Rh2CG484400

Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
65006162 .. 65012462
6301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG484400.1

Sequence Viewer

Length: 2418 bp
ATGAGGCTTTCTTCTTCGTCTTCGTCTTCGGGGTTTAATAATCATCAGCCTCAGGAAGGGGAGAAGAAATGTTTGAATTCTGAGCTATGGCATGCGTGTGCGGGGCCTCTGGTGTCTCTGCCTGCTCTTGGTAGTCGCGTAGTCTACTTTCCGCAAGGTCACAGTGAGCAGGTTGCTGCATCAACCAATAAGGAAGTTGATGCCCATATTCCCAATTACCCAAACCTACCTCCACAACTAATTTGTCAACTTCACAATGTGACTATGCATGCCGATGTGGAGACGGATGAAGTATATGCTCAAATGACCCTGCAACCATTAAGTCCGGTATTGAATGAAAAGAATCAGTTGCTCTTGGGTATTCGGAGAGCAAATCGTCCGCAGACTGTTATGCCGTCGTCGGTTTTATCAAGCGATAGCATGCATATTGGTCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACAAATAGTCGGTTTACTATATTTTATAATCCAAGAGCAAGTCCTTCTGAATTTGTGATACCCCTGGCCAAGTATGTTAAAGCTGTCTATCATACACGTGTTTCTGTGGGAATGCGATTTAGGATGCTGTTTGAGACAGAAGAATCAAGTGTTCGCCGATACATGGGTACAATAACTGGCATCAGTGATTTAGATTCTGTTCGCTGGTCAAATTCACACTGGCGCTCTGTGAAGGTTGGCTGGGATGAATCCACTGCAGGGGAGAGGCAGCCAAGAGTTTCATTGTGGGAGATTGAACCGCTAACAACTTTTCCCATGTACCCTTCCCCATTCCCTCTCAGGCTGAAGCGACCATGGCCATCGGGCATGCCCTCTTTCCATGCGCTCAAAGATGGTGATATGGGCCTGAATGCTCCACTGATGTGGCTCCAAGGAGGGGTTGGAGATCCAGGGATGCAATCTTTGAATTTCCAGGGATTTGGGGTTACGCCCTGGATGCAGCCACGGCTTGATGCTTCTATGGCAGGTCTACAACCTGATGTATACCAAGCAATGGCAGCTGCTGCACTTCAAGAAATGAGGGCAGTGGATGCAAAATGTTCTTCGCAGTCGCTTCTACCCTTCCAGCAATCTTCAAATGTTTCAAATGGGCCTACTGCTATGCTTCAGAGACATAGTTTACCTCAGTCTCAGTCACAGAATACTTTTCTCCAGAGCTTTCAAGAAAACCAAGCTCCTGCTTCTCAGCTGTTGCAACAACAGTTGCGTTATCATCCATATAATAATGATCAGAGGCAGCAGCAGCAGCAGCAGCATCATCAACAGCAGCTGCACCAGCAACAGCACCAGCAGCTTCAACAGCAGCATCTTCAACAATCCCAGAATATGCACCAATTTTCAGTTCAGCAGCAGATTCCGAATGTAATGTCTTCTCTATCTAATTTTGCTACTCAATCTCAGTCTGCATCACTACAAGCTATTCCTTCACAAACTCAGCAGCAGAGCTTTCCTGAATCTGTTGGAAATGCTATATCTTCATCCGATGTTCCCCCTATACATAGCATATTAGGTTCACTATCACAGGATGGAGCATCCCAGTTACTTAACTTGAGTGGATCCAACACTGGAATATCTTCTACTTTGTTACCCAAGGTTGAATCACAGCTATCATCTGGGGCTGCTCAATGTGTACTCCCCCAAGTGGATCAGTTGGGAACACCACAGTCAAATATCTCCGAGCTCACTGCCTTGCCTCCATTTCCTGGCAGAGAGTACTCTTTCCAAGGTGCTACTGATCCCCAGAGCAATCTTTTGTTTGGGGTTAACATTGATGCCTCATCTCTAATGCTACAGAATGGGATACCAAATCTGAGAAATATTGGCAGTGGAACTGATTCATTGTCTATGCCGTTCGGTGCTTCAAATTATACCAGTGCAACAGGCAATGATTATCCACTTAATTCAGATATGACTACTTCAAGTTGTGTAGATGAATCAGGCTTCTTGCAGTCTTCAGAAAATGTGGACCAAGTAAATCCACCAACTCGAACCTTTGTGAAGGTTCATAAGTCGGGGTCCTTTGGGAGGTCACTGGATATTTCAAAATTCAGCAGCTACGATGAGCTGCGCAGTGAGCTCGGAAGCATGTTTGGCCTTGAAGGCCAATTAGAGGATCCTCAGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGGGAGAATGATGTTCTTCTCCTTGGTGACGACCCTTGGCAGGAGTTTGTGAACAATGTTTGGTATATCAAGATACTTTCTCCGCTTGAAGTGCAACAAATGGGAAAGGAAGGCCTCAATCGTGTGGCTTCTGTCCCAAGCCAAAAGCTTTCCAATGTCAGCAATACCTGTGATGACTACGTGAGCCGACAGGACTTGAGAAACGCAAGCAATGGGATTGCATCGCTGGGCTCCCTTGACTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

805

Amino Acids

88.63

Weight (kDa)

5.65

Isoelectric Point (pI)

68.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARF_AD PF06507 172 - 255 1.5e-33 Auxin response factor ancillary domain
AUX_IAA PF02309 663 - 752 1.3e-06 AUX/IAA family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 489
Acc16I TGCGCA 1 cut(s) 2090
Acc36I ACCTGC 2 cut(s) 160, 977
AccB7I CCANNNNNTGG 2 cut(s) 1015, 1724
AccI GTMKAC 3 cut(s) 144, 991, 1005
AccII CGCG 1 cut(s) 138
AciI CCGC 5 cut(s) 101, 152, 380, 761, 2255
AclWI GGATC 7 cut(s) 902, 1572, 1585, 1674, 1751, 2129, 2142
AcoI YGGCCR 2 cut(s) 528, 818
AcsI RAATTY 5 cut(s) 76, 512, 673, 928, 2066
AcuI CTGAAG 3 cut(s) 827, 1112, 1959
AcvI CACGTG 1 cut(s) 560
AdeI CACNNNGTG 1 cut(s) 259
AfaI GTAC 4 cut(s) 631, 782, 1653, 1736
AflIII ACRYGT 2 cut(s) 557, 559
AjnI CCWGG 5 cut(s) 525, 910, 933, 953, 1723
AjuI GAANNNNNNNTTGG 2 cut(s) 1347, 1379
AleI CACNNNNGTG 1 cut(s) 883
Alw21I GWGCWC 2 cut(s) 1704, 2100
Alw26I GTCTC 5 cut(s) 120, 275, 590, 1126, 1155
AlwI GGATC 7 cut(s) 902, 1572, 1585, 1674, 1751, 2129, 2142
AlwNI CAGNNNCTG 2 cut(s) 1025, 1291
AoxI GGCC 8 cut(s) 104, 528, 818, 865, 1112, 2113, 2122, 2284
ApoI RAATTY 5 cut(s) 76, 512, 673, 928, 2066
ArsI GACNNNNNNTTYG 2 cut(s) 1373, 1405
Asp700I GAANNNNTTC 2 cut(s) 1594, 1855
AspLEI GCGC 3 cut(s) 687, 847, 2091
AspS9I GGNCC 5 cut(s) 104, 865, 1112, 1987, 2037
AsuC2I CCSGG 1 cut(s) 2174
AsuHPI GGTGA 2 cut(s) 869, 2210
AvaII GGWCC 2 cut(s) 1987, 2037
AxyI CCTNAGG 1 cut(s) 51
BaeI ACNNNNGTAYC 2 cut(s) 613, 646
BalI TGGCCA 2 cut(s) 530, 820
BamHI GGATCC 2 cut(s) 1577, 2134
BanII GRGCYC 3 cut(s) 1704, 2100, 2405
BbrPI CACGTG 1 cut(s) 560
BbsI GAAGAC 5 cut(s) 12, 18, 425, 1383, 1965
Bbv12I GWGCWC 2 cut(s) 1704, 2100
BccI CCATC 3 cut(s) 829, 848, 1541
BceAI ACGGC 3 cut(s) 379, 983, 1855
BcgI CGANNNNNNTGC 4 cut(s) 1688, 1722, 2080, 2114
BciT130I CCWGG 5 cut(s) 527, 912, 935, 955, 1725
BciVI GTATCC 1 cut(s) 1815
BclI TGATCA 1 cut(s) 1249
BcnI CCSGG 1 cut(s) 2174
BcoDI GTCTC 5 cut(s) 120, 275, 590, 1126, 1155
BfmI CTRYAG 3 cut(s) 444, 717, 1811
BfoI RGCGCY 1 cut(s) 688
BfuAI ACCTGC 2 cut(s) 160, 977
BfuI GTATCC 1 cut(s) 1815
BglI GCCNNNNNGGC 1 cut(s) 2121
BmcAI AGTACT 1 cut(s) 1736
Bme1390I CCNGG 6 cut(s) 527, 912, 935, 955, 1725, 2174
Bme18I GGWCC 2 cut(s) 1987, 2037
BmgT120I GGNCC 5 cut(s) 104, 865, 1112, 1987, 2037
BmiI GGNNCC 6 cut(s) 105, 890, 1579, 2038, 2136, 2404
BmrFI CCNGG 6 cut(s) 527, 912, 935, 955, 1725, 2174
BmrI ACTGGG 1 cut(s) 1552
BmuI ACTGGG 1 cut(s) 1552
BpiI GAAGAC 5 cut(s) 12, 18, 425, 1383, 1965
BpmI CTGGAG 1 cut(s) 1157
BpuEI CTTGAG 2 cut(s) 1591, 2389
BpuMI CCSGG 1 cut(s) 2174
BsaAI YACGTR 2 cut(s) 560, 2353
BsaWI WCCGGW 1 cut(s) 325
Bse1I ACTGG 6 cut(s) 643, 686, 1558, 1591, 1893, 2058
Bse21I CCTNAGG 1 cut(s) 51
Bse3DI GCAATG 3 cut(s) 1020, 1912, 2389
BseBI CCWGG 5 cut(s) 527, 912, 935, 955, 1725
BseMI GCAATG 3 cut(s) 1020, 1912, 2389
BseNI ACTGG 6 cut(s) 643, 686, 1558, 1591, 1893, 2058
BseYI CCCAGC 2 cut(s) 702, 2398
BsgI GTGCAG 2 cut(s) 1011, 1277
Bsh1236I CGCG 1 cut(s) 138
BshFI GGCC 8 cut(s) 106, 530, 820, 867, 1114, 2115, 2124, 2286
BsiHKAI GWGCWC 2 cut(s) 1704, 2100
BsiSI CCGG 2 cut(s) 326, 2173
BslFI GGGAC 1 cut(s) 2291
BsmAI GTCTC 5 cut(s) 120, 275, 590, 1126, 1155
BsmBI CGTCTC 1 cut(s) 275
BsmFI GGGAC 1 cut(s) 2291
BsmI GAATGC 2 cut(s) 579, 877
BsnI GGCC 8 cut(s) 106, 530, 820, 867, 1114, 2115, 2124, 2286
Bsp1286I GDGCHC 3 cut(s) 1704, 2100, 2405
Bsp143I GATC 7 cut(s) 907, 1249, 1577, 1666, 1756, 2134, 2144
Bsp19I CCATGG 1 cut(s) 815
BspACI CCGC 5 cut(s) 101, 152, 380, 761, 2255
BspANI GGCC 8 cut(s) 106, 530, 820, 867, 1114, 2115, 2124, 2286
BspFNI CGCG 1 cut(s) 138
BspLI GGNNCC 6 cut(s) 105, 890, 1579, 2038, 2136, 2404
BspMAI CTGCAG 2 cut(s) 448, 721
BspMI ACCTGC 2 cut(s) 160, 977
BspPI GGATC 7 cut(s) 902, 1572, 1585, 1674, 1751, 2129, 2142
BsrDI GCAATG 3 cut(s) 1020, 1912, 2389
BsrI ACTGG 6 cut(s) 643, 686, 1558, 1591, 1893, 2058
BssMI GATC 7 cut(s) 907, 1249, 1577, 1666, 1756, 2134, 2144
BssNAI GTATAC 1 cut(s) 1006
BssT1I CCWWGG 6 cut(s) 815, 892, 1611, 1744, 2194, 2207
Bst1107I GTATAC 1 cut(s) 1006
Bst2UI CCWGG 5 cut(s) 527, 912, 935, 955, 1725
Bst4CI ACNGT 4 cut(s) 164, 388, 1224, 1686
BstAPI GCANNNNNTGC 3 cut(s) 452, 1025, 1052
BstBAI YACGTR 2 cut(s) 560, 2353
BstC8I GCNNGC 7 cut(s) 93, 123, 270, 422, 830, 2153, 2380
BstDSI CCRYGG 2 cut(s) 815, 965
BstENI CCTNNNNNAGG 2 cut(s) 54, 2044
BstFNI CGCG 1 cut(s) 138
BstH2I RGCGCY 1 cut(s) 688
BstHHI GCGC 3 cut(s) 687, 847, 2091
BstKTI GATC 7 cut(s) 910, 1252, 1580, 1669, 1759, 2137, 2147
BstMAI GTCTC 5 cut(s) 120, 275, 590, 1126, 1155
BstMBI GATC 7 cut(s) 907, 1249, 1577, 1666, 1756, 2134, 2144
BstNI CCWGG 5 cut(s) 527, 912, 935, 955, 1725
BstNSI RCATGY 5 cut(s) 95, 272, 424, 832, 2110
BstSCI CCNGG 6 cut(s) 525, 910, 933, 953, 1723, 2172
BstSFI CTRYAG 3 cut(s) 444, 717, 1811
BstUI CGCG 1 cut(s) 138
BstV2I GAAGAC 5 cut(s) 12, 18, 425, 1383, 1965
BstX2I RGATCY 3 cut(s) 907, 1577, 2134
BstXI CCANNNNNNTGG 2 cut(s) 885, 941
BstYI RGATCY 3 cut(s) 907, 1577, 2134
BstZ17I GTATAC 1 cut(s) 1006
Bsu36I CCTNAGG 1 cut(s) 51
BsuI GTATCC 1 cut(s) 1815
BsuRI GGCC 8 cut(s) 106, 530, 820, 867, 1114, 2115, 2124, 2286
BtgI CCRYGG 2 cut(s) 815, 965
BtgZI GCGATG 1 cut(s) 2379
BtsI GCAGTG 5 cut(s) 714, 1053, 1704, 1852, 2098
BveI ACCTGC 2 cut(s) 160, 977
Cac8I GCNNGC 7 cut(s) 93, 123, 270, 422, 830, 2153, 2380
CaiI CAGNNNCTG 2 cut(s) 1025, 1291
CfoI GCGC 3 cut(s) 687, 847, 2091
Cfr13I GGNCC 5 cut(s) 104, 865, 1112, 1987, 2037
Csp6I GTAC 4 cut(s) 630, 781, 1652, 1735
CviQI GTAC 4 cut(s) 630, 781, 1652, 1735
DpnI GATC 7 cut(s) 909, 1251, 1579, 1668, 1758, 2136, 2146
DpnII GATC 7 cut(s) 907, 1249, 1577, 1666, 1756, 2134, 2144
DraIII CACNNNGTG 1 cut(s) 259
EaeI YGGCCR 2 cut(s) 528, 818
Ecl136II GAGCTC 2 cut(s) 1702, 2098
Eco130I CCWWGG 6 cut(s) 815, 892, 1611, 1744, 2194, 2207
Eco147I AGGCCT 1 cut(s) 2286
Eco24I GRGCYC 3 cut(s) 1704, 2100, 2405
Eco47I GGWCC 2 cut(s) 1987, 2037
Eco53kI GAGCTC 2 cut(s) 1702, 2098
Eco57I CTGAAG 3 cut(s) 827, 1112, 1959
Eco72I CACGTG 1 cut(s) 560
Eco81I CCTNAGG 1 cut(s) 51
EcoICRI GAGCTC 2 cut(s) 1702, 2098
EcoNI CCTNNNNNAGG 2 cut(s) 54, 2044
EcoO109I RGGNCCY 2 cut(s) 104, 2037
EcoRI GAATTC 1 cut(s) 76
EcoRII CCWGG 5 cut(s) 525, 910, 933, 953, 1723
EcoT14I CCWWGG 6 cut(s) 815, 892, 1611, 1744, 2194, 2207
EcoT22I ATGCAT 2 cut(s) 270, 426
EcoT38I GRGCYC 3 cut(s) 1704, 2100, 2405
ErhI CCWWGG 6 cut(s) 815, 892, 1611, 1744, 2194, 2207
Esp3I CGTCTC 1 cut(s) 275
FaqI GGGAC 1 cut(s) 2291
FauI CCCGC 1 cut(s) 94
FbaI TGATCA 1 cut(s) 1249
FblI GTMKAC 3 cut(s) 144, 991, 1005
FriOI GRGCYC 3 cut(s) 1704, 2100, 2405
FspI TGCGCA 1 cut(s) 2090
GlaI GCGC 3 cut(s) 686, 846, 2090
GsaI CCCAGC 2 cut(s) 706, 2402
GsuI CTGGAG 1 cut(s) 1157
HaeII RGCGCY 1 cut(s) 688
HaeIII GGCC 8 cut(s) 106, 530, 820, 867, 1114, 2115, 2124, 2286
HapII CCGG 2 cut(s) 326, 2173
HhaI GCGC 3 cut(s) 687, 847, 2091
Hin6I GCGC 3 cut(s) 685, 845, 2089
HinP1I GCGC 3 cut(s) 685, 845, 2089
HincII GTYRAC 3 cut(s) 248, 1786, 2170
HindII GTYRAC 3 cut(s) 248, 1786, 2170
HindIII AAGCTT 1 cut(s) 2318
HinfI GANTC 9 cut(s) 343, 605, 656, 710, 1375, 1475, 1619, 1856, 1955
HpaI GTTAAC 1 cut(s) 1786
HpaII CCGG 2 cut(s) 326, 2173
HphI GGTGA 2 cut(s) 869, 2210
Hpy188III TCNNGA 6 cut(s) 53, 1034, 1174, 1184, 1472, 2242
Hpy99I CGWCG 2 cut(s) 400, 403
HpyAV CCTTC 9 cut(s) 50, 516, 688, 795, 1093, 1455, 2014, 2114, 2276
HpyCH4III ACNGT 4 cut(s) 164, 388, 1224, 1686
HpyCH4IV ACGT 2 cut(s) 559, 2352
HpySE526I ACGT 2 cut(s) 559, 2352
HspAI GCGC 3 cut(s) 685, 845, 2089
Ksp22I TGATCA 1 cut(s) 1249
KspAI GTTAAC 1 cut(s) 1786
Kzo9I GATC 7 cut(s) 907, 1249, 1577, 1666, 1756, 2134, 2144
LmnI GCTCC 5 cut(s) 880, 894, 1201, 1550, 2408
MaeII ACGT 2 cut(s) 559, 2352
MaeIII GTNAC 8 cut(s) 158, 259, 946, 1155, 1560, 1605, 2049, 2198
MalI GATC 7 cut(s) 909, 1251, 1579, 1668, 1758, 2136, 2146
MboI GATC 7 cut(s) 907, 1249, 1577, 1666, 1756, 2134, 2144
MflI RGATCY 3 cut(s) 907, 1577, 2134
MhlI GDGCHC 3 cut(s) 1704, 2100, 2405
MlsI TGGCCA 2 cut(s) 530, 820
MluNI TGGCCA 2 cut(s) 530, 820
MmeI TCCRAC 3 cut(s) 883, 1462, 1605
Mox20I TGGCCA 2 cut(s) 530, 820
Mph1103I ATGCAT 2 cut(s) 270, 426
MroXI GAANNNNTTC 2 cut(s) 1594, 1855
MscI TGGCCA 2 cut(s) 530, 820
MseI TTAA 6 cut(s) 36, 320, 540, 1566, 1785, 1920
MslI CAYNNNNRTG 4 cut(s) 96, 273, 558, 883
Msp20I TGGCCA 2 cut(s) 530, 820
MspA1I CMGCKG 4 cut(s) 458, 1022, 1210, 1291
MspI CCGG 2 cut(s) 326, 2173
MspR9I CCNGG 6 cut(s) 527, 912, 935, 955, 1725, 2174
Mva1269I GAATGC 2 cut(s) 579, 877
MvaI CCWGG 5 cut(s) 527, 912, 935, 955, 1725
MvnI CGCG 1 cut(s) 138
NciI CCSGG 1 cut(s) 2174
NcoI CCATGG 1 cut(s) 815
NdeII GATC 7 cut(s) 907, 1249, 1577, 1666, 1756, 2134, 2144
NlaIV GGNNCC 6 cut(s) 105, 890, 1579, 2038, 2136, 2404
NmuCI GTSAC 5 cut(s) 158, 259, 1155, 2049, 2198
NsbI TGCGCA 1 cut(s) 2090
NsiI ATGCAT 2 cut(s) 270, 426
NspI RCATGY 5 cut(s) 95, 272, 424, 832, 2110
OliI CACNNNNGTG 1 cut(s) 883
PaeI GCATGC 4 cut(s) 95, 272, 424, 832
PceI AGGCCT 1 cut(s) 2286
PctI GAATGC 2 cut(s) 579, 877
PdmI GAANNNNTTC 2 cut(s) 1594, 1855
PfeI GAWTC 9 cut(s) 343, 605, 656, 710, 1375, 1475, 1619, 1856, 1955
PflMI CCANNNNNTGG 2 cut(s) 1015, 1724
PmaCI CACGTG 1 cut(s) 560
PmlI CACGTG 1 cut(s) 560
Ppu21I YACGTR 2 cut(s) 560, 2353
PpuMI RGGWCCY 1 cut(s) 2037
PsiI TTATAA 1 cut(s) 489
Psp124BI GAGCTC 2 cut(s) 1704, 2100
Psp5II RGGWCCY 1 cut(s) 2037
Psp6I CCWGG 5 cut(s) 525, 910, 933, 953, 1723
PspCI CACGTG 1 cut(s) 560
PspFI CCCAGC 2 cut(s) 702, 2398
PspGI CCWGG 5 cut(s) 525, 910, 933, 953, 1723
PspN4I GGNNCC 6 cut(s) 105, 890, 1579, 2038, 2136, 2404
PspPI GGNCC 5 cut(s) 104, 865, 1112, 1987, 2037
PspPPI RGGWCCY 1 cut(s) 2037
PstI CTGCAG 2 cut(s) 448, 721
PstNI CAGNNNCTG 2 cut(s) 1025, 1291
PsuI RGATCY 3 cut(s) 907, 1577, 2134
PvuII CAGCTG 4 cut(s) 458, 1022, 1210, 1291
RsaI GTAC 4 cut(s) 631, 782, 1653, 1736
RsaNI GTAC 4 cut(s) 630, 781, 1652, 1735
RseI CAYNNNNRTG 4 cut(s) 96, 273, 558, 883
SacI GAGCTC 2 cut(s) 1704, 2100
SaqAI TTAA 6 cut(s) 36, 320, 540, 1566, 1785, 1920
Sau3AI GATC 7 cut(s) 907, 1249, 1577, 1666, 1756, 2134, 2144
Sau96I GGNCC 5 cut(s) 104, 865, 1112, 1987, 2037
ScaI AGTACT 1 cut(s) 1736
ScrFI CCNGG 6 cut(s) 527, 912, 935, 955, 1725, 2174
SduI GDGCHC 3 cut(s) 1704, 2100, 2405
SfcI CTRYAG 3 cut(s) 444, 717, 1811
SfiI GGCCNNNNNGGCC 1 cut(s) 2121
SinI GGWCC 2 cut(s) 1987, 2037
SmiMI CAYNNNNRTG 4 cut(s) 96, 273, 558, 883
SmlI CTYRAG 2 cut(s) 1570, 2368
SmoI CTYRAG 2 cut(s) 1570, 2368
SphI GCATGC 4 cut(s) 95, 272, 424, 832
SseBI AGGCCT 1 cut(s) 2286
SsiI CCGC 5 cut(s) 101, 152, 380, 761, 2255
SspI AATATT 1 cut(s) 1840
SstI GAGCTC 2 cut(s) 1704, 2100
StuI AGGCCT 1 cut(s) 2286
StyD4I CCNGG 6 cut(s) 525, 910, 933, 953, 1723, 2172
StyI CCWWGG 6 cut(s) 815, 892, 1611, 1744, 2194, 2207
TaaI ACNGT 4 cut(s) 164, 388, 1224, 1686
TaiI ACGT 2 cut(s) 562, 2355
TaqI TCGA 1 cut(s) 2008
TatI WGTACW 2 cut(s) 1651, 1734
TfiI GAWTC 9 cut(s) 343, 605, 656, 710, 1375, 1475, 1619, 1856, 1955
Tru1I TTAA 6 cut(s) 36, 320, 540, 1566, 1785, 1920
Tru9I TTAA 6 cut(s) 36, 320, 540, 1566, 1785, 1920
TseFI GTSAC 5 cut(s) 158, 259, 1155, 2049, 2198
Tsp45I GTSAC 5 cut(s) 158, 259, 1155, 2049, 2198
TspDTI ATGAA 8 cut(s) 303, 351, 723, 732, 1488, 1848, 1968, 2015
TspGWI ACGGA 1 cut(s) 299
Van91I CCANNNNNTGG 2 cut(s) 1015, 1724
VpaK11BI GGWCC 2 cut(s) 1987, 2037
XagI CCTNNNNNAGG 2 cut(s) 54, 2044
XapI RAATTY 5 cut(s) 76, 512, 673, 928, 2066
XceI RCATGY 5 cut(s) 95, 272, 424, 832, 2110
XcmI CCANNNNNNNNNTGG 1 cut(s) 899
XmiI GTMKAC 3 cut(s) 144, 991, 1005
XmnI GAANNNNTTC 2 cut(s) 1594, 1855
ZrmI AGTACT 1 cut(s) 1736
Zsp2I ATGCAT 2 cut(s) 270, 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.