No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097261 RchiOBHm_Chr4g0388121 RchiOBHm_Chr6g0254981 RchiOBHm_Chr6g0270571 |
| rosa_laevigata | RLG00000013625 RLG00000016400 RLG00000027818 RLG00000028940 RLG00000033711 RLG00000035539 RLG00000035931 |
| rosa_multiflora | Rmu_sc0000322.1_g000027 |
| rosa_roxburghii | Rroxscaffold_1G00026630 Rroxscaffold_5G00347830 |
| rosa_rugosa | Rorug02G0295700 Rorug03G0217900 Rorug04G0030800 Rorug04G0257000 Rorug05G0516900 Rorug06G0100200 Rorug06G0468100 |
| rosa_samantha | Rh1AG155900 Rh1AG219700 Rh1DG187200 Rh2BG424900 Rh4AG076000 Rh4BG015100 Rh4DG099500 Rh7CG342400 Rh7DG317900 Rh7DG373200 |
| rosa_wichuraiana | Rw3G022170 Rw7G027100 Rw7G027110 Rw7G031460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 90 |
| AciI | CCGC | 1 cut(s) | 269 |
| AcsI | RAATTY | 1 cut(s) | 108 |
| AfaI | GTAC | 1 cut(s) | 310 |
| AgsI | TTSAA | 3 cut(s) | 21, 45, 76 |
| AluBI | AGCT | 2 cut(s) | 142, 293 |
| AluI | AGCT | 2 cut(s) | 142, 293 |
| Alw21I | GWGCWC | 1 cut(s) | 320 |
| Alw26I | GTCTC | 1 cut(s) | 220 |
| ApeKI | GCWGC | 1 cut(s) | 293 |
| ApoI | RAATTY | 1 cut(s) | 108 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 71 |
| AspS9I | GGNCC | 1 cut(s) | 118 |
| AvaII | GGWCC | 1 cut(s) | 118 |
| Bbv12I | GWGCWC | 1 cut(s) | 320 |
| BbvI | GCAGC | 1 cut(s) | 280 |
| BcoDI | GTCTC | 1 cut(s) | 220 |
| BfmI | CTRYAG | 1 cut(s) | 288 |
| BisI | GCNGC | 1 cut(s) | 294 |
| BlsI | GCNGC | 1 cut(s) | 295 |
| BmcAI | AGTACT | 1 cut(s) | 310 |
| Bme18I | GGWCC | 1 cut(s) | 118 |
| BmgT120I | GGNCC | 1 cut(s) | 118 |
| BmiI | GGNNCC | 1 cut(s) | 119 |
| Bsa29I | ATCGAT | 1 cut(s) | 24 |
| BseCI | ATCGAT | 1 cut(s) | 24 |
| BseMII | CTCAG | 1 cut(s) | 271 |
| BseXI | GCAGC | 1 cut(s) | 280 |
| BshVI | ATCGAT | 1 cut(s) | 24 |
| BsiHKAI | GWGCWC | 1 cut(s) | 320 |
| BslFI | GGGAC | 1 cut(s) | 131 |
| BsmAI | GTCTC | 1 cut(s) | 220 |
| BsmFI | GGGAC | 1 cut(s) | 131 |
| BsmI | GAATGC | 1 cut(s) | 289 |
| Bsp1286I | GDGCHC | 1 cut(s) | 320 |
| BspACI | CCGC | 1 cut(s) | 269 |
| BspCNI | CTCAG | 1 cut(s) | 270 |
| BspDI | ATCGAT | 1 cut(s) | 24 |
| BspLI | GGNNCC | 1 cut(s) | 119 |
| BstDEI | CTNAG | 3 cut(s) | 143, 257, 279 |
| BstMAI | GTCTC | 1 cut(s) | 220 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 293 |
| BstSFI | CTRYAG | 1 cut(s) | 288 |
| BstV1I | GCAGC | 1 cut(s) | 280 |
| Bsu15I | ATCGAT | 1 cut(s) | 24 |
| BsuTUI | ATCGAT | 1 cut(s) | 24 |
| BtsIMutI | CAGTG | 1 cut(s) | 265 |
| Cfr13I | GGNCC | 1 cut(s) | 118 |
| ClaI | ATCGAT | 1 cut(s) | 24 |
| Csp6I | GTAC | 1 cut(s) | 309 |
| CviAII | CATG | 1 cut(s) | 113 |
| CviJI | RGCY | 2 cut(s) | 142, 293 |
| CviKI_1 | RGCY | 2 cut(s) | 142, 293 |
| CviQI | GTAC | 1 cut(s) | 309 |
| DdeI | CTNAG | 3 cut(s) | 143, 257, 279 |
| Eco32I | GATATC | 1 cut(s) | 28 |
| Eco47I | GGWCC | 1 cut(s) | 118 |
| EcoRV | GATATC | 1 cut(s) | 28 |
| FaeI | CATG | 1 cut(s) | 116 |
| FaiI | YATR | 4 cut(s) | 38, 90, 114, 137 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 226, 258 |
| FaqI | GGGAC | 1 cut(s) | 131 |
| FatI | CATG | 1 cut(s) | 112 |
| Fnu4HI | GCNGC | 1 cut(s) | 294 |
| Fsp4HI | GCNGC | 1 cut(s) | 294 |
| GluI | GCNGC | 1 cut(s) | 294 |
| Hin1II | CATG | 1 cut(s) | 116 |
| HinfI | GANTC | 1 cut(s) | 275 |
| HpyAV | CCTTC | 1 cut(s) | 211 |
| HpyCH4IV | ACGT | 1 cut(s) | 171 |
| HpyCH4V | TGCA | 2 cut(s) | 131, 159 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 293 |
| HpyF3I | CTNAG | 3 cut(s) | 143, 257, 279 |
| HpySE526I | ACGT | 1 cut(s) | 171 |
| Hsp92II | CATG | 1 cut(s) | 116 |
| LmnI | GCTCC | 1 cut(s) | 315 |
| LpnPI | CCDG | 2 cut(s) | 40, 79 |
| Lsp1109I | GCAGC | 1 cut(s) | 280 |
| MaeII | ACGT | 1 cut(s) | 171 |
| MaeIII | GTNAC | 1 cut(s) | 59 |
| MhlI | GDGCHC | 1 cut(s) | 320 |
| MluCI | AATT | 3 cut(s) | 50, 108, 204 |
| MnlI | CCTC | 3 cut(s) | 119, 214, 256 |
| MroXI | GAANNNNTTC | 1 cut(s) | 71 |
| MseI | TTAA | 1 cut(s) | 233 |
| Mva1269I | GAATGC | 1 cut(s) | 289 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 293 |
| NlaIII | CATG | 1 cut(s) | 116 |
| NlaIV | GGNNCC | 1 cut(s) | 119 |
| PctI | GAATGC | 1 cut(s) | 289 |
| PdmI | GAANNNNTTC | 1 cut(s) | 71 |
| PfeI | GAWTC | 1 cut(s) | 275 |
| PkrI | GCNGC | 1 cut(s) | 295 |
| PsiI | TTATAA | 1 cut(s) | 90 |
| PspN4I | GGNNCC | 1 cut(s) | 119 |
| PspPI | GGNCC | 1 cut(s) | 118 |
| RsaI | GTAC | 1 cut(s) | 310 |
| RsaNI | GTAC | 1 cut(s) | 309 |
| SaqAI | TTAA | 1 cut(s) | 233 |
| SatI | GCNGC | 1 cut(s) | 294 |
| Sau96I | GGNCC | 1 cut(s) | 118 |
| ScaI | AGTACT | 1 cut(s) | 310 |
| SduI | GDGCHC | 1 cut(s) | 320 |
| SetI | ASST | 6 cut(s) | 59, 130, 144, 174, 267, 295 |
| SfcI | CTRYAG | 1 cut(s) | 288 |
| SgeI | CNNG | 9 cut(s) | 67, 76, 88, 106, 125, 144, 178, 184, 258 |
| SinI | GGWCC | 1 cut(s) | 118 |
| Sse9I | AATT | 3 cut(s) | 50, 108, 204 |
| SsiI | CCGC | 1 cut(s) | 269 |
| TaiI | ACGT | 1 cut(s) | 174 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TasI | AATT | 3 cut(s) | 50, 108, 204 |
| TatI | WGTACW | 1 cut(s) | 308 |
| TfiI | GAWTC | 1 cut(s) | 275 |
| Tru1I | TTAA | 1 cut(s) | 233 |
| Tru9I | TTAA | 1 cut(s) | 233 |
| TscAI | CASTG | 1 cut(s) | 265 |
| TseI | GCWGC | 1 cut(s) | 293 |
| TspDTI | ATGAA | 2 cut(s) | 101, 152 |
| TspRI | CASTG | 1 cut(s) | 265 |
| VpaK11BI | GGWCC | 1 cut(s) | 118 |
| XapI | RAATTY | 1 cut(s) | 108 |
| XmnI | GAANNNNTTC | 1 cut(s) | 71 |
| ZrmI | AGTACT | 1 cut(s) | 310 |