Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0003249

Physical Location & Seq

Genomic Coordinates Forward (+)

19943856 .. 19948263

Gene Structure 4408 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGACTAAATCTCAGTTAGTTAAGAGCTTTCGTTGGGCCGTTTTGCTGAGGCCTAGGGCTTTTGGGTTTGTGGCTGTTCGAGTTGAGCGAGTACAGTCGCAGCTAGGGTTTAACAAGCAACGCCCAAACCCTACTGAAATCTCCACAGTTTCTCAACGTCTCTGTGCTGCGAGAGAAAGCTCGTTTTCTTCCTCTGCGCCCCCTGAAACTGTGAAACCCCAATTCAAACCCATATTCCTTGGAGAACTAGTCGGAATGACAGACCCAAACCTTCACGCGCCTTCGGAGGACGAGACGAAGAAGAAGAAGCGCAAGAGAAACAGAGCAAAGAAACCGTCGGAATTGGCGGGTGTAGAACAACAAGAATATCTGGAGCCTCAAAACCCTGACGGCGAACCGGCTAAGGGCGAGAGTGAGAAGAAGAGGAAGAAGGTGAATAAATTGAAGGGAGAGGAAGTAGAGGATCAAAGCCCCGTCGAGGACAAAGATGAAGAAGATGAGGAGAGGGAAGAAGCAATGGAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAATAGTGGCGGTGGAGGGACTGGGATTATGACCACAGAGTCGTTTGCTTCGTTGAACTTGTCTGAGAACACTTACAAGGCCATTGAAGAAATGAAGTTTCAGTATATGACTCAGATTCAAGCTAGAGCAATCCCACCGCTCTTGATTGGAAAAGATGTCCTCGGAGCTGCAAGGACAGGGTCCGGTAAAACTCTTGCTTTTCTAATACCAGCTGTGGAGCTGCTATATAACACACATTTTGCTCCTCGTAACGGAATGGGTGTTGTTGTGATTTGCCCAACACGGGAACTCGCAATACAGACTCATGCTGTGGCAAAGGACCTTCTAAAGTATCACTCTCAGACTCTTGGCTTGGTTATTGGAGGTTCAGCTAGGAGAGGGGAAGCAGAACGTATTGTAAAAGGAGTAAATTTATTGGTTGCAACCCCTGGTCGACTTCTTGACCATCTCCAGAATACCAAGGGATTCATATATAAGAACTTGAAGTGCCTTGTGATTGATGAAGCTGACAGGTTATTGGAAGCAAACTTTGAGGAGGAAATGAAACAGATTGTCAAGATTCTGCCAAAGGATAGGCAAACAGCTTTATTTTCAGCAACCCAAACTAAGAAGGTTGAAGATCTTGTTAAGTTGTCATTTCGAAAAGATCAGAAACCTATCTTTGTTGATGTGGATGAGGGGAGGTCAAAGGTCACCAATGAAGGGCTGGAACAAGGCTATTGTGTTGTCCCAAGTGCTAAGAGATTTCTTCTCTTATATTCTTTCCTGACAAAGAATACGTCTAAGAAAGTTATGGTCTTCTTCTCGTCTTGTAACTCAGTGAAATTCCACTCCGAACTTCTTAGATACATTAATGTGGAATGCTTTGATATCCATGGAAAGCAAAAGCAGCAGAAGAGGACAACTACTTTTTTTGACTTCTGTAAAGCAGAGAAAGGAATCTTACTCTGTACTGATGTTGCTGCTCGTGGACTGGATATTCCTGCTGTGGACTGGATTTTGCAGTTTGATCCTCCAGATGAACCGACGGAATATATCCATAGGGTTGGTCGAACAGCTCGAGGGGAAGGTGCAACAGGAAAGGCATTACTTTTCCTCATTCCCGAAGAGTTGCAATTCATTCGCTATTTGAAGGCTGCAAATGTGCCCGTTAAACCATACGATTTTAATGAAAAGAAGCTGAAGAATGTGCAGTCAAAACTGGAGCAGATGGTTCAAAAGAATCACTACCTGAATAATTCAGCAAAAGAGGCGTATACATCTTATTTATTAGCATACAATTCACACTCTATGAAGGACATCTTTAATGTACACCGGCCTTTTCATCTAAACGCGGTTGCGGCTTCCTTTTGTTTTTCTAATCCACCCAAGGTGCATTTGAACTTAGACAGCAGTAAATCAAAGTTCAGGAAGAAGACGCGCAAAGAAGGAAGTCGAAATGGATTCAGTGAGAGCAATCCTTATGGCAATCGAAAAGGCGGAGATGATAGACAATTCGTAAGGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

693

Amino Acids

78.33

Weight (kDa)

9.37

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	227 - 398	2.4e-47	DEAD/DEAH box helicase
Helicase_C	PF00271	441 - 544	8.6e-25	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	598 - 648	8.2e-14	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18600
fragaria_vesca	FvH4_5g12870
malus_domestica	MD05G1177700.v1.1 MD06G1209500.v1.1 MD14G1220200.v1.1 MD15G1015500.v1.1
prunus_persica	Prupe.5G214700_v2.0.a1 Prupe.6G096100_v2.0.a1 Prupe.6G096400_v2.0.a1 Prupe.6G096400_v2.0.a1 Prupe.6G097300_v2.0.a1
pyrus_communis	pycom05g16360 pycom05g16400 pycom05g16410 pycom06g18710 pycom14g18230 pycom15g01320
rosa_chinensis	RchiOBHm_Chr5g0083351 RchiOBHm_Chr5g0083361 RchiOBHm_Chr7g0184361
rosa_laevigata	RLG00000004982 RLG00000037030
rosa_multiflora	Rmu_sc0001444.1_g000013 Rmu_sc0001557.1_g000022 Rmu_sc0002245.1_g000045
rosa_roxburghii	Rroxscaffold_1G00001130 Rroxscaffold_3G00269690
rosa_samantha	Rh5AG533800 Rh5BG561600 Rh5CG583900 Rh5CG584000 Rh7AG080700 Rh7BG066500 Rh7CG066800 Rh7DG066500
rosa_wichuraiana	Rw5G049900 Rw7G005460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	607
AccBSI	CCGCTC	1 cut(s)	709
AccI	GTMKAC	2 cut(s)	1003, 1826
AccII	CGCG	3 cut(s)	278, 1904, 1990
AciI	CCGC	6 cut(s)	347, 579, 707, 1904, 1910, 2049
AclWI	GGATC	2 cut(s)	471, 1574
AcsI	RAATTY	2 cut(s)	979, 1394
AcuI	CTGAAG	1 cut(s)	1772
AfaI	GTAC	3 cut(s)	93, 1522, 1881
AfiI	CCNNNNNNNGG	5 cut(s)	404, 478, 821, 853, 1272
AhlI	ACTAGT	1 cut(s)	247
AjnI	CCWGG	1 cut(s)	997
Alw26I	GTCTC	2 cut(s)	164, 287
AlwI	GGATC	2 cut(s)	471, 1574
Ama87I	CYCGRG	1 cut(s)	1629
AoxI	GGCC	4 cut(s)	36, 50, 648, 1886
ApeKI	GCWGC	7 cut(s)	100, 167, 737, 790, 1459, 1532, 1706
ApoI	RAATTY	2 cut(s)	979, 1394
ArsI	GACNNNNNNTTYG	4 cut(s)	320, 352, 1334, 1366
AseI	ATTAAT	1 cut(s)	1422
AspA2I	CCTAGG	1 cut(s)	53
AspLEI	GCGC	4 cut(s)	199, 280, 312, 1992
AspS9I	GGNCC	3 cut(s)	36, 750, 889
AsuHPI	GGTGA	3 cut(s)	445, 580, 1255
AsuII	TTCGAA	1 cut(s)	1210
AvaI	CYCGRG	1 cut(s)	1629
AvaII	GGWCC	2 cut(s)	750, 889
AvrII	CCTAGG	1 cut(s)	53
BaeGI	GKGCMC	1 cut(s)	1719
BauI	CACGAG	1 cut(s)	1536
BbsI	GAAGAC	2 cut(s)	1360, 1991
BbvCI	CCTCAGC	1 cut(s)	47
BbvI	GCAGC	7 cut(s)	112, 154, 724, 777, 1471, 1519, 1693
BccI	CCATC	2 cut(s)	1023, 1774
BceAI	ACGGC	2 cut(s)	23, 406
BcgI	CGANNNNNNTGC	2 cut(s)	1673, 1707
BciT130I	CCWGG	1 cut(s)	999
BcoDI	GTCTC	2 cut(s)	164, 287
BcuI	ACTAGT	1 cut(s)	247
BfaI	CTAG	5 cut(s)	54, 104, 248, 693, 942
BglII	AGATCT	1 cut(s)	1189
BisI	GCNGC	8 cut(s)	101, 168, 738, 791, 1460, 1533, 1707, 1911
BlnI	CCTAGG	1 cut(s)	53
BlsI	GCNGC	8 cut(s)	102, 169, 739, 792, 1461, 1534, 1708, 1912
Bme1390I	CCNGG	1 cut(s)	999
Bme18I	GGWCC	2 cut(s)	750, 889
BmeT110I	CYCGRG	1 cut(s)	1629
BmgT120I	GGNCC	3 cut(s)	36, 750, 889
BmiI	GGNNCC	2 cut(s)	375, 751
BmrFI	CCNGG	1 cut(s)	999
BmrI	ACTGGG	1 cut(s)	600
BmuI	ACTGGG	1 cut(s)	600
BpiI	GAAGAC	2 cut(s)	1360, 1991
BpmI	CTGGAG	4 cut(s)	392, 1004, 1569, 1793
Bpu10I	CCTNAGC	2 cut(s)	47, 402
Bpu14I	TTCGAA	1 cut(s)	1210
BsaJI	CCNNGG	7 cut(s)	53, 238, 730, 997, 1029, 1444, 1938
BsaWI	WCCGGW	1 cut(s)	752
BsaXI	ACNNNNNCTCC	4 cut(s)	234, 264, 441, 471
Bsc4I	CCNNNNNNNGG	5 cut(s)	404, 478, 821, 853, 1272
Bse118I	RCCGGY	2 cut(s)	397, 1884
Bse1I	ACTGG	4 cut(s)	595, 1548, 1568, 1776
Bse3DI	GCAATG	1 cut(s)	522
BseBI	CCWGG	1 cut(s)	999
BseDI	CCNNGG	7 cut(s)	53, 238, 730, 997, 1029, 1444, 1938
BseGI	GGATG	1 cut(s)	1249
BseLI	CCNNNNNNNGG	5 cut(s)	404, 478, 821, 853, 1272
BseMI	GCAATG	1 cut(s)	522
BseMII	CTCAG	6 cut(s)	26, 38, 624, 695, 923, 1401
BseNI	ACTGG	4 cut(s)	595, 1548, 1568, 1776
BseRI	GAGGAG	9 cut(s)	515, 536, 539, 542, 545, 548, 551, 804, 1118
BseSI	GKGCMC	1 cut(s)	1719
BseXI	GCAGC	7 cut(s)	112, 154, 724, 777, 1471, 1519, 1693
BsgI	GTGCAG	1 cut(s)	1781
Bsh1236I	CGCG	3 cut(s)	278, 1904, 1990
BshFI	GGCC	4 cut(s)	38, 52, 650, 1888
BsiHKCI	CYCGRG	1 cut(s)	1629
BsiSI	CCGG	3 cut(s)	398, 753, 1885
BslFI	GGGAC	2 cut(s)	601, 1283
BslI	CCNNNNNNNGG	5 cut(s)	404, 478, 821, 853, 1272
BsmAI	GTCTC	2 cut(s)	164, 287
BsmBI	CGTCTC	2 cut(s)	164, 287
BsmFI	GGGAC	2 cut(s)	601, 1283
BsmI	GAATGC	1 cut(s)	1436
BsnI	GGCC	4 cut(s)	38, 52, 650, 1888
BsoBI	CYCGRG	1 cut(s)	1629
Bsp119I	TTCGAA	1 cut(s)	1210
Bsp1286I	GDGCHC	1 cut(s)	1719
Bsp1407I	TGTACA	1 cut(s)	1879
Bsp143I	GATC	4 cut(s)	463, 1189, 1216, 1579
Bsp19I	CCATGG	1 cut(s)	1444
BspACI	CCGC	6 cut(s)	347, 579, 707, 1904, 1910, 2049
BspANI	GGCC	4 cut(s)	38, 52, 650, 1888
BspCNI	CTCAG	6 cut(s)	25, 39, 625, 694, 922, 1400
BspFNI	CGCG	3 cut(s)	278, 1904, 1990
BspLI	GGNNCC	2 cut(s)	375, 751
BspPI	GGATC	2 cut(s)	471, 1574
BspT104I	TTCGAA	1 cut(s)	1210
BsrBI	CCGCTC	1 cut(s)	709
BsrDI	GCAATG	1 cut(s)	522
BsrFI	RCCGGY	2 cut(s)	397, 1884
BsrGI	TGTACA	1 cut(s)	1879
BsrI	ACTGG	4 cut(s)	595, 1548, 1568, 1776
BssAI	RCCGGY	2 cut(s)	397, 1884
BssECI	CCNNGG	7 cut(s)	53, 238, 730, 997, 1029, 1444, 1938
BssMI	GATC	4 cut(s)	463, 1189, 1216, 1579
BssNAI	GTATAC	1 cut(s)	1827
BssSI	CACGAG	1 cut(s)	1536
BssT1I	CCWWGG	5 cut(s)	53, 238, 1029, 1444, 1938
Bst1107I	GTATAC	1 cut(s)	1827
Bst2BI	CACGAG	1 cut(s)	1536
Bst2UI	CCWGG	1 cut(s)	999
Bst4CI	ACNGT	4 cut(s)	96, 148, 211, 336
Bst6I	CTCTTC	3 cut(s)	416, 1460, 1671
BstAUI	TGTACA	1 cut(s)	1879
BstBI	TTCGAA	1 cut(s)	1210
BstDSI	CCRYGG	1 cut(s)	1444
BstEII	GGTNACC	1 cut(s)	1261
BstF5I	GGATG	1 cut(s)	1249
BstFNI	CGCG	3 cut(s)	278, 1904, 1990
BstHHI	GCGC	4 cut(s)	199, 280, 312, 1992
BstKTI	GATC	4 cut(s)	466, 1192, 1219, 1582
BstMAI	GTCTC	2 cut(s)	164, 287
BstMBI	GATC	4 cut(s)	463, 1189, 1216, 1579
BstMWI	GCNNNNNNNGC	3 cut(s)	1459, 1820, 1910
BstNI	CCWGG	1 cut(s)	999
BstPI	GGTNACC	1 cut(s)	1261
BstSCI	CCNGG	1 cut(s)	997
BstSLI	GKGCMC	1 cut(s)	1719
BstUI	CGCG	3 cut(s)	278, 1904, 1990
BstV1I	GCAGC	7 cut(s)	112, 154, 724, 777, 1471, 1519, 1693
BstV2I	GAAGAC	2 cut(s)	1360, 1991
BstX2I	RGATCY	1 cut(s)	1189
BstXI	CCANNNNNNTGG	1 cut(s)	1616
BstYI	RGATCY	1 cut(s)	1189
BstZ17I	GTATAC	1 cut(s)	1827
BsuRI	GGCC	4 cut(s)	38, 52, 650, 1888
BtgI	CCRYGG	1 cut(s)	1444
BtsCI	GGATG	1 cut(s)	1249
BtsIMutI	CAGTG	2 cut(s)	1395, 2023
CfoI	GCGC	4 cut(s)	199, 280, 312, 1992
Cfr10I	RCCGGY	2 cut(s)	397, 1884
Cfr13I	GGNCC	3 cut(s)	36, 750, 889
CseI	GACGC	1 cut(s)	1996
Csp6I	GTAC	3 cut(s)	92, 1521, 1880
CspCI	CAANNNNNGTGG	2 cut(s)	693, 728
CviAII	CATG	2 cut(s)	875, 1445
CviQI	GTAC	3 cut(s)	92, 1521, 1880
DpnI	GATC	4 cut(s)	465, 1191, 1218, 1581
DpnII	GATC	4 cut(s)	463, 1189, 1216, 1579
DrdI	GACNNNNNNGTC	1 cut(s)	607
DseDI	GACNNNNNNGTC	1 cut(s)	607
Eam1104I	CTCTTC	3 cut(s)	416, 1460, 1671
EarI	CTCTTC	3 cut(s)	416, 1460, 1671
EciI	GGCGGA	1 cut(s)	2064
Eco130I	CCWWGG	5 cut(s)	53, 238, 1029, 1444, 1938
Eco147I	AGGCCT	1 cut(s)	52
Eco32I	GATATC	1 cut(s)	1441
Eco47I	GGWCC	2 cut(s)	750, 889
Eco57I	CTGAAG	1 cut(s)	1772
Eco88I	CYCGRG	1 cut(s)	1629
Eco91I	GGTNACC	1 cut(s)	1261
EcoO109I	RGGNCCY	1 cut(s)	889
EcoO65I	GGTNACC	1 cut(s)	1261
EcoRII	CCWGG	1 cut(s)	997
EcoRV	GATATC	1 cut(s)	1441
EcoT14I	CCWWGG	5 cut(s)	53, 238, 1029, 1444, 1938
ErhI	CCWWGG	5 cut(s)	53, 238, 1029, 1444, 1938
Esp3I	CGTCTC	2 cut(s)	164, 287
FaeI	CATG	2 cut(s)	878, 1448
FalI	AAGNNNNNCTT	2 cut(s)	1856, 1888
FaqI	GGGAC	2 cut(s)	601, 1283
FatI	CATG	2 cut(s)	874, 1444
FauI	CCCGC	1 cut(s)	340
FblI	GTMKAC	2 cut(s)	1003, 1826
Fnu4HI	GCNGC	8 cut(s)	101, 168, 738, 791, 1460, 1533, 1707, 1911
FokI	GGATG	1 cut(s)	1256
Fsp4HI	GCNGC	8 cut(s)	101, 168, 738, 791, 1460, 1533, 1707, 1911
FspBI	CTAG	5 cut(s)	54, 104, 248, 693, 942
GlaI	GCGC	4 cut(s)	198, 279, 311, 1991
GluI	GCNGC	8 cut(s)	101, 168, 738, 791, 1460, 1533, 1707, 1911
GsuI	CTGGAG	4 cut(s)	392, 1004, 1569, 1793
HaeIII	GGCC	4 cut(s)	38, 52, 650, 1888
HapII	CCGG	3 cut(s)	398, 753, 1885
HgaI	GACGC	1 cut(s)	1996
HhaI	GCGC	4 cut(s)	199, 280, 312, 1992
Hin1II	CATG	2 cut(s)	878, 1448
Hin6I	GCGC	4 cut(s)	197, 278, 310, 1990
HinP1I	GCGC	4 cut(s)	197, 278, 310, 1990
HincII	GTYRAC	1 cut(s)	1004
HindII	GTYRAC	1 cut(s)	1004
HpaII	CCGG	3 cut(s)	398, 753, 1885
HphI	GGTGA	3 cut(s)	445, 580, 1255
Hpy166II	GTNNAC	5 cut(s)	1004, 1541, 1561, 1827, 1882
Hpy188I	TCNGA	9 cut(s)	254, 286, 340, 634, 684, 734, 912, 1221, 1405
Hpy188III	TCNNGA	9 cut(s)	371, 712, 1010, 1021, 1126, 1336, 1586, 1673, 1978
Hpy8I	GTNNAC	5 cut(s)	1004, 1541, 1561, 1827, 1882
Hpy99I	CGWCG	3 cut(s)	340, 479, 1600
HpyCH4III	ACNGT	4 cut(s)	96, 148, 211, 336
HpyCH4IV	ACGT	3 cut(s)	157, 961, 1349
HpyCH4V	TGCA	8 cut(s)	740, 992, 1573, 1643, 1684, 1709, 1762, 1945
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1459, 1820, 1910
HpySE526I	ACGT	3 cut(s)	157, 961, 1349
Hsp92II	CATG	2 cut(s)	878, 1448
HspAI	GCGC	4 cut(s)	197, 278, 310, 1990
Kzo9I	GATC	4 cut(s)	463, 1189, 1216, 1579
LmnI	GCTCC	5 cut(s)	373, 734, 787, 817, 1774
Lsp1109I	GCAGC	7 cut(s)	112, 154, 724, 777, 1471, 1519, 1693
MaeI	CTAG	5 cut(s)	54, 104, 248, 693, 942
MaeII	ACGT	3 cut(s)	157, 961, 1349
MaeIII	GTNAC	3 cut(s)	818, 1261, 1382
MalI	GATC	4 cut(s)	465, 1191, 1218, 1581
MbiI	CCGCTC	1 cut(s)	709
MboI	GATC	4 cut(s)	463, 1189, 1216, 1579
MflI	RGATCY	1 cut(s)	1189
MhlI	GDGCHC	1 cut(s)	1719
MluCI	AATT	9 cut(s)	221, 341, 440, 979, 1394, 1685, 1807, 1849, 2063
MlyI	GAGTC	4 cut(s)	617, 673, 865, 907
MmeI	TCCRAC	2 cut(s)	232, 318
MseI	TTAA	7 cut(s)	21, 111, 1197, 1422, 1722, 1737, 1875
MslI	CAYNNNNRTG	1 cut(s)	1424
MspA1I	CMGCKG	1 cut(s)	782
MspI	CCGG	3 cut(s)	398, 753, 1885
MspR9I	CCNGG	1 cut(s)	999
Mva1269I	GAATGC	1 cut(s)	1436
MvaI	CCWGG	1 cut(s)	999
MvnI	CGCG	3 cut(s)	278, 1904, 1990
MwoI	GCNNNNNNNGC	3 cut(s)	1459, 1820, 1910
NcoI	CCATGG	1 cut(s)	1444
NdeII	GATC	4 cut(s)	463, 1189, 1216, 1579
NlaIII	CATG	2 cut(s)	878, 1448
NlaIV	GGNNCC	2 cut(s)	375, 751
NmuCI	GTSAC	1 cut(s)	1261
NspV	TTCGAA	1 cut(s)	1210
PaeR7I	CTCGAG	1 cut(s)	1629
PceI	AGGCCT	1 cut(s)	52
PcsI	WCGNNNNNNNCGW	3 cut(s)	85, 617, 1627
PctI	GAATGC	1 cut(s)	1436
PfeI	GAWTC	6 cut(s)	685, 1035, 1129, 1509, 1792, 2013
PflFI	GACNNNGTC	1 cut(s)	748
PkrI	GCNGC	8 cut(s)	102, 169, 739, 792, 1461, 1534, 1708, 1912
PleI	GAGTC	4 cut(s)	616, 673, 865, 907
PpsI	GAGTC	4 cut(s)	616, 673, 865, 907
PpuMI	RGGWCCY	1 cut(s)	889
PshBI	ATTAAT	1 cut(s)	1422
Psp5II	RGGWCCY	1 cut(s)	889
Psp6I	CCWGG	1 cut(s)	997
PspEI	GGTNACC	1 cut(s)	1261
PspGI	CCWGG	1 cut(s)	997
PspN4I	GGNNCC	2 cut(s)	375, 751
PspPI	GGNCC	3 cut(s)	36, 750, 889
PspPPI	RGGWCCY	1 cut(s)	889
PspXI	VCTCGAGB	1 cut(s)	1629
PsrI	GAACNNNNNNTAC	2 cut(s)	849, 881
PsuI	RGATCY	1 cut(s)	1189
PsyI	GACNNNGTC	1 cut(s)	748
PvuII	CAGCTG	1 cut(s)	782
RsaI	GTAC	3 cut(s)	93, 1522, 1881
RsaNI	GTAC	3 cut(s)	92, 1521, 1880
RseI	CAYNNNNRTG	1 cut(s)	1424
SalI	GTCGAC	1 cut(s)	1002
SaqAI	TTAA	7 cut(s)	21, 111, 1197, 1422, 1722, 1737, 1875
SatI	GCNGC	8 cut(s)	101, 168, 738, 791, 1460, 1533, 1707, 1911
Sau3AI	GATC	4 cut(s)	463, 1189, 1216, 1579
Sau96I	GGNCC	3 cut(s)	36, 750, 889
SchI	GAGTC	4 cut(s)	617, 673, 865, 907
ScrFI	CCNGG	1 cut(s)	999
SduI	GDGCHC	1 cut(s)	1719
Sfr274I	CTCGAG	1 cut(s)	1629
SfuI	TTCGAA	1 cut(s)	1210
SinI	GGWCC	2 cut(s)	750, 889
SlaI	CTCGAG	1 cut(s)	1629
SmiMI	CAYNNNNRTG	1 cut(s)	1424
SmlI	CTYRAG	1 cut(s)	1629
SmoI	CTYRAG	1 cut(s)	1629
SpeI	ACTAGT	1 cut(s)	247
Sse9I	AATT	9 cut(s)	221, 341, 440, 979, 1394, 1685, 1807, 1849, 2063
SseBI	AGGCCT	1 cut(s)	52
SsiI	CCGC	6 cut(s)	347, 579, 707, 1904, 1910, 2049
SspMI	CTAG	5 cut(s)	54, 104, 248, 693, 942
StuI	AGGCCT	1 cut(s)	52
StyD4I	CCNGG	1 cut(s)	997
StyI	CCWWGG	5 cut(s)	53, 238, 1029, 1444, 1938
TaaI	ACNGT	4 cut(s)	96, 148, 211, 336
TaiI	ACGT	3 cut(s)	160, 964, 1352
TaqI	TCGA	8 cut(s)	79, 477, 1003, 1210, 1621, 1630, 2005, 2041
TasI	AATT	9 cut(s)	221, 341, 440, 979, 1394, 1685, 1807, 1849, 2063
TatI	WGTACW	3 cut(s)	91, 1520, 1879
TauI	GCSGC	1 cut(s)	1913
TfiI	GAWTC	6 cut(s)	685, 1035, 1129, 1509, 1792, 2013
Tru1I	TTAA	7 cut(s)	21, 111, 1197, 1422, 1722, 1737, 1875
Tru9I	TTAA	7 cut(s)	21, 111, 1197, 1422, 1722, 1737, 1875
TscAI	CASTG	2 cut(s)	1395, 2023
TseFI	GTSAC	1 cut(s)	1261
TseI	GCWGC	7 cut(s)	100, 167, 737, 790, 1459, 1532, 1706
Tsp45I	GTSAC	1 cut(s)	1261
TspGWI	ACGGA	2 cut(s)	837, 1613
TspRI	CASTG	2 cut(s)	1395, 2023
Tth111I	GACNNNGTC	1 cut(s)	748
VpaK11BI	GGWCC	2 cut(s)	750, 889
VspI	ATTAAT	1 cut(s)	1422
XapI	RAATTY	2 cut(s)	979, 1394
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1273
XhoI	CTCGAG	1 cut(s)	1629
XmaJI	CCTAGG	1 cut(s)	53
XmiI	GTMKAC	2 cut(s)	1003, 1826
XspI	CTAG	5 cut(s)	54, 104, 248, 693, 942

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.