RNA polymerase III
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097261 RchiOBHm_Chr4g0388121 RchiOBHm_Chr6g0254981 RchiOBHm_Chr6g0270571 |
| rosa_laevigata | RLG00000013625 RLG00000016400 RLG00000027818 RLG00000028940 RLG00000033711 RLG00000035539 RLG00000035931 |
| rosa_multiflora | Rmu_sc0000322.1_g000027 |
| rosa_roxburghii | Rroxscaffold_1G00026630 Rroxscaffold_5G00347830 |
| rosa_rugosa | Rorug02G0295700 Rorug03G0217900 Rorug04G0030800 Rorug04G0257000 Rorug05G0516900 Rorug06G0100200 Rorug06G0468100 |
| rosa_samantha | Rh1AG155900 Rh1AG219700 Rh1DG187200 Rh2BG424900 Rh4AG076000 Rh4BG015100 Rh4DG099500 Rh7CG342400 Rh7DG317900 Rh7DG373200 |
| rosa_wichuraiana | Rw3G022170 Rw7G027100 Rw7G027110 Rw7G031460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 354 |
| AcuI | CTGAAG | 1 cut(s) | 138 |
| AfaI | GTAC | 1 cut(s) | 463 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 139 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 330, 362 |
| AluBI | AGCT | 5 cut(s) | 80, 104, 152, 271, 446 |
| AluI | AGCT | 5 cut(s) | 80, 104, 152, 271, 446 |
| Alw21I | GWGCWC | 1 cut(s) | 473 |
| Alw26I | GTCTC | 1 cut(s) | 373 |
| AsuC2I | CCSGG | 1 cut(s) | 134 |
| AsuHPI | GGTGA | 1 cut(s) | 49 |
| Bbv12I | GWGCWC | 1 cut(s) | 473 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 314, 348 |
| BcnI | CCSGG | 1 cut(s) | 134 |
| BcoDI | GTCTC | 1 cut(s) | 373 |
| BfaI | CTAG | 1 cut(s) | 153 |
| BfmI | CTRYAG | 1 cut(s) | 441 |
| BmcAI | AGTACT | 1 cut(s) | 463 |
| Bme1390I | CCNGG | 1 cut(s) | 134 |
| BmrFI | CCNGG | 1 cut(s) | 134 |
| BpuMI | CCSGG | 1 cut(s) | 134 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 161, 191 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 139 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BseMII | CTCAG | 3 cut(s) | 196, 423, 424 |
| BseRI | GAGGAG | 1 cut(s) | 100 |
| BsiHKAI | GWGCWC | 1 cut(s) | 473 |
| BsiSI | CCGG | 1 cut(s) | 134 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BsmAI | GTCTC | 1 cut(s) | 373 |
| BsmI | GAATGC | 1 cut(s) | 442 |
| Bsp1286I | GDGCHC | 1 cut(s) | 473 |
| BspCNI | CTCAG | 3 cut(s) | 195, 423, 424 |
| BspQI | GCTCTTC | 1 cut(s) | 138 |
| Bst6I | CTCTTC | 2 cut(s) | 132, 138 |
| BstC8I | GCNNGC | 3 cut(s) | 106, 150, 273 |
| BstDEI | CTNAG | 3 cut(s) | 182, 410, 432 |
| BstMAI | GTCTC | 1 cut(s) | 373 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 158 |
| BstSCI | CCNGG | 1 cut(s) | 132 |
| BstSFI | CTRYAG | 1 cut(s) | 441 |
| BtsI | GCAGTG | 1 cut(s) | 426 |
| BtsIMutI | CAGTG | 2 cut(s) | 418, 426 |
| Cac8I | GCNNGC | 3 cut(s) | 106, 150, 273 |
| Csp6I | GTAC | 1 cut(s) | 462 |
| CviAII | CATG | 3 cut(s) | 158, 194, 254 |
| CviJI | RGCY | 9 cut(s) | 80, 104, 116, 152, 217, 243, 258, 271, 446 |
| CviKI_1 | RGCY | 9 cut(s) | 80, 104, 116, 152, 217, 243, 258, 271, 446 |
| CviQI | GTAC | 1 cut(s) | 462 |
| DdeI | CTNAG | 3 cut(s) | 182, 410, 432 |
| Eam1104I | CTCTTC | 2 cut(s) | 132, 138 |
| EarI | CTCTTC | 2 cut(s) | 132, 138 |
| Eco57I | CTGAAG | 1 cut(s) | 138 |
| EcoT22I | ATGCAT | 1 cut(s) | 346 |
| FaeI | CATG | 3 cut(s) | 161, 197, 257 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 379, 411 |
| FatI | CATG | 3 cut(s) | 157, 193, 253 |
| FspBI | CTAG | 1 cut(s) | 153 |
| HapII | CCGG | 1 cut(s) | 134 |
| Hin1II | CATG | 3 cut(s) | 161, 197, 257 |
| HindIII | AAGCTT | 1 cut(s) | 269 |
| HinfI | GANTC | 1 cut(s) | 428 |
| HpaII | CCGG | 1 cut(s) | 134 |
| HphI | GGTGA | 1 cut(s) | 49 |
| Hpy188I | TCNGA | 2 cut(s) | 185, 433 |
| Hpy188III | TCNNGA | 1 cut(s) | 335 |
| HpyAV | CCTTC | 1 cut(s) | 364 |
| HpyCH4V | TGCA | 2 cut(s) | 320, 344 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 158 |
| HpyF3I | CTNAG | 3 cut(s) | 182, 410, 432 |
| Hsp92II | CATG | 3 cut(s) | 161, 197, 257 |
| LguI | GCTCTTC | 1 cut(s) | 138 |
| LmnI | GCTCC | 1 cut(s) | 468 |
| LpnPI | CCDG | 3 cut(s) | 54, 141, 147 |
| MaeI | CTAG | 1 cut(s) | 153 |
| MboII | GAAGA | 4 cut(s) | 52, 149, 155, 323 |
| MhlI | GDGCHC | 1 cut(s) | 473 |
| MluCI | AATT | 1 cut(s) | 16 |
| MnlI | CCTC | 8 cut(s) | 78, 81, 133, 165, 201, 233, 367, 409 |
| Mph1103I | ATGCAT | 1 cut(s) | 346 |
| MseI | TTAA | 3 cut(s) | 15, 123, 386 |
| MslI | CAYNNNNRTG | 1 cut(s) | 192 |
| MspA1I | CMGCKG | 1 cut(s) | 80 |
| MspI | CCGG | 1 cut(s) | 134 |
| MspR9I | CCNGG | 1 cut(s) | 134 |
| Mva1269I | GAATGC | 1 cut(s) | 442 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 158 |
| NciI | CCSGG | 1 cut(s) | 134 |
| NlaIII | CATG | 3 cut(s) | 161, 197, 257 |
| NsiI | ATGCAT | 1 cut(s) | 346 |
| PciSI | GCTCTTC | 1 cut(s) | 138 |
| PctI | GAATGC | 1 cut(s) | 442 |
| PfeI | GAWTC | 1 cut(s) | 428 |
| PsiI | TTATAA | 1 cut(s) | 354 |
| PvuII | CAGCTG | 1 cut(s) | 80 |
| RsaI | GTAC | 1 cut(s) | 463 |
| RsaNI | GTAC | 1 cut(s) | 462 |
| RseI | CAYNNNNRTG | 1 cut(s) | 192 |
| SapI | GCTCTTC | 1 cut(s) | 138 |
| SaqAI | TTAA | 3 cut(s) | 15, 123, 386 |
| ScaI | AGTACT | 1 cut(s) | 463 |
| ScrFI | CCNGG | 1 cut(s) | 134 |
| SduI | GDGCHC | 1 cut(s) | 473 |
| SetI | ASST | 9 cut(s) | 82, 92, 106, 130, 154, 238, 273, 363, 448 |
| SfcI | CTRYAG | 1 cut(s) | 441 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 192 |
| Sse9I | AATT | 1 cut(s) | 16 |
| SspMI | CTAG | 1 cut(s) | 153 |
| StyD4I | CCNGG | 1 cut(s) | 132 |
| TaqI | TCGA | 1 cut(s) | 334 |
| TasI | AATT | 1 cut(s) | 16 |
| TatI | WGTACW | 1 cut(s) | 461 |
| TfiI | GAWTC | 1 cut(s) | 428 |
| Tru1I | TTAA | 3 cut(s) | 15, 123, 386 |
| Tru9I | TTAA | 3 cut(s) | 15, 123, 386 |
| TscAI | CASTG | 2 cut(s) | 418, 426 |
| TspDTI | ATGAA | 2 cut(s) | 82, 210 |
| TspRI | CASTG | 2 cut(s) | 418, 426 |
| XspI | CTAG | 1 cut(s) | 153 |
| ZrmI | AGTACT | 1 cut(s) | 463 |
| Zsp2I | ATGCAT | 1 cut(s) | 346 |