Transcription initiation factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 117 |
| AdeI | CACNNNGTG | 1 cut(s) | 50 |
| AfaI | GTAC | 1 cut(s) | 162 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 179, 226 |
| AgsI | TTSAA | 3 cut(s) | 20, 250, 280 |
| AluBI | AGCT | 1 cut(s) | 310 |
| AluI | AGCT | 1 cut(s) | 310 |
| ApeKI | GCWGC | 3 cut(s) | 101, 113, 211 |
| AspLEI | GCGC | 1 cut(s) | 106 |
| AsuHPI | GGTGA | 2 cut(s) | 79, 194 |
| BbvCI | CCTCAGC | 1 cut(s) | 255 |
| BbvI | GCAGC | 3 cut(s) | 113, 125, 198 |
| BccI | CCATC | 2 cut(s) | 197, 280 |
| BisI | GCNGC | 4 cut(s) | 102, 114, 117, 212 |
| BlsI | GCNGC | 4 cut(s) | 103, 115, 118, 213 |
| Bpu10I | CCTNAGC | 1 cut(s) | 255 |
| BsaJI | CCNNGG | 1 cut(s) | 220 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 179, 226 |
| BseDI | CCNNGG | 1 cut(s) | 220 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 179, 226 |
| BseMII | CTCAG | 2 cut(s) | 140, 246 |
| BseRI | GAGGAG | 1 cut(s) | 349 |
| BseXI | GCAGC | 3 cut(s) | 113, 125, 198 |
| BseYI | CCCAGC | 1 cut(s) | 310 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 179, 226 |
| Bsp1407I | TGTACA | 1 cut(s) | 160 |
| BspACI | CCGC | 1 cut(s) | 117 |
| BspCNI | CTCAG | 2 cut(s) | 141, 247 |
| BsrGI | TGTACA | 1 cut(s) | 160 |
| BssECI | CCNNGG | 1 cut(s) | 220 |
| Bst4CI | ACNGT | 2 cut(s) | 160, 199 |
| BstAUI | TGTACA | 1 cut(s) | 160 |
| BstC8I | GCNNGC | 1 cut(s) | 209 |
| BstDEI | CTNAG | 2 cut(s) | 149, 255 |
| BstHHI | GCGC | 1 cut(s) | 106 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 98, 110 |
| BstV1I | GCAGC | 3 cut(s) | 113, 125, 198 |
| BtsIMutI | CAGTG | 2 cut(s) | 146, 156 |
| Cac8I | GCNNGC | 1 cut(s) | 209 |
| CfoI | GCGC | 1 cut(s) | 106 |
| Csp6I | GTAC | 1 cut(s) | 161 |
| CviJI | RGCY | 4 cut(s) | 116, 207, 254, 310 |
| CviKI_1 | RGCY | 4 cut(s) | 116, 207, 254, 310 |
| CviQI | GTAC | 1 cut(s) | 161 |
| DdeI | CTNAG | 2 cut(s) | 149, 255 |
| DraIII | CACNNNGTG | 1 cut(s) | 50 |
| FauNDI | CATATG | 3 cut(s) | 108, 129, 175 |
| Fnu4HI | GCNGC | 4 cut(s) | 102, 114, 117, 212 |
| Fsp4HI | GCNGC | 4 cut(s) | 102, 114, 117, 212 |
| GlaI | GCGC | 1 cut(s) | 105 |
| GluI | GCNGC | 4 cut(s) | 102, 114, 117, 212 |
| GsaI | CCCAGC | 1 cut(s) | 314 |
| HhaI | GCGC | 1 cut(s) | 106 |
| Hin6I | GCGC | 1 cut(s) | 104 |
| HinP1I | GCGC | 1 cut(s) | 104 |
| HphI | GGTGA | 2 cut(s) | 79, 194 |
| Hpy188I | TCNGA | 3 cut(s) | 85, 224, 346 |
| HpyAV | CCTTC | 1 cut(s) | 49 |
| HpyCH4III | ACNGT | 2 cut(s) | 160, 199 |
| HpyCH4V | TGCA | 2 cut(s) | 214, 275 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 98, 110 |
| HpyF3I | CTNAG | 2 cut(s) | 149, 255 |
| HspAI | GCGC | 1 cut(s) | 104 |
| LpnPI | CCDG | 1 cut(s) | 296 |
| Lsp1109I | GCAGC | 3 cut(s) | 113, 125, 198 |
| MfeI | CAATTG | 1 cut(s) | 358 |
| MluCI | AATT | 2 cut(s) | 261, 358 |
| MnlI | CCTC | 7 cut(s) | 55, 153, 180, 230, 250, 311, 327 |
| MunI | CAATTG | 1 cut(s) | 358 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 98, 110 |
| NdeI | CATATG | 3 cut(s) | 108, 129, 175 |
| PkrI | GCNGC | 4 cut(s) | 103, 115, 118, 213 |
| PspFI | CCCAGC | 1 cut(s) | 310 |
| RsaI | GTAC | 1 cut(s) | 162 |
| RsaNI | GTAC | 1 cut(s) | 161 |
| SatI | GCNGC | 4 cut(s) | 102, 114, 117, 212 |
| SetI | ASST | 6 cut(s) | 60, 172, 222, 303, 312, 322 |
| SgeI | CNNG | 7 cut(s) | 46, 101, 149, 220, 233, 262, 323 |
| Sse9I | AATT | 2 cut(s) | 261, 358 |
| SsiI | CCGC | 1 cut(s) | 117 |
| TaaI | ACNGT | 2 cut(s) | 160, 199 |
| TasI | AATT | 2 cut(s) | 261, 358 |
| TatI | WGTACW | 1 cut(s) | 160 |
| TauI | GCSGC | 1 cut(s) | 119 |
| TscAI | CASTG | 2 cut(s) | 153, 163 |
| TseI | GCWGC | 3 cut(s) | 101, 113, 211 |
| TspDTI | ATGAA | 2 cut(s) | 146, 201 |
| TspRI | CASTG | 2 cut(s) | 153, 163 |