pycom15g34350

component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
33998810 .. 34002746
3937 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2781 bp
ATGGCATCTCGATTCTGGACTCAGCCTGGTAGCGATTCTGAGGATGAGGAAAGTGACTTTGAAGAGGAGGTTGAACCTACGGGTGGTGAGACTACCACTGAACCCGGCCTAAACCCTTACCTTCAGGCTAATGCAAGTGATAGCGAAGATTCTGATGACCAAAAGCGCGTCGTTAGATCGGCGAAAGATAAGCGCTTTGATGAATTGTCTGCGACTGTACACCAAATGAAGAATGCGATGAATATCAATGACTGGGTTAGCTTGCAAGAGAGCTTTGACAAGATAAATAAGCAGCTTGAGAAGGTCATGCGTGTTACCGAGGCTGTAAAAGTACCTACTCTCTACATAAAAGCTCTTGTATTGTTAGAAGACTTTCTGGCTCAGGCTTTGGCAAACAAGGATGCTAAGAAGAAGATGAGTAGTAGCAATGCCAAGGCCTTGAACTCAATGAAACAGAAACTGAAGAAGAACAATAAGCAATACGAGGACTTAATTAATAAATATAGGGAGAATCCTGAGCAGAGTGAAGATGATAAGCCTCCAGAAGAGGAAACGGATGATGACGATGATTCTGAAATTGAGGATCCTACTGATATTGCATTGTCAGGTAGCGAAGAACCAGAGGAGGAAGAAGAAGAAGAGGAAGAACCAACTGAAGCTGGTTGGCAGAAGAAGATGAGTAAGAAAGATAAGCTCATGGATAAGCAATTCAGTAAGGACCCTAGTGAAATCACGTGGGATACTGTTAACAAGAAATTTAAAGAGGTTGTGGCTGCTCGGGGCAGGAAGGGAACTGGAAGGTTTGAGCAGGTTGAGCAGCTTACCTTCTTGACAAAGGTTGCTAAGACCCCTGCACAGAAGCTGGAGATATTTTTCAGTGTTGTTTCTGCTCAGTTTGATGTGAATCCTGGTCTCAACGGGCACATGCCTATAAATGTGTGGAAGAAGTGTGTGCAGAATATGCACGTTATACTTGATATTCTTGTGAAGTATCCTAATATTACGGTGGATGACATGGTAGAGCCTGATGAGAATGAATCCCAGAAGGGACCAGATTATGATGGGACAATTAGGGTTTGGGGAAACTTGGTGGCCTTCTTGGAAAGGATAGATACTGAGTTCTTCAAGAGCTTGCAATGCATTGATCCCCACACTCGTGAGTACATTGAAAGACTCAGGGATGAGCCTATGTTTTTGGTTCTAGCTCAAAATGTTCAAGAGTATTTAGAACGGGTTGGAAATTACAAAGCTGCTGCTAAGGTAGCCCTAAGGCGGGTCGAACTTATCTATTATAAGCCACAAGAAGTTTATGATGCCATGCGAAAATTGGCAGAGCATACAGGAGAGAGTGACAATGGTGAAGAGCCTCGAGCAGCTGAGGAAAGTCGTGGTCCATCTTCATTTATTGTTGTTCCCGAGCTCGTTCCTCGAAAACCCACCTTCTCTGAGAGTAGCAGGACTATGATGGATATATTGGTTTCCCTCATATACAAGTATGGAGATGAGAGGACTAAAGCTCGTGCAATGCTTTGTGATATTTATCACCATGCTCTGCTGGATGAGTTTTCCACTTCCCGCGACTTGCTGCTTATGAGTCACCTGCAAGATAATGTTCAGCAGATGGACATTTCGACCCAGATACTTTATAACAGGGCCATGGCACAACTTGGTCTGTGTGCATTTCGTAATGGATTAATTACTGAAGCGCATAGCTGCCTTTCTGAACTATATTCTGGTGGAAGAGTAAAAGAGTTGCTTGCCCAAGGTGTATCACAAAGTAGATATCACGAGAAAACTCCAGAACAGGAAAGGCTGGAGAGGAGACGACAAATGCCTTACCATATGCATATCAACCCTGAGCTCCTGGAGGCAGTGCATTTGATATGTGCTATGCTGCTGGAAGTGCCTAATATGGCTGCAAACACCCATGATGCGAAACGCAGATTAATCAGTAAGACATTCCGTCGGTTGCTTGAGGTGAGTGAGAAGCAAACATTCACCGGTCCCCCTGAAAATGTTAGGGACCATGTAATGGCAGCTTCCAGGGCCCTTGGCAAAGGTGACTGCCAGAAGGCCTTTGATGTCATCAATTCTCTTGATGTTTGGAAGCTCCTTAGGAACCGTGAGCATGTTCTTGAGATGCTCAAGGCTAAGATCAAGGAAGAAGCTCTCAGGACCTATCTTTTTACCTTCTCCTCATCCTATAAGACTCTGAGCTTGGAACAACTCAGCACGTTGTTTGACCTTACAGAGGTCCAGACACACAGCATTGTTAGCAAGATGATGATCAACGAAGAGCTCTTTGCCAGTTGGGACCAGCCAACACGTTGCATTGTTTTCCATGACATTGAGCAGACTAGGCTGCAGGCTCTAGCATTCCAGTTGACTGAGAAGTTGGCAATCCTTGCCGAAAGTAATGAAAGGGCAACAGAAACAAGAATAGGTGGTGGTGGTGGGTTAGATCTACCTCAAAGGCGGAGAGACAACCAGGACTATGGTGCGGGATCAGTTGCTGGGAGTGGCGGTAGATGGCAAGATAACATGTCCTTCAATCAAAGGCAAGGTGGTGGCACTGGGCGTACAGGTTACAACGCTGGAGGGAGACCATTCAACCAAAATGCTGGAGGTGGGTATAACAGGGACCGCACAGGTCAATACAGAGGGACAGGGCAAAACACCCGTTATCAAGATGGTGCATATGCAGGATCAGGGAGGTCCGCAAGGGGTTCTCAGGACACTTCAACCCGCATGGTCAGTCTAAATAGAGGGCTTCACGCCTAA

Protein Analysis

927

Amino Acids

105.26

Weight (kDa)

5.36

Isoelectric Point (pI)

54.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF-3c_N PF05470 45 - 645 9.2e-251 Eukaryotic translation initiation factor 3 subunit 8 N-terminus
PCI PF01399 709 - 782 7.1e-14 PCI domain
EIF3CL_C PF26569 789 - 813 6.1e-08 EIF3CL-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1293, 1647
AarI CACCTGC 1 cut(s) 1608
Acc36I ACCTGC 2 cut(s) 799, 1608
AccB7I CCANNNNNTGG 1 cut(s) 2032
AccII CGCG 2 cut(s) 168, 1578
AciI CCGC 8 cut(s) 1273, 1576, 2476, 2501, 2523, 2644, 2718, 2746
AclWI GGATC 5 cut(s) 578, 591, 1139, 2512, 2713
AcsI RAATTY 1 cut(s) 755
AcuI CTGAAG 4 cut(s) 107, 482, 675, 1722
AcvI CACGTG 1 cut(s) 735
AfaI GTAC 4 cut(s) 219, 333, 1163, 2581
AfeI AGCGCT 1 cut(s) 194
AfiI CCNNNNNNNGG 5 cut(s) 83, 1272, 1273, 2032, 2251
AflIII ACRYGT 2 cut(s) 2324, 2541
AgeI ACCGGT 1 cut(s) 2000
AgsI TTSAA 9 cut(s) 62, 74, 442, 1126, 1169, 1217, 2551, 2611, 2742
AhdI GACNNNNNGTC 1 cut(s) 1962
AjnI CCWGG 5 cut(s) 25, 907, 1863, 2042, 2487
AleI CACNNNNGTG 1 cut(s) 1155
Alw21I GWGCWC 3 cut(s) 1422, 1863, 2301
Alw26I GTCTC 5 cut(s) 83, 917, 1816, 2475, 2596
AlwI GGATC 5 cut(s) 578, 591, 1139, 2512, 2713
AlwNI CAGNNNCTG 3 cut(s) 460, 862, 2513
Ama87I CYCGRG 3 cut(s) 777, 1368, 1415
Aor51HI AGCGCT 1 cut(s) 194
AoxI GGCC 6 cut(s) 106, 435, 1092, 1653, 2046, 2073
ApaI GGGCCC 1 cut(s) 2050
ApoI RAATTY 1 cut(s) 755
AseI ATTAAT 3 cut(s) 495, 1694, 1946
AsiGI ACCGGT 1 cut(s) 2000
Asp700I GAANNNNTTC 1 cut(s) 372
AspLEI GCGC 3 cut(s) 168, 195, 1708
AsuC2I CCSGG 1 cut(s) 105
AsuHPI GGTGA 7 cut(s) 98, 1370, 1535, 1589, 1990, 1990, 2072
AvaI CYCGRG 3 cut(s) 777, 1368, 1415
AxyI CCTNAGG 2 cut(s) 1268, 2114
BaeGI GKGCMC 2 cut(s) 924, 2050
BamHI GGATCC 1 cut(s) 583
BanII GRGCYC 4 cut(s) 1422, 1863, 2050, 2301
BauI CACGAG 3 cut(s) 1155, 1518, 1787
BbrPI CACGTG 1 cut(s) 735
BbsI GAAGAC 1 cut(s) 375
Bbv12I GWGCWC 3 cut(s) 1422, 1863, 2301
BbvCI CCTCAGC 1 cut(s) 1377
BccI CCATC 6 cut(s) 1055, 1402, 1459, 1615, 2523, 2684
BciT130I CCWGG 5 cut(s) 27, 909, 1865, 2044, 2489
BciVI GTATCC 2 cut(s) 733, 1002
BclI TGATCA 1 cut(s) 2286
BcnI CCSGG 1 cut(s) 105
BcoDI GTCTC 5 cut(s) 83, 917, 1816, 2475, 2596
BfaI CTAG 4 cut(s) 723, 1202, 2358, 2372
BfmI CTRYAG 1 cut(s) 2363
BfoI RGCGCY 1 cut(s) 196
BfuAI ACCTGC 2 cut(s) 799, 1608
BfuI GTATCC 2 cut(s) 733, 1002
BglII AGATCT 1 cut(s) 2461
Bme1390I CCNGG 6 cut(s) 27, 105, 909, 1865, 2044, 2489
BmeRI GACNNNNNGTC 1 cut(s) 1962
BmeT110I CYCGRG 3 cut(s) 777, 1368, 1415
BmiI GGNNCC 9 cut(s) 585, 720, 1050, 2005, 2024, 2048, 2120, 2315, 2642
BmrFI CCNGG 6 cut(s) 27, 105, 909, 1865, 2044, 2489
BmrI ACTGGG 2 cut(s) 262, 2583
BmsI GCATC 5 cut(s) 14, 391, 1303, 1921, 2130
BmuI ACTGGG 2 cut(s) 262, 2583
BpiI GAAGAC 1 cut(s) 375
BpmI CTGGAG 7 cut(s) 525, 884, 1782, 1835, 1886, 2616, 2643
Bpu10I CCTNAGC 5 cut(s) 381, 516, 1257, 1377, 1857
BpuEI CTTGAG 4 cut(s) 317, 1994, 2129, 2156
BpuMI CCSGG 1 cut(s) 105
BsaAI YACGTR 1 cut(s) 735
BsaBI GATNNNNATC 4 cut(s) 242, 903, 1539, 2285
BsaI GGTCTC 2 cut(s) 917, 2596
BsaJI CCNNGG 6 cut(s) 318, 432, 1656, 1762, 2043, 2050
BsaWI WCCGGW 1 cut(s) 2000
BsaXI ACNNNNNCTCC 2 cut(s) 2509, 2539
Bsc4I CCNNNNNNNGG 5 cut(s) 83, 1272, 1273, 2032, 2251
Bse118I RCCGGY 1 cut(s) 2000
Bse1I ACTGG 5 cut(s) 257, 799, 2307, 2380, 2578
Bse21I CCTNAGG 2 cut(s) 1268, 2114
Bse3DI GCAATG 3 cut(s) 433, 1142, 1530
Bse8I GATNNNNATC 4 cut(s) 242, 903, 1539, 2285
BseBI CCWGG 5 cut(s) 27, 909, 1865, 2044, 2489
BseDI CCNNGG 6 cut(s) 318, 432, 1656, 1762, 2043, 2050
BseGI GGATG 7 cut(s) 49, 406, 562, 1015, 1186, 1564, 2198
BseJI GATNNNNATC 4 cut(s) 242, 903, 1539, 2285
BseLI CCNNNNNNNGG 5 cut(s) 83, 1272, 1273, 2032, 2251
BseMI GCAATG 3 cut(s) 433, 1142, 1530
BseNI ACTGG 5 cut(s) 257, 799, 2307, 2380, 2578
BseRI GAGGAG 4 cut(s) 80, 638, 1834, 2185
BseSI GKGCMC 2 cut(s) 924, 2050
BseYI CCCAGC 1 cut(s) 2513
BsgI GTGCAG 2 cut(s) 837, 974
Bsh1236I CGCG 2 cut(s) 168, 1578
BshFI GGCC 6 cut(s) 108, 437, 1094, 1655, 2048, 2075
BshTI ACCGGT 1 cut(s) 2000
BsiHKAI GWGCWC 3 cut(s) 1422, 1863, 2301
BsiHKCI CYCGRG 3 cut(s) 777, 1368, 1415
BsiSI CCGG 2 cut(s) 105, 2001
BslFI GGGAC 7 cut(s) 1062, 1078, 1989, 2036, 2327, 2654, 2677
BslI CCNNNNNNNGG 5 cut(s) 83, 1272, 1273, 2032, 2251
BsmAI GTCTC 5 cut(s) 83, 917, 1816, 2475, 2596
BsmBI CGTCTC 1 cut(s) 1816
BsmFI GGGAC 7 cut(s) 1062, 1078, 1989, 2036, 2327, 2654, 2677
BsmI GAATGC 2 cut(s) 238, 2375
BsnI GGCC 6 cut(s) 108, 437, 1094, 1655, 2048, 2075
Bso31I GGTCTC 2 cut(s) 917, 2596
BsoBI CYCGRG 3 cut(s) 777, 1368, 1415
Bsp120I GGGCCC 1 cut(s) 2046
Bsp1286I GDGCHC 5 cut(s) 924, 1422, 1863, 2050, 2301
Bsp1407I TGTACA 1 cut(s) 217
Bsp143I GATC 8 cut(s) 176, 583, 1144, 2154, 2286, 2461, 2504, 2705
Bsp19I CCATGG 1 cut(s) 1656
BspACI CCGC 8 cut(s) 1273, 1576, 2476, 2501, 2523, 2644, 2718, 2746
BspANI GGCC 6 cut(s) 108, 437, 1094, 1655, 2048, 2075
BspFNI CGCG 2 cut(s) 168, 1578
BspLI GGNNCC 9 cut(s) 585, 720, 1050, 2005, 2024, 2048, 2120, 2315, 2642
BspMAI CTGCAG 1 cut(s) 2367
BspMI ACCTGC 2 cut(s) 799, 1608
BspPI GGATC 5 cut(s) 578, 591, 1139, 2512, 2713
BspQI GCTCTTC 2 cut(s) 1356, 2289
BspTNI GGTCTC 2 cut(s) 917, 2596
BsrDI GCAATG 3 cut(s) 433, 1142, 1530
BsrFI RCCGGY 1 cut(s) 2000
BsrGI TGTACA 1 cut(s) 217
BsrI ACTGG 5 cut(s) 257, 799, 2307, 2380, 2578
BssAI RCCGGY 1 cut(s) 2000
BssECI CCNNGG 6 cut(s) 318, 432, 1656, 1762, 2043, 2050
BssMI GATC 8 cut(s) 176, 583, 1144, 2154, 2286, 2461, 2504, 2705
BssSI CACGAG 3 cut(s) 1155, 1518, 1787
BssT1I CCWWGG 4 cut(s) 432, 1656, 1762, 2050
Bst2BI CACGAG 3 cut(s) 1155, 1518, 1787
Bst2UI CCWGG 5 cut(s) 27, 909, 1865, 2044, 2489
Bst4CI ACNGT 4 cut(s) 217, 745, 1006, 2123
Bst6I CTCTTC 6 cut(s) 57, 540, 633, 1356, 1735, 2289
BstAPI GCANNNNNTGC 2 cut(s) 961, 2405
BstAUI TGTACA 1 cut(s) 217
BstBAI YACGTR 1 cut(s) 735
BstC8I GCNNGC 4 cut(s) 263, 1133, 1758, 2367
BstDSI CCRYGG 1 cut(s) 1656
BstENI CCTNNNNNAGG 1 cut(s) 2249
BstF5I GGATG 7 cut(s) 49, 406, 562, 1015, 1186, 1564, 2198
BstFNI CGCG 2 cut(s) 168, 1578
BstH2I RGCGCY 1 cut(s) 196
BstHHI GCGC 3 cut(s) 168, 195, 1708
BstKTI GATC 8 cut(s) 179, 586, 1147, 2157, 2289, 2464, 2507, 2708
BstMAI GTCTC 5 cut(s) 83, 917, 1816, 2475, 2596
BstMBI GATC 8 cut(s) 176, 583, 1144, 2154, 2286, 2461, 2504, 2705
BstMWI GCNNNNNNNGC 9 cut(s) 814, 961, 1137, 1262, 1903, 2045, 2274, 2359, 2405
BstNI CCWGG 5 cut(s) 27, 909, 1865, 2044, 2489
BstNSI RCATGY 3 cut(s) 928, 2132, 2545
BstSCI CCNGG 6 cut(s) 25, 103, 907, 1863, 2042, 2487
BstSFI CTRYAG 1 cut(s) 2363
BstSLI GKGCMC 2 cut(s) 924, 2050
BstUI CGCG 2 cut(s) 168, 1578
BstV2I GAAGAC 1 cut(s) 375
BstX2I RGATCY 2 cut(s) 583, 2461
BstXI CCANNNNNNTGG 2 cut(s) 2495, 2621
BstYI RGATCY 2 cut(s) 583, 2461
Bsu36I CCTNAGG 2 cut(s) 1268, 2114
BsuI GTATCC 2 cut(s) 733, 1002
BsuRI GGCC 6 cut(s) 108, 437, 1094, 1655, 2048, 2075
BtgI CCRYGG 1 cut(s) 1656
BtgZI GCGATG 1 cut(s) 251
BtsCI GGATG 7 cut(s) 49, 406, 562, 1015, 1186, 1564, 2198
BtsI GCAGTG 1 cut(s) 1878
BtsIMutI CAGTG 4 cut(s) 96, 883, 1878, 2571
BveI ACCTGC 2 cut(s) 799, 1608
Cac8I GCNNGC 4 cut(s) 263, 1133, 1758, 2367
CaiI CAGNNNCTG 3 cut(s) 460, 862, 2513
CfoI GCGC 3 cut(s) 168, 195, 1708
Cfr10I RCCGGY 1 cut(s) 2000
CseI GACGC 1 cut(s) 157
Csp6I GTAC 4 cut(s) 218, 332, 1162, 2580
CspAI ACCGGT 1 cut(s) 2000
CviQI GTAC 4 cut(s) 218, 332, 1162, 2580
DpnI GATC 8 cut(s) 178, 585, 1146, 2156, 2288, 2463, 2506, 2707
DpnII GATC 8 cut(s) 176, 583, 1144, 2154, 2286, 2461, 2504, 2705
DraI TTTAAA 1 cut(s) 760
DriI GACNNNNNGTC 1 cut(s) 1962
Eam1104I CTCTTC 6 cut(s) 57, 540, 633, 1356, 1735, 2289
Eam1105I GACNNNNNGTC 1 cut(s) 1962
EarI CTCTTC 6 cut(s) 57, 540, 633, 1356, 1735, 2289
EciI GGCGGA 1 cut(s) 2491
Ecl136II GAGCTC 3 cut(s) 1420, 1861, 2299
Eco130I CCWWGG 4 cut(s) 432, 1656, 1762, 2050
Eco147I AGGCCT 2 cut(s) 437, 2075
Eco24I GRGCYC 4 cut(s) 1422, 1863, 2050, 2301
Eco31I GGTCTC 2 cut(s) 917, 2596
Eco32I GATATC 1 cut(s) 1784
Eco47III AGCGCT 1 cut(s) 194
Eco53kI GAGCTC 3 cut(s) 1420, 1861, 2299
Eco57I CTGAAG 4 cut(s) 107, 482, 675, 1722
Eco72I CACGTG 1 cut(s) 735
Eco81I CCTNAGG 2 cut(s) 1268, 2114
Eco88I CYCGRG 3 cut(s) 777, 1368, 1415
EcoICRI GAGCTC 3 cut(s) 1420, 1861, 2299
EcoNI CCTNNNNNAGG 1 cut(s) 2249
EcoO109I RGGNCCY 4 cut(s) 718, 2046, 2047, 2175
EcoRII CCWGG 5 cut(s) 25, 907, 1863, 2042, 2487
EcoRV GATATC 1 cut(s) 1784
EcoT14I CCWWGG 4 cut(s) 432, 1656, 1762, 2050
EcoT22I ATGCAT 2 cut(s) 1142, 1848
EcoT38I GRGCYC 4 cut(s) 1422, 1863, 2050, 2301
ErhI CCWWGG 4 cut(s) 432, 1656, 1762, 2050
Esp3I CGTCTC 1 cut(s) 1816
FalI AAGNNNNNCTT 2 cut(s) 1740, 1772
FaqI GGGAC 7 cut(s) 1062, 1078, 1989, 2036, 2327, 2654, 2677
FauI CCCGC 4 cut(s) 1266, 1583, 2494, 2753
FauNDI CATATG 2 cut(s) 1842, 2698
FbaI TGATCA 1 cut(s) 2286
FokI GGATG 7 cut(s) 56, 413, 569, 1022, 1193, 1571, 2185
FriOI GRGCYC 4 cut(s) 1422, 1863, 2050, 2301
FspBI CTAG 4 cut(s) 723, 1202, 2358, 2372
GlaI GCGC 3 cut(s) 167, 194, 1707
GsaI CCCAGC 1 cut(s) 2517
GsuI CTGGAG 7 cut(s) 525, 884, 1782, 1835, 1886, 2616, 2643
HaeII RGCGCY 1 cut(s) 196
HaeIII GGCC 6 cut(s) 108, 437, 1094, 1655, 2048, 2075
HapII CCGG 2 cut(s) 105, 2001
HgaI GACGC 1 cut(s) 157
HhaI GCGC 3 cut(s) 168, 195, 1708
Hin6I GCGC 3 cut(s) 166, 193, 1706
HinP1I GCGC 3 cut(s) 166, 193, 1706
HincII GTYRAC 2 cut(s) 748, 2385
HindII GTYRAC 2 cut(s) 748, 2385
HpaI GTTAAC 1 cut(s) 748
HpaII CCGG 2 cut(s) 105, 2001
HphI GGTGA 7 cut(s) 98, 1370, 1535, 1589, 1990, 1990, 2072
Hpy166II GTNNAC 3 cut(s) 220, 748, 2385
Hpy188I TCNGA 6 cut(s) 40, 154, 574, 1447, 1723, 2214
Hpy8I GTNNAC 3 cut(s) 220, 748, 2385
Hpy99I CGWCG 2 cut(s) 173, 1968
HpyCH4III ACNGT 4 cut(s) 217, 745, 1006, 2123
HpyCH4IV ACGT 4 cut(s) 734, 966, 2234, 2326
HpyF10VI GCNNNNNNNGC 9 cut(s) 814, 961, 1137, 1262, 1903, 2045, 2274, 2359, 2405
HpySE526I ACGT 4 cut(s) 734, 966, 2234, 2326
HspAI GCGC 3 cut(s) 166, 193, 1706
Ksp22I TGATCA 1 cut(s) 2286
KspAI GTTAAC 1 cut(s) 748
Kzo9I GATC 8 cut(s) 176, 583, 1144, 2154, 2286, 2461, 2504, 2705
LguI GCTCTTC 2 cut(s) 1356, 2289
LmnI GCTCC 2 cut(s) 1866, 2115
LweI GCATC 5 cut(s) 14, 391, 1303, 1921, 2130
MaeI CTAG 4 cut(s) 723, 1202, 2358, 2372
MaeII ACGT 4 cut(s) 734, 966, 2234, 2326
MaeIII GTNAC 6 cut(s) 53, 313, 1349, 1595, 2060, 2585
MalI GATC 8 cut(s) 178, 585, 1146, 2156, 2288, 2463, 2506, 2707
MboI GATC 8 cut(s) 176, 583, 1144, 2154, 2286, 2461, 2504, 2705
MflI RGATCY 2 cut(s) 583, 2461
MhlI GDGCHC 5 cut(s) 924, 1422, 1863, 2050, 2301
MlyI GAGTC 4 cut(s) 13, 1167, 1603, 2203
MmeI TCCRAC 1 cut(s) 1216
Mph1103I ATGCAT 2 cut(s) 1142, 1848
MroXI GAANNNNTTC 1 cut(s) 372
MseI TTAA 6 cut(s) 491, 495, 747, 759, 1694, 1946
MslI CAYNNNNRTG 1 cut(s) 1155
MspA1I CMGCKG 1 cut(s) 1376
MspI CCGG 2 cut(s) 105, 2001
MspR9I CCNGG 6 cut(s) 27, 105, 909, 1865, 2044, 2489
Mva1269I GAATGC 2 cut(s) 238, 2375
MvaI CCWGG 5 cut(s) 27, 909, 1865, 2044, 2489
MvnI CGCG 2 cut(s) 168, 1578
MwoI GCNNNNNNNGC 9 cut(s) 814, 961, 1137, 1262, 1903, 2045, 2274, 2359, 2405
NciI CCSGG 1 cut(s) 105
NcoI CCATGG 1 cut(s) 1656
NdeI CATATG 2 cut(s) 1842, 2698
NdeII GATC 8 cut(s) 176, 583, 1144, 2154, 2286, 2461, 2504, 2705
NlaIV GGNNCC 9 cut(s) 585, 720, 1050, 2005, 2024, 2048, 2120, 2315, 2642
NmuCI GTSAC 4 cut(s) 53, 1349, 1595, 2060
NsiI ATGCAT 2 cut(s) 1142, 1848
NspI RCATGY 3 cut(s) 928, 2132, 2545
OliI CACNNNNGTG 1 cut(s) 1155
PacI TTAATTAA 1 cut(s) 495
PaeR7I CTCGAG 1 cut(s) 1368
PaqCI CACCTGC 1 cut(s) 1608
PceI AGGCCT 2 cut(s) 437, 2075
PciI ACATGT 1 cut(s) 2541
PciSI GCTCTTC 2 cut(s) 1356, 2289
PctI GAATGC 2 cut(s) 238, 2375
PdmI GAANNNNTTC 1 cut(s) 372
PfeI GAWTC 7 cut(s) 12, 35, 149, 511, 569, 904, 1037
PflMI CCANNNNNTGG 1 cut(s) 2032
PfoI TCCNGGA 1 cut(s) 1863
PinAI ACCGGT 1 cut(s) 2000
PleI GAGTC 4 cut(s) 13, 1167, 1602, 2203
PmaCI CACGTG 1 cut(s) 735
PmlI CACGTG 1 cut(s) 735
PpsI GAGTC 4 cut(s) 13, 1167, 1602, 2203
Ppu21I YACGTR 1 cut(s) 735
PpuMI RGGWCCY 2 cut(s) 718, 2175
PscI ACATGT 1 cut(s) 2541
PshBI ATTAAT 3 cut(s) 495, 1694, 1946
PsiI TTATAA 2 cut(s) 1293, 1647
Psp124BI GAGCTC 3 cut(s) 1422, 1863, 2301
Psp5II RGGWCCY 2 cut(s) 718, 2175
Psp6I CCWGG 5 cut(s) 25, 907, 1863, 2042, 2487
PspCI CACGTG 1 cut(s) 735
PspFI CCCAGC 1 cut(s) 2513
PspGI CCWGG 5 cut(s) 25, 907, 1863, 2042, 2487
PspN4I GGNNCC 9 cut(s) 585, 720, 1050, 2005, 2024, 2048, 2120, 2315, 2642
PspOMI GGGCCC 1 cut(s) 2046
PspPPI RGGWCCY 2 cut(s) 718, 2175
PspXI VCTCGAGB 1 cut(s) 1368
PstI CTGCAG 1 cut(s) 2367
PstNI CAGNNNCTG 3 cut(s) 460, 862, 2513
PsuI RGATCY 2 cut(s) 583, 2461
PvuII CAGCTG 1 cut(s) 1376
RsaI GTAC 4 cut(s) 219, 333, 1163, 2581
RsaNI GTAC 4 cut(s) 218, 332, 1162, 2580
RseI CAYNNNNRTG 1 cut(s) 1155
SacI GAGCTC 3 cut(s) 1422, 1863, 2301
SapI GCTCTTC 2 cut(s) 1356, 2289
SaqAI TTAA 6 cut(s) 491, 495, 747, 759, 1694, 1946
Sau3AI GATC 8 cut(s) 176, 583, 1144, 2154, 2286, 2461, 2504, 2705
SchI GAGTC 4 cut(s) 13, 1167, 1603, 2203
ScrFI CCNGG 6 cut(s) 27, 105, 909, 1865, 2044, 2489
SduI GDGCHC 5 cut(s) 924, 1422, 1863, 2050, 2301
SfaNI GCATC 5 cut(s) 14, 391, 1303, 1921, 2130
SfcI CTRYAG 1 cut(s) 2363
Sfr274I CTCGAG 1 cut(s) 1368
SlaI CTCGAG 1 cut(s) 1368
SmiMI CAYNNNNRTG 1 cut(s) 1155
SmlI CTYRAG 5 cut(s) 296, 1368, 1973, 2135, 2144
SmoI CTYRAG 5 cut(s) 296, 1368, 1973, 2135, 2144
SseBI AGGCCT 2 cut(s) 437, 2075
SsiI CCGC 8 cut(s) 1273, 1576, 2476, 2501, 2523, 2644, 2718, 2746
SspI AATATT 1 cut(s) 1000
SspMI CTAG 4 cut(s) 723, 1202, 2358, 2372
SstI GAGCTC 3 cut(s) 1422, 1863, 2301
StuI AGGCCT 2 cut(s) 437, 2075
StyD4I CCNGG 6 cut(s) 25, 103, 907, 1863, 2042, 2487
StyI CCWWGG 4 cut(s) 432, 1656, 1762, 2050
TaaI ACNGT 4 cut(s) 217, 745, 1006, 2123
TaiI ACGT 4 cut(s) 737, 969, 2237, 2329
TaqI TCGA 5 cut(s) 10, 1278, 1369, 1429, 1631
TatI WGTACW 2 cut(s) 217, 1161
TfiI GAWTC 7 cut(s) 12, 35, 149, 511, 569, 904, 1037
Tru1I TTAA 6 cut(s) 491, 495, 747, 759, 1694, 1946
Tru9I TTAA 6 cut(s) 491, 495, 747, 759, 1694, 1946
TscAI CASTG 4 cut(s) 103, 883, 1878, 2578
TseFI GTSAC 4 cut(s) 53, 1349, 1595, 2060
Tsp45I GTSAC 4 cut(s) 53, 1349, 1595, 2060
TspDTI ATGAA 7 cut(s) 216, 242, 254, 464, 1050, 1389, 2433
TspGWI ACGGA 2 cut(s) 569, 1952
TspRI CASTG 4 cut(s) 103, 883, 1878, 2578
Van91I CCANNNNNTGG 1 cut(s) 2032
VspI ATTAAT 3 cut(s) 495, 1694, 1946
XagI CCTNNNNNAGG 1 cut(s) 2249
XapI RAATTY 1 cut(s) 755
XceI RCATGY 3 cut(s) 928, 2132, 2545
XcmI CCANNNNNNNNNTGG 1 cut(s) 1324
XhoI CTCGAG 1 cut(s) 1368
XmnI GAANNNNTTC 1 cut(s) 372
XspI CTAG 4 cut(s) 723, 1202, 2358, 2372
Zsp2I ATGCAT 2 cut(s) 1142, 1848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.