RNA polymerase III
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097261 RchiOBHm_Chr4g0388121 RchiOBHm_Chr6g0254981 RchiOBHm_Chr6g0270571 |
| rosa_laevigata | RLG00000013625 RLG00000016400 RLG00000027818 RLG00000028940 RLG00000033711 RLG00000035539 RLG00000035931 |
| rosa_multiflora | Rmu_sc0000322.1_g000027 |
| rosa_roxburghii | Rroxscaffold_1G00026630 Rroxscaffold_5G00347830 |
| rosa_rugosa | Rorug02G0295700 Rorug03G0217900 Rorug04G0030800 Rorug04G0257000 Rorug05G0516900 Rorug06G0100200 Rorug06G0468100 |
| rosa_samantha | Rh1AG155900 Rh1AG219700 Rh1DG187200 Rh2BG424900 Rh4AG076000 Rh4BG015100 Rh4DG099500 Rh7CG342400 Rh7DG317900 Rh7DG373200 |
| rosa_wichuraiana | Rw3G022170 Rw7G027100 Rw7G027110 Rw7G031460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 138 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 139 |
| AjnI | CCWGG | 1 cut(s) | 132 |
| AluBI | AGCT | 4 cut(s) | 80, 104, 152, 217 |
| AluI | AGCT | 4 cut(s) | 80, 104, 152, 217 |
| AsuHPI | GGTGA | 1 cut(s) | 49 |
| BciT130I | CCWGG | 1 cut(s) | 134 |
| BfaI | CTAG | 1 cut(s) | 153 |
| Bme1390I | CCNGG | 1 cut(s) | 134 |
| BmrFI | CCNGG | 1 cut(s) | 134 |
| BpmI | CTGGAG | 1 cut(s) | 155 |
| BpuEI | CTTGAG | 1 cut(s) | 234 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 161, 191 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 139 |
| BseBI | CCWGG | 1 cut(s) | 134 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BseMII | CTCAG | 1 cut(s) | 196 |
| BseRI | GAGGAG | 2 cut(s) | 100, 152 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BspCNI | CTCAG | 1 cut(s) | 195 |
| BspQI | GCTCTTC | 1 cut(s) | 138 |
| Bst2UI | CCWGG | 1 cut(s) | 134 |
| Bst6I | CTCTTC | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 2 cut(s) | 106, 150 |
| BstDEI | CTNAG | 1 cut(s) | 182 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 137 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 158 |
| BstNI | CCWGG | 1 cut(s) | 134 |
| BstSCI | CCNGG | 1 cut(s) | 132 |
| Cac8I | GCNNGC | 2 cut(s) | 106, 150 |
| CviAII | CATG | 2 cut(s) | 158, 194 |
| CviJI | RGCY | 6 cut(s) | 80, 104, 116, 152, 217, 243 |
| CviKI_1 | RGCY | 6 cut(s) | 80, 104, 116, 152, 217, 243 |
| DdeI | CTNAG | 1 cut(s) | 182 |
| Eam1104I | CTCTTC | 1 cut(s) | 138 |
| EarI | CTCTTC | 1 cut(s) | 138 |
| Eco32I | GATATC | 1 cut(s) | 75 |
| Eco57I | CTGAAG | 1 cut(s) | 138 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 137 |
| EcoRII | CCWGG | 1 cut(s) | 132 |
| EcoRV | GATATC | 1 cut(s) | 75 |
| FaeI | CATG | 2 cut(s) | 161, 197 |
| FaiI | YATR | 7 cut(s) | 6, 21, 23, 32, 95, 159, 195 |
| FatI | CATG | 2 cut(s) | 157, 193 |
| FspBI | CTAG | 1 cut(s) | 153 |
| GsuI | CTGGAG | 1 cut(s) | 155 |
| Hin1II | CATG | 2 cut(s) | 161, 197 |
| HindIII | AAGCTT | 1 cut(s) | 102 |
| HphI | GGTGA | 1 cut(s) | 49 |
| Hpy188I | TCNGA | 1 cut(s) | 185 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 158 |
| HpyF3I | CTNAG | 1 cut(s) | 182 |
| Hsp92II | CATG | 2 cut(s) | 161, 197 |
| LguI | GCTCTTC | 1 cut(s) | 138 |
| LpnPI | CCDG | 3 cut(s) | 54, 119, 146 |
| MaeI | CTAG | 1 cut(s) | 153 |
| MboII | GAAGA | 2 cut(s) | 52, 155 |
| MluCI | AATT | 1 cut(s) | 16 |
| MnlI | CCTC | 7 cut(s) | 78, 81, 130, 133, 165, 201, 233 |
| MseI | TTAA | 2 cut(s) | 15, 123 |
| MslI | CAYNNNNRTG | 1 cut(s) | 192 |
| MspA1I | CMGCKG | 1 cut(s) | 80 |
| MspR9I | CCNGG | 1 cut(s) | 134 |
| MvaI | CCWGG | 1 cut(s) | 134 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 158 |
| NlaIII | CATG | 2 cut(s) | 161, 197 |
| PciSI | GCTCTTC | 1 cut(s) | 138 |
| Psp6I | CCWGG | 1 cut(s) | 132 |
| PspGI | CCWGG | 1 cut(s) | 132 |
| PvuII | CAGCTG | 1 cut(s) | 80 |
| RseI | CAYNNNNRTG | 1 cut(s) | 192 |
| SapI | GCTCTTC | 1 cut(s) | 138 |
| SaqAI | TTAA | 2 cut(s) | 15, 123 |
| ScrFI | CCNGG | 1 cut(s) | 134 |
| SetI | ASST | 7 cut(s) | 82, 92, 106, 135, 154, 219, 238 |
| SgeI | CNNG | 9 cut(s) | 81, 117, 140, 145, 146, 161, 165, 170, 206 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 192 |
| SmlI | CTYRAG | 1 cut(s) | 249 |
| SmoI | CTYRAG | 1 cut(s) | 249 |
| Sse9I | AATT | 1 cut(s) | 16 |
| SspMI | CTAG | 1 cut(s) | 153 |
| StyD4I | CCNGG | 1 cut(s) | 132 |
| TasI | AATT | 1 cut(s) | 16 |
| Tru1I | TTAA | 2 cut(s) | 15, 123 |
| Tru9I | TTAA | 2 cut(s) | 15, 123 |
| TspDTI | ATGAA | 2 cut(s) | 82, 210 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 137 |
| XspI | CTAG | 1 cut(s) | 153 |