Rorug01G0070400

Transcription initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0001817
Physical Location & Seq
Forward (+)
11531757 .. 11533757
2001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0070400.1

Sequence Viewer

Length: 2001 bp
ATGGGAGCAGCAAAGCAAACAGATTTAGCATGCATTTCAGAAGGTGAAGGATCATCATGTGTAGAAAAACATGCCATCCTTGAAGCAGCACCTATTGTGTCATCCTACAATGACAAAATCCGTCCTCTCCTTGACGCCGTTGACAAGCTCAGGAGCCTCATGGTTATGGAGGAAGGCATTCAGCTCCCCACCATTGTTGTTGTAGGTGACCAATCATCTGGCAAGTCAAGCGTCCTTGAATCCCTGGCCGGCATCAGCCTGCCACGTGGACAAGGTATCTGCACCAGGGTACCCCTTATAATGAGGCTTCAACACCACTCTAGTCCTGAACCAGAGTTCCAGTTGGAGTACAATGGCAAAGTTGAGCACACTGATGAGGTCAACATTGCTGATGATATTGTCAATGCCACCAATGCTATTGCTGGGGCAGGTAAGGGAATTTCTAAAACCCCATTGACTTTGTTGGTGAAAAAGGATGGTGTTCCTGATTTGACTATGGTTGATCTCCCTGGAATCACTAGAGTTCCTGTTCATGGTCAGCCTGAGGATATCTATGATCAAATCAAAGATATGATCATGGAGTATATCAAGCCTGAAGAGAGCATCATTCTCAATGTGTTGTCTGCTACTGTTGATTTTACAACTTGTGAATCCATTAGGATGTCACAGAGTGTGGATAGAGCTGGTGATAGGACCCTGGCTGTGGTCACAAAGGTTGATAAGGCGCCCGAAGGACTATTAGAGAAGGTTACAGCAGACGATGTTAGTATTGGTCTTGGTTATGTCTGTGTGAGGAACCGGATTGGAGATGAAACTTATGAGGAGGCAAGGGCAATATCTCAACAACTTTTTCAAACTCATCCTTTGCTGTCCAAGATTGAAAAATCTATGGTTGGAATTCCAGTTCTGGCTCAAAAGTTGGTGCAGATTCAAGCTTCTAGCATAGCTAGAAACTTGCCAGACATTGTCAAGAAGATAAATGACAAGCTGAGTTCTTGTCTTCTGGAGCTGAACAAAATGCCAAAGAAACTGTCATCTGTTGCTGAAGCCATGACTGCGTTTATGCAGATCATCGGATCATCAAAAGAATCTCTTAGGAAAATTCTGGTGAGAGGAGAATTTGATGAATTCCCTGATGACAAGCGCATGCATTGCACTGCTCGGCTTTATGAGATGCTCAGTCAGTACTCAGATCAACTTCACAAGTGTGAAGAAAGTGACCCAAAAAGTAACTTCTTAGTAGAGGAGATCAAGATTTTGGAGGAAGCAAAAGGTATTAATCTACCAAATTTTGTTCCCCGCAATGCTTTTCTTGTTATCTTGCAGGGAAAAGTGAAGGGAATTTCGAGCATACCTATTGGTTTTGTTGAGAAGGTTTGGAGTTATATTGAAGAAGTGGTTATGTCTTTGTTAATGCATAATACAGAAAACTATTATCAGCTTCAGGAATGCACCAGAAGAGCTGGCCGTAATCTTATAACAAGGATGAAAGAAAGGTCAGTTGAGTGGATGATGGAGATAGTGGAAATGGAGAAGCTGACTGATTATACATGTAATCCAGAATATGTATCCGAATGGAGCAGGCTGATGGGTCAACAAGACGCATTTGTACATACGGTGTTATCTAAAAATTACTCTACGATCTCTGTAGAGGGTATTGGGGAAGTTGAAGTTGGAGTCCTTCGGCAGTATAATCATGTTCTGTCTCAGGCTTTCGACTTGAAAATGAGGATGACTGCGTATTGGAAAGTTGTTCTGAGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTGAGTGTTTCGAAACTTGTGAACCAAGACATGGAGAGTGAGATTGTGAATGAGTTGATGGGACCAAATTGTGGTGGTGGGATTGAGAAAATGCTGGAGGAATCTCCAGCAGTTGCCATCAAGCGTGAGAAGCTGGTAAAGAGTATCAAAAAGCTTAGGGATTCCAAAGAGGTTGTTGCTAAGATCTTGGATGGCGTTGCTACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000428 GO:0001650 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003713 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005730 GO:0005911 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016070 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023051 GO:0030054 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044452 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0051059 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0055029 GO:0055044 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901796 GO:1902494 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 ko05016 ko05168 map03022 map05016 map05168
Pfam Domains
Protein Families
RST TAF4

Protein Analysis

666

Amino Acids

74.2

Weight (kDa)

5.5

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 65 - 239 4.3e-41 Dynamin family
Dynamin_M PF01031 247 - 529 4.7e-64 Dynamin central region
GED PF02212 570 - 659 5.1e-10 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 299, 1478
Acc36I ACCTGC 1 cut(s) 419
Acc65I GGTACC 1 cut(s) 289
AccB1I GGYRCC 2 cut(s) 289, 724
AccB7I CCANNNNNTGG 2 cut(s) 1825, 1865
AciI CCGC 1 cut(s) 1300
AclWI GGATC 2 cut(s) 58, 1084
AcoI YGGCCR 2 cut(s) 246, 1465
AcsI RAATTY 7 cut(s) 438, 897, 1101, 1118, 1127, 1288, 1341
AcuI CTGAAG 3 cut(s) 615, 1065, 1427
AcvI CACGTG 1 cut(s) 266
AcyI GRCGYC 2 cut(s) 135, 725
AdeI CACNNNGTG 1 cut(s) 671
AfaI GTAC 4 cut(s) 291, 350, 1187, 1611
AfiI CCNNNNNNNGG 4 cut(s) 533, 703, 1825, 1865
AflIII ACRYGT 1 cut(s) 1550
AgsI TTSAA 9 cut(s) 83, 239, 311, 854, 881, 932, 1391, 1670, 1723
AjnI CCWGG 4 cut(s) 243, 284, 508, 696
AjuI GAANNNNNNNTTGG 2 cut(s) 1656, 1688
AleI CACNNNNGTG 1 cut(s) 1206
AloI GAACNNNNNNTCC 4 cut(s) 321, 353, 888, 920
Alw21I GWGCWC 1 cut(s) 369
Alw26I GTCTC 1 cut(s) 1710
AlwI GGATC 2 cut(s) 58, 1084
AoxI GGCC 2 cut(s) 246, 1465
ApeKI GCWGC 2 cut(s) 8, 86
ApoI RAATTY 7 cut(s) 438, 897, 1101, 1118, 1127, 1288, 1341
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
AseI ATTAAT 1 cut(s) 1278
Asp700I GAANNNNTTC 1 cut(s) 177
Asp718I GGTACC 1 cut(s) 289
AspLEI GCGC 2 cut(s) 727, 1146
AspS9I GGNCC 2 cut(s) 693, 1856
AsuHPI GGTGA 5 cut(s) 56, 218, 478, 698, 1120
AsuII TTCGAA 1 cut(s) 1805
AvaII GGWCC 2 cut(s) 693, 1856
AxyI CCTNAGG 1 cut(s) 543
BaeI ACNNNNGTAYC 2 cut(s) 273, 306
BanI GGYRCC 2 cut(s) 289, 724
BbrPI CACGTG 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 992
Bbv12I GWGCWC 1 cut(s) 369
BbvI GCAGC 2 cut(s) 20, 98
BccI CCATC 7 cut(s) 83, 470, 1507, 1582, 1846, 1919, 1979
BceAI ACGGC 2 cut(s) 122, 1452
BciT130I CCWGG 4 cut(s) 245, 286, 510, 698
BciVI GTATCC 1 cut(s) 1579
BclI TGATCA 2 cut(s) 556, 573
BcoDI GTCTC 1 cut(s) 1710
BfaI CTAG 4 cut(s) 321, 519, 939, 948
BfmI CTRYAG 1 cut(s) 1647
BfoI RGCGCY 1 cut(s) 728
BfuAI ACCTGC 1 cut(s) 419
BfuI GTATCC 1 cut(s) 1579
BglII AGATCT 1 cut(s) 1977
BisI GCNGC 2 cut(s) 9, 87
BlsI GCNGC 2 cut(s) 10, 88
BmcAI AGTACT 1 cut(s) 1187
Bme1390I CCNGG 4 cut(s) 245, 286, 510, 698
Bme18I GGWCC 2 cut(s) 693, 1856
BmgT120I GGNCC 2 cut(s) 693, 1856
BmiI GGNNCC 6 cut(s) 155, 291, 695, 726, 797, 1857
BmrFI CCNGG 4 cut(s) 245, 286, 510, 698
BmsI GCATC 3 cut(s) 261, 612, 1164
BpiI GAAGAC 1 cut(s) 992
BpmI CTGGAG 3 cut(s) 1025, 1884, 1910
Bpu10I CCTNAGC 2 cut(s) 149, 1949
Bpu14I TTCGAA 1 cut(s) 1805
BsaAI YACGTR 1 cut(s) 266
BsaHI GRCGYC 2 cut(s) 135, 725
BsaJI CCNNGG 4 cut(s) 243, 285, 508, 696
BsaWI WCCGGW 1 cut(s) 798
Bsc4I CCNNNNNNNGG 4 cut(s) 533, 703, 1825, 1865
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 2 cut(s) 340, 902
Bse21I CCTNAGG 1 cut(s) 543
Bse3DI GCAATG 3 cut(s) 384, 1150, 1309
BseBI CCWGG 4 cut(s) 245, 286, 510, 698
BseDI CCNNGG 4 cut(s) 243, 285, 508, 696
BseGI GGATG 9 cut(s) 75, 101, 481, 666, 859, 1491, 1515, 1737, 1990
BseLI CCNNNNNNNGG 4 cut(s) 533, 703, 1825, 1865
BseMI GCAATG 3 cut(s) 384, 1150, 1309
BseMII CTCAG 7 cut(s) 163, 534, 980, 1192, 1203, 1721, 1748
BseNI ACTGG 2 cut(s) 340, 902
BseRI GAGGAG 3 cut(s) 836, 1128, 1259
BseXI GCAGC 2 cut(s) 20, 98
BseYI CCCAGC 1 cut(s) 422
BsgI GTGCAG 2 cut(s) 265, 944
BshFI GGCC 2 cut(s) 248, 1467
BshNI GGYRCC 2 cut(s) 289, 724
BsiHKAI GWGCWC 1 cut(s) 369
BsiSI CCGG 2 cut(s) 249, 799
BslFI GGGAC 1 cut(s) 1869
BslI CCNNNNNNNGG 4 cut(s) 533, 703, 1825, 1865
BsmAI GTCTC 1 cut(s) 1710
BsmFI GGGAC 1 cut(s) 1869
BsmI GAATGC 2 cut(s) 177, 1454
BsnI GGCC 2 cut(s) 248, 1467
Bsp119I TTCGAA 1 cut(s) 1805
Bsp1286I GDGCHC 1 cut(s) 369
Bsp1407I TGTACA 1 cut(s) 1609
BspACI CCGC 1 cut(s) 1300
BspANI GGCC 2 cut(s) 248, 1467
BspCNI CTCAG 7 cut(s) 162, 535, 981, 1191, 1202, 1720, 1749
BspLI GGNNCC 6 cut(s) 155, 291, 695, 726, 797, 1857
BspMI ACCTGC 1 cut(s) 419
BspPI GGATC 2 cut(s) 58, 1084
BspQI GCTCTTC 1 cut(s) 1453
BspT104I TTCGAA 1 cut(s) 1805
BspT107I GGYRCC 2 cut(s) 289, 724
BsrDI GCAATG 3 cut(s) 384, 1150, 1309
BsrFI RCCGGY 1 cut(s) 248
BsrGI TGTACA 1 cut(s) 1609
BsrI ACTGG 2 cut(s) 340, 902
BssAI RCCGGY 1 cut(s) 248
BssECI CCNNGG 4 cut(s) 243, 285, 508, 696
BssNI GRCGYC 2 cut(s) 135, 725
Bst2UI CCWGG 4 cut(s) 245, 286, 510, 698
Bst4CI ACNGT 3 cut(s) 631, 1032, 1618
Bst6I CTCTTC 2 cut(s) 591, 1453
BstACI GRCGYC 2 cut(s) 135, 725
BstAPI GCANNNNNTGC 1 cut(s) 1152
BstAUI TGTACA 1 cut(s) 1609
BstBAI YACGTR 1 cut(s) 266
BstBI TTCGAA 1 cut(s) 1805
BstC8I GCNNGC 6 cut(s) 31, 250, 260, 1148, 1465, 1583
BstEII GGTNACC 1 cut(s) 206
BstF5I GGATG 9 cut(s) 75, 101, 481, 666, 859, 1491, 1515, 1737, 1990
BstH2I RGCGCY 1 cut(s) 728
BstHHI GCGC 2 cut(s) 727, 1146
BstMAI GTCTC 1 cut(s) 1710
BstMWI GCNNNNNNNGC 5 cut(s) 228, 413, 1055, 1152, 1924
BstNI CCWGG 4 cut(s) 245, 286, 510, 698
BstNSI RCATGY 4 cut(s) 33, 74, 1150, 1554
BstPI GGTNACC 1 cut(s) 206
BstSCI CCNGG 4 cut(s) 243, 284, 508, 696
BstSFI CTRYAG 1 cut(s) 1647
BstV1I GCAGC 2 cut(s) 20, 98
BstV2I GAAGAC 1 cut(s) 992
BstX2I RGATCY 1 cut(s) 1977
BstXI CCANNNNNNTGG 1 cut(s) 218
BstYI RGATCY 1 cut(s) 1977
Bsu36I CCTNAGG 1 cut(s) 543
BsuI GTATCC 1 cut(s) 1579
BsuRI GGCC 2 cut(s) 248, 1467
BtsCI GGATG 9 cut(s) 75, 101, 481, 666, 859, 1491, 1515, 1737, 1990
BtsI GCAGTG 1 cut(s) 1155
BtsIMutI CAGTG 2 cut(s) 369, 1155
BveI ACCTGC 1 cut(s) 419
Cac8I GCNNGC 6 cut(s) 31, 250, 260, 1148, 1465, 1583
CfoI GCGC 2 cut(s) 727, 1146
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 2 cut(s) 693, 1856
CseI GACGC 3 cut(s) 143, 220, 1610
Csp6I GTAC 4 cut(s) 290, 349, 1186, 1610
CspCI CAANNNNNGTGG 2 cut(s) 178, 213
CviQI GTAC 4 cut(s) 290, 349, 1186, 1610
DinI GGCGCC 1 cut(s) 726
DraIII CACNNNGTG 1 cut(s) 671
EaeI YGGCCR 2 cut(s) 246, 1465
Eam1104I CTCTTC 2 cut(s) 591, 1453
EarI CTCTTC 2 cut(s) 591, 1453
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 2 cut(s) 693, 1856
Eco57I CTGAAG 3 cut(s) 615, 1065, 1427
Eco72I CACGTG 1 cut(s) 266
Eco81I CCTNAGG 1 cut(s) 543
Eco91I GGTNACC 1 cut(s) 206
EcoO109I RGGNCCY 1 cut(s) 693
EcoO65I GGTNACC 1 cut(s) 206
EcoRI GAATTC 2 cut(s) 897, 1127
EcoRII CCWGG 4 cut(s) 243, 284, 508, 696
EcoRV GATATC 1 cut(s) 550
EcoT22I ATGCAT 3 cut(s) 35, 1152, 1419
EgeI GGCGCC 1 cut(s) 726
EheI GGCGCC 1 cut(s) 726
FalI AAGNNNNNCTT 2 cut(s) 1077, 1109
FaqI GGGAC 1 cut(s) 1869
FauI CCCGC 1 cut(s) 1307
FbaI TGATCA 2 cut(s) 556, 573
Fnu4HI GCNGC 2 cut(s) 9, 87
FokI GGATG 9 cut(s) 62, 88, 488, 673, 846, 1498, 1522, 1744, 1997
Fsp4HI GCNGC 2 cut(s) 9, 87
FspBI CTAG 4 cut(s) 321, 519, 939, 948
GlaI GCGC 2 cut(s) 726, 1145
GluI GCNGC 2 cut(s) 9, 87
GsaI CCCAGC 1 cut(s) 426
GsuI CTGGAG 3 cut(s) 1025, 1884, 1910
HaeII RGCGCY 1 cut(s) 728
HaeIII GGCC 2 cut(s) 248, 1467
HapII CCGG 2 cut(s) 249, 799
HgaI GACGC 3 cut(s) 143, 220, 1610
HhaI GCGC 2 cut(s) 727, 1146
Hin1I GRCGYC 2 cut(s) 135, 725
Hin6I GCGC 2 cut(s) 725, 1144
HinP1I GCGC 2 cut(s) 725, 1144
HincII GTYRAC 3 cut(s) 142, 382, 1595
HindII GTYRAC 3 cut(s) 142, 382, 1595
HindIII AAGCTT 2 cut(s) 933, 1946
HinfI GANTC 8 cut(s) 239, 513, 650, 928, 1088, 1677, 1895, 1955
HpaII CCGG 2 cut(s) 249, 799
HphI GGTGA 5 cut(s) 56, 218, 478, 698, 1120
Hpy166II GTNNAC 5 cut(s) 142, 269, 382, 1595, 1816
Hpy188I TCNGA 5 cut(s) 40, 1076, 1192, 1573, 1758
Hpy188III TCNNGA 8 cut(s) 151, 326, 485, 970, 1004, 1252, 1445, 1559
Hpy8I GTNNAC 5 cut(s) 142, 269, 382, 1595, 1816
HpyAV CCTTC 9 cut(s) 35, 41, 167, 725, 739, 1330, 1366, 1691, 1755
HpyCH4III ACNGT 3 cut(s) 631, 1032, 1618
HpyCH4IV ACGT 1 cut(s) 265
HpyF10VI GCNNNNNNNGC 5 cut(s) 228, 413, 1055, 1152, 1924
HpySE526I ACGT 1 cut(s) 265
Hsp92I GRCGYC 2 cut(s) 135, 725
HspAI GCGC 2 cut(s) 725, 1144
KasI GGCGCC 1 cut(s) 724
KpnI GGTACC 1 cut(s) 293
KroI GCCGGC 1 cut(s) 248
KroNI GCCGGC 1 cut(s) 250
Ksp22I TGATCA 2 cut(s) 556, 573
LguI GCTCTTC 1 cut(s) 1453
LmnI GCTCC 5 cut(s) 5, 153, 189, 1006, 1578
Lsp1109I GCAGC 2 cut(s) 20, 98
LweI GCATC 3 cut(s) 261, 612, 1164
MaeI CTAG 4 cut(s) 321, 519, 939, 948
MaeII ACGT 1 cut(s) 265
MaeIII GTNAC 6 cut(s) 206, 663, 706, 748, 1217, 1229
MboII GAAGA 6 cut(s) 608, 985, 992, 1223, 1403, 1470
MflI RGATCY 1 cut(s) 1977
MhlI GDGCHC 1 cut(s) 369
MluCI AATT 9 cut(s) 438, 897, 1101, 1118, 1127, 1288, 1341, 1630, 1861
Mly113I GGCGCC 1 cut(s) 725
MlyI GAGTC 1 cut(s) 1686
MmeI TCCRAC 3 cut(s) 324, 874, 1654
Mph1103I ATGCAT 3 cut(s) 35, 1152, 1419
MroNI GCCGGC 1 cut(s) 248
MroXI GAANNNNTTC 1 cut(s) 177
MseI TTAA 2 cut(s) 1278, 1412
MslI CAYNNNNRTG 4 cut(s) 164, 372, 659, 1206
MspI CCGG 2 cut(s) 249, 799
MspR9I CCNGG 4 cut(s) 245, 286, 510, 698
Mva1269I GAATGC 2 cut(s) 177, 1454
MvaI CCWGG 4 cut(s) 245, 286, 510, 698
MwoI GCNNNNNNNGC 5 cut(s) 228, 413, 1055, 1152, 1924
NaeI GCCGGC 1 cut(s) 250
NarI GGCGCC 1 cut(s) 725
NgoMIV GCCGGC 1 cut(s) 248
NlaIV GGNNCC 6 cut(s) 155, 291, 695, 726, 797, 1857
NmeAIII GCCGAG 1 cut(s) 1141
NmuCI GTSAC 4 cut(s) 206, 663, 706, 1217
NsiI ATGCAT 3 cut(s) 35, 1152, 1419
NspI RCATGY 4 cut(s) 33, 74, 1150, 1554
NspV TTCGAA 1 cut(s) 1805
OliI CACNNNNGTG 1 cut(s) 1206
PaeI GCATGC 2 cut(s) 33, 1150
PciI ACATGT 1 cut(s) 1550
PciSI GCTCTTC 1 cut(s) 1453
PctI GAATGC 2 cut(s) 177, 1454
PdiI GCCGGC 1 cut(s) 250
PdmI GAANNNNTTC 1 cut(s) 177
PfeI GAWTC 7 cut(s) 239, 513, 650, 928, 1088, 1895, 1955
PflFI GACNNNGTC 1 cut(s) 965
PflMI CCANNNNNTGG 2 cut(s) 1825, 1865
PkrI GCNGC 2 cut(s) 10, 88
PleI GAGTC 1 cut(s) 1685
PluTI GGCGCC 1 cut(s) 728
PmaCI CACGTG 1 cut(s) 266
PmlI CACGTG 1 cut(s) 266
PpsI GAGTC 1 cut(s) 1685
Ppu21I YACGTR 1 cut(s) 266
PpuMI RGGWCCY 1 cut(s) 693
PscI ACATGT 1 cut(s) 1550
PshBI ATTAAT 1 cut(s) 1278
PsiI TTATAA 2 cut(s) 299, 1478
Psp5II RGGWCCY 1 cut(s) 693
Psp6I CCWGG 4 cut(s) 243, 284, 508, 696
PspCI CACGTG 1 cut(s) 266
PspEI GGTNACC 1 cut(s) 206
PspFI CCCAGC 1 cut(s) 422
PspGI CCWGG 4 cut(s) 243, 284, 508, 696
PspN4I GGNNCC 6 cut(s) 155, 291, 695, 726, 797, 1857
PspPI GGNCC 2 cut(s) 693, 1856
PspPPI RGGWCCY 1 cut(s) 693
PsuI RGATCY 1 cut(s) 1977
PsyI GACNNNGTC 1 cut(s) 965
RsaI GTAC 4 cut(s) 291, 350, 1187, 1611
RsaNI GTAC 4 cut(s) 290, 349, 1186, 1610
RseI CAYNNNNRTG 4 cut(s) 164, 372, 659, 1206
SapI GCTCTTC 1 cut(s) 1453
SaqAI TTAA 2 cut(s) 1278, 1412
SatI GCNGC 2 cut(s) 9, 87
Sau96I GGNCC 2 cut(s) 693, 1856
ScaI AGTACT 1 cut(s) 1187
SchI GAGTC 1 cut(s) 1686
ScrFI CCNGG 4 cut(s) 245, 286, 510, 698
SduI GDGCHC 1 cut(s) 369
SfaNI GCATC 3 cut(s) 261, 612, 1164
SfcI CTRYAG 1 cut(s) 1647
SfoI GGCGCC 1 cut(s) 726
SfuI TTCGAA 1 cut(s) 1805
SinI GGWCC 2 cut(s) 693, 1856
SmiMI CAYNNNNRTG 4 cut(s) 164, 372, 659, 1206
SphI GCATGC 2 cut(s) 33, 1150
Sse9I AATT 9 cut(s) 438, 897, 1101, 1118, 1127, 1288, 1341, 1630, 1861
SsiI CCGC 1 cut(s) 1300
SspDI GGCGCC 1 cut(s) 724
SspMI CTAG 4 cut(s) 321, 519, 939, 948
StyD4I CCNGG 4 cut(s) 243, 284, 508, 696
TaaI ACNGT 3 cut(s) 631, 1032, 1618
TaiI ACGT 1 cut(s) 268
TaqI TCGA 3 cut(s) 1346, 1716, 1805
TasI AATT 9 cut(s) 438, 897, 1101, 1118, 1127, 1288, 1341, 1630, 1861
TatI WGTACW 3 cut(s) 348, 1185, 1609
TfiI GAWTC 7 cut(s) 239, 513, 650, 928, 1088, 1895, 1955
Tru1I TTAA 2 cut(s) 1278, 1412
Tru9I TTAA 2 cut(s) 1278, 1412
TscAI CASTG 2 cut(s) 376, 1162
TseFI GTSAC 4 cut(s) 206, 663, 706, 1217
TseI GCWGC 2 cut(s) 8, 86
Tsp45I GTSAC 4 cut(s) 206, 663, 706, 1217
TspDTI ATGAA 4 cut(s) 521, 825, 1140, 1502
TspGWI ACGGA 1 cut(s) 110
TspRI CASTG 2 cut(s) 376, 1162
Tth111I GACNNNGTC 1 cut(s) 965
Van91I CCANNNNNTGG 2 cut(s) 1825, 1865
VpaK11BI GGWCC 2 cut(s) 693, 1856
VspI ATTAAT 1 cut(s) 1278
XapI RAATTY 7 cut(s) 438, 897, 1101, 1118, 1127, 1288, 1341
XceI RCATGY 4 cut(s) 33, 74, 1150, 1554
XmnI GAANNNNTTC 1 cut(s) 177
XspI CTAG 4 cut(s) 321, 519, 939, 948
ZrmI AGTACT 1 cut(s) 1187
Zsp2I ATGCAT 3 cut(s) 35, 1152, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.