGGGTTCCTGCAGTCTCCAGAAAATGCGGACCATGGAGACCCACTAAAAAGAAATTTTGTTAAGGTTTATAAGTCAGGGTCCTTTGGAAGGTCACTGGACATTACCAAGTTCAGCAGCTATCAGGAGCTACGTAACGAGCTTGCTCGTATGTTTGGCCTTGAAGGTGAATTGGACGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGAATGATGTTCTTCTCCTCGGGGATGACCCCTGGCCGGAGTTTGTAAATAGCGTGTGGTGTATCAAAATACTCTCACCACAGGAAGTGCAGCAAATGGGAAAACGAGGCCTAGAACTTCTAAAGTCAGTCCCAAATCAGAGGCTCCCAAACAATAGTTGCGACGACTATGGAAGCCGGCAGGACTCAAGAAACTTGAGCAGCGGGATAACGTCCGTGGGGTCACTCGAGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

894

Amino Acids

98.9

Weight (kDa)

6.24

Isoelectric Point (pI)

66.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 801, 2078, 2298
AarI CACCTGC 2 cut(s) 496, 1821
Acc36I ACCTGC 3 cut(s) 496, 1821, 1830
Acc65I GGTACC 1 cut(s) 2021
AccB1I GGYRCC 2 cut(s) 567, 2021
AccB7I CCANNNNNTGG 1 cut(s) 1327
AccBSI CCGCTC 1 cut(s) 1925
AccIII TCCGGA 1 cut(s) 675
AclWI GGATC 6 cut(s) 27, 519, 962, 1265, 1358, 2021
AcoI YGGCCR 5 cut(s) 840, 1124, 1130, 1859, 2480
AcsI RAATTY 5 cut(s) 61, 1183, 1573, 1963, 2281
AcuI CTGAAG 1 cut(s) 1535
AcyI GRCGYC 1 cut(s) 186
AdeI CACNNNGTG 1 cut(s) 244
AfaI GTAC 4 cut(s) 412, 848, 1319, 2023
AflII CTTAAG 1 cut(s) 1118
AflIII ACRYGT 1 cut(s) 1314
AgsI TTSAA 8 cut(s) 61, 908, 1070, 1205, 1346, 1499, 2192, 2390
AjnI CCWGG 4 cut(s) 36, 1135, 1987, 2477
Alw21I GWGCWC 3 cut(s) 1506, 2003, 2168
AlwI GGATC 6 cut(s) 27, 519, 962, 1265, 1358, 2021
Ama87I CYCGRG 3 cut(s) 1920, 2465, 2672
Aor13HI TCCGGA 1 cut(s) 675
AoxI GGCC 9 cut(s) 553, 840, 980, 1124, 1130, 1859, 2383, 2480, 2554
ApoI RAATTY 5 cut(s) 61, 1183, 1573, 1963, 2281
ArsI GACNNNNNNTTYG 2 cut(s) 531, 563
AseI ATTAAT 1 cut(s) 1841
Asp700I GAANNNNTTC 1 cut(s) 1577
Asp718I GGTACC 1 cut(s) 2021
AspLEI GCGC 2 cut(s) 999, 1531
AspS9I GGNCC 5 cut(s) 89, 631, 1937, 2257, 2307
AsuC2I CCSGG 2 cut(s) 440, 2444
AsuHPI GGTGA 6 cut(s) 781, 1535, 1668, 2061, 2405, 2514
AvaI CYCGRG 3 cut(s) 1920, 2465, 2672
AvaII GGWCC 5 cut(s) 89, 631, 1937, 2257, 2307
AxyI CCTNAGG 2 cut(s) 1112, 1524
BalI TGGCCA 3 cut(s) 842, 1132, 1861
BanI GGYRCC 2 cut(s) 567, 2021
BanII GRGCYC 1 cut(s) 818
Bbv12I GWGCWC 3 cut(s) 1506, 2003, 2168
BceAI ACGGC 3 cut(s) 105, 1044, 1111
BcgI CGANNNNNNTGC 2 cut(s) 140, 174
BciT130I CCWGG 4 cut(s) 38, 1137, 1989, 2479
BciVI GTATCC 2 cut(s) 683, 1104
BclI TGATCA 1 cut(s) 1609
BcnI CCSGG 2 cut(s) 440, 2444
BfaI CTAG 5 cut(s) 965, 1827, 2006, 2211, 2558
BfmI CTRYAG 3 cut(s) 756, 1394, 2237
BfoI RGCGCY 1 cut(s) 1000
BfrI CTTAAG 1 cut(s) 1118
BfuAI ACCTGC 3 cut(s) 496, 1821, 1830
BfuI GTATCC 2 cut(s) 683, 1104
BglI GCCNNNNNGGC 1 cut(s) 565
BlpI GCTNAGC 1 cut(s) 1238
BmcAI AGTACT 1 cut(s) 412
Bme1390I CCNGG 6 cut(s) 38, 440, 1137, 1989, 2444, 2479
Bme18I GGWCC 5 cut(s) 89, 631, 1937, 2257, 2307
BmeT110I CYCGRG 3 cut(s) 1920, 2465, 2672
BmgT120I GGNCC 5 cut(s) 89, 631, 1937, 2257, 2307
BmiI GGNNCC 7 cut(s) 569, 1739, 1938, 2023, 2234, 2308, 2591
BmrFI CCNGG 6 cut(s) 38, 440, 1137, 1989, 2444, 2479
BmrI ACTGGG 1 cut(s) 1666
BmsI GCATC 7 cut(s) 173, 693, 888, 1260, 1276, 1431, 1576
BmuI ACTGGG 1 cut(s) 1666
BpmI CTGGAG 4 cut(s) 642, 1917, 2190, 2229
Bpu1102I GCTNAGC 1 cut(s) 1238
BpuEI CTTGAG 3 cut(s) 123, 2617, 2662
BpuMI CCSGG 2 cut(s) 440, 2444
BsaAI YACGTR 2 cut(s) 846, 2360
BsaHI GRCGYC 1 cut(s) 186
BsaI GGTCTC 2 cut(s) 1212, 2259
BsaWI WCCGGW 1 cut(s) 675
BsaXI ACNNNNNCTCC 4 cut(s) 615, 645, 1470, 1500
Bse118I RCCGGY 2 cut(s) 86, 2622
Bse1I ACTGG 6 cut(s) 399, 955, 1513, 1672, 2173, 2328
Bse21I CCTNAGG 2 cut(s) 1112, 1524
BseAI TCCGGA 1 cut(s) 675
BseBI CCWGG 4 cut(s) 38, 1137, 1989, 2479
BseGI GGATG 8 cut(s) 903, 1024, 1275, 1385, 1804, 1805, 2097, 2476
BseMII CTCAG 9 cut(s) 813, 1014, 1126, 1229, 1463, 1532, 1538, 1550, 1973
BseNI ACTGG 6 cut(s) 399, 955, 1513, 1672, 2173, 2328
BseRI GAGGAG 2 cut(s) 2121, 2453
BseX3I CGGCCG 1 cut(s) 1124
BseYI CCCAGC 1 cut(s) 1031
BsgI GTGCAG 2 cut(s) 1323, 2555
Bsh1285I CGRYCG 1 cut(s) 1127
BshFI GGCC 9 cut(s) 555, 842, 982, 1126, 1132, 1861, 2385, 2482, 2556
BshNI GGYRCC 2 cut(s) 567, 2021
BsiEI CGRYCG 1 cut(s) 1127
BsiHKAI GWGCWC 3 cut(s) 1506, 2003, 2168
BsiHKCI CYCGRG 3 cut(s) 1920, 2465, 2672
BsiSI CCGG 6 cut(s) 87, 439, 676, 2443, 2483, 2623
BslFI GGGAC 5 cut(s) 416, 756, 1178, 1950, 2561
BsmFI GGGAC 5 cut(s) 416, 756, 1178, 1950, 2561
BsmI GAATGC 1 cut(s) 1233
BsnI GGCC 9 cut(s) 555, 842, 982, 1126, 1132, 1861, 2385, 2482, 2556
Bso31I GGTCTC 2 cut(s) 1212, 2259
BsoBI CYCGRG 3 cut(s) 1920, 2465, 2672
Bsp1286I GDGCHC 4 cut(s) 818, 1506, 2003, 2168
Bsp13I TCCGGA 1 cut(s) 675
Bsp143I GATC 8 cut(s) 32, 511, 967, 1257, 1363, 1609, 2026, 2414
Bsp1720I GCTNAGC 1 cut(s) 1238
Bsp19I CCATGG 2 cut(s) 1265, 2260
BspANI GGCC 9 cut(s) 555, 842, 982, 1126, 1132, 1861, 2385, 2482, 2556
BspCNI CTCAG 9 cut(s) 814, 1013, 1125, 1230, 1462, 1531, 1537, 1549, 1972
BspEI TCCGGA 1 cut(s) 675
BspLI GGNNCC 7 cut(s) 569, 1739, 1938, 2023, 2234, 2308, 2591
BspMAI CTGCAG 2 cut(s) 760, 2241
BspMI ACCTGC 3 cut(s) 496, 1821, 1830
BspPI GGATC 6 cut(s) 27, 519, 962, 1265, 1358, 2021
BspT107I GGYRCC 2 cut(s) 567, 2021
BspTI CTTAAG 1 cut(s) 1118
BspTNI GGTCTC 2 cut(s) 1212, 2259
BsrBI CCGCTC 1 cut(s) 1925
BsrFI RCCGGY 2 cut(s) 86, 2622
BsrI ACTGG 6 cut(s) 399, 955, 1513, 1672, 2173, 2328
BssAI RCCGGY 2 cut(s) 86, 2622
BssMI GATC 8 cut(s) 32, 511, 967, 1257, 1363, 1609, 2026, 2414
BssNI GRCGYC 1 cut(s) 186
BssT1I CCWWGG 6 cut(s) 667, 806, 1174, 1265, 1489, 2260
Bst2UI CCWGG 4 cut(s) 38, 1137, 1989, 2479
Bst4CI ACNGT 7 cut(s) 700, 1059, 1223, 1398, 1775, 1932, 1956
Bst6I CTCTTC 1 cut(s) 1642
BstACI GRCGYC 1 cut(s) 186
BstAFI CTTAAG 1 cut(s) 1118
BstAPI GCANNNNNTGC 2 cut(s) 764, 1561
BstBAI YACGTR 2 cut(s) 846, 2360
BstDSI CCRYGG 6 cut(s) 1026, 1127, 1222, 1265, 2260, 2661
BstENI CCTNNNNNAGG 1 cut(s) 2314
BstF5I GGATG 8 cut(s) 903, 1024, 1275, 1385, 1804, 1805, 2097, 2476
BstH2I RGCGCY 1 cut(s) 1000
BstHHI GCGC 2 cut(s) 999, 1531
BstKTI GATC 8 cut(s) 35, 514, 970, 1260, 1366, 1612, 2029, 2417
BstMBI GATC 8 cut(s) 32, 511, 967, 1257, 1363, 1609, 2026, 2414
BstMCI CGRYCG 1 cut(s) 1127
BstNI CCWGG 4 cut(s) 38, 1137, 1989, 2479
BstNSI RCATGY 6 cut(s) 80, 257, 736, 873, 889, 1318
BstSCI CCNGG 6 cut(s) 36, 438, 1135, 1987, 2442, 2477
BstSFI CTRYAG 3 cut(s) 756, 1394, 2237
BstSNI TACGTA 1 cut(s) 2360
BstX2I RGATCY 3 cut(s) 511, 967, 1363
BstXI CCANNNNNNTGG 2 cut(s) 978, 2018
BstYI RGATCY 3 cut(s) 511, 967, 1363
BstZI CGGCCG 1 cut(s) 1124
Bsu36I CCTNAGG 2 cut(s) 1112, 1524
BsuI GTATCC 2 cut(s) 683, 1104
BsuRI GGCC 9 cut(s) 555, 842, 982, 1126, 1132, 1861, 2385, 2482, 2556
BtgI CCRYGG 6 cut(s) 1026, 1127, 1222, 1265, 2260, 2661
BtgZI GCGATG 2 cut(s) 1493, 1683
BtsCI GGATG 8 cut(s) 903, 1024, 1275, 1385, 1804, 1805, 2097, 2476
BtsIMutI CAGTG 6 cut(s) 406, 1055, 1159, 1952, 2166, 2321
BveI ACCTGC 3 cut(s) 496, 1821, 1830
CfoI GCGC 2 cut(s) 999, 1531
Cfr10I RCCGGY 2 cut(s) 86, 2622
Cfr13I GGNCC 5 cut(s) 89, 631, 1937, 2257, 2307
CseI GACGC 2 cut(s) 194, 913
Csp6I GTAC 4 cut(s) 411, 847, 1318, 2022
CspCI CAANNNNNGTGG 2 cut(s) 1178, 1213
CviQI GTAC 4 cut(s) 411, 847, 1318, 2022
DpnI GATC 8 cut(s) 34, 513, 969, 1259, 1365, 1611, 2028, 2416
DpnII GATC 8 cut(s) 32, 511, 967, 1257, 1363, 1609, 2026, 2414
DraIII CACNNNGTG 1 cut(s) 244
EaeI YGGCCR 5 cut(s) 840, 1124, 1130, 1859, 2480
EagI CGGCCG 1 cut(s) 1124
Eam1104I CTCTTC 1 cut(s) 1642
EarI CTCTTC 1 cut(s) 1642
EciI GGCGGA 2 cut(s) 917, 1648
EclXI CGGCCG 1 cut(s) 1124
Eco105I TACGTA 1 cut(s) 2360
Eco130I CCWWGG 6 cut(s) 667, 806, 1174, 1265, 1489, 2260
Eco147I AGGCCT 1 cut(s) 2556
Eco24I GRGCYC 1 cut(s) 818
Eco31I GGTCTC 2 cut(s) 1212, 2259
Eco47I GGWCC 5 cut(s) 89, 631, 1937, 2257, 2307
Eco52I CGGCCG 1 cut(s) 1124
Eco57I CTGAAG 1 cut(s) 1535
Eco81I CCTNAGG 2 cut(s) 1112, 1524
Eco88I CYCGRG 3 cut(s) 1920, 2465, 2672
EcoNI CCTNNNNNAGG 1 cut(s) 2314
EcoO109I RGGNCCY 2 cut(s) 1937, 2307
EcoRI GAATTC 4 cut(s) 61, 1183, 1573, 1963
EcoRII CCWGG 4 cut(s) 36, 1135, 1987, 2477
EcoT14I CCWWGG 6 cut(s) 667, 806, 1174, 1265, 1489, 2260
EcoT22I ATGCAT 2 cut(s) 255, 875
EcoT38I GRGCYC 1 cut(s) 818
ErhI CCWWGG 6 cut(s) 667, 806, 1174, 1265, 1489, 2260
FaqI GGGAC 5 cut(s) 416, 756, 1178, 1950, 2561
FauI CCCGC 2 cut(s) 115, 2642
FbaI TGATCA 1 cut(s) 1609
FokI GGATG 8 cut(s) 910, 1031, 1282, 1372, 1792, 1811, 2104, 2483
FriOI GRGCYC 1 cut(s) 818
FspBI CTAG 5 cut(s) 965, 1827, 2006, 2211, 2558
GlaI GCGC 2 cut(s) 998, 1530
GsaI CCCAGC 1 cut(s) 1035
GsuI CTGGAG 4 cut(s) 642, 1917, 2190, 2229
HaeII RGCGCY 1 cut(s) 1000
HaeIII GGCC 9 cut(s) 555, 842, 982, 1126, 1132, 1861, 2385, 2482, 2556
HapII CCGG 6 cut(s) 87, 439, 676, 2443, 2483, 2623
HgaI GACGC 2 cut(s) 194, 913
HhaI GCGC 2 cut(s) 999, 1531
Hin1I GRCGYC 1 cut(s) 186
Hin6I GCGC 2 cut(s) 997, 1529
HinP1I GCGC 2 cut(s) 997, 1529
HincII GTYRAC 2 cut(s) 233, 2440
HindII GTYRAC 2 cut(s) 233, 2440
HpaII CCGG 6 cut(s) 87, 439, 676, 2443, 2483, 2623
HphI GGTGA 6 cut(s) 781, 1535, 1668, 2061, 2405, 2514
Hpy166II GTNNAC 2 cut(s) 233, 2440
Hpy188I TCNGA 9 cut(s) 67, 823, 897, 1452, 1572, 1726, 1852, 1962, 2586
Hpy188III TCNNGA 9 cut(s) 643, 676, 1346, 1371, 1499, 1896, 2246, 2351, 2634
Hpy8I GTNNAC 2 cut(s) 233, 2440
Hpy99I CGWCG 2 cut(s) 1172, 2612
HpyCH4III ACNGT 7 cut(s) 700, 1059, 1223, 1398, 1775, 1932, 1956
HpyCH4IV ACGT 4 cut(s) 845, 1103, 2359, 2657
HpySE526I ACGT 4 cut(s) 845, 1103, 2359, 2657
Hsp92I GRCGYC 1 cut(s) 186
HspAI GCGC 2 cut(s) 997, 1529
Kpn2I TCCGGA 1 cut(s) 675
KpnI GGTACC 1 cut(s) 2025
KroI GCCGGC 1 cut(s) 2622
KroNI GCCGGC 1 cut(s) 2624
Ksp22I TGATCA 1 cut(s) 1609
Kzo9I GATC 8 cut(s) 32, 511, 967, 1257, 1363, 1609, 2026, 2414
LmnI GCTCC 2 cut(s) 2353, 2595
LweI GCATC 7 cut(s) 173, 693, 888, 1260, 1276, 1431, 1576
MaeI CTAG 5 cut(s) 965, 1827, 2006, 2211, 2558
MaeII ACGT 4 cut(s) 845, 1103, 2359, 2657
MalI GATC 8 cut(s) 34, 513, 969, 1259, 1365, 1611, 2028, 2416
MbiI CCGCTC 1 cut(s) 1925
MboI GATC 8 cut(s) 32, 511, 967, 1257, 1363, 1609, 2026, 2414
MboII GAAGA 6 cut(s) 926, 1541, 1629, 1839, 2142, 2450
MfeI CAATTG 3 cut(s) 1559, 1878, 2119
MflI RGATCY 3 cut(s) 511, 967, 1363
MhlI GDGCHC 4 cut(s) 818, 1506, 2003, 2168
MlsI TGGCCA 3 cut(s) 842, 1132, 1861
MluNI TGGCCA 3 cut(s) 842, 1132, 1861
MlyI GAGTC 5 cut(s) 620, 1059, 1639, 2072, 2624
MmeI TCCRAC 2 cut(s) 94, 566
Mox20I TGGCCA 3 cut(s) 842, 1132, 1861
Mph1103I ATGCAT 2 cut(s) 255, 875
MroI TCCGGA 1 cut(s) 675
MroNI GCCGGC 1 cut(s) 2622
MroXI GAANNNNTTC 1 cut(s) 1577
MscI TGGCCA 3 cut(s) 842, 1132, 1861
MseI TTAA 6 cut(s) 500, 852, 1076, 1119, 1841, 2289
MslI CAYNNNNRTG 4 cut(s) 81, 258, 522, 1702
Msp20I TGGCCA 3 cut(s) 842, 1132, 1861
MspA1I CMGCKG 4 cut(s) 110, 446, 770, 2649
MspCI CTTAAG 1 cut(s) 1118
MspI CCGG 6 cut(s) 87, 439, 676, 2443, 2483, 2623
MspR9I CCNGG 6 cut(s) 38, 440, 1137, 1989, 2444, 2479
MunI CAATTG 3 cut(s) 1559, 1878, 2119
Mva1269I GAATGC 1 cut(s) 1233
MvaI CCWGG 4 cut(s) 38, 1137, 1989, 2479
NaeI GCCGGC 1 cut(s) 2624
NciI CCSGG 2 cut(s) 440, 2444
NcoI CCATGG 2 cut(s) 1265, 2260
NdeII GATC 8 cut(s) 32, 511, 967, 1257, 1363, 1609, 2026, 2414
NgoMIV GCCGGC 1 cut(s) 2622
NlaIV GGNNCC 7 cut(s) 569, 1739, 1938, 2023, 2234, 2308, 2591
NmuCI GTSAC 8 cut(s) 143, 244, 401, 959, 1674, 1693, 2319, 2667
NsiI ATGCAT 2 cut(s) 255, 875
NspI RCATGY 6 cut(s) 80, 257, 736, 873, 889, 1318
PaeI GCATGC 4 cut(s) 80, 257, 736, 889
PaeR7I CTCGAG 2 cut(s) 1920, 2672
PaqCI CACCTGC 2 cut(s) 496, 1821
PceI AGGCCT 1 cut(s) 2556
PciI ACATGT 1 cut(s) 1314
PctI GAATGC 1 cut(s) 1233
PdiI GCCGGC 1 cut(s) 2624
PdmI GAANNNNTTC 1 cut(s) 1577
PfeI GAWTC 7 cut(s) 655, 917, 1022, 1621, 1727, 1802, 2225
PflFI GACNNNGTC 1 cut(s) 629
PflMI CCANNNNNTGG 1 cut(s) 1327
PleI GAGTC 5 cut(s) 620, 1058, 1639, 2071, 2624
PpsI GAGTC 5 cut(s) 620, 1058, 1639, 2071, 2624
Ppu21I YACGTR 2 cut(s) 846, 2360
PpuMI RGGWCCY 2 cut(s) 1937, 2307
PscI ACATGT 1 cut(s) 1314
PshBI ATTAAT 1 cut(s) 1841
PsiI TTATAA 3 cut(s) 801, 2078, 2298
Psp5II RGGWCCY 2 cut(s) 1937, 2307
Psp6I CCWGG 4 cut(s) 36, 1135, 1987, 2477
PspFI CCCAGC 1 cut(s) 1031
PspGI CCWGG 4 cut(s) 36, 1135, 1987, 2477
PspN4I GGNNCC 7 cut(s) 569, 1739, 1938, 2023, 2234, 2308, 2591
PspPI GGNCC 5 cut(s) 89, 631, 1937, 2257, 2307
PspPPI RGGWCCY 2 cut(s) 1937, 2307
PspXI VCTCGAGB 2 cut(s) 1920, 2672
PstI CTGCAG 2 cut(s) 760, 2241
PsuI RGATCY 3 cut(s) 511, 967, 1363
PsyI GACNNNGTC 1 cut(s) 629
PvuII CAGCTG 2 cut(s) 446, 770
RsaI GTAC 4 cut(s) 412, 848, 1319, 2023
RsaNI GTAC 4 cut(s) 411, 847, 1318, 2022
RseI CAYNNNNRTG 4 cut(s) 81, 258, 522, 1702
SaqAI TTAA 6 cut(s) 500, 852, 1076, 1119, 1841, 2289
Sau3AI GATC 8 cut(s) 32, 511, 967, 1257, 1363, 1609, 2026, 2414
Sau96I GGNCC 5 cut(s) 89, 631, 1937, 2257, 2307
ScaI AGTACT 1 cut(s) 412
SchI GAGTC 5 cut(s) 620, 1059, 1639, 2072, 2624
ScrFI CCNGG 6 cut(s) 38, 440, 1137, 1989, 2444, 2479
SduI GDGCHC 4 cut(s) 818, 1506, 2003, 2168
SfaNI GCATC 7 cut(s) 173, 693, 888, 1260, 1276, 1431, 1576
SfcI CTRYAG 3 cut(s) 756, 1394, 2237
Sfr274I CTCGAG 2 cut(s) 1920, 2672
SinI GGWCC 5 cut(s) 89, 631, 1937, 2257, 2307
SlaI CTCGAG 2 cut(s) 1920, 2672
SmiMI CAYNNNNRTG 4 cut(s) 81, 258, 522, 1702
SmlI CTYRAG 6 cut(s) 138, 1118, 1920, 2632, 2641, 2672
SmoI CTYRAG 6 cut(s) 138, 1118, 1920, 2632, 2641, 2672
SnaBI TACGTA 1 cut(s) 2360
SphI GCATGC 4 cut(s) 80, 257, 736, 889
SseBI AGGCCT 1 cut(s) 2556
SspMI CTAG 5 cut(s) 965, 1827, 2006, 2211, 2558
StuI AGGCCT 1 cut(s) 2556
StyD4I CCNGG 6 cut(s) 36, 438, 1135, 1987, 2442, 2477
StyI CCWWGG 6 cut(s) 667, 806, 1174, 1265, 1489, 2260
TaaI ACNGT 7 cut(s) 700, 1059, 1223, 1398, 1775, 1932, 1956
TaiI ACGT 4 cut(s) 848, 1106, 2362, 2660
TaqI TCGA 4 cut(s) 31, 550, 1921, 2673
TaqII GACCGA 1 cut(s) 619
TatI WGTACW 1 cut(s) 410
TauI GCSGC 3 cut(s) 164, 933, 1126
TfiI GAWTC 7 cut(s) 655, 917, 1022, 1621, 1727, 1802, 2225
Tru1I TTAA 6 cut(s) 500, 852, 1076, 1119, 1841, 2289
Tru9I TTAA 6 cut(s) 500, 852, 1076, 1119, 1841, 2289
TscAI CASTG 6 cut(s) 406, 1062, 1159, 1959, 2173, 2328
TseFI GTSAC 8 cut(s) 143, 244, 401, 959, 1674, 1693, 2319, 2667
Tsp45I GTSAC 8 cut(s) 143, 244, 401, 959, 1674, 1693, 2319, 2667
TspGWI ACGGA 1 cut(s) 2650
TspRI CASTG 6 cut(s) 406, 1062, 1159, 1959, 2173, 2328
Tth111I GACNNNGTC 1 cut(s) 629
Van91I CCANNNNNTGG 1 cut(s) 1327
Vha464I CTTAAG 1 cut(s) 1118
VpaK11BI GGWCC 5 cut(s) 89, 631, 1937, 2257, 2307
VspI ATTAAT 1 cut(s) 1841
XagI CCTNNNNNAGG 1 cut(s) 2314
XapI RAATTY 5 cut(s) 61, 1183, 1573, 1963, 2281
XceI RCATGY 6 cut(s) 80, 257, 736, 873, 889, 1318
XhoI CTCGAG 2 cut(s) 1920, 2672
XmnI GAANNNNTTC 1 cut(s) 1577
XspI CTAG 5 cut(s) 965, 1827, 2006, 2211, 2558
ZrmI AGTACT 1 cut(s) 412
Zsp2I ATGCAT 2 cut(s) 255, 875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.