pycom16g26110

Transcription initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0001817
Physical Location & Seq
Forward (+)
28375847 .. 28384216
8370 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g26110.7

Sequence Viewer

Length: 2241 bp
ATGGATCCCTCCATTATGCAGAAGTTGCTTGAAGACGATGAGGACGAAACCATGCATTCGGGGGCGGATGTGGAGGCCTTCCAGGCTGCCCTCAATAAGGACATTGAAGGAGATGTCTCTGCTTCCCAGCCATCTGATTCCGACTCCGTGGTTTTGTCTCAAGGAACCAATATTACTTCCAGTCAGCCATTACCACAGTTCCAAACAACTGGTCAGGATGAAGGTACAGCGTGCCAAATGCAACATGACCAAAAAATTGCACAATCACAAGAACTGCATTCATATGAAATGGAGCTAAAGCAACAAGGATCTGTTGCTGAGAATATGCAGCTAAAAAGTGATGCCCCACAGGAACTTAGTCACTTTTCATTGTCCCAGAAGCAACCCCAAGGTTATCTTCAACAAAGGCAAGCTGAACAAAAACCCCTCCAGGTACCTGAAACAACTAGCATGCCGATTTCTGGAAAAATTCCCATCTCAAAACAGGAGCAGGACATTACACCTACTCCGCAAAGTGAATCTCAGTACTTAAAGCTTCAGAGGATGAGCAGTCAACAGGCAATGATCACTGAGCAGCCAAGCAACCCAATGAATCGTAGTAAACAAGTACCATTTGGCCTGTTACTGCCTGTCCTGTTGCCCCAGCTTGATAAAGACAGGGCCATGCAACTTAATACTCTATTTGGTAAACTCAAGAACAATGAAATCTCAAAAGACGCTTTTGTTCGGCACATTAGAAGTGTTGTTGGGGACCAGATGCTCAAATTGGCAGTAATGAAAGTACAATCGCAGCCAGGTCCTAAACACCAGTTACCGCCTCCGGCTTCGGTGCAGCAACAGCCTCCAAGGATGCCATCTACTAGTGCGGGTTCTACACAGTTCCCTGATCCTCGTTCATTTGCACTCCATCAGAGAGGCACCAAATCTCCGACAGACCCATTGTACATTCCATCTTCAACAGTTCAAATGCAGTCTGATTCACGCCATTCAGTCACTGAAAACAGTGCTAAAAAACTGCAGGAGGCAGAACATCAGTCAGACTCTCATGGAATGCAAGCAAGTCAAATGTCTTCTTCTAGTGTGGTAGCTGGGAATCAAGAAAGGGATCGCTCCTCAGGTCCTATGCCAATACTTAATAAGCAGCAACAACAGTTGCATTATCCACAATCATCCCTTTCCATGTATGGAAGTACTGGTGGTAATTATCACCCATATACAGGCACAGGTATCAATACATTGCCTCTCAAACAGCAACCTCATGATTCGCAACTAATGCAAATCCCACAATTTCAAAGCATGGGTTCAGCTCAGTCAGGTGGGGAAACAAAGGGAGGGAATGTTATGGGTGTGTCCAATTTGGAGAGGCAAAATTTGATGAAGGACCCTAGTAGAATGAAGGGTGGATCTGTTTCTGACTTTACAAATAATTCAACTTTACAACAGAATATAGCTCCTTGGAAATCCTCAAATAAAGAGCCACATGCTGGTCCTTTGTCATCAATGCCTTTTGTAAAACAGGAACCGACTGATCAGACTGCTGAGCAGCAGCACAAGCCCCCATTATCTAATTCACAGGAATTGCCTTCTGCTGCGCAACTTGAGCAGGGGAATGCGTCACCTGGAAATACAACAGACGAGTGTTTAGATAAACAATCTTCAAGAATGGGGCTTCAAGCATCAGTAAGCATTGGGGCTTCATCTTCTACAAGCACAGTGCCCCCGAATTCTGTTTCTTCTTCCATGACAACACAAGCTGATCCCAATGTCTCGTTAGGCCATCGAATACCATCTGGAACTTCTCCTGCTGGGATTAGTAATAGAGCACCTCTCAAAAAGCCTTCTATTGGCCAAAAGAAGCCTCTTGAAGTACTTGGTTCTTCACCACCTCCGTCAAGTAAGAAGCAAAAGGTATCTGGGACCTTTATCGATCAAAGCATTGAACAACTGAATGATGTGACTGCTGTTAGTGGAGTTAATCTCAGGGAAGAGGAAGAGCAGCTGTTTTCTGGGCCCAAGGAGGATAGTCGAGCTTCTGAAGCATCTCGAAAGTTTGTGCAAGAAGAAGAAGAAAGACTGATTTTGCAGAAGGATCCCTTGCAGAAAAAGTTGGCAGAACTTATGATCAAATGTGGACTGAAAAGCGTAAGCAATGATGTGGAGAGGTGCTTGTCGCTGTGTGTGGAGGAAAGAATGAGGGGACTAATTAATAATCTGATCAGACTGTGGCAGCAAACGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000428 GO:0001650 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003713 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005730 GO:0005911 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016070 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023051 GO:0030054 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044452 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0051059 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0055029 GO:0055044 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901796 GO:1902494 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 ko05016 ko05168 map03022 map05016 map05168
Pfam Domains
Protein Families
RST TAF4

Protein Analysis

747

Amino Acids

81.51

Weight (kDa)

6.03

Isoelectric Point (pI)

66.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1593
Acc65I GGTACC 1 cut(s) 433
AccB1I GGYRCC 2 cut(s) 433, 917
AccB7I CCANNNNNTGG 1 cut(s) 1484
AciI CCGC 4 cut(s) 65, 509, 815, 866
AclWI GGATC 8 cut(s) 12, 316, 881, 1113, 1411, 1751, 2084, 2097
AcoI YGGCCR 1 cut(s) 1846
AcsI RAATTY 3 cut(s) 468, 1369, 1723
AcuI CTGAAG 2 cut(s) 521, 2055
AfaI GTAC 8 cut(s) 226, 435, 527, 609, 783, 944, 1192, 1869
AfiI CCNNNNNNNGG 5 cut(s) 97, 461, 1217, 1484, 1844
AhlI ACTAGT 1 cut(s) 860
AjnI CCWGG 4 cut(s) 81, 429, 793, 1618
AjuI GAANNNNNNNTTGG 2 cut(s) 381, 413
Alw21I GWGCWC 1 cut(s) 1825
Alw26I GTCTC 3 cut(s) 121, 162, 1771
AlwI GGATC 8 cut(s) 12, 316, 881, 1113, 1411, 1751, 2084, 2097
AlwNI CAGNNNCTG 1 cut(s) 995
AoxI GGCC 6 cut(s) 75, 616, 660, 1774, 1846, 2009
ApaI GGGCCC 1 cut(s) 2013
ApoI RAATTY 3 cut(s) 468, 1369, 1723
ArsI GACNNNNNNTTYG 2 cut(s) 196, 228
AseI ATTAAT 1 cut(s) 2205
Asp718I GGTACC 1 cut(s) 433
AspLEI GCGC 1 cut(s) 1594
AspS9I GGNCC 9 cut(s) 660, 751, 797, 1118, 1381, 1487, 1917, 2009, 2010
AsuHPI GGTGA 3 cut(s) 1199, 1608, 1872
AvaII GGWCC 6 cut(s) 751, 797, 1118, 1381, 1487, 1917
AxyI CCTNAGG 1 cut(s) 1114
BaeGI GKGCMC 2 cut(s) 1719, 2013
BalI TGGCCA 1 cut(s) 1848
BamHI GGATCC 2 cut(s) 4, 2089
BanI GGYRCC 2 cut(s) 433, 917
BanII GRGCYC 1 cut(s) 2013
BbsI GAAGAC 2 cut(s) 39, 1062
Bbv12I GWGCWC 1 cut(s) 1825
BccI CCATC 7 cut(s) 139, 482, 862, 915, 958, 1785, 1795
BciT130I CCWGG 4 cut(s) 83, 431, 795, 1620
BclI TGATCA 4 cut(s) 564, 1528, 2121, 2214
BcoDI GTCTC 3 cut(s) 121, 162, 1771
BcuI ACTAGT 1 cut(s) 860
BfaI CTAG 4 cut(s) 447, 861, 1077, 1386
BfmI CTRYAG 1 cut(s) 1016
BglI GCCNNNNNGGC 1 cut(s) 83
BlpI GCTNAGC 1 cut(s) 1539
BmcAI AGTACT 3 cut(s) 527, 1192, 1869
Bme1390I CCNGG 4 cut(s) 83, 431, 795, 1620
Bme18I GGWCC 6 cut(s) 751, 797, 1118, 1381, 1487, 1917
BmgT120I GGNCC 9 cut(s) 660, 751, 797, 1118, 1381, 1487, 1917, 2009, 2010
BmrFI CCNGG 4 cut(s) 83, 431, 795, 1620
BmsI GCATC 5 cut(s) 331, 747, 840, 1685, 2048
BpiI GAAGAC 2 cut(s) 39, 1062
BplI GAGNNNNNCTC 4 cut(s) 1812, 1844, 1962, 1994
BpmI CTGGAG 1 cut(s) 413
Bpu1102I GCTNAGC 1 cut(s) 1539
BpuEI CTTGAG 3 cut(s) 144, 677, 1619
Bsa29I ATCGAT 1 cut(s) 1926
BsaJI CCNNGG 5 cut(s) 147, 388, 845, 1454, 2013
BsaXI ACNNNNNCTCC 6 cut(s) 490, 520, 910, 940, 1323, 1353
Bsc4I CCNNNNNNNGG 5 cut(s) 97, 461, 1217, 1484, 1844
Bse1I ACTGG 4 cut(s) 180, 214, 808, 1198
Bse21I CCTNAGG 1 cut(s) 1114
Bse3DI GCAATG 3 cut(s) 567, 1235, 2155
BseBI CCWGG 4 cut(s) 83, 431, 795, 1620
BseCI ATCGAT 1 cut(s) 1926
BseDI CCNNGG 5 cut(s) 147, 388, 845, 1454, 2013
BseGI GGATG 5 cut(s) 73, 223, 549, 855, 1169
BseLI CCNNNNNNNGG 5 cut(s) 97, 461, 1217, 1484, 1844
BseMI GCAATG 3 cut(s) 567, 1235, 2155
BseMII CTCAG 7 cut(s) 309, 536, 561, 1128, 1322, 1530, 1993
BseNI ACTGG 4 cut(s) 180, 214, 808, 1198
BseRI GAGGAG 1 cut(s) 1102
BseSI GKGCMC 2 cut(s) 1719, 2013
BseYI CCCAGC 4 cut(s) 126, 642, 1088, 1805
BsgI GTGCAG 1 cut(s) 851
BshFI GGCC 6 cut(s) 77, 618, 662, 1776, 1848, 2011
BshNI GGYRCC 2 cut(s) 433, 917
BshVI ATCGAT 1 cut(s) 1926
BsiHKAI GWGCWC 1 cut(s) 1825
BsiSI CCGG 1 cut(s) 821
BslFI GGGAC 4 cut(s) 358, 764, 1930, 2211
BslI CCNNNNNNNGG 5 cut(s) 97, 461, 1217, 1484, 1844
BsmAI GTCTC 3 cut(s) 121, 162, 1771
BsmFI GGGAC 4 cut(s) 358, 764, 1930, 2211
BsmI GAATGC 4 cut(s) 55, 277, 1056, 1615
BsnI GGCC 6 cut(s) 77, 618, 662, 1776, 1848, 2011
Bsp120I GGGCCC 1 cut(s) 2009
Bsp1286I GDGCHC 3 cut(s) 1719, 1825, 2013
Bsp1407I TGTACA 1 cut(s) 942
Bsp1720I GCTNAGC 1 cut(s) 1539
BspACI CCGC 4 cut(s) 65, 509, 815, 866
BspANI GGCC 6 cut(s) 77, 618, 662, 1776, 1848, 2011
BspCNI CTCAG 7 cut(s) 310, 535, 562, 1127, 1321, 1531, 1992
BspDI ATCGAT 1 cut(s) 1926
BspHI TCATGA 1 cut(s) 1258
BspMAI CTGCAG 1 cut(s) 1020
BspPI GGATC 8 cut(s) 12, 316, 881, 1113, 1411, 1751, 2084, 2097
BspQI GCTCTTC 1 cut(s) 1986
BspT107I GGYRCC 2 cut(s) 433, 917
BsrDI GCAATG 3 cut(s) 567, 1235, 2155
BsrGI TGTACA 1 cut(s) 942
BsrI ACTGG 4 cut(s) 180, 214, 808, 1198
BssECI CCNNGG 5 cut(s) 147, 388, 845, 1454, 2013
BssT1I CCWWGG 4 cut(s) 388, 845, 1454, 2013
Bst2UI CCWGG 4 cut(s) 83, 431, 795, 1620
Bst4CI ACNGT 7 cut(s) 198, 879, 961, 1004, 1152, 1714, 2223
Bst6I CTCTTC 2 cut(s) 1980, 1986
BstAPI GCANNNNNTGC 2 cut(s) 25, 1273
BstAUI TGTACA 1 cut(s) 942
BstC8I GCNNGC 4 cut(s) 232, 411, 452, 1056
BstDEI CTNAG 8 cut(s) 318, 356, 522, 570, 1114, 1308, 1539, 1979
BstDSI CCRYGG 1 cut(s) 147
BstENI CCTNNNNNAGG 1 cut(s) 95
BstF5I GGATG 5 cut(s) 73, 223, 549, 855, 1169
BstHHI GCGC 1 cut(s) 1594
BstMAI GTCTC 3 cut(s) 121, 162, 1771
BstMWI GCNNNNNNNGC 7 cut(s) 25, 83, 838, 1273, 1552, 1600, 2036
BstNI CCWGG 4 cut(s) 83, 431, 795, 1620
BstNSI RCATGY 2 cut(s) 454, 1484
BstSCI CCNGG 4 cut(s) 81, 429, 793, 1618
BstSFI CTRYAG 1 cut(s) 1016
BstSLI GKGCMC 2 cut(s) 1719, 2013
BstV2I GAAGAC 2 cut(s) 39, 1062
BstX2I RGATCY 4 cut(s) 4, 308, 1403, 2089
BstXI CCANNNNNNTGG 1 cut(s) 209
BstYI RGATCY 4 cut(s) 4, 308, 1403, 2089
Bsu15I ATCGAT 1 cut(s) 1926
Bsu36I CCTNAGG 1 cut(s) 1114
BsuRI GGCC 6 cut(s) 77, 618, 662, 1776, 1848, 2011
BsuTUI ATCGAT 1 cut(s) 1926
BtgI CCRYGG 1 cut(s) 147
BtsCI GGATG 5 cut(s) 73, 223, 549, 855, 1169
BtsIMutI CAGTG 4 cut(s) 567, 993, 1009, 1719
Cac8I GCNNGC 4 cut(s) 232, 411, 452, 1056
CaiI CAGNNNCTG 1 cut(s) 995
CciI TCATGA 1 cut(s) 1258
CfoI GCGC 1 cut(s) 1594
Cfr13I GGNCC 9 cut(s) 660, 751, 797, 1118, 1381, 1487, 1917, 2009, 2010
ClaI ATCGAT 1 cut(s) 1926
CseI GACGC 2 cut(s) 725, 1602
Csp6I GTAC 8 cut(s) 225, 434, 526, 608, 782, 943, 1191, 1868
CviQI GTAC 8 cut(s) 225, 434, 526, 608, 782, 943, 1191, 1868
DdeI CTNAG 8 cut(s) 318, 356, 522, 570, 1114, 1308, 1539, 1979
EaeI YGGCCR 1 cut(s) 1846
Eam1104I CTCTTC 2 cut(s) 1980, 1986
EarI CTCTTC 2 cut(s) 1980, 1986
EciI GGCGGA 1 cut(s) 80
Eco130I CCWWGG 4 cut(s) 388, 845, 1454, 2013
Eco147I AGGCCT 1 cut(s) 77
Eco24I GRGCYC 1 cut(s) 2013
Eco47I GGWCC 6 cut(s) 751, 797, 1118, 1381, 1487, 1917
Eco57I CTGAAG 2 cut(s) 521, 2055
Eco81I CCTNAGG 1 cut(s) 1114
EcoNI CCTNNNNNAGG 1 cut(s) 95
EcoO109I RGGNCCY 4 cut(s) 797, 1118, 1381, 1917
EcoRI GAATTC 1 cut(s) 1723
EcoRII CCWGG 4 cut(s) 81, 429, 793, 1618
EcoT14I CCWWGG 4 cut(s) 388, 845, 1454, 2013
EcoT22I ATGCAT 1 cut(s) 57
EcoT38I GRGCYC 1 cut(s) 2013
ErhI CCWWGG 4 cut(s) 388, 845, 1454, 2013
FalI AAGNNNNNCTT 4 cut(s) 381, 413, 2078, 2110
FaqI GGGAC 4 cut(s) 358, 764, 1930, 2211
FauI CCCGC 1 cut(s) 859
FauNDI CATATG 1 cut(s) 283
FbaI TGATCA 4 cut(s) 564, 1528, 2121, 2214
FokI GGATG 5 cut(s) 80, 230, 556, 862, 1156
FriOI GRGCYC 1 cut(s) 2013
FspBI CTAG 4 cut(s) 447, 861, 1077, 1386
FspI TGCGCA 1 cut(s) 1593
GlaI GCGC 1 cut(s) 1593
GsaI CCCAGC 4 cut(s) 130, 646, 1092, 1809
GsuI CTGGAG 1 cut(s) 413
HaeIII GGCC 6 cut(s) 77, 618, 662, 1776, 1848, 2011
HapII CCGG 1 cut(s) 821
HgaI GACGC 2 cut(s) 725, 1602
HhaI GCGC 1 cut(s) 1594
Hin6I GCGC 1 cut(s) 1592
HinP1I GCGC 1 cut(s) 1592
HincII GTYRAC 1 cut(s) 554
HindII GTYRAC 1 cut(s) 554
HindIII AAGCTT 1 cut(s) 533
HinfI GANTC 8 cut(s) 137, 143, 518, 592, 977, 1040, 1093, 1262
HpaII CCGG 1 cut(s) 821
HphI GGTGA 3 cut(s) 1199, 1608, 1872
Hpy166II GTNNAC 4 cut(s) 554, 602, 689, 2132
Hpy188III TCNNGA 9 cut(s) 215, 462, 694, 1097, 1259, 1659, 1791, 1862, 2043
Hpy8I GTNNAC 4 cut(s) 554, 602, 689, 2132
HpyAV CCTTC 8 cut(s) 88, 101, 215, 1372, 1390, 1593, 1848, 2080
HpyCH4III ACNGT 7 cut(s) 198, 879, 961, 1004, 1152, 1714, 2223
HpyF10VI GCNNNNNNNGC 7 cut(s) 25, 83, 838, 1273, 1552, 1600, 2036
HpyF3I CTNAG 8 cut(s) 318, 356, 522, 570, 1114, 1308, 1539, 1979
HspAI GCGC 1 cut(s) 1592
KpnI GGTACC 1 cut(s) 437
Ksp22I TGATCA 4 cut(s) 564, 1528, 2121, 2214
LguI GCTCTTC 1 cut(s) 1986
LmnI GCTCC 4 cut(s) 292, 487, 1115, 1456
LweI GCATC 5 cut(s) 331, 747, 840, 1685, 2048
MaeI CTAG 4 cut(s) 447, 861, 1077, 1386
MaeIII GTNAC 6 cut(s) 359, 621, 810, 991, 1614, 1954
MflI RGATCY 4 cut(s) 4, 308, 1403, 2089
MhlI GDGCHC 3 cut(s) 1719, 1825, 2013
MlsI TGGCCA 1 cut(s) 1848
MluNI TGGCCA 1 cut(s) 1848
MlyI GAGTC 2 cut(s) 137, 1034
MmeI TCCRAC 2 cut(s) 165, 953
Mox20I TGGCCA 1 cut(s) 1848
Mph1103I ATGCAT 1 cut(s) 57
MscI TGGCCA 1 cut(s) 1848
MseI TTAA 5 cut(s) 530, 672, 1134, 1974, 2205
MslI CAYNNNNRTG 1 cut(s) 282
Msp20I TGGCCA 1 cut(s) 1848
MspA1I CMGCKG 1 cut(s) 1999
MspI CCGG 1 cut(s) 821
MspR9I CCNGG 4 cut(s) 83, 431, 795, 1620
Mva1269I GAATGC 4 cut(s) 55, 277, 1056, 1615
MvaI CCWGG 4 cut(s) 83, 431, 795, 1620
MwoI GCNNNNNNNGC 7 cut(s) 25, 83, 838, 1273, 1552, 1600, 2036
NdeI CATATG 1 cut(s) 283
NmuCI GTSAC 4 cut(s) 359, 991, 1614, 1954
NsbI TGCGCA 1 cut(s) 1593
NsiI ATGCAT 1 cut(s) 57
NspI RCATGY 2 cut(s) 454, 1484
PaeI GCATGC 1 cut(s) 454
PagI TCATGA 1 cut(s) 1258
PceI AGGCCT 1 cut(s) 77
PciSI GCTCTTC 1 cut(s) 1986
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PctI GAATGC 4 cut(s) 55, 277, 1056, 1615
PfeI GAWTC 6 cut(s) 137, 518, 592, 977, 1093, 1262
PflMI CCANNNNNTGG 1 cut(s) 1484
PleI GAGTC 2 cut(s) 137, 1034
PpsI GAGTC 2 cut(s) 137, 1034
PpuMI RGGWCCY 4 cut(s) 797, 1118, 1381, 1917
PshBI ATTAAT 1 cut(s) 2205
Psp5II RGGWCCY 4 cut(s) 797, 1118, 1381, 1917
Psp6I CCWGG 4 cut(s) 81, 429, 793, 1618
PspFI CCCAGC 4 cut(s) 126, 642, 1088, 1805
PspGI CCWGG 4 cut(s) 81, 429, 793, 1618
PspOMI GGGCCC 1 cut(s) 2009
PspPI GGNCC 9 cut(s) 660, 751, 797, 1118, 1381, 1487, 1917, 2009, 2010
PspPPI RGGWCCY 4 cut(s) 797, 1118, 1381, 1917
PsrI GAACNNNNNNTAC 2 cut(s) 157, 189
PstI CTGCAG 1 cut(s) 1020
PstNI CAGNNNCTG 1 cut(s) 995
PsuI RGATCY 4 cut(s) 4, 308, 1403, 2089
PvuII CAGCTG 1 cut(s) 1999
RsaI GTAC 8 cut(s) 226, 435, 527, 609, 783, 944, 1192, 1869
RsaNI GTAC 8 cut(s) 225, 434, 526, 608, 782, 943, 1191, 1868
RseI CAYNNNNRTG 1 cut(s) 282
SapI GCTCTTC 1 cut(s) 1986
SaqAI TTAA 5 cut(s) 530, 672, 1134, 1974, 2205
Sau96I GGNCC 9 cut(s) 660, 751, 797, 1118, 1381, 1487, 1917, 2009, 2010
ScaI AGTACT 3 cut(s) 527, 1192, 1869
SchI GAGTC 2 cut(s) 137, 1034
ScrFI CCNGG 4 cut(s) 83, 431, 795, 1620
SduI GDGCHC 3 cut(s) 1719, 1825, 2013
SfaNI GCATC 5 cut(s) 331, 747, 840, 1685, 2048
SfcI CTRYAG 1 cut(s) 1016
SinI GGWCC 6 cut(s) 751, 797, 1118, 1381, 1487, 1917
SmiMI CAYNNNNRTG 1 cut(s) 282
SmlI CTYRAG 3 cut(s) 159, 692, 1598
SmoI CTYRAG 3 cut(s) 159, 692, 1598
SpeI ACTAGT 1 cut(s) 860
SphI GCATGC 1 cut(s) 454
SseBI AGGCCT 1 cut(s) 77
SsiI CCGC 4 cut(s) 65, 509, 815, 866
SspI AATATT 1 cut(s) 172
SspMI CTAG 4 cut(s) 447, 861, 1077, 1386
StuI AGGCCT 1 cut(s) 77
StyD4I CCNGG 4 cut(s) 81, 429, 793, 1618
StyI CCWWGG 4 cut(s) 388, 845, 1454, 2013
TaaI ACNGT 7 cut(s) 198, 879, 961, 1004, 1152, 1714, 2223
TaqI TCGA 4 cut(s) 1780, 1926, 2026, 2044
TatI WGTACW 5 cut(s) 525, 781, 942, 1190, 1867
TfiI GAWTC 6 cut(s) 137, 518, 592, 977, 1093, 1262
Tru1I TTAA 5 cut(s) 530, 672, 1134, 1974, 2205
Tru9I TTAA 5 cut(s) 530, 672, 1134, 1974, 2205
TscAI CASTG 4 cut(s) 574, 1000, 1009, 1719
TseFI GTSAC 4 cut(s) 359, 991, 1614, 1954
Tsp45I GTSAC 4 cut(s) 359, 991, 1614, 1954
TspGWI ACGGA 2 cut(s) 136, 1878
TspRI CASTG 4 cut(s) 574, 1000, 1009, 1719
Van91I CCANNNNNTGG 1 cut(s) 1484
VpaK11BI GGWCC 6 cut(s) 751, 797, 1118, 1381, 1487, 1917
VspI ATTAAT 1 cut(s) 2205
XagI CCTNNNNNAGG 1 cut(s) 95
XapI RAATTY 3 cut(s) 468, 1369, 1723
XceI RCATGY 2 cut(s) 454, 1484
XspI CTAG 4 cut(s) 447, 861, 1077, 1386
ZrmI AGTACT 3 cut(s) 527, 1192, 1869
Zsp2I ATGCAT 1 cut(s) 57
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.