Regulator of Vps4 activity in the MVB pathway
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G52315 AT1G52315 AT1G79910 AT1G79910 AT1G79910 |
| fragaria_vesca | FvH4_6g31290 FvH4_6g31290 |
| malus_domestica | MD09G1212300.v1.1 MD17G1194200.v1.1 |
| prunus_persica | Prupe.3G070200_v2.0.a1 Prupe.3G070200_v2.0.a1 Prupe.3G070200_v2.0.a1 Prupe.3G070200_v2.0.a1 Prupe.3G070200_v2.0.a1 |
| pyrus_communis | pycom09g12950 |
| rosa_chinensis | RchiOBHm_Chr2g0138021 RchiOBHm_Chr6g0262501 |
| rosa_laevigata | RLG00000014421 RLG00000019713 |
| rosa_multiflora | Rmu_sc0000596.1_g000009 Rmu_sc0006745.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00106570 Rroxscaffold_7G00205210 |
| rosa_rugosa | Rorug02G0349100 |
| rosa_samantha | Rh2AG115900 Rh2AG395800 Rh2BG410900 Rh2CG382300 Rh2DG417600 Rh6BG112900 Rh6CG111200 Rh6DG100900 |
| rosa_wichuraiana | Rw2G032320 Rw6G010270 Rw6G010710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 281 |
| AccB1I | GGYRCC | 1 cut(s) | 229 |
| AcsI | RAATTY | 1 cut(s) | 70 |
| AfaI | GTAC | 2 cut(s) | 177, 183 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 163 |
| AgsI | TTSAA | 2 cut(s) | 28, 91 |
| Alw21I | GWGCWC | 1 cut(s) | 81 |
| AoxI | GGCC | 2 cut(s) | 121, 146 |
| ApoI | RAATTY | 1 cut(s) | 70 |
| AseI | ATTAAT | 1 cut(s) | 132 |
| AsuHPI | GGTGA | 1 cut(s) | 52 |
| BaeGI | GKGCMC | 1 cut(s) | 234 |
| BanI | GGYRCC | 1 cut(s) | 229 |
| Bbv12I | GWGCWC | 1 cut(s) | 81 |
| BccI | CCATC | 1 cut(s) | 220 |
| BfaI | CTAG | 1 cut(s) | 263 |
| BmcAI | AGTACT | 1 cut(s) | 183 |
| BmiI | GGNNCC | 1 cut(s) | 231 |
| BpuEI | CTTGAG | 3 cut(s) | 65, 68, 98 |
| BsaJI | CCNNGG | 1 cut(s) | 234 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 231, 261 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 163 |
| BseDI | CCNNGG | 1 cut(s) | 234 |
| BseGI | GGATG | 2 cut(s) | 11, 231 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BseSI | GKGCMC | 1 cut(s) | 234 |
| BshFI | GGCC | 2 cut(s) | 123, 148 |
| BshNI | GGYRCC | 1 cut(s) | 229 |
| BsiHKAI | GWGCWC | 1 cut(s) | 81 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BsnI | GGCC | 2 cut(s) | 123, 148 |
| Bsp1286I | GDGCHC | 2 cut(s) | 81, 234 |
| Bsp143I | GATC | 1 cut(s) | 106 |
| BspANI | GGCC | 2 cut(s) | 123, 148 |
| BspLI | GGNNCC | 1 cut(s) | 231 |
| BspT107I | GGYRCC | 1 cut(s) | 229 |
| BssECI | CCNNGG | 1 cut(s) | 234 |
| BssMI | GATC | 1 cut(s) | 106 |
| BssT1I | CCWWGG | 1 cut(s) | 234 |
| Bst6I | CTCTTC | 1 cut(s) | 59 |
| BstDEI | CTNAG | 1 cut(s) | 57 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 161 |
| BstF5I | GGATG | 2 cut(s) | 11, 231 |
| BstKTI | GATC | 1 cut(s) | 109 |
| BstMBI | GATC | 1 cut(s) | 106 |
| BstSLI | GKGCMC | 1 cut(s) | 234 |
| BsuRI | GGCC | 2 cut(s) | 123, 148 |
| BtsCI | GGATG | 2 cut(s) | 11, 231 |
| Csp6I | GTAC | 2 cut(s) | 176, 182 |
| CviAII | CATG | 2 cut(s) | 34, 191 |
| CviJI | RGCY | 6 cut(s) | 46, 123, 148, 154, 200, 262 |
| CviKI_1 | RGCY | 6 cut(s) | 46, 123, 148, 154, 200, 262 |
| CviQI | GTAC | 2 cut(s) | 176, 182 |
| DdeI | CTNAG | 1 cut(s) | 57 |
| DpnI | GATC | 1 cut(s) | 108 |
| DpnII | GATC | 1 cut(s) | 106 |
| Eam1104I | CTCTTC | 1 cut(s) | 59 |
| EarI | CTCTTC | 1 cut(s) | 59 |
| Eco130I | CCWWGG | 1 cut(s) | 234 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 161 |
| EcoRI | GAATTC | 1 cut(s) | 70 |
| EcoT14I | CCWWGG | 1 cut(s) | 234 |
| EcoT22I | ATGCAT | 2 cut(s) | 139, 192 |
| ErhI | CCWWGG | 1 cut(s) | 234 |
| FaeI | CATG | 2 cut(s) | 37, 194 |
| FaiI | YATR | 9 cut(s) | 35, 139, 141, 170, 192, 197, 245, 270, 281 |
| FatI | CATG | 2 cut(s) | 33, 190 |
| FauNDI | CATATG | 1 cut(s) | 139 |
| FokI | GGATG | 2 cut(s) | 18, 238 |
| FspBI | CTAG | 1 cut(s) | 263 |
| HaeIII | GGCC | 2 cut(s) | 123, 148 |
| Hin1II | CATG | 2 cut(s) | 37, 194 |
| HinfI | GANTC | 1 cut(s) | 272 |
| HphI | GGTGA | 1 cut(s) | 52 |
| Hpy188I | TCNGA | 2 cut(s) | 22, 296 |
| Hpy188III | TCNNGA | 1 cut(s) | 115 |
| HpyAV | CCTTC | 4 cut(s) | 22, 31, 138, 166 |
| HpyCH4V | TGCA | 3 cut(s) | 9, 137, 190 |
| HpyF3I | CTNAG | 1 cut(s) | 57 |
| Hsp92II | CATG | 2 cut(s) | 37, 194 |
| Kzo9I | GATC | 1 cut(s) | 106 |
| LpnPI | CCDG | 1 cut(s) | 214 |
| MaeI | CTAG | 1 cut(s) | 263 |
| MalI | GATC | 1 cut(s) | 108 |
| MboI | GATC | 1 cut(s) | 106 |
| MboII | GAAGA | 4 cut(s) | 73, 76, 101, 103 |
| MhlI | GDGCHC | 2 cut(s) | 81, 234 |
| MluCI | AATT | 2 cut(s) | 70, 276 |
| MlyI | GAGTC | 1 cut(s) | 266 |
| MnlI | CCTC | 3 cut(s) | 36, 43, 60 |
| Mph1103I | ATGCAT | 2 cut(s) | 139, 192 |
| MseI | TTAA | 1 cut(s) | 132 |
| MslI | CAYNNNNRTG | 1 cut(s) | 38 |
| NdeI | CATATG | 1 cut(s) | 139 |
| NdeII | GATC | 1 cut(s) | 106 |
| NlaIII | CATG | 2 cut(s) | 37, 194 |
| NlaIV | GGNNCC | 1 cut(s) | 231 |
| NsiI | ATGCAT | 2 cut(s) | 139, 192 |
| PleI | GAGTC | 1 cut(s) | 266 |
| PpsI | GAGTC | 1 cut(s) | 266 |
| PshBI | ATTAAT | 1 cut(s) | 132 |
| PsiI | TTATAA | 1 cut(s) | 281 |
| PspN4I | GGNNCC | 1 cut(s) | 231 |
| RsaI | GTAC | 2 cut(s) | 177, 183 |
| RsaNI | GTAC | 2 cut(s) | 176, 182 |
| RseI | CAYNNNNRTG | 1 cut(s) | 38 |
| SaqAI | TTAA | 1 cut(s) | 132 |
| Sau3AI | GATC | 1 cut(s) | 106 |
| ScaI | AGTACT | 1 cut(s) | 183 |
| SchI | GAGTC | 1 cut(s) | 266 |
| SduI | GDGCHC | 2 cut(s) | 81, 234 |
| SetI | ASST | 2 cut(s) | 42, 177 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 38 |
| SmlI | CTYRAG | 3 cut(s) | 47, 80, 113 |
| SmoI | CTYRAG | 3 cut(s) | 47, 80, 113 |
| Sse9I | AATT | 2 cut(s) | 70, 276 |
| SspMI | CTAG | 1 cut(s) | 263 |
| StyI | CCWWGG | 1 cut(s) | 234 |
| TaqI | TCGA | 1 cut(s) | 216 |
| TasI | AATT | 2 cut(s) | 70, 276 |
| TatI | WGTACW | 1 cut(s) | 181 |
| Tru1I | TTAA | 1 cut(s) | 132 |
| Tru9I | TTAA | 1 cut(s) | 132 |
| TspDTI | ATGAA | 2 cut(s) | 50, 185 |
| VspI | ATTAAT | 1 cut(s) | 132 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 161 |
| XapI | RAATTY | 1 cut(s) | 70 |
| XspI | CTAG | 1 cut(s) | 263 |
| ZrmI | AGTACT | 1 cut(s) | 183 |
| Zsp2I | ATGCAT | 2 cut(s) | 139, 192 |