Regulator of Vps4 activity in the MVB pathway
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G52315 AT1G52315 AT1G79910 AT1G79910 AT1G79910 |
| fragaria_vesca | FvH4_6g31290 FvH4_6g31290 |
| malus_domestica | MD09G1212300.v1.1 MD17G1194200.v1.1 |
| prunus_persica | Prupe.3G070200_v2.0.a1 Prupe.3G070200_v2.0.a1 Prupe.3G070200_v2.0.a1 Prupe.3G070200_v2.0.a1 Prupe.3G070200_v2.0.a1 |
| pyrus_communis | pycom09g12950 |
| rosa_chinensis | RchiOBHm_Chr2g0138021 RchiOBHm_Chr6g0262501 |
| rosa_laevigata | RLG00000014421 RLG00000019713 |
| rosa_multiflora | Rmu_sc0000596.1_g000009 Rmu_sc0006745.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00106570 Rroxscaffold_7G00205210 |
| rosa_rugosa | Rorug02G0349100 |
| rosa_samantha | Rh2AG115900 Rh2AG395800 Rh2BG410900 Rh2CG382300 Rh2DG417600 Rh6BG112900 Rh6CG111200 Rh6DG100900 |
| rosa_wichuraiana | Rw2G032320 Rw6G010270 Rw6G010710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 570 |
| Acc36I | ACCTGC | 1 cut(s) | 570 |
| AccB1I | GGYRCC | 1 cut(s) | 1234 |
| AccBSI | CCGCTC | 1 cut(s) | 1331 |
| AccII | CGCG | 2 cut(s) | 101, 360 |
| AciI | CCGC | 5 cut(s) | 70, 101, 358, 791, 1329 |
| AclWI | GGATC | 1 cut(s) | 80 |
| AcoI | YGGCCR | 2 cut(s) | 148, 1249 |
| AcsI | RAATTY | 3 cut(s) | 26, 394, 497 |
| AcuI | CTGAAG | 1 cut(s) | 198 |
| AcvI | CACGTG | 1 cut(s) | 1282 |
| AfaI | GTAC | 4 cut(s) | 323, 389, 775, 1304 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 971, 1111 |
| AgsI | TTSAA | 9 cut(s) | 118, 315, 439, 509, 519, 759, 961, 1029, 1227 |
| AjiI | CACGTC | 1 cut(s) | 877 |
| AjnI | CCWGG | 1 cut(s) | 970 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 739, 771 |
| AluBI | AGCT | 7 cut(s) | 131, 231, 305, 694, 762, 1294, 1319 |
| AluI | AGCT | 7 cut(s) | 131, 231, 305, 694, 762, 1294, 1319 |
| Alw21I | GWGCWC | 2 cut(s) | 1281, 1287 |
| Alw44I | GTGCAC | 2 cut(s) | 1277, 1283 |
| AlwI | GGATC | 1 cut(s) | 80 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 538 |
| AoxI | GGCC | 3 cut(s) | 148, 571, 1249 |
| ApaLI | GTGCAC | 2 cut(s) | 1277, 1283 |
| ApeKI | GCWGC | 6 cut(s) | 326, 329, 694, 702, 870, 1316 |
| ApoI | RAATTY | 3 cut(s) | 26, 394, 497 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 183, 306, 408 |
| AspLEI | GCGC | 2 cut(s) | 101, 579 |
| AsuC2I | CCSGG | 1 cut(s) | 781 |
| AsuHPI | GGTGA | 4 cut(s) | 25, 683, 887, 1080 |
| AxyI | CCTNAGG | 1 cut(s) | 288 |
| BaeGI | GKGCMC | 3 cut(s) | 287, 1281, 1287 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 714, 747 |
| BanI | GGYRCC | 1 cut(s) | 1234 |
| BbrPI | CACGTG | 1 cut(s) | 1282 |
| BbsI | GAAGAC | 1 cut(s) | 717 |
| Bbv12I | GWGCWC | 2 cut(s) | 1281, 1287 |
| BbvCI | CCTCAGC | 1 cut(s) | 5 |
| BbvI | GCAGC | 6 cut(s) | 338, 341, 681, 714, 882, 1328 |
| BccI | CCATC | 1 cut(s) | 1049 |
| BceAI | ACGGC | 2 cut(s) | 135, 184 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 49, 83, 859, 893, 1115, 1149 |
| BciT130I | CCWGG | 1 cut(s) | 972 |
| BciVI | GTATCC | 2 cut(s) | 742, 787 |
| BcnI | CCSGG | 1 cut(s) | 781 |
| BfaI | CTAG | 3 cut(s) | 188, 900, 1005 |
| BfmI | CTRYAG | 1 cut(s) | 695 |
| BfuAI | ACCTGC | 1 cut(s) | 570 |
| BfuI | GTATCC | 2 cut(s) | 742, 787 |
| BglII | AGATCT | 2 cut(s) | 587, 1166 |
| BisI | GCNGC | 7 cut(s) | 327, 330, 695, 703, 871, 1317, 1329 |
| BlsI | GCNGC | 7 cut(s) | 328, 331, 696, 704, 872, 1318, 1330 |
| Bme1390I | CCNGG | 2 cut(s) | 781, 972 |
| BmgBI | CACGTC | 1 cut(s) | 877 |
| BmiI | GGNNCC | 2 cut(s) | 1182, 1236 |
| BmrFI | CCNGG | 2 cut(s) | 781, 972 |
| BmsI | GCATC | 8 cut(s) | 57, 230, 252, 569, 795, 1056, 1123, 1205 |
| BpiI | GAAGAC | 1 cut(s) | 717 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 659, 691 |
| BpmI | CTGGAG | 1 cut(s) | 576 |
| Bpu10I | CCTNAGC | 1 cut(s) | 5 |
| BpuMI | CCSGG | 1 cut(s) | 781 |
| BsaAI | YACGTR | 1 cut(s) | 1282 |
| BsaBI | GATNNNNATC | 1 cut(s) | 71 |
| BsaJI | CCNNGG | 3 cut(s) | 525, 568, 780 |
| BsaWI | WCCGGW | 1 cut(s) | 1297 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 136, 166, 535, 565 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 971, 1111 |
| Bse1I | ACTGG | 3 cut(s) | 561, 593, 1317 |
| Bse21I | CCTNAGG | 1 cut(s) | 288 |
| Bse8I | GATNNNNATC | 1 cut(s) | 71 |
| BseBI | CCWGG | 1 cut(s) | 972 |
| BseDI | CCNNGG | 3 cut(s) | 525, 568, 780 |
| BseGI | GGATG | 4 cut(s) | 245, 776, 790, 1060 |
| BseJI | GATNNNNATC | 1 cut(s) | 71 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 971, 1111 |
| BseMII | CTCAG | 4 cut(s) | 216, 279, 379, 1184 |
| BseNI | ACTGG | 3 cut(s) | 561, 593, 1317 |
| BseRI | GAGGAG | 4 cut(s) | 109, 157, 680, 1026 |
| BseSI | GKGCMC | 3 cut(s) | 287, 1281, 1287 |
| BseXI | GCAGC | 6 cut(s) | 338, 341, 681, 714, 882, 1328 |
| BsgI | GTGCAG | 2 cut(s) | 125, 604 |
| Bsh1236I | CGCG | 2 cut(s) | 101, 360 |
| BshFI | GGCC | 3 cut(s) | 150, 573, 1251 |
| BshNI | GGYRCC | 1 cut(s) | 1234 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1281, 1287 |
| BsiSI | CCGG | 2 cut(s) | 780, 1298 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 971, 1111 |
| BsmI | GAATGC | 2 cut(s) | 299, 644 |
| BsnI | GGCC | 3 cut(s) | 150, 573, 1251 |
| Bsp1286I | GDGCHC | 3 cut(s) | 287, 1281, 1287 |
| Bsp143I | GATC | 6 cut(s) | 72, 133, 587, 892, 938, 1166 |
| BspACI | CCGC | 5 cut(s) | 70, 101, 358, 791, 1329 |
| BspANI | GGCC | 3 cut(s) | 150, 573, 1251 |
| BspCNI | CTCAG | 4 cut(s) | 217, 280, 378, 1183 |
| BspFNI | CGCG | 2 cut(s) | 101, 360 |
| BspHI | TCATGA | 1 cut(s) | 976 |
| BspLI | GGNNCC | 2 cut(s) | 1182, 1236 |
| BspMAI | CTGCAG | 1 cut(s) | 699 |
| BspMI | ACCTGC | 1 cut(s) | 570 |
| BspPI | GGATC | 1 cut(s) | 80 |
| BspQI | GCTCTTC | 1 cut(s) | 113 |
| BspT107I | GGYRCC | 1 cut(s) | 1234 |
| BsrBI | CCGCTC | 1 cut(s) | 1331 |
| BsrI | ACTGG | 3 cut(s) | 561, 593, 1317 |
| BssECI | CCNNGG | 3 cut(s) | 525, 568, 780 |
| BssMI | GATC | 6 cut(s) | 72, 133, 587, 892, 938, 1166 |
| BssT1I | CCWWGG | 2 cut(s) | 525, 568 |
| Bst2UI | CCWGG | 1 cut(s) | 972 |
| Bst4CI | ACNGT | 1 cut(s) | 1086 |
| Bst6I | CTCTTC | 4 cut(s) | 86, 113, 647, 1035 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 338 |
| BstBAI | YACGTR | 1 cut(s) | 1282 |
| BstC8I | GCNNGC | 1 cut(s) | 575 |
| BstDEI | CTNAG | 6 cut(s) | 5, 225, 288, 365, 1170, 1334 |
| BstF5I | GGATG | 4 cut(s) | 245, 776, 790, 1060 |
| BstFNI | CGCG | 2 cut(s) | 101, 360 |
| BstHHI | GCGC | 2 cut(s) | 101, 579 |
| BstKTI | GATC | 6 cut(s) | 75, 136, 590, 895, 941, 1169 |
| BstMBI | GATC | 6 cut(s) | 72, 133, 587, 892, 938, 1166 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 338, 1066, 1187, 1291, 1325 |
| BstNI | CCWGG | 1 cut(s) | 972 |
| BstSCI | CCNGG | 2 cut(s) | 779, 970 |
| BstSFI | CTRYAG | 1 cut(s) | 695 |
| BstSLI | GKGCMC | 3 cut(s) | 287, 1281, 1287 |
| BstUI | CGCG | 2 cut(s) | 101, 360 |
| BstV1I | GCAGC | 6 cut(s) | 338, 341, 681, 714, 882, 1328 |
| BstV2I | GAAGAC | 1 cut(s) | 717 |
| BstX2I | RGATCY | 2 cut(s) | 587, 1166 |
| BstYI | RGATCY | 2 cut(s) | 587, 1166 |
| Bsu36I | CCTNAGG | 1 cut(s) | 288 |
| BsuI | GTATCC | 2 cut(s) | 742, 787 |
| BsuRI | GGCC | 3 cut(s) | 150, 573, 1251 |
| BtgZI | GCGATG | 2 cut(s) | 618, 918 |
| BtrI | CACGTC | 1 cut(s) | 877 |
| BtsCI | GGATG | 4 cut(s) | 245, 776, 790, 1060 |
| BtsI | GCAGTG | 1 cut(s) | 712 |
| BtsIMutI | CAGTG | 2 cut(s) | 554, 712 |
| BveI | ACCTGC | 1 cut(s) | 570 |
| Cac8I | GCNNGC | 1 cut(s) | 575 |
| CaiI | CAGNNNCTG | 1 cut(s) | 538 |
| CciI | TCATGA | 1 cut(s) | 976 |
| CfoI | GCGC | 2 cut(s) | 101, 579 |
| CsiI | ACCWGGT | 1 cut(s) | 970 |
| Csp6I | GTAC | 4 cut(s) | 322, 388, 774, 1303 |
| CviAII | CATG | 3 cut(s) | 977, 1149, 1247 |
| CviQI | GTAC | 4 cut(s) | 322, 388, 774, 1303 |
| DdeI | CTNAG | 6 cut(s) | 5, 225, 288, 365, 1170, 1334 |
| DpnI | GATC | 6 cut(s) | 74, 135, 589, 894, 940, 1168 |
| DpnII | GATC | 6 cut(s) | 72, 133, 587, 892, 938, 1166 |
| EaeI | YGGCCR | 2 cut(s) | 148, 1249 |
| Eam1104I | CTCTTC | 4 cut(s) | 86, 113, 647, 1035 |
| EarI | CTCTTC | 4 cut(s) | 86, 113, 647, 1035 |
| Eco130I | CCWWGG | 2 cut(s) | 525, 568 |
| Eco57I | CTGAAG | 1 cut(s) | 198 |
| Eco72I | CACGTG | 1 cut(s) | 1282 |
| Eco81I | CCTNAGG | 1 cut(s) | 288 |
| EcoRII | CCWGG | 1 cut(s) | 970 |
| EcoT14I | CCWWGG | 2 cut(s) | 525, 568 |
| EcoT22I | ATGCAT | 4 cut(s) | 166, 245, 646, 1071 |
| ErhI | CCWWGG | 2 cut(s) | 525, 568 |
| FaeI | CATG | 3 cut(s) | 980, 1152, 1250 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 794, 826 |
| FatI | CATG | 3 cut(s) | 976, 1148, 1246 |
| Fnu4HI | GCNGC | 7 cut(s) | 327, 330, 695, 703, 871, 1317, 1329 |
| FokI | GGATG | 4 cut(s) | 252, 763, 797, 1067 |
| Fsp4HI | GCNGC | 7 cut(s) | 327, 330, 695, 703, 871, 1317, 1329 |
| FspBI | CTAG | 3 cut(s) | 188, 900, 1005 |
| GlaI | GCGC | 2 cut(s) | 100, 578 |
| GluI | GCNGC | 7 cut(s) | 327, 330, 695, 703, 871, 1317, 1329 |
| GsuI | CTGGAG | 1 cut(s) | 576 |
| HaeIII | GGCC | 3 cut(s) | 150, 573, 1251 |
| HapII | CCGG | 2 cut(s) | 780, 1298 |
| HhaI | GCGC | 2 cut(s) | 101, 579 |
| Hin1II | CATG | 3 cut(s) | 980, 1152, 1250 |
| Hin6I | GCGC | 2 cut(s) | 99, 577 |
| HinP1I | GCGC | 2 cut(s) | 99, 577 |
| HincII | GTYRAC | 1 cut(s) | 598 |
| HindII | GTYRAC | 1 cut(s) | 598 |
| HinfI | GANTC | 8 cut(s) | 218, 250, 469, 515, 674, 982, 1025, 1142 |
| HpaII | CCGG | 2 cut(s) | 780, 1298 |
| HphI | GGTGA | 4 cut(s) | 25, 683, 887, 1080 |
| Hpy166II | GTNNAC | 3 cut(s) | 598, 1279, 1285 |
| Hpy188I | TCNGA | 6 cut(s) | 17, 49, 276, 368, 414, 565 |
| Hpy188III | TCNNGA | 5 cut(s) | 247, 649, 849, 977, 1121 |
| Hpy8I | GTNNAC | 3 cut(s) | 598, 1279, 1285 |
| Hpy99I | CGWCG | 2 cut(s) | 64, 881 |
| HpyAV | CCTTC | 5 cut(s) | 173, 451, 820, 1105, 1273 |
| HpyCH4III | ACNGT | 1 cut(s) | 1086 |
| HpyCH4IV | ACGT | 2 cut(s) | 876, 1281 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 338, 1066, 1187, 1291, 1325 |
| HpyF3I | CTNAG | 6 cut(s) | 5, 225, 288, 365, 1170, 1334 |
| HpySE526I | ACGT | 2 cut(s) | 876, 1281 |
| Hsp92II | CATG | 3 cut(s) | 980, 1152, 1250 |
| HspAI | GCGC | 2 cut(s) | 99, 577 |
| Kzo9I | GATC | 6 cut(s) | 72, 133, 587, 892, 938, 1166 |
| LguI | GCTCTTC | 1 cut(s) | 113 |
| LmnI | GCTCC | 2 cut(s) | 96, 1186 |
| Lsp1109I | GCAGC | 6 cut(s) | 338, 341, 681, 714, 882, 1328 |
| LweI | GCATC | 8 cut(s) | 57, 230, 252, 569, 795, 1056, 1123, 1205 |
| MabI | ACCWGGT | 1 cut(s) | 970 |
| MaeI | CTAG | 3 cut(s) | 188, 900, 1005 |
| MaeII | ACGT | 2 cut(s) | 876, 1281 |
| MaeIII | GTNAC | 5 cut(s) | 31, 152, 212, 671, 1086 |
| MalI | GATC | 6 cut(s) | 74, 135, 589, 894, 940, 1168 |
| MbiI | CCGCTC | 1 cut(s) | 1331 |
| MboI | GATC | 6 cut(s) | 72, 133, 587, 892, 938, 1166 |
| MfeI | CAATTG | 1 cut(s) | 1227 |
| MflI | RGATCY | 2 cut(s) | 587, 1166 |
| MhlI | GDGCHC | 3 cut(s) | 287, 1281, 1287 |
| MluCI | AATT | 7 cut(s) | 26, 315, 394, 497, 1097, 1227, 1323 |
| MlyI | GAGTC | 2 cut(s) | 244, 668 |
| Mph1103I | ATGCAT | 4 cut(s) | 166, 245, 646, 1071 |
| MroXI | GAANNNNTTC | 3 cut(s) | 183, 306, 408 |
| MseI | TTAA | 1 cut(s) | 476 |
| MspI | CCGG | 2 cut(s) | 780, 1298 |
| MspR9I | CCNGG | 2 cut(s) | 781, 972 |
| MunI | CAATTG | 1 cut(s) | 1227 |
| Mva1269I | GAATGC | 2 cut(s) | 299, 644 |
| MvaI | CCWGG | 1 cut(s) | 972 |
| MvnI | CGCG | 2 cut(s) | 101, 360 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 338, 1066, 1187, 1291, 1325 |
| NciI | CCSGG | 1 cut(s) | 781 |
| NdeII | GATC | 6 cut(s) | 72, 133, 587, 892, 938, 1166 |
| NlaIII | CATG | 3 cut(s) | 980, 1152, 1250 |
| NlaIV | GGNNCC | 2 cut(s) | 1182, 1236 |
| NmeAIII | GCCGAG | 1 cut(s) | 1277 |
| NmuCI | GTSAC | 4 cut(s) | 31, 152, 671, 1086 |
| NsiI | ATGCAT | 4 cut(s) | 166, 245, 646, 1071 |
| PagI | TCATGA | 1 cut(s) | 976 |
| PaqCI | CACCTGC | 1 cut(s) | 570 |
| PciSI | GCTCTTC | 1 cut(s) | 113 |
| PctI | GAATGC | 2 cut(s) | 299, 644 |
| PdmI | GAANNNNTTC | 3 cut(s) | 183, 306, 408 |
| PfeI | GAWTC | 6 cut(s) | 218, 469, 515, 982, 1025, 1142 |
| PkrI | GCNGC | 7 cut(s) | 328, 331, 696, 704, 872, 1318, 1330 |
| PleI | GAGTC | 2 cut(s) | 244, 668 |
| PmaCI | CACGTG | 1 cut(s) | 1282 |
| PmlI | CACGTG | 1 cut(s) | 1282 |
| PpsI | GAGTC | 2 cut(s) | 244, 668 |
| Ppu21I | YACGTR | 1 cut(s) | 1282 |
| Psp6I | CCWGG | 1 cut(s) | 970 |
| PspCI | CACGTG | 1 cut(s) | 1282 |
| PspGI | CCWGG | 1 cut(s) | 970 |
| PspN4I | GGNNCC | 2 cut(s) | 1182, 1236 |
| PstI | CTGCAG | 1 cut(s) | 699 |
| PstNI | CAGNNNCTG | 1 cut(s) | 538 |
| PsuI | RGATCY | 2 cut(s) | 587, 1166 |
| RsaI | GTAC | 4 cut(s) | 323, 389, 775, 1304 |
| RsaNI | GTAC | 4 cut(s) | 322, 388, 774, 1303 |
| SapI | GCTCTTC | 1 cut(s) | 113 |
| SaqAI | TTAA | 1 cut(s) | 476 |
| SatI | GCNGC | 7 cut(s) | 327, 330, 695, 703, 871, 1317, 1329 |
| Sau3AI | GATC | 6 cut(s) | 72, 133, 587, 892, 938, 1166 |
| SchI | GAGTC | 2 cut(s) | 244, 668 |
| ScrFI | CCNGG | 2 cut(s) | 781, 972 |
| SduI | GDGCHC | 3 cut(s) | 287, 1281, 1287 |
| SexAI | ACCWGGT | 1 cut(s) | 970 |
| SfaNI | GCATC | 8 cut(s) | 57, 230, 252, 569, 795, 1056, 1123, 1205 |
| SfcI | CTRYAG | 1 cut(s) | 695 |
| Sse9I | AATT | 7 cut(s) | 26, 315, 394, 497, 1097, 1227, 1323 |
| SsiI | CCGC | 5 cut(s) | 70, 101, 358, 791, 1329 |
| SspI | AATATT | 1 cut(s) | 752 |
| SspMI | CTAG | 3 cut(s) | 188, 900, 1005 |
| StyD4I | CCNGG | 2 cut(s) | 779, 970 |
| StyI | CCWWGG | 2 cut(s) | 525, 568 |
| TaaI | ACNGT | 1 cut(s) | 1086 |
| TaiI | ACGT | 2 cut(s) | 879, 1284 |
| TaqI | TCGA | 6 cut(s) | 75, 248, 402, 503, 879, 1321 |
| TasI | AATT | 7 cut(s) | 26, 315, 394, 497, 1097, 1227, 1323 |
| TatI | WGTACW | 1 cut(s) | 773 |
| TauI | GCSGC | 1 cut(s) | 1331 |
| TfiI | GAWTC | 6 cut(s) | 218, 469, 515, 982, 1025, 1142 |
| Tru1I | TTAA | 1 cut(s) | 476 |
| Tru9I | TTAA | 1 cut(s) | 476 |
| TscAI | CASTG | 2 cut(s) | 561, 712 |
| TseFI | GTSAC | 4 cut(s) | 31, 152, 671, 1086 |
| TseI | GCWGC | 6 cut(s) | 326, 329, 694, 702, 870, 1316 |
| Tsp45I | GTSAC | 4 cut(s) | 31, 152, 671, 1086 |
| TspDTI | ATGAA | 5 cut(s) | 479, 801, 1110, 1124, 1323 |
| TspGWI | ACGGA | 2 cut(s) | 405, 1173 |
| TspRI | CASTG | 2 cut(s) | 561, 712 |
| VneI | GTGCAC | 2 cut(s) | 1277, 1283 |
| XapI | RAATTY | 3 cut(s) | 26, 394, 497 |
| XmnI | GAANNNNTTC | 3 cut(s) | 183, 306, 408 |
| XspI | CTAG | 3 cut(s) | 188, 900, 1005 |
| Zsp2I | ATGCAT | 4 cut(s) | 166, 245, 646, 1071 |