Cytochrome p450
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097261 RchiOBHm_Chr4g0388121 RchiOBHm_Chr6g0254981 RchiOBHm_Chr6g0270571 |
| rosa_laevigata | RLG00000013625 RLG00000016400 RLG00000027818 RLG00000028940 RLG00000033711 RLG00000035539 RLG00000035931 |
| rosa_multiflora | Rmu_sc0000322.1_g000027 |
| rosa_roxburghii | Rroxscaffold_1G00026630 Rroxscaffold_5G00347830 |
| rosa_rugosa | Rorug02G0295700 Rorug03G0217900 Rorug04G0030800 Rorug04G0257000 Rorug05G0516900 Rorug06G0100200 Rorug06G0468100 |
| rosa_samantha | Rh1AG155900 Rh1AG219700 Rh1DG187200 Rh2BG424900 Rh4AG076000 Rh4BG015100 Rh4DG099500 Rh7CG342400 Rh7DG317900 Rh7DG373200 |
| rosa_wichuraiana | Rw3G022170 Rw7G027100 Rw7G027110 Rw7G031460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 105 |
| AciI | CCGC | 1 cut(s) | 176 |
| AclWI | GGATC | 1 cut(s) | 53 |
| AfaI | GTAC | 1 cut(s) | 217 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 81, 113 |
| AluBI | AGCT | 2 cut(s) | 18, 200 |
| AluI | AGCT | 2 cut(s) | 18, 200 |
| Alw21I | GWGCWC | 1 cut(s) | 227 |
| Alw26I | GTCTC | 1 cut(s) | 124 |
| AlwI | GGATC | 1 cut(s) | 53 |
| ApeKI | GCWGC | 2 cut(s) | 173, 200 |
| AspS9I | GGNCC | 1 cut(s) | 28 |
| AvaII | GGWCC | 1 cut(s) | 28 |
| Bbv12I | GWGCWC | 1 cut(s) | 227 |
| BbvI | GCAGC | 2 cut(s) | 185, 187 |
| BceAI | ACGGC | 1 cut(s) | 188 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 65, 99 |
| BcoDI | GTCTC | 1 cut(s) | 124 |
| BisI | GCNGC | 2 cut(s) | 174, 201 |
| BlsI | GCNGC | 2 cut(s) | 175, 202 |
| BmcAI | AGTACT | 1 cut(s) | 217 |
| Bme18I | GGWCC | 1 cut(s) | 28 |
| BmgT120I | GGNCC | 1 cut(s) | 28 |
| BseMII | CTCAG | 1 cut(s) | 175 |
| BseXI | GCAGC | 2 cut(s) | 185, 187 |
| BsiHKAI | GWGCWC | 1 cut(s) | 227 |
| BsmAI | GTCTC | 1 cut(s) | 124 |
| Bsp1286I | GDGCHC | 1 cut(s) | 227 |
| Bsp143I | GATC | 1 cut(s) | 58 |
| BspACI | CCGC | 1 cut(s) | 176 |
| BspCNI | CTCAG | 1 cut(s) | 174 |
| BspPI | GGATC | 1 cut(s) | 53 |
| BssMI | GATC | 1 cut(s) | 58 |
| BstC8I | GCNNGC | 1 cut(s) | 20 |
| BstDEI | CTNAG | 2 cut(s) | 161, 186 |
| BstKTI | GATC | 1 cut(s) | 61 |
| BstMAI | GTCTC | 1 cut(s) | 124 |
| BstMBI | GATC | 1 cut(s) | 58 |
| BstV1I | GCAGC | 2 cut(s) | 185, 187 |
| BstX2I | RGATCY | 1 cut(s) | 58 |
| BstYI | RGATCY | 1 cut(s) | 58 |
| BtsI | GCAGTG | 1 cut(s) | 172 |
| BtsIMutI | CAGTG | 1 cut(s) | 172 |
| Cac8I | GCNNGC | 1 cut(s) | 20 |
| Cfr13I | GGNCC | 1 cut(s) | 28 |
| Csp6I | GTAC | 1 cut(s) | 216 |
| CviJI | RGCY | 3 cut(s) | 5, 18, 200 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 18, 200 |
| CviQI | GTAC | 1 cut(s) | 216 |
| DdeI | CTNAG | 2 cut(s) | 161, 186 |
| DpnI | GATC | 1 cut(s) | 60 |
| DpnII | GATC | 1 cut(s) | 58 |
| Eco47I | GGWCC | 1 cut(s) | 28 |
| EcoT22I | ATGCAT | 1 cut(s) | 97 |
| FaiI | YATR | 5 cut(s) | 14, 51, 53, 78, 105 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 130, 162 |
| Fnu4HI | GCNGC | 2 cut(s) | 174, 201 |
| Fsp4HI | GCNGC | 2 cut(s) | 174, 201 |
| GluI | GCNGC | 2 cut(s) | 174, 201 |
| HindIII | AAGCTT | 1 cut(s) | 16 |
| HinfI | GANTC | 1 cut(s) | 182 |
| Hpy188I | TCNGA | 1 cut(s) | 58 |
| Hpy188III | TCNNGA | 1 cut(s) | 86 |
| HpyAV | CCTTC | 1 cut(s) | 115 |
| HpyCH4V | TGCA | 2 cut(s) | 71, 95 |
| HpyF3I | CTNAG | 2 cut(s) | 161, 186 |
| Kzo9I | GATC | 1 cut(s) | 58 |
| LmnI | GCTCC | 1 cut(s) | 222 |
| Lsp1109I | GCAGC | 2 cut(s) | 185, 187 |
| MalI | GATC | 1 cut(s) | 60 |
| MboI | GATC | 1 cut(s) | 58 |
| MboII | GAAGA | 1 cut(s) | 74 |
| MflI | RGATCY | 1 cut(s) | 58 |
| MhlI | GDGCHC | 1 cut(s) | 227 |
| MnlI | CCTC | 2 cut(s) | 118, 163 |
| Mph1103I | ATGCAT | 1 cut(s) | 97 |
| MseI | TTAA | 1 cut(s) | 137 |
| MspA1I | CMGCKG | 1 cut(s) | 176 |
| NdeII | GATC | 1 cut(s) | 58 |
| NsiI | ATGCAT | 1 cut(s) | 97 |
| PfeI | GAWTC | 1 cut(s) | 182 |
| PkrI | GCNGC | 2 cut(s) | 175, 202 |
| PsiI | TTATAA | 1 cut(s) | 105 |
| PspPI | GGNCC | 1 cut(s) | 28 |
| PsuI | RGATCY | 1 cut(s) | 58 |
| RsaI | GTAC | 1 cut(s) | 217 |
| RsaNI | GTAC | 1 cut(s) | 216 |
| SaqAI | TTAA | 1 cut(s) | 137 |
| SatI | GCNGC | 2 cut(s) | 174, 201 |
| Sau3AI | GATC | 1 cut(s) | 58 |
| Sau96I | GGNCC | 1 cut(s) | 28 |
| ScaI | AGTACT | 1 cut(s) | 217 |
| SduI | GDGCHC | 1 cut(s) | 227 |
| SetI | ASST | 3 cut(s) | 20, 114, 202 |
| SgeI | CNNG | 4 cut(s) | 31, 84, 98, 162 |
| SinI | GGWCC | 1 cut(s) | 28 |
| SsiI | CCGC | 1 cut(s) | 176 |
| TaqI | TCGA | 1 cut(s) | 85 |
| TaqII | GACCGA | 1 cut(s) | 45 |
| TatI | WGTACW | 1 cut(s) | 215 |
| TfiI | GAWTC | 1 cut(s) | 182 |
| Tru1I | TTAA | 1 cut(s) | 137 |
| Tru9I | TTAA | 1 cut(s) | 137 |
| TscAI | CASTG | 1 cut(s) | 172 |
| TseI | GCWGC | 2 cut(s) | 173, 200 |
| TspRI | CASTG | 1 cut(s) | 172 |
| VpaK11BI | GGWCC | 1 cut(s) | 28 |
| ZrmI | AGTACT | 1 cut(s) | 217 |
| Zsp2I | ATGCAT | 1 cut(s) | 97 |