RLG00000028940

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
30394513 .. 30398316
3804 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028940

Sequence Viewer

Length: 438 bp
ATGGCTGCCTTGAAGGCATCAACATTGGAAGCAAATAGGTTAGCTCCAAAAGCATCAAGGCCTCAACAAGCTGCAGCATTTGCTAAGCAAACTTCGAGGCCTGTTCAAGCTGCATCTGCCCAGAAAACTTCAAGGCCTCAACAAGCTGCATCTGCCCCAGCAGCTGTTTCCAGAATATGTGTTGGTACATGGAATGTTGGAGGACAGACTCCACCCGATGACCTAGATATTGATGGTTGGCTAGATATCAATGACCCAGCCGACATCTATGCAATTGGTGTTGAAGACAAAGCTGATGAAGTTTCATTAGCACTTATAGGGTATTGTGAAGGAGGGGAGCCATTTAAGACTGCTTCTTGGTTGCTTCTTAGTGAGGTAGTGGTGGATTTCAAGAATGTTGTAGCTGCTGTAAATGTAAGTACTTGGAGCACCAAATGA

Protein Analysis

146

Amino Acids

15.26

Weight (kDa)

4.87

Isoelectric Point (pI)

35.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 187, 421
AgsI TTSAA 5 cut(s) 13, 107, 132, 284, 391
AluBI AGCT 7 cut(s) 44, 71, 110, 146, 164, 293, 404
AluI AGCT 7 cut(s) 44, 71, 110, 146, 164, 293, 404
Alw21I GWGCWC 1 cut(s) 431
AlwNI CAGNNNCTG 1 cut(s) 164
AoxI GGCC 3 cut(s) 59, 98, 134
ApeKI GCWGC 7 cut(s) 5, 71, 74, 110, 146, 161, 404
BbsI GAAGAC 1 cut(s) 291
Bbv12I GWGCWC 1 cut(s) 431
BbvI GCAGC 6 cut(s) 58, 86, 97, 133, 173, 391
BccI CCATC 1 cut(s) 227
BcgI CGANNNNNNTGC 2 cut(s) 251, 285
BfaI CTAG 2 cut(s) 224, 242
BfmI CTRYAG 1 cut(s) 72
BglI GCCNNNNNGGC 1 cut(s) 14
BisI GCNGC 7 cut(s) 6, 72, 75, 111, 147, 162, 405
BlpI GCTNAGC 1 cut(s) 84
BlsI GCNGC 7 cut(s) 7, 73, 76, 112, 148, 163, 406
BmcAI AGTACT 1 cut(s) 421
BmiI GGNNCC 1 cut(s) 339
BmsI GCATC 4 cut(s) 26, 62, 122, 158
BpiI GAAGAC 1 cut(s) 291
Bpu1102I GCTNAGC 1 cut(s) 84
BseXI GCAGC 6 cut(s) 58, 86, 97, 133, 173, 391
BseYI CCCAGC 2 cut(s) 157, 256
BshFI GGCC 3 cut(s) 61, 100, 136
BsiHKAI GWGCWC 1 cut(s) 431
BsnI GGCC 3 cut(s) 61, 100, 136
Bsp1286I GDGCHC 1 cut(s) 431
Bsp1720I GCTNAGC 1 cut(s) 84
BspANI GGCC 3 cut(s) 61, 100, 136
BspLI GGNNCC 1 cut(s) 339
BspMAI CTGCAG 1 cut(s) 76
BstAPI GCANNNNNTGC 1 cut(s) 80
BstDEI CTNAG 2 cut(s) 84, 368
BstMWI GCNNNNNNNGC 6 cut(s) 14, 50, 80, 116, 152, 161
BstSFI CTRYAG 1 cut(s) 72
BstV1I GCAGC 6 cut(s) 58, 86, 97, 133, 173, 391
BstV2I GAAGAC 1 cut(s) 291
BsuRI GGCC 3 cut(s) 61, 100, 136
CaiI CAGNNNCTG 1 cut(s) 164
Csp6I GTAC 2 cut(s) 186, 420
CviAII CATG 1 cut(s) 189
CviQI GTAC 2 cut(s) 186, 420
DdeI CTNAG 2 cut(s) 84, 368
Eco147I AGGCCT 3 cut(s) 61, 100, 136
Eco32I GATATC 1 cut(s) 247
EcoRV GATATC 1 cut(s) 247
FaeI CATG 1 cut(s) 192
FaiI YATR 4 cut(s) 178, 190, 270, 317
FatI CATG 1 cut(s) 188
Fnu4HI GCNGC 7 cut(s) 6, 72, 75, 111, 147, 162, 405
Fsp4HI GCNGC 7 cut(s) 6, 72, 75, 111, 147, 162, 405
FspBI CTAG 2 cut(s) 224, 242
GluI GCNGC 7 cut(s) 6, 72, 75, 111, 147, 162, 405
GsaI CCCAGC 2 cut(s) 161, 260
HaeIII GGCC 3 cut(s) 61, 100, 136
Hin1II CATG 1 cut(s) 192
HinfI GANTC 1 cut(s) 208
Hpy188III TCNNGA 2 cut(s) 171, 391
HpyAV CCTTC 2 cut(s) 7, 323
HpyCH4V TGCA 4 cut(s) 74, 113, 149, 272
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 50, 80, 116, 152, 161
HpyF3I CTNAG 2 cut(s) 84, 368
Hsp92II CATG 1 cut(s) 192
LmnI GCTCC 3 cut(s) 49, 337, 426
LpnPI CCDG 5 cut(s) 114, 134, 171, 184, 270
Lsp1109I GCAGC 6 cut(s) 58, 86, 97, 133, 173, 391
LweI GCATC 4 cut(s) 26, 62, 122, 158
MaeI CTAG 2 cut(s) 224, 242
MboII GAAGA 1 cut(s) 296
MfeI CAATTG 1 cut(s) 273
MhlI GDGCHC 1 cut(s) 431
MluCI AATT 1 cut(s) 273
MlyI GAGTC 1 cut(s) 202
MmeI TCCRAC 1 cut(s) 178
MnlI CCTC 6 cut(s) 72, 90, 147, 194, 326, 367
MseI TTAA 1 cut(s) 345
MspA1I CMGCKG 1 cut(s) 164
MunI CAATTG 1 cut(s) 273
MwoI GCNNNNNNNGC 6 cut(s) 14, 50, 80, 116, 152, 161
NlaIII CATG 1 cut(s) 192
NlaIV GGNNCC 1 cut(s) 339
PceI AGGCCT 3 cut(s) 61, 100, 136
PkrI GCNGC 7 cut(s) 7, 73, 76, 112, 148, 163, 406
PleI GAGTC 1 cut(s) 202
PpsI GAGTC 1 cut(s) 202
PspFI CCCAGC 2 cut(s) 157, 256
PspN4I GGNNCC 1 cut(s) 339
PstI CTGCAG 1 cut(s) 76
PstNI CAGNNNCTG 1 cut(s) 164
PvuII CAGCTG 1 cut(s) 164
RsaI GTAC 2 cut(s) 187, 421
RsaNI GTAC 2 cut(s) 186, 420
SaqAI TTAA 1 cut(s) 345
SatI GCNGC 7 cut(s) 6, 72, 75, 111, 147, 162, 405
ScaI AGTACT 1 cut(s) 421
SchI GAGTC 1 cut(s) 202
SduI GDGCHC 1 cut(s) 431
SfaNI GCATC 4 cut(s) 26, 62, 122, 158
SfcI CTRYAG 1 cut(s) 72
Sse9I AATT 1 cut(s) 273
SseBI AGGCCT 3 cut(s) 61, 100, 136
SspMI CTAG 2 cut(s) 224, 242
StuI AGGCCT 3 cut(s) 61, 100, 136
TaqI TCGA 1 cut(s) 95
TasI AATT 1 cut(s) 273
TatI WGTACW 1 cut(s) 419
Tru1I TTAA 1 cut(s) 345
Tru9I TTAA 1 cut(s) 345
TseI GCWGC 7 cut(s) 5, 71, 74, 110, 146, 161, 404
TspDTI ATGAA 2 cut(s) 294, 312
XspI CTAG 2 cut(s) 224, 242
ZrmI AGTACT 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.