RNA polymerase III
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097261 RchiOBHm_Chr4g0388121 RchiOBHm_Chr6g0254981 RchiOBHm_Chr6g0270571 |
| rosa_laevigata | RLG00000013625 RLG00000016400 RLG00000027818 RLG00000028940 RLG00000033711 RLG00000035539 RLG00000035931 |
| rosa_multiflora | Rmu_sc0000322.1_g000027 |
| rosa_roxburghii | Rroxscaffold_1G00026630 Rroxscaffold_5G00347830 |
| rosa_rugosa | Rorug02G0295700 Rorug03G0217900 Rorug04G0030800 Rorug04G0257000 Rorug05G0516900 Rorug06G0100200 Rorug06G0468100 |
| rosa_samantha | Rh1AG155900 Rh1AG219700 Rh1DG187200 Rh2BG424900 Rh4AG076000 Rh4BG015100 Rh4DG099500 Rh7CG342400 Rh7DG317900 Rh7DG373200 |
| rosa_wichuraiana | Rw3G022170 Rw7G027100 Rw7G027110 Rw7G031460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 46, 329 |
| AcuI | CTGAAG | 1 cut(s) | 177 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 178 |
| AgsI | TTSAA | 1 cut(s) | 328 |
| AluBI | AGCT | 3 cut(s) | 26, 143, 191 |
| AluI | AGCT | 3 cut(s) | 26, 143, 191 |
| Alw26I | GTCTC | 1 cut(s) | 295 |
| ApeKI | GCWGC | 1 cut(s) | 89 |
| ApoI | RAATTY | 2 cut(s) | 46, 329 |
| AsuC2I | CCSGG | 1 cut(s) | 173 |
| BbvI | GCAGC | 1 cut(s) | 76 |
| BcnI | CCSGG | 1 cut(s) | 173 |
| BcoDI | GTCTC | 1 cut(s) | 295 |
| BfaI | CTAG | 2 cut(s) | 192, 337 |
| BisI | GCNGC | 1 cut(s) | 90 |
| BlsI | GCNGC | 1 cut(s) | 91 |
| Bme1390I | CCNGG | 1 cut(s) | 173 |
| BmrFI | CCNGG | 1 cut(s) | 173 |
| BmsI | GCATC | 1 cut(s) | 83 |
| BpuMI | CCSGG | 1 cut(s) | 173 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 200, 230 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 178 |
| BseGI | GGATG | 1 cut(s) | 88 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 178 |
| BseRI | GAGGAG | 2 cut(s) | 139, 191 |
| BseXI | GCAGC | 1 cut(s) | 76 |
| BsiSI | CCGG | 1 cut(s) | 173 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 178 |
| BsmAI | GTCTC | 1 cut(s) | 295 |
| BspQI | GCTCTTC | 1 cut(s) | 177 |
| Bst6I | CTCTTC | 1 cut(s) | 177 |
| BstC8I | GCNNGC | 1 cut(s) | 189 |
| BstDEI | CTNAG | 1 cut(s) | 67 |
| BstF5I | GGATG | 1 cut(s) | 88 |
| BstMAI | GTCTC | 1 cut(s) | 295 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 197 |
| BstSCI | CCNGG | 1 cut(s) | 171 |
| BstV1I | GCAGC | 1 cut(s) | 76 |
| BtsCI | GGATG | 1 cut(s) | 88 |
| Cac8I | GCNNGC | 1 cut(s) | 189 |
| CviAII | CATG | 2 cut(s) | 197, 233 |
| CviJI | RGCY | 6 cut(s) | 26, 143, 155, 191, 256, 282 |
| CviKI_1 | RGCY | 6 cut(s) | 26, 143, 155, 191, 256, 282 |
| DdeI | CTNAG | 1 cut(s) | 67 |
| Eam1104I | CTCTTC | 1 cut(s) | 177 |
| EarI | CTCTTC | 1 cut(s) | 177 |
| Eco57I | CTGAAG | 1 cut(s) | 177 |
| EcoRI | GAATTC | 1 cut(s) | 46 |
| FaeI | CATG | 2 cut(s) | 200, 236 |
| FaiI | YATR | 7 cut(s) | 60, 106, 134, 149, 198, 224, 234 |
| FatI | CATG | 2 cut(s) | 196, 232 |
| Fnu4HI | GCNGC | 1 cut(s) | 90 |
| FokI | GGATG | 1 cut(s) | 95 |
| Fsp4HI | GCNGC | 1 cut(s) | 90 |
| FspBI | CTAG | 2 cut(s) | 192, 337 |
| GluI | GCNGC | 1 cut(s) | 90 |
| HapII | CCGG | 1 cut(s) | 173 |
| Hin1II | CATG | 2 cut(s) | 200, 236 |
| HinfI | GANTC | 1 cut(s) | 303 |
| HpaII | CCGG | 1 cut(s) | 173 |
| Hpy188I | TCNGA | 1 cut(s) | 82 |
| HpyCH4V | TGCA | 1 cut(s) | 62 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 197 |
| HpyF3I | CTNAG | 1 cut(s) | 67 |
| Hsp92II | CATG | 2 cut(s) | 200, 236 |
| LguI | GCTCTTC | 1 cut(s) | 177 |
| LmnI | GCTCC | 1 cut(s) | 23 |
| LpnPI | CCDG | 1 cut(s) | 186 |
| Lsp1109I | GCAGC | 1 cut(s) | 76 |
| LweI | GCATC | 1 cut(s) | 83 |
| MaeI | CTAG | 2 cut(s) | 192, 337 |
| MboII | GAAGA | 3 cut(s) | 55, 89, 194 |
| MluCI | AATT | 3 cut(s) | 30, 46, 329 |
| MlyI | GAGTC | 1 cut(s) | 297 |
| MnlI | CCTC | 7 cut(s) | 109, 117, 120, 169, 172, 204, 272 |
| MseI | TTAA | 1 cut(s) | 162 |
| MslI | CAYNNNNRTG | 1 cut(s) | 231 |
| MspI | CCGG | 1 cut(s) | 173 |
| MspR9I | CCNGG | 1 cut(s) | 173 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 197 |
| NciI | CCSGG | 1 cut(s) | 173 |
| NlaIII | CATG | 2 cut(s) | 200, 236 |
| PciSI | GCTCTTC | 1 cut(s) | 177 |
| PkrI | GCNGC | 1 cut(s) | 91 |
| PleI | GAGTC | 1 cut(s) | 297 |
| PpsI | GAGTC | 1 cut(s) | 297 |
| RseI | CAYNNNNRTG | 1 cut(s) | 231 |
| SapI | GCTCTTC | 1 cut(s) | 177 |
| SaqAI | TTAA | 1 cut(s) | 162 |
| SatI | GCNGC | 1 cut(s) | 90 |
| SchI | GAGTC | 1 cut(s) | 297 |
| ScrFI | CCNGG | 1 cut(s) | 173 |
| SetI | ASST | 5 cut(s) | 28, 131, 145, 193, 277 |
| SfaNI | GCATC | 1 cut(s) | 83 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 231 |
| Sse9I | AATT | 3 cut(s) | 30, 46, 329 |
| SspMI | CTAG | 2 cut(s) | 192, 337 |
| StyD4I | CCNGG | 1 cut(s) | 171 |
| TaqI | TCGA | 2 cut(s) | 114, 315 |
| TasI | AATT | 3 cut(s) | 30, 46, 329 |
| Tru1I | TTAA | 1 cut(s) | 162 |
| Tru9I | TTAA | 1 cut(s) | 162 |
| TseI | GCWGC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 3 cut(s) | 121, 249, 279 |
| XapI | RAATTY | 2 cut(s) | 46, 329 |
| XspI | CTAG | 2 cut(s) | 192, 337 |