Translin-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G03780 AT2G03780 AT2G03780 |
| fragaria_vesca | FvH4_4g29320 FvH4_4g29320 |
| malus_domestica | MD13G1056700.v1.1 MD16G1056000.v1.1 |
| prunus_persica | Prupe.1G293300_v2.0.a1 Prupe.1G293300_v2.0.a1 |
| pyrus_communis | pycom16g04880 |
| rosa_chinensis | RchiOBHm_Chr3g0459601 RchiOBHm_Chr3g0459611 RchiOBHm_Chr4g0437361 |
| rosa_laevigata | RLG00000006441 |
| rosa_multiflora | Rmu_sc0004759.1_g000014 Rmu_sc0034128.1_g000001 Rmu_ssc0000087.1_g000062 |
| rosa_roxburghii | Rroxscaffold_2G00092570 Rroxscaffold_5G00378550 Rroxscaffold_7G00174990 |
| rosa_rugosa | Rorug01G0449100 Rorug04G0300700 Rorug04G0300800 Rorug04G0300800 Rorug04G0300900 Rorug04G0315600 Rorug05G0011200 |
| rosa_samantha | Rh2BG219700 Rh3CG281200 Rh4BG365200 Rh4BG377800 Rh4CG379400 Rh4CG391900 Rh6BG022300 Rh6BG380600 |
| rosa_wichuraiana | Rw3G022430 Rw4G031130 Rw4G031160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 35 |
| AccBSI | CCGCTC | 1 cut(s) | 42 |
| AccII | CGCG | 1 cut(s) | 165 |
| AciI | CCGC | 4 cut(s) | 42, 139, 529, 743 |
| AclWI | GGATC | 4 cut(s) | 282, 446, 736, 756 |
| AcsI | RAATTY | 4 cut(s) | 386, 546, 566, 600 |
| AcyI | GRCGYC | 2 cut(s) | 32, 93 |
| AfaI | GTAC | 3 cut(s) | 281, 354, 483 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 749 |
| AgsI | TTSAA | 4 cut(s) | 368, 464, 566, 680 |
| AjnI | CCWGG | 2 cut(s) | 346, 618 |
| AluBI | AGCT | 8 cut(s) | 248, 266, 304, 328, 371, 424, 523, 641 |
| AluI | AGCT | 8 cut(s) | 248, 266, 304, 328, 371, 424, 523, 641 |
| Alw26I | GTCTC | 2 cut(s) | 325, 462 |
| AlwI | GGATC | 4 cut(s) | 282, 446, 736, 756 |
| Ama87I | CYCGRG | 1 cut(s) | 497 |
| ApeKI | GCWGC | 3 cut(s) | 304, 371, 439 |
| ApoI | RAATTY | 4 cut(s) | 386, 546, 566, 600 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 219, 251 |
| AseI | ATTAAT | 1 cut(s) | 632 |
| AspS9I | GGNCC | 1 cut(s) | 44 |
| AsuC2I | CCSGG | 1 cut(s) | 289 |
| AsuHPI | GGTGA | 2 cut(s) | 163, 336 |
| AsuNHI | GCTAGC | 1 cut(s) | 641 |
| AvaI | CYCGRG | 1 cut(s) | 497 |
| AvaII | GGWCC | 1 cut(s) | 44 |
| BaeGI | GKGCMC | 1 cut(s) | 790 |
| BbsI | GAAGAC | 1 cut(s) | 662 |
| BbvI | GCAGC | 3 cut(s) | 291, 358, 426 |
| BccI | CCATC | 1 cut(s) | 548 |
| BciT130I | CCWGG | 2 cut(s) | 348, 620 |
| BciVI | GTATCC | 1 cut(s) | 661 |
| BcnI | CCSGG | 1 cut(s) | 289 |
| BcoDI | GTCTC | 2 cut(s) | 325, 462 |
| BfaI | CTAG | 1 cut(s) | 642 |
| BfmI | CTRYAG | 2 cut(s) | 239, 305 |
| BfuI | GTATCC | 1 cut(s) | 661 |
| BisI | GCNGC | 4 cut(s) | 305, 372, 440, 743 |
| BlsI | GCNGC | 4 cut(s) | 306, 373, 441, 744 |
| Bme1390I | CCNGG | 3 cut(s) | 289, 348, 620 |
| Bme18I | GGWCC | 1 cut(s) | 44 |
| BmeT110I | CYCGRG | 1 cut(s) | 497 |
| BmgT120I | GGNCC | 1 cut(s) | 44 |
| BmiI | GGNNCC | 2 cut(s) | 46, 754 |
| BmrFI | CCNGG | 3 cut(s) | 289, 348, 620 |
| BmrI | ACTGGG | 1 cut(s) | 408 |
| BmsI | GCATC | 1 cut(s) | 516 |
| BmtI | GCTAGC | 1 cut(s) | 645 |
| BmuI | ACTGGG | 1 cut(s) | 408 |
| BpiI | GAAGAC | 1 cut(s) | 662 |
| BpmI | CTGGAG | 1 cut(s) | 537 |
| BpuEI | CTTGAG | 1 cut(s) | 437 |
| BpuMI | CCSGG | 1 cut(s) | 289 |
| Bsa29I | ATCGAT | 1 cut(s) | 760 |
| BsaHI | GRCGYC | 2 cut(s) | 32, 93 |
| BsaJI | CCNNGG | 2 cut(s) | 347, 618 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 83, 113 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 749 |
| Bse1I | ACTGG | 2 cut(s) | 403, 520 |
| Bse3DI | GCAATG | 1 cut(s) | 652 |
| BseBI | CCWGG | 2 cut(s) | 348, 620 |
| BseCI | ATCGAT | 1 cut(s) | 760 |
| BseDI | CCNNGG | 2 cut(s) | 347, 618 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 749 |
| BseMI | GCAATG | 1 cut(s) | 652 |
| BseMII | CTCAG | 2 cut(s) | 320, 460 |
| BseNI | ACTGG | 2 cut(s) | 403, 520 |
| BseRI | GAGGAG | 2 cut(s) | 70, 434 |
| BseSI | GKGCMC | 1 cut(s) | 790 |
| BseXI | GCAGC | 3 cut(s) | 291, 358, 426 |
| Bsh1236I | CGCG | 1 cut(s) | 165 |
| Bsh1285I | CGRYCG | 1 cut(s) | 760 |
| BshVI | ATCGAT | 1 cut(s) | 760 |
| BsiEI | CGRYCG | 1 cut(s) | 760 |
| BsiHKCI | CYCGRG | 1 cut(s) | 497 |
| BsiSI | CCGG | 1 cut(s) | 289 |
| BslFI | GGGAC | 2 cut(s) | 325, 415 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 749 |
| BsmAI | GTCTC | 2 cut(s) | 325, 462 |
| BsmBI | CGTCTC | 2 cut(s) | 325, 462 |
| BsmFI | GGGAC | 2 cut(s) | 325, 415 |
| BsoBI | CYCGRG | 1 cut(s) | 497 |
| Bsp1286I | GDGCHC | 1 cut(s) | 790 |
| Bsp143I | GATC | 6 cut(s) | 274, 451, 474, 728, 757, 761 |
| Bsp68I | TCGCGA | 1 cut(s) | 165 |
| BspACI | CCGC | 4 cut(s) | 42, 139, 529, 743 |
| BspCNI | CTCAG | 2 cut(s) | 321, 459 |
| BspDI | ATCGAT | 1 cut(s) | 760 |
| BspFNI | CGCG | 1 cut(s) | 165 |
| BspLI | GGNNCC | 2 cut(s) | 46, 754 |
| BspMAI | CTGCAG | 2 cut(s) | 243, 309 |
| BspOI | GCTAGC | 1 cut(s) | 645 |
| BspPI | GGATC | 4 cut(s) | 282, 446, 736, 756 |
| BsrBI | CCGCTC | 1 cut(s) | 42 |
| BsrDI | GCAATG | 1 cut(s) | 652 |
| BsrI | ACTGG | 2 cut(s) | 403, 520 |
| BssECI | CCNNGG | 2 cut(s) | 347, 618 |
| BssMI | GATC | 6 cut(s) | 274, 451, 474, 728, 757, 761 |
| BssNI | GRCGYC | 2 cut(s) | 32, 93 |
| Bst2UI | CCWGG | 2 cut(s) | 348, 620 |
| BstACI | GRCGYC | 2 cut(s) | 32, 93 |
| BstC8I | GCNNGC | 3 cut(s) | 504, 643, 706 |
| BstDEI | CTNAG | 2 cut(s) | 329, 446 |
| BstFNI | CGCG | 1 cut(s) | 165 |
| BstKTI | GATC | 6 cut(s) | 277, 454, 477, 731, 760, 764 |
| BstMAI | GTCTC | 2 cut(s) | 325, 462 |
| BstMBI | GATC | 6 cut(s) | 274, 451, 474, 728, 757, 761 |
| BstMCI | CGRYCG | 1 cut(s) | 760 |
| BstNI | CCWGG | 2 cut(s) | 348, 620 |
| BstSCI | CCNGG | 3 cut(s) | 287, 346, 618 |
| BstSFI | CTRYAG | 2 cut(s) | 239, 305 |
| BstSLI | GKGCMC | 1 cut(s) | 790 |
| BstUI | CGCG | 1 cut(s) | 165 |
| BstV1I | GCAGC | 3 cut(s) | 291, 358, 426 |
| BstV2I | GAAGAC | 1 cut(s) | 662 |
| Bsu15I | ATCGAT | 1 cut(s) | 760 |
| BsuI | GTATCC | 1 cut(s) | 661 |
| BsuTUI | ATCGAT | 1 cut(s) | 760 |
| BtsI | GCAGTG | 1 cut(s) | 790 |
| BtsIMutI | CAGTG | 1 cut(s) | 790 |
| BtuMI | TCGCGA | 1 cut(s) | 165 |
| Cac8I | GCNNGC | 3 cut(s) | 504, 643, 706 |
| Cfr13I | GGNCC | 1 cut(s) | 44 |
| ClaI | ATCGAT | 1 cut(s) | 760 |
| CseI | GACGC | 1 cut(s) | 101 |
| Csp6I | GTAC | 3 cut(s) | 280, 353, 482 |
| CviAII | CATG | 3 cut(s) | 85, 652, 719 |
| CviQI | GTAC | 3 cut(s) | 280, 353, 482 |
| DdeI | CTNAG | 2 cut(s) | 329, 446 |
| DpnI | GATC | 6 cut(s) | 276, 453, 476, 730, 759, 763 |
| DpnII | GATC | 6 cut(s) | 274, 451, 474, 728, 757, 761 |
| DraI | TTTAAA | 1 cut(s) | 411 |
| Eco32I | GATATC | 1 cut(s) | 169 |
| Eco47I | GGWCC | 1 cut(s) | 44 |
| Eco88I | CYCGRG | 1 cut(s) | 497 |
| EcoRII | CCWGG | 2 cut(s) | 346, 618 |
| EcoRV | GATATC | 1 cut(s) | 169 |
| Esp3I | CGTCTC | 2 cut(s) | 325, 462 |
| FaeI | CATG | 3 cut(s) | 88, 655, 722 |
| FaiI | YATR | 9 cut(s) | 11, 86, 340, 363, 583, 653, 720, 738, 740 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 179, 211 |
| FaqI | GGGAC | 2 cut(s) | 325, 415 |
| FatI | CATG | 3 cut(s) | 84, 651, 718 |
| FauI | CCCGC | 1 cut(s) | 132 |
| Fnu4HI | GCNGC | 4 cut(s) | 305, 372, 440, 743 |
| Fsp4HI | GCNGC | 4 cut(s) | 305, 372, 440, 743 |
| FspBI | CTAG | 1 cut(s) | 642 |
| GluI | GCNGC | 4 cut(s) | 305, 372, 440, 743 |
| GsuI | CTGGAG | 1 cut(s) | 537 |
| HapII | CCGG | 1 cut(s) | 289 |
| HgaI | GACGC | 1 cut(s) | 101 |
| Hin1I | GRCGYC | 2 cut(s) | 32, 93 |
| Hin1II | CATG | 3 cut(s) | 88, 655, 722 |
| HinfI | GANTC | 3 cut(s) | 113, 210, 403 |
| HpaII | CCGG | 1 cut(s) | 289 |
| HphI | GGTGA | 2 cut(s) | 163, 336 |
| Hpy166II | GTNNAC | 2 cut(s) | 205, 218 |
| Hpy188I | TCNGA | 3 cut(s) | 553, 733, 757 |
| Hpy188III | TCNNGA | 3 cut(s) | 164, 416, 461 |
| Hpy8I | GTNNAC | 2 cut(s) | 205, 218 |
| Hpy99I | CGWCG | 4 cut(s) | 34, 37, 67, 795 |
| HpyAV | CCTTC | 3 cut(s) | 106, 388, 782 |
| HpyCH4IV | ACGT | 2 cut(s) | 32, 793 |
| HpyCH4V | TGCA | 7 cut(s) | 23, 241, 307, 374, 393, 472, 585 |
| HpyF3I | CTNAG | 2 cut(s) | 329, 446 |
| HpySE526I | ACGT | 2 cut(s) | 32, 793 |
| Hsp92I | GRCGYC | 2 cut(s) | 32, 93 |
| Hsp92II | CATG | 3 cut(s) | 88, 655, 722 |
| Kzo9I | GATC | 6 cut(s) | 274, 451, 474, 728, 757, 761 |
| LmnI | GCTCC | 2 cut(s) | 421, 758 |
| Lsp1109I | GCAGC | 3 cut(s) | 291, 358, 426 |
| LweI | GCATC | 1 cut(s) | 516 |
| MaeI | CTAG | 1 cut(s) | 642 |
| MaeII | ACGT | 2 cut(s) | 32, 793 |
| MaeIII | GTNAC | 1 cut(s) | 268 |
| MalI | GATC | 6 cut(s) | 276, 453, 476, 730, 759, 763 |
| MbiI | CCGCTC | 1 cut(s) | 42 |
| MboI | GATC | 6 cut(s) | 274, 451, 474, 728, 757, 761 |
| MboII | GAAGA | 2 cut(s) | 667, 703 |
| MfeI | CAATTG | 1 cut(s) | 537 |
| MhlI | GDGCHC | 1 cut(s) | 790 |
| MluCI | AATT | 5 cut(s) | 386, 537, 546, 566, 600 |
| MlyI | GAGTC | 1 cut(s) | 397 |
| MmeI | TCCRAC | 1 cut(s) | 789 |
| MnlI | CCTC | 6 cut(s) | 51, 88, 91, 223, 412, 719 |
| MseI | TTAA | 3 cut(s) | 177, 410, 632 |
| MspI | CCGG | 1 cut(s) | 289 |
| MspR9I | CCNGG | 3 cut(s) | 289, 348, 620 |
| MunI | CAATTG | 1 cut(s) | 537 |
| MvaI | CCWGG | 2 cut(s) | 348, 620 |
| MvnI | CGCG | 1 cut(s) | 165 |
| NciI | CCSGG | 1 cut(s) | 289 |
| NdeII | GATC | 6 cut(s) | 274, 451, 474, 728, 757, 761 |
| NheI | GCTAGC | 1 cut(s) | 641 |
| NlaIII | CATG | 3 cut(s) | 88, 655, 722 |
| NlaIV | GGNNCC | 2 cut(s) | 46, 754 |
| NmuCI | GTSAC | 1 cut(s) | 268 |
| NruI | TCGCGA | 1 cut(s) | 165 |
| PfeI | GAWTC | 2 cut(s) | 113, 210 |
| PkrI | GCNGC | 4 cut(s) | 306, 373, 441, 744 |
| Ple19I | CGATCG | 1 cut(s) | 760 |
| PleI | GAGTC | 1 cut(s) | 397 |
| PpsI | GAGTC | 1 cut(s) | 397 |
| PshBI | ATTAAT | 1 cut(s) | 632 |
| Psp6I | CCWGG | 2 cut(s) | 346, 618 |
| PspGI | CCWGG | 2 cut(s) | 346, 618 |
| PspN4I | GGNNCC | 2 cut(s) | 46, 754 |
| PspPI | GGNCC | 1 cut(s) | 44 |
| PstI | CTGCAG | 2 cut(s) | 243, 309 |
| PvuI | CGATCG | 1 cut(s) | 760 |
| RruI | TCGCGA | 1 cut(s) | 165 |
| RsaI | GTAC | 3 cut(s) | 281, 354, 483 |
| RsaNI | GTAC | 3 cut(s) | 280, 353, 482 |
| SaqAI | TTAA | 3 cut(s) | 177, 410, 632 |
| SatI | GCNGC | 4 cut(s) | 305, 372, 440, 743 |
| Sau3AI | GATC | 6 cut(s) | 274, 451, 474, 728, 757, 761 |
| Sau96I | GGNCC | 1 cut(s) | 44 |
| SchI | GAGTC | 1 cut(s) | 397 |
| ScrFI | CCNGG | 3 cut(s) | 289, 348, 620 |
| SduI | GDGCHC | 1 cut(s) | 790 |
| SfaNI | GCATC | 1 cut(s) | 516 |
| SfcI | CTRYAG | 2 cut(s) | 239, 305 |
| SinI | GGWCC | 1 cut(s) | 44 |
| SmlI | CTYRAG | 1 cut(s) | 416 |
| SmoI | CTYRAG | 1 cut(s) | 416 |
| Sse9I | AATT | 5 cut(s) | 386, 537, 546, 566, 600 |
| SsiI | CCGC | 4 cut(s) | 42, 139, 529, 743 |
| SspMI | CTAG | 1 cut(s) | 642 |
| StyD4I | CCNGG | 3 cut(s) | 287, 346, 618 |
| TaiI | ACGT | 2 cut(s) | 35, 796 |
| TaqI | TCGA | 2 cut(s) | 544, 760 |
| TasI | AATT | 5 cut(s) | 386, 537, 546, 566, 600 |
| TatI | WGTACW | 2 cut(s) | 279, 481 |
| TauI | GCSGC | 1 cut(s) | 745 |
| TfiI | GAWTC | 2 cut(s) | 113, 210 |
| Tru1I | TTAA | 3 cut(s) | 177, 410, 632 |
| Tru9I | TTAA | 3 cut(s) | 177, 410, 632 |
| TscAI | CASTG | 1 cut(s) | 790 |
| TseFI | GTSAC | 1 cut(s) | 268 |
| TseI | GCWGC | 3 cut(s) | 304, 371, 439 |
| Tsp45I | GTSAC | 1 cut(s) | 268 |
| TspDTI | ATGAA | 4 cut(s) | 101, 668, 704, 707 |
| TspGWI | ACGGA | 2 cut(s) | 287, 444 |
| TspRI | CASTG | 1 cut(s) | 790 |
| VpaK11BI | GGWCC | 1 cut(s) | 44 |
| VspI | ATTAAT | 1 cut(s) | 632 |
| XapI | RAATTY | 4 cut(s) | 386, 546, 566, 600 |
| XspI | CTAG | 1 cut(s) | 642 |
| ZraI | GACGTC | 1 cut(s) | 33 |