RchiOBHm_Chr1g0327271

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001580
Physical Location & Seq
Reverse (-)
16012443 .. 16014493
2051 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1833 bp
ATGGACCTTTTTCGACGCATGAGGGAAGACAACACCAACCCAAATGCCCACACTTTCGCTGGAGTCTTCACTGCTGCTTCCCATGAAGCGTCTGGCGTTTTCGGTGGGCAGAAGATTCATGCTCTTGCGATCAAAGCAGCGAGCTTTTTCGACGTGTTTGTTGGGAGTTCTTTACTTAATATGTACTGTAAAATGGGTCTTGTGGGGGATGCACGTAAGGTGTTTGATAGAATGCCTGAGAGGAATTCGGTTTCGTGGGCTACTATGATTTCGGGGTATGCAATGCAACGCCTGGCTGGAGATGCGTTAGAGCTTTTCGGGTTGATGCGTAGAAGTGAGGAGAATGAGGGAGAGAATGAGTTTGTTTTGACTAGTGTTGTGAGTGCCTTGGCTGTTCCTGAGTTTGTTGATACGGGGAAGCAAATTCACTGTCATGCGGTGAAAAATGGGCTGATGACTTTTGTTTCTGTTGGGAATGCGGTTGTTACAATGTATGCGAAATGTGGAAATTTGGACGATGCGCTTCGAACTTTTGAATTGTGTGGTGATAAGAATTCCATCACATGGTCTGCGATGATATGTGGTTTTGCACAGAGTGGGGATTCCCAGAAGGCTTTGAACTTGCTTCGAGACATGCATTTTGCAGGGATAATGCCGAGCCAGTACACATTTGTTGGGGTCATCAATGCTTGTGGTGACATTGGTGCTCTTAAAGAAGGACAACAAGGTCATGGTTATTTATTGAAGATGGGATTCGAATTGCAGGTATATATAATGTCAGCTTTGGTTGACATGTATGCCAAATGTGGTAGAGTTTGTGATGCTCGTAATGGGTTTGATTATTTAAAAGAACCTGATGTTGTTCTTTGGACTTCTATGATTGGAGGGTATGTACAAAATGGGGAGTATGAAGCTGCTTTGGGTTTGTACTGCAGAATGCACAAGGAGGGAATCACGCCCAATAAACTTACTATGGCCAGTGTCTTAAAAGCATGCTCGAGCTTAAGTTCTTTTGAACAAGGAAAGCAAATCCATGCCCGTACAATCAAGTATGGATTCAGTCTTGAAGTTCCAATTGGAAGTGCTCTTTCTACCATGTATGCAAAGTGTGGGAATTTGGAAGATGGGAATCTTGTATTTAGGAGGATGCCGGTGAGGGATGTAGTAGCTTGGAATGGAATAATCTCTGGCCTTTCGCAAAATGGTCGAGGGACAGAAGCTTTAGAGCTCTTTGAGGAGATGCGAATGGGGGACACAAAGCCGGATTACGTCACATTTGTAAATGTCCTCTCTGCTTGCAGCCATATGGGATTCGTTGAGAGAGGATGGATTTATTTCAAGATGATGTATAATGAATTTGGCATAGCCCCAAGGGTGGAGCATTATGCTTGCATGGTTGATGTCATGAGCCGCGCTGGGAGGTTAGATGAAGCCAAAGACTTCATAGAATCAGCAACTATCGATCATGGCATTTGTTTATGGCGTATTTTATTAAGTGCTTGTCGGAACTACCGGAATTATGAATTAGGAGCTTATGCTGGAGAGAAACTTATTGAGTTAGGAACACCAGAATCATCTACGTATGTGTTGTTGTCAAGCATATATACTTCCTTGGGCAGGCGGGAAGATGTAGAGCGGGTAAGGAGGATGATGAATCTTAGAGGGGTGAGTAAGGAGCCTGGGTGTAGCTGGATTGAGTTGAAGAGTCAGGTTCATGTGTTTGTTGTTCATGATGAGATGCATCCGCATATTGAAAATATATATGCTGAGATCCGAAGGTTAAAAAAGCATATGAAGGATGAAGGTTACCAACCTTCTAGTATCACCTTTTGA

Protein Analysis

610

Amino Acids

68.04

Weight (kDa)

6.3

Isoelectric Point (pI)

46.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 184 - 231 1e-09 PPR repeat family
PPR_3 PF13812 284 - 332 2.5e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 285 - 333 1.5e-12 PPR repeat family
PPR PF01535 288 - 318 7e-08 PPR repeat
PPR_2 PF13041 386 - 434 1e-10 PPR repeat family
PPR PF01535 389 - 415 7.9e-07 PPR repeat
E_motif PF20431 504 - 566 2.3e-18 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 726
Acc36I ACCTGC 1 cut(s) 754
AccB7I CCANNNNNTGG 1 cut(s) 564
AccBSI CCGCTC 1 cut(s) 1636
AccII CGCG 1 cut(s) 1413
AciI CCGC 6 cut(s) 437, 479, 1411, 1621, 1636, 1745
AclWI GGATC 1 cut(s) 1765
AcoI YGGCCR 1 cut(s) 975
AcsI RAATTY 6 cut(s) 244, 423, 508, 553, 1114, 1355
AdeI CACNNNGTG 1 cut(s) 596
AfaI GTAC 5 cut(s) 185, 665, 894, 929, 1042
AfiI CCNNNNNNNGG 3 cut(s) 564, 1375, 1617
AflII CTTAAG 1 cut(s) 1003
AflIII ACRYGT 2 cut(s) 153, 792
AgsI TTSAA 8 cut(s) 536, 619, 745, 1016, 1067, 1339, 1702, 1754
AhlI ACTAGT 1 cut(s) 371
AjiI CACGTC 1 cut(s) 154
AjnI CCWGG 2 cut(s) 291, 1678
AjuI GAANNNNNNNTTGG 2 cut(s) 1059, 1091
Alw21I GWGCWC 3 cut(s) 709, 1087, 1230
Alw26I GTCTC 1 cut(s) 624
AlwI GGATC 1 cut(s) 1765
Ama87I CYCGRG 1 cut(s) 997
AoxI GGCC 2 cut(s) 975, 1189
ApeKI GCWGC 4 cut(s) 74, 137, 914, 1299
ApoI RAATTY 6 cut(s) 244, 423, 508, 553, 1114, 1355
ArsI GACNNNNNNTTYG 4 cut(s) 415, 447, 623, 655
AspLEI GCGC 2 cut(s) 523, 1415
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 6 cut(s) 451, 557, 707, 1165, 1678, 1816
AsuII TTCGAA 2 cut(s) 526, 756
AvaI CYCGRG 1 cut(s) 997
AvaII GGWCC 1 cut(s) 4
BalI TGGCCA 1 cut(s) 977
BanII GRGCYC 1 cut(s) 1230
BbsI GAAGAC 2 cut(s) 33, 58
Bbv12I GWGCWC 3 cut(s) 709, 1087, 1230
BbvI GCAGC 4 cut(s) 61, 149, 901, 1311
BccI CCATC 4 cut(s) 566, 742, 1118, 1320
BcgI CGANNNNNNTGC 2 cut(s) 1187, 1221
BciT130I CCWGG 2 cut(s) 293, 1680
BcoDI GTCTC 1 cut(s) 624
BcuI ACTAGT 1 cut(s) 371
BfaI CTAG 2 cut(s) 372, 1818
BfmI CTRYAG 1 cut(s) 931
BfrI CTTAAG 1 cut(s) 1003
BfuAI ACCTGC 1 cut(s) 754
BisI GCNGC 5 cut(s) 75, 138, 915, 1300, 1411
BlsI GCNGC 5 cut(s) 76, 139, 916, 1301, 1412
Bme1390I CCNGG 2 cut(s) 293, 1680
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 997
BmgBI CACGTC 1 cut(s) 154
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 1677
BmrFI CCNGG 2 cut(s) 293, 1680
BmsI GCATC 9 cut(s) 199, 292, 315, 508, 811, 1137, 1230, 1728, 1750
BpiI GAAGAC 2 cut(s) 33, 58
BpmI CTGGAG 3 cut(s) 81, 318, 1560
Bpu14I TTCGAA 2 cut(s) 526, 756
Bsa29I ATCGAT 1 cut(s) 1461
BsaAI YACGTR 2 cut(s) 215, 1581
BsaBI GATNNNNATC 1 cut(s) 1128
BsaJI CCNNGG 4 cut(s) 387, 1370, 1611, 1679
BsaWI WCCGGW 1 cut(s) 1512
BsaXI ACNNNNNCTCC 4 cut(s) 876, 906, 1667, 1697
Bsc4I CCNNNNNNNGG 3 cut(s) 564, 1375, 1617
Bse118I RCCGGY 1 cut(s) 1150
Bse1I ACTGG 2 cut(s) 661, 978
Bse3DI GCAATG 1 cut(s) 288
Bse8I GATNNNNATC 1 cut(s) 1128
BseBI CCWGG 2 cut(s) 293, 1680
BseCI ATCGAT 1 cut(s) 1461
BseDI CCNNGG 4 cut(s) 387, 1370, 1611, 1679
BseGI GGATG 7 cut(s) 214, 1152, 1165, 1331, 1653, 1741, 1804
BseJI GATNNNNATC 1 cut(s) 1128
BseLI CCNNNNNNNGG 3 cut(s) 564, 1375, 1617
BseMI GCAATG 1 cut(s) 288
BseMII CTCAG 3 cut(s) 228, 390, 1758
BseNI ACTGG 2 cut(s) 661, 978
BseRI GAGGAG 2 cut(s) 353, 1250
BseXI GCAGC 4 cut(s) 61, 149, 901, 1311
BseYI CCCAGC 1 cut(s) 1415
Bsh1236I CGCG 1 cut(s) 1413
BshFI GGCC 2 cut(s) 977, 1191
BshVI ATCGAT 1 cut(s) 1461
BsiHKAI GWGCWC 3 cut(s) 709, 1087, 1230
BsiHKCI CYCGRG 1 cut(s) 997
BsiSI CCGG 3 cut(s) 1151, 1262, 1513
BslFI GGGAC 2 cut(s) 1225, 1265
BslI CCNNNNNNNGG 3 cut(s) 564, 1375, 1617
BsmAI GTCTC 1 cut(s) 624
BsmFI GGGAC 2 cut(s) 1225, 1265
BsmI GAATGC 3 cut(s) 237, 481, 942
BsnI GGCC 2 cut(s) 977, 1191
BsoBI CYCGRG 1 cut(s) 997
Bsp119I TTCGAA 2 cut(s) 526, 756
Bsp1286I GDGCHC 3 cut(s) 709, 1087, 1230
Bsp1407I TGTACA 1 cut(s) 892
Bsp143I GATC 3 cut(s) 129, 1462, 1770
BspACI CCGC 6 cut(s) 437, 479, 1411, 1621, 1636, 1745
BspANI GGCC 2 cut(s) 977, 1191
BspCNI CTCAG 3 cut(s) 229, 391, 1759
BspDI ATCGAT 1 cut(s) 1461
BspFNI CGCG 1 cut(s) 1413
BspHI TCATGA 2 cut(s) 1404, 1729
BspLI GGNNCC 1 cut(s) 1677
BspMAI CTGCAG 1 cut(s) 935
BspMI ACCTGC 1 cut(s) 754
BspPI GGATC 1 cut(s) 1765
BspT104I TTCGAA 2 cut(s) 526, 756
BspTI CTTAAG 1 cut(s) 1003
BsrBI CCGCTC 1 cut(s) 1636
BsrDI GCAATG 1 cut(s) 288
BsrFI RCCGGY 1 cut(s) 1150
BsrGI TGTACA 1 cut(s) 892
BsrI ACTGG 2 cut(s) 661, 978
BssAI RCCGGY 1 cut(s) 1150
BssECI CCNNGG 4 cut(s) 387, 1370, 1611, 1679
BssMI GATC 3 cut(s) 129, 1462, 1770
BssT1I CCWWGG 3 cut(s) 387, 1370, 1611
Bst2UI CCWGG 2 cut(s) 293, 1680
Bst4CI ACNGT 2 cut(s) 188, 431
Bst6I CTCTTC 1 cut(s) 1697
BstAFI CTTAAG 1 cut(s) 1003
BstAUI TGTACA 1 cut(s) 892
BstBAI YACGTR 2 cut(s) 215, 1581
BstBI TTCGAA 2 cut(s) 526, 756
BstC8I GCNNGC 5 cut(s) 142, 994, 1297, 1390, 1619
BstDEI CTNAG 4 cut(s) 237, 399, 1658, 1767
BstEII GGTNACC 1 cut(s) 1805
BstENI CCTNNNNNAGG 1 cut(s) 1615
BstF5I GGATG 7 cut(s) 214, 1152, 1165, 1331, 1653, 1741, 1804
BstFNI CGCG 1 cut(s) 1413
BstHHI GCGC 2 cut(s) 523, 1415
BstKTI GATC 3 cut(s) 132, 1465, 1773
BstMAI GTCTC 1 cut(s) 624
BstMBI GATC 3 cut(s) 129, 1462, 1770
BstMWI GCNNNNNNNGC 2 cut(s) 134, 302
BstNI CCWGG 2 cut(s) 293, 1680
BstNSI RCATGY 3 cut(s) 637, 796, 996
BstPI GGTNACC 1 cut(s) 1805
BstSCI CCNGG 2 cut(s) 291, 1678
BstSFI CTRYAG 1 cut(s) 931
BstSNI TACGTA 1 cut(s) 1581
BstUI CGCG 1 cut(s) 1413
BstV1I GCAGC 4 cut(s) 61, 149, 901, 1311
BstV2I GAAGAC 2 cut(s) 33, 58
BstX2I RGATCY 1 cut(s) 1770
BstYI RGATCY 1 cut(s) 1770
Bsu15I ATCGAT 1 cut(s) 1461
BsuRI GGCC 2 cut(s) 977, 1191
BsuTUI ATCGAT 1 cut(s) 1461
BtgZI GCGATG 1 cut(s) 587
BtrI CACGTC 1 cut(s) 154
BtsCI GGATG 7 cut(s) 214, 1152, 1165, 1331, 1653, 1741, 1804
BtsI GCAGTG 1 cut(s) 69
BtsIMutI CAGTG 3 cut(s) 69, 427, 985
BveI ACCTGC 1 cut(s) 754
Cac8I GCNNGC 5 cut(s) 142, 994, 1297, 1390, 1619
CciI TCATGA 2 cut(s) 1404, 1729
CfoI GCGC 2 cut(s) 523, 1415
Cfr10I RCCGGY 1 cut(s) 1150
Cfr13I GGNCC 1 cut(s) 4
ClaI ATCGAT 1 cut(s) 1461
CseI GACGC 2 cut(s) 24, 78
Csp6I GTAC 5 cut(s) 184, 664, 893, 928, 1041
CspCI CAANNNNNGTGG 2 cut(s) 673, 708
CviQI GTAC 5 cut(s) 184, 664, 893, 928, 1041
DdeI CTNAG 4 cut(s) 237, 399, 1658, 1767
DpnI GATC 3 cut(s) 131, 1464, 1772
DpnII GATC 3 cut(s) 129, 1462, 1770
DraI TTTAAA 1 cut(s) 846
DraIII CACNNNGTG 1 cut(s) 596
DrdI GACNNNNNNGTC 1 cut(s) 726
DseDI GACNNNNNNGTC 1 cut(s) 726
EaeI YGGCCR 1 cut(s) 975
Eam1104I CTCTTC 1 cut(s) 1697
EarI CTCTTC 1 cut(s) 1697
Ecl136II GAGCTC 1 cut(s) 1228
Eco105I TACGTA 1 cut(s) 1581
Eco130I CCWWGG 3 cut(s) 387, 1370, 1611
Eco24I GRGCYC 1 cut(s) 1230
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 1228
Eco88I CYCGRG 1 cut(s) 997
Eco91I GGTNACC 1 cut(s) 1805
EcoICRI GAGCTC 1 cut(s) 1228
EcoNI CCTNNNNNAGG 1 cut(s) 1615
EcoO65I GGTNACC 1 cut(s) 1805
EcoRI GAATTC 2 cut(s) 244, 553
EcoRII CCWGG 2 cut(s) 291, 1678
EcoT14I CCWWGG 3 cut(s) 387, 1370, 1611
EcoT22I ATGCAT 2 cut(s) 639, 1743
EcoT38I GRGCYC 1 cut(s) 1230
ErhI CCWWGG 3 cut(s) 387, 1370, 1611
FaqI GGGAC 2 cut(s) 1225, 1265
FauI CCCGC 2 cut(s) 1614, 1629
FauNDI CATATG 2 cut(s) 1305, 1791
Fnu4HI GCNGC 5 cut(s) 75, 138, 915, 1300, 1411
FokI GGATG 7 cut(s) 221, 1159, 1172, 1338, 1660, 1728, 1811
FriOI GRGCYC 1 cut(s) 1230
Fsp4HI GCNGC 5 cut(s) 75, 138, 915, 1300, 1411
FspBI CTAG 2 cut(s) 372, 1818
GlaI GCGC 2 cut(s) 522, 1414
GluI GCNGC 5 cut(s) 75, 138, 915, 1300, 1411
GsaI CCCAGC 1 cut(s) 1419
GsuI CTGGAG 3 cut(s) 81, 318, 1560
HaeIII GGCC 2 cut(s) 977, 1191
HapII CCGG 3 cut(s) 1151, 1262, 1513
HgaI GACGC 2 cut(s) 24, 78
HhaI GCGC 2 cut(s) 523, 1415
Hin6I GCGC 2 cut(s) 521, 1413
HinP1I GCGC 2 cut(s) 521, 1413
HincII GTYRAC 1 cut(s) 790
HindII GTYRAC 1 cut(s) 790
HindIII AAGCTT 1 cut(s) 1218
HpaII CCGG 3 cut(s) 1151, 1262, 1513
HphI GGTGA 6 cut(s) 451, 557, 707, 1165, 1678, 1816
Hpy166II GTNNAC 2 cut(s) 666, 790
Hpy188I TCNGA 2 cut(s) 1506, 1775
Hpy188III TCNNGA 6 cut(s) 398, 629, 1064, 1339, 1405, 1730
Hpy8I GTNNAC 2 cut(s) 666, 790
Hpy99I CGWCG 2 cut(s) 18, 155
HpyAV CCTTC 6 cut(s) 604, 710, 1770, 1789, 1796, 1824
HpyCH4III ACNGT 2 cut(s) 188, 431
HpyCH4IV ACGT 4 cut(s) 153, 214, 1269, 1580
HpyF10VI GCNNNNNNNGC 2 cut(s) 134, 302
HpyF3I CTNAG 4 cut(s) 237, 399, 1658, 1767
HpySE526I ACGT 4 cut(s) 153, 214, 1269, 1580
HspAI GCGC 2 cut(s) 521, 1413
Kzo9I GATC 3 cut(s) 129, 1462, 1770
LmnI GCTCC 3 cut(s) 1378, 1529, 1675
Lsp1109I GCAGC 4 cut(s) 61, 149, 901, 1311
LweI GCATC 9 cut(s) 199, 292, 315, 508, 811, 1137, 1230, 1728, 1750
MaeI CTAG 2 cut(s) 372, 1818
MaeII ACGT 4 cut(s) 153, 214, 1269, 1580
MaeIII GTNAC 4 cut(s) 484, 695, 1270, 1805
MalI GATC 3 cut(s) 131, 1464, 1772
MbiI CCGCTC 1 cut(s) 1636
MboI GATC 3 cut(s) 129, 1462, 1770
MboII GAAGA 7 cut(s) 38, 58, 124, 757, 1133, 1637, 1714
MfeI CAATTG 1 cut(s) 1074
MflI RGATCY 1 cut(s) 1770
MhlI GDGCHC 3 cut(s) 709, 1087, 1230
MlsI TGGCCA 1 cut(s) 977
MluNI TGGCCA 1 cut(s) 977
MlyI GAGTC 2 cut(s) 72, 1714
MmeI TCCRAC 1 cut(s) 1484
Mox20I TGGCCA 1 cut(s) 977
Mph1103I ATGCAT 2 cut(s) 639, 1743
MscI TGGCCA 1 cut(s) 977
MseI TTAA 7 cut(s) 177, 711, 845, 986, 1004, 1493, 1781
MslI CAYNNNNRTG 1 cut(s) 432
Msp20I TGGCCA 1 cut(s) 977
MspCI CTTAAG 1 cut(s) 1003
MspI CCGG 3 cut(s) 1151, 1262, 1513
MspR9I CCNGG 2 cut(s) 293, 1680
MunI CAATTG 1 cut(s) 1074
Mva1269I GAATGC 3 cut(s) 237, 481, 942
MvaI CCWGG 2 cut(s) 293, 1680
MvnI CGCG 1 cut(s) 1413
MwoI GCNNNNNNNGC 2 cut(s) 134, 302
NdeI CATATG 2 cut(s) 1305, 1791
NdeII GATC 3 cut(s) 129, 1462, 1770
NlaIV GGNNCC 1 cut(s) 1677
NmeAIII GCCGAG 1 cut(s) 681
NmuCI GTSAC 2 cut(s) 695, 1270
NsiI ATGCAT 2 cut(s) 639, 1743
NspI RCATGY 3 cut(s) 637, 796, 996
NspV TTCGAA 2 cut(s) 526, 756
PaeI GCATGC 1 cut(s) 996
PaeR7I CTCGAG 1 cut(s) 997
PagI TCATGA 2 cut(s) 1404, 1729
PciI ACATGT 1 cut(s) 792
PctI GAATGC 3 cut(s) 237, 481, 942
PflMI CCANNNNNTGG 1 cut(s) 564
PkrI GCNGC 5 cut(s) 76, 139, 916, 1301, 1412
PleI GAGTC 2 cut(s) 71, 1713
PpsI GAGTC 2 cut(s) 71, 1713
Ppu21I YACGTR 2 cut(s) 215, 1581
PscI ACATGT 1 cut(s) 792
Psp124BI GAGCTC 1 cut(s) 1230
Psp6I CCWGG 2 cut(s) 291, 1678
PspEI GGTNACC 1 cut(s) 1805
PspFI CCCAGC 1 cut(s) 1415
PspGI CCWGG 2 cut(s) 291, 1678
PspN4I GGNNCC 1 cut(s) 1677
PspPI GGNCC 1 cut(s) 4
PspXI VCTCGAGB 1 cut(s) 997
PstI CTGCAG 1 cut(s) 935
PsuI RGATCY 1 cut(s) 1770
RsaI GTAC 5 cut(s) 185, 665, 894, 929, 1042
RsaNI GTAC 5 cut(s) 184, 664, 893, 928, 1041
RseI CAYNNNNRTG 1 cut(s) 432
SacI GAGCTC 1 cut(s) 1230
SaqAI TTAA 7 cut(s) 177, 711, 845, 986, 1004, 1493, 1781
SatI GCNGC 5 cut(s) 75, 138, 915, 1300, 1411
Sau3AI GATC 3 cut(s) 129, 1462, 1770
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 2 cut(s) 72, 1714
ScrFI CCNGG 2 cut(s) 293, 1680
SduI GDGCHC 3 cut(s) 709, 1087, 1230
SfaNI GCATC 9 cut(s) 199, 292, 315, 508, 811, 1137, 1230, 1728, 1750
SfcI CTRYAG 1 cut(s) 931
Sfr274I CTCGAG 1 cut(s) 997
SfuI TTCGAA 2 cut(s) 526, 756
SinI GGWCC 1 cut(s) 4
SlaI CTCGAG 1 cut(s) 997
SmiMI CAYNNNNRTG 1 cut(s) 432
SmlI CTYRAG 2 cut(s) 997, 1003
SmoI CTYRAG 2 cut(s) 997, 1003
SnaBI TACGTA 1 cut(s) 1581
SpeI ACTAGT 1 cut(s) 371
SphI GCATGC 1 cut(s) 996
SsiI CCGC 6 cut(s) 437, 479, 1411, 1621, 1636, 1745
SspMI CTAG 2 cut(s) 372, 1818
SstI GAGCTC 1 cut(s) 1230
StyD4I CCNGG 2 cut(s) 291, 1678
StyI CCWWGG 3 cut(s) 387, 1370, 1611
TaaI ACNGT 2 cut(s) 188, 431
TaiI ACGT 4 cut(s) 156, 217, 1272, 1583
TaqI TCGA 8 cut(s) 13, 150, 526, 628, 756, 998, 1207, 1461
TatI WGTACW 4 cut(s) 183, 663, 892, 927
TauI GCSGC 1 cut(s) 1413
Tru1I TTAA 7 cut(s) 177, 711, 845, 986, 1004, 1493, 1781
Tru9I TTAA 7 cut(s) 177, 711, 845, 986, 1004, 1493, 1781
TscAI CASTG 3 cut(s) 76, 434, 985
TseFI GTSAC 2 cut(s) 695, 1270
TseI GCWGC 4 cut(s) 74, 137, 914, 1299
Tsp45I GTSAC 2 cut(s) 695, 1270
TspRI CASTG 3 cut(s) 76, 434, 985
Van91I CCANNNNNTGG 1 cut(s) 564
Vha464I CTTAAG 1 cut(s) 1003
VpaK11BI GGWCC 1 cut(s) 4
XagI CCTNNNNNAGG 1 cut(s) 1615
XapI RAATTY 6 cut(s) 244, 423, 508, 553, 1114, 1355
XceI RCATGY 3 cut(s) 637, 796, 996
XcmI CCANNNNNNNNNTGG 2 cut(s) 56, 89
XhoI CTCGAG 1 cut(s) 997
XspI CTAG 2 cut(s) 372, 1818
Zsp2I ATGCAT 2 cut(s) 639, 1743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.