Polygalacturonase-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 266 |
| AciI | CCGC | 7 cut(s) | 51, 171, 208, 225, 256, 702, 1142 |
| AclI | AACGTT | 1 cut(s) | 888 |
| AclWI | GGATC | 3 cut(s) | 420, 433, 824 |
| AcoI | YGGCCR | 2 cut(s) | 57, 946 |
| AcsI | RAATTY | 2 cut(s) | 360, 1025 |
| AfaI | GTAC | 3 cut(s) | 1000, 1046, 1147 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 291, 315, 713, 831, 949 |
| AgeI | ACCGGT | 1 cut(s) | 638 |
| AgsI | TTSAA | 4 cut(s) | 596, 689, 893, 1041 |
| AjnI | CCWGG | 5 cut(s) | 664, 824, 851, 943, 948 |
| AluBI | AGCT | 5 cut(s) | 152, 755, 1081, 1106, 1112 |
| AluI | AGCT | 5 cut(s) | 152, 755, 1081, 1106, 1112 |
| Alw21I | GWGCWC | 1 cut(s) | 1108 |
| AlwI | GGATC | 3 cut(s) | 420, 433, 824 |
| AoxI | GGCC | 3 cut(s) | 57, 126, 946 |
| ApeKI | GCWGC | 2 cut(s) | 939, 1153 |
| ApoI | RAATTY | 2 cut(s) | 360, 1025 |
| AsiGI | ACCGGT | 1 cut(s) | 638 |
| AspS9I | GGNCC | 3 cut(s) | 227, 662, 704 |
| AsuC2I | CCSGG | 2 cut(s) | 293, 708 |
| AsuHPI | GGTGA | 3 cut(s) | 175, 241, 653 |
| AsuNHI | GCTAGC | 1 cut(s) | 836 |
| AvaII | GGWCC | 3 cut(s) | 227, 662, 704 |
| AxyI | CCTNAGG | 1 cut(s) | 88 |
| BalI | TGGCCA | 2 cut(s) | 59, 948 |
| BamHI | GGATCC | 1 cut(s) | 425 |
| BanI | GGYRCC | 1 cut(s) | 266 |
| BanII | GRGCYC | 1 cut(s) | 1108 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1070, 1102 |
| Bbv12I | GWGCWC | 1 cut(s) | 1108 |
| BbvI | GCAGC | 2 cut(s) | 926, 1165 |
| BccI | CCATC | 1 cut(s) | 98 |
| BciT130I | CCWGG | 5 cut(s) | 666, 826, 853, 945, 950 |
| BciVI | GTATCC | 1 cut(s) | 596 |
| BcnI | CCSGG | 2 cut(s) | 293, 708 |
| BfaI | CTAG | 3 cut(s) | 734, 837, 1109 |
| BfmI | CTRYAG | 2 cut(s) | 746, 1169 |
| BfuI | GTATCC | 1 cut(s) | 596 |
| BglII | AGATCT | 1 cut(s) | 630 |
| BisI | GCNGC | 2 cut(s) | 940, 1154 |
| BlsI | GCNGC | 2 cut(s) | 941, 1155 |
| Bme1390I | CCNGG | 7 cut(s) | 293, 666, 708, 826, 853, 945, 950 |
| Bme18I | GGWCC | 3 cut(s) | 227, 662, 704 |
| BmgT120I | GGNCC | 3 cut(s) | 227, 662, 704 |
| BmiI | GGNNCC | 4 cut(s) | 94, 268, 320, 427 |
| BmrFI | CCNGG | 7 cut(s) | 293, 666, 708, 826, 853, 945, 950 |
| BmtI | GCTAGC | 1 cut(s) | 840 |
| BpmI | CTGGAG | 1 cut(s) | 978 |
| BpuMI | CCSGG | 2 cut(s) | 293, 708 |
| Bsa29I | ATCGAT | 1 cut(s) | 909 |
| BsaAI | YACGTR | 1 cut(s) | 184 |
| BsaBI | GATNNNNATC | 1 cut(s) | 478 |
| BsaJI | CCNNGG | 6 cut(s) | 54, 60, 159, 825, 943, 1099 |
| BsaWI | WCCGGW | 3 cut(s) | 353, 422, 638 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 291, 315, 713, 831, 949 |
| Bse118I | RCCGGY | 3 cut(s) | 187, 308, 638 |
| Bse1I | ACTGG | 3 cut(s) | 320, 385, 847 |
| Bse21I | CCTNAGG | 1 cut(s) | 88 |
| Bse3DI | GCAATG | 3 cut(s) | 217, 258, 1129 |
| Bse8I | GATNNNNATC | 1 cut(s) | 478 |
| BseBI | CCWGG | 5 cut(s) | 666, 826, 853, 945, 950 |
| BseCI | ATCGAT | 1 cut(s) | 909 |
| BseDI | CCNNGG | 6 cut(s) | 54, 60, 159, 825, 943, 1099 |
| BseJI | GATNNNNATC | 1 cut(s) | 478 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 291, 315, 713, 831, 949 |
| BseMI | GCAATG | 3 cut(s) | 217, 258, 1129 |
| BseNI | ACTGG | 3 cut(s) | 320, 385, 847 |
| BseRI | GAGGAG | 2 cut(s) | 311, 1116 |
| BseXI | GCAGC | 2 cut(s) | 926, 1165 |
| BsgI | GTGCAG | 1 cut(s) | 1172 |
| BshFI | GGCC | 3 cut(s) | 59, 128, 948 |
| BshNI | GGYRCC | 1 cut(s) | 266 |
| BshTI | ACCGGT | 1 cut(s) | 638 |
| BshVI | ATCGAT | 1 cut(s) | 909 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1108 |
| BsiSI | CCGG | 9 cut(s) | 188, 292, 309, 354, 405, 423, 561, 639, 707 |
| BslFI | GGGAC | 1 cut(s) | 909 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 291, 315, 713, 831, 949 |
| BsmFI | GGGAC | 1 cut(s) | 909 |
| BsnI | GGCC | 3 cut(s) | 59, 128, 948 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1108 |
| Bsp143I | GATC | 4 cut(s) | 425, 630, 816, 910 |
| Bsp19I | CCATGG | 1 cut(s) | 54 |
| BspACI | CCGC | 7 cut(s) | 51, 171, 208, 225, 256, 702, 1142 |
| BspANI | GGCC | 3 cut(s) | 59, 128, 948 |
| BspDI | ATCGAT | 1 cut(s) | 909 |
| BspHI | TCATGA | 1 cut(s) | 879 |
| BspLI | GGNNCC | 4 cut(s) | 94, 268, 320, 427 |
| BspOI | GCTAGC | 1 cut(s) | 840 |
| BspPI | GGATC | 3 cut(s) | 420, 433, 824 |
| BspT107I | GGYRCC | 1 cut(s) | 266 |
| BsrDI | GCAATG | 3 cut(s) | 217, 258, 1129 |
| BsrFI | RCCGGY | 3 cut(s) | 187, 308, 638 |
| BsrI | ACTGG | 3 cut(s) | 320, 385, 847 |
| BssAI | RCCGGY | 3 cut(s) | 187, 308, 638 |
| BssECI | CCNNGG | 6 cut(s) | 54, 60, 159, 825, 943, 1099 |
| BssMI | GATC | 4 cut(s) | 425, 630, 816, 910 |
| BssT1I | CCWWGG | 2 cut(s) | 54, 60 |
| Bst2UI | CCWGG | 5 cut(s) | 666, 826, 853, 945, 950 |
| Bst4CI | ACNGT | 7 cut(s) | 341, 371, 518, 584, 775, 784, 1150 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 414 |
| BstBAI | YACGTR | 1 cut(s) | 184 |
| BstC8I | GCNNGC | 5 cut(s) | 189, 265, 394, 700, 838 |
| BstDEI | CTNAG | 2 cut(s) | 88, 123 |
| BstDSI | CCRYGG | 1 cut(s) | 54 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 829 |
| BstKTI | GATC | 4 cut(s) | 428, 633, 819, 913 |
| BstMBI | GATC | 4 cut(s) | 425, 630, 816, 910 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 231, 240, 264, 414, 945 |
| BstNI | CCWGG | 5 cut(s) | 666, 826, 853, 945, 950 |
| BstNSI | RCATGY | 2 cut(s) | 702, 875 |
| BstSCI | CCNGG | 7 cut(s) | 291, 664, 706, 824, 851, 943, 948 |
| BstSFI | CTRYAG | 2 cut(s) | 746, 1169 |
| BstV1I | GCAGC | 2 cut(s) | 926, 1165 |
| BstX2I | RGATCY | 2 cut(s) | 425, 630 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 956 |
| BstYI | RGATCY | 2 cut(s) | 425, 630 |
| Bsu15I | ATCGAT | 1 cut(s) | 909 |
| Bsu36I | CCTNAGG | 1 cut(s) | 88 |
| BsuI | GTATCC | 1 cut(s) | 596 |
| BsuRI | GGCC | 3 cut(s) | 59, 128, 948 |
| BsuTUI | ATCGAT | 1 cut(s) | 909 |
| BtgI | CCRYGG | 1 cut(s) | 54 |
| BtsI | GCAGTG | 1 cut(s) | 1026 |
| BtsIMutI | CAGTG | 5 cut(s) | 378, 789, 840, 976, 1026 |
| Cac8I | GCNNGC | 5 cut(s) | 189, 265, 394, 700, 838 |
| CciI | TCATGA | 1 cut(s) | 879 |
| Cfr10I | RCCGGY | 3 cut(s) | 187, 308, 638 |
| Cfr13I | GGNCC | 3 cut(s) | 227, 662, 704 |
| ClaI | ATCGAT | 1 cut(s) | 909 |
| CpoI | CGGWCCG | 1 cut(s) | 704 |
| Csp6I | GTAC | 3 cut(s) | 999, 1045, 1146 |
| CspAI | ACCGGT | 1 cut(s) | 638 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1111, 1146 |
| CspI | CGGWCCG | 1 cut(s) | 704 |
| CviQI | GTAC | 3 cut(s) | 999, 1045, 1146 |
| DdeI | CTNAG | 2 cut(s) | 88, 123 |
| DpnI | GATC | 4 cut(s) | 427, 632, 818, 912 |
| DpnII | GATC | 4 cut(s) | 425, 630, 816, 910 |
| EaeI | YGGCCR | 2 cut(s) | 57, 946 |
| EciI | GGCGGA | 1 cut(s) | 40 |
| Ecl136II | GAGCTC | 1 cut(s) | 1106 |
| Eco130I | CCWWGG | 2 cut(s) | 54, 60 |
| Eco147I | AGGCCT | 1 cut(s) | 128 |
| Eco24I | GRGCYC | 1 cut(s) | 1108 |
| Eco47I | GGWCC | 3 cut(s) | 227, 662, 704 |
| Eco53kI | GAGCTC | 1 cut(s) | 1106 |
| Eco81I | CCTNAGG | 1 cut(s) | 88 |
| EcoICRI | GAGCTC | 1 cut(s) | 1106 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 829 |
| EcoRI | GAATTC | 1 cut(s) | 360 |
| EcoRII | CCWGG | 5 cut(s) | 664, 824, 851, 943, 948 |
| EcoT14I | CCWWGG | 2 cut(s) | 54, 60 |
| EcoT38I | GRGCYC | 1 cut(s) | 1108 |
| ErhI | CCWWGG | 2 cut(s) | 54, 60 |
| FaqI | GGGAC | 1 cut(s) | 909 |
| FauI | CCCGC | 2 cut(s) | 178, 1135 |
| Fnu4HI | GCNGC | 2 cut(s) | 940, 1154 |
| FriOI | GRGCYC | 1 cut(s) | 1108 |
| Fsp4HI | GCNGC | 2 cut(s) | 940, 1154 |
| FspBI | CTAG | 3 cut(s) | 734, 837, 1109 |
| GluI | GCNGC | 2 cut(s) | 940, 1154 |
| GsuI | CTGGAG | 1 cut(s) | 978 |
| HaeIII | GGCC | 3 cut(s) | 59, 128, 948 |
| HapII | CCGG | 9 cut(s) | 188, 292, 309, 354, 405, 423, 561, 639, 707 |
| HincII | GTYRAC | 1 cut(s) | 337 |
| HindII | GTYRAC | 1 cut(s) | 337 |
| HindIII | AAGCTT | 1 cut(s) | 150 |
| HinfI | GANTC | 3 cut(s) | 116, 730, 1059 |
| HpaII | CCGG | 9 cut(s) | 188, 292, 309, 354, 405, 423, 561, 639, 707 |
| HphI | GGTGA | 3 cut(s) | 175, 241, 653 |
| Hpy166II | GTNNAC | 1 cut(s) | 337 |
| Hpy188I | TCNGA | 2 cut(s) | 286, 1064 |
| Hpy188III | TCNNGA | 5 cut(s) | 365, 880, 926, 957, 986 |
| Hpy8I | GTNNAC | 1 cut(s) | 337 |
| Hpy99I | CGWCG | 2 cut(s) | 584, 607 |
| HpyAV | CCTTC | 2 cut(s) | 139, 262 |
| HpyCH4III | ACNGT | 7 cut(s) | 341, 371, 518, 584, 775, 784, 1150 |
| HpyCH4IV | ACGT | 2 cut(s) | 183, 888 |
| HpyCH4V | TGCA | 9 cut(s) | 140, 234, 396, 522, 538, 698, 763, 1019, 1153 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 231, 240, 264, 414, 945 |
| HpyF3I | CTNAG | 2 cut(s) | 88, 123 |
| HpySE526I | ACGT | 2 cut(s) | 183, 888 |
| KroI | GCCGGC | 1 cut(s) | 187 |
| KroNI | GCCGGC | 1 cut(s) | 189 |
| Kzo9I | GATC | 4 cut(s) | 425, 630, 816, 910 |
| LmnI | GCTCC | 5 cut(s) | 92, 210, 283, 324, 1103 |
| Lsp1109I | GCAGC | 2 cut(s) | 926, 1165 |
| MaeI | CTAG | 3 cut(s) | 734, 837, 1109 |
| MaeII | ACGT | 2 cut(s) | 183, 888 |
| MaeIII | GTNAC | 9 cut(s) | 67, 79, 311, 343, 610, 710, 769, 784, 976 |
| MalI | GATC | 4 cut(s) | 427, 632, 818, 912 |
| MboI | GATC | 4 cut(s) | 425, 630, 816, 910 |
| MfeI | CAATTG | 1 cut(s) | 657 |
| MflI | RGATCY | 2 cut(s) | 425, 630 |
| MhlI | GDGCHC | 1 cut(s) | 1108 |
| MlsI | TGGCCA | 2 cut(s) | 59, 948 |
| MluCI | AATT | 4 cut(s) | 360, 657, 717, 1025 |
| MluNI | TGGCCA | 2 cut(s) | 59, 948 |
| MlyI | GAGTC | 2 cut(s) | 110, 739 |
| MmeI | TCCRAC | 3 cut(s) | 471, 477, 892 |
| MnlI | CCTC | 9 cut(s) | 169, 189, 254, 281, 332, 568, 807, 825, 1094 |
| Mox20I | TGGCCA | 2 cut(s) | 59, 948 |
| MroNI | GCCGGC | 1 cut(s) | 187 |
| MscI | TGGCCA | 2 cut(s) | 59, 948 |
| MseI | TTAA | 4 cut(s) | 531, 546, 885, 963 |
| Msp20I | TGGCCA | 2 cut(s) | 59, 948 |
| MspA1I | CMGCKG | 2 cut(s) | 173, 225 |
| MspI | CCGG | 9 cut(s) | 188, 292, 309, 354, 405, 423, 561, 639, 707 |
| MspR9I | CCNGG | 7 cut(s) | 293, 666, 708, 826, 853, 945, 950 |
| MunI | CAATTG | 1 cut(s) | 657 |
| MvaI | CCWGG | 5 cut(s) | 666, 826, 853, 945, 950 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 231, 240, 264, 414, 945 |
| NaeI | GCCGGC | 1 cut(s) | 189 |
| NciI | CCSGG | 2 cut(s) | 293, 708 |
| NcoI | CCATGG | 1 cut(s) | 54 |
| NdeII | GATC | 4 cut(s) | 425, 630, 816, 910 |
| NgoMIV | GCCGGC | 1 cut(s) | 187 |
| NheI | GCTAGC | 1 cut(s) | 836 |
| NlaIV | GGNNCC | 4 cut(s) | 94, 268, 320, 427 |
| NmuCI | GTSAC | 5 cut(s) | 67, 79, 710, 784, 976 |
| NspI | RCATGY | 2 cut(s) | 702, 875 |
| PaeI | GCATGC | 1 cut(s) | 702 |
| PagI | TCATGA | 1 cut(s) | 879 |
| PceI | AGGCCT | 1 cut(s) | 128 |
| PdiI | GCCGGC | 1 cut(s) | 189 |
| PfeI | GAWTC | 1 cut(s) | 1059 |
| PflFI | GACNNNGTC | 1 cut(s) | 708 |
| PinAI | ACCGGT | 1 cut(s) | 638 |
| PkrI | GCNGC | 2 cut(s) | 941, 1155 |
| PleI | GAGTC | 2 cut(s) | 110, 738 |
| PpsI | GAGTC | 2 cut(s) | 110, 738 |
| Ppu21I | YACGTR | 1 cut(s) | 184 |
| Psp124BI | GAGCTC | 1 cut(s) | 1108 |
| Psp1406I | AACGTT | 1 cut(s) | 888 |
| Psp6I | CCWGG | 5 cut(s) | 664, 824, 851, 943, 948 |
| PspGI | CCWGG | 5 cut(s) | 664, 824, 851, 943, 948 |
| PspN4I | GGNNCC | 4 cut(s) | 94, 268, 320, 427 |
| PspPI | GGNCC | 3 cut(s) | 227, 662, 704 |
| PsuI | RGATCY | 2 cut(s) | 425, 630 |
| PsyI | GACNNNGTC | 1 cut(s) | 708 |
| RsaI | GTAC | 3 cut(s) | 1000, 1046, 1147 |
| RsaNI | GTAC | 3 cut(s) | 999, 1045, 1146 |
| Rsr2I | CGGWCCG | 1 cut(s) | 704 |
| RsrII | CGGWCCG | 1 cut(s) | 704 |
| SacI | GAGCTC | 1 cut(s) | 1108 |
| SaqAI | TTAA | 4 cut(s) | 531, 546, 885, 963 |
| SatI | GCNGC | 2 cut(s) | 940, 1154 |
| Sau3AI | GATC | 4 cut(s) | 425, 630, 816, 910 |
| Sau96I | GGNCC | 3 cut(s) | 227, 662, 704 |
| SchI | GAGTC | 2 cut(s) | 110, 739 |
| ScrFI | CCNGG | 7 cut(s) | 293, 666, 708, 826, 853, 945, 950 |
| SduI | GDGCHC | 1 cut(s) | 1108 |
| SfcI | CTRYAG | 2 cut(s) | 746, 1169 |
| SinI | GGWCC | 3 cut(s) | 227, 662, 704 |
| SphI | GCATGC | 1 cut(s) | 702 |
| Sse9I | AATT | 4 cut(s) | 360, 657, 717, 1025 |
| SseBI | AGGCCT | 1 cut(s) | 128 |
| SsiI | CCGC | 7 cut(s) | 51, 171, 208, 225, 256, 702, 1142 |
| SspI | AATATT | 2 cut(s) | 460, 920 |
| SspMI | CTAG | 3 cut(s) | 734, 837, 1109 |
| SstI | GAGCTC | 1 cut(s) | 1108 |
| StuI | AGGCCT | 1 cut(s) | 128 |
| StyD4I | CCNGG | 7 cut(s) | 291, 664, 706, 824, 851, 943, 948 |
| StyI | CCWWGG | 2 cut(s) | 54, 60 |
| TaaI | ACNGT | 7 cut(s) | 341, 371, 518, 584, 775, 784, 1150 |
| TaiI | ACGT | 2 cut(s) | 186, 891 |
| TaqI | TCGA | 1 cut(s) | 909 |
| TaqII | GACCGA | 1 cut(s) | 128 |
| TasI | AATT | 4 cut(s) | 360, 657, 717, 1025 |
| TfiI | GAWTC | 1 cut(s) | 1059 |
| Tru1I | TTAA | 4 cut(s) | 531, 546, 885, 963 |
| Tru9I | TTAA | 4 cut(s) | 531, 546, 885, 963 |
| TscAI | CASTG | 5 cut(s) | 385, 789, 847, 976, 1026 |
| TseFI | GTSAC | 5 cut(s) | 67, 79, 710, 784, 976 |
| TseI | GCWGC | 2 cut(s) | 939, 1153 |
| Tsp45I | GTSAC | 5 cut(s) | 67, 79, 710, 784, 976 |
| TspDTI | ATGAA | 3 cut(s) | 31, 983, 1104 |
| TspGWI | ACGGA | 2 cut(s) | 270, 729 |
| TspRI | CASTG | 5 cut(s) | 385, 789, 847, 976, 1026 |
| Tth111I | GACNNNGTC | 1 cut(s) | 708 |
| VpaK11BI | GGWCC | 3 cut(s) | 227, 662, 704 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 829 |
| XapI | RAATTY | 2 cut(s) | 360, 1025 |
| XceI | RCATGY | 2 cut(s) | 702, 875 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 460 |
| XspI | CTAG | 3 cut(s) | 734, 837, 1109 |