cucumisin-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0325921 |
| rosa_laevigata | RLG00000013895 RLG00000016549 RLG00000027113 |
| rosa_multiflora | Rmu_co8145310.1_g000001 Rmu_sc0003683.1_g000004 Rmu_sc0013657.1_g000015 |
| rosa_roxburghii | Rroxscaffold_4G00309930 |
| rosa_rugosa | Rorug04G0112300 |
| rosa_samantha | Rh1AG072200 Rh1AG072500 Rh1BG155700 Rh1BG323700 Rh1CG174700 Rh1CG336900 Rh1CG339700 Rh1DG076500 Rh1DG076900 Rh1DG103000 Rh1DG187300 Rh1DG347100 Rh1DG349600 Rh1DG350900 Rh1DG354300 Rh1DG356800 Rh4AG068100 Rh4AG068200 Rh4BG066600 Rh4CG073800 Rh4DG063600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 133 |
| AccB1I | GGYRCC | 1 cut(s) | 133 |
| AfaI | GTAC | 1 cut(s) | 135 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 128 |
| AgsI | TTSAA | 1 cut(s) | 240 |
| AluBI | AGCT | 2 cut(s) | 74, 224 |
| AluI | AGCT | 2 cut(s) | 74, 224 |
| ApeKI | GCWGC | 2 cut(s) | 74, 250 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 209 |
| Asp718I | GGTACC | 1 cut(s) | 133 |
| BanI | GGYRCC | 1 cut(s) | 133 |
| BbvI | GCAGC | 2 cut(s) | 61, 237 |
| BccI | CCATC | 1 cut(s) | 6 |
| BfmI | CTRYAG | 1 cut(s) | 167 |
| BisI | GCNGC | 2 cut(s) | 75, 251 |
| BlsI | GCNGC | 2 cut(s) | 76, 252 |
| BmiI | GGNNCC | 1 cut(s) | 135 |
| BpuEI | CTTGAG | 1 cut(s) | 63 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 128 |
| Bse3DI | GCAATG | 1 cut(s) | 260 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 128 |
| BseMI | GCAATG | 1 cut(s) | 260 |
| BseXI | GCAGC | 2 cut(s) | 61, 237 |
| BshNI | GGYRCC | 1 cut(s) | 133 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 128 |
| Bsp143I | GATC | 1 cut(s) | 148 |
| BspLI | GGNNCC | 1 cut(s) | 135 |
| BspQI | GCTCTTC | 1 cut(s) | 12 |
| BspT107I | GGYRCC | 1 cut(s) | 133 |
| BsrDI | GCAATG | 1 cut(s) | 260 |
| BssMI | GATC | 1 cut(s) | 148 |
| Bst6I | CTCTTC | 1 cut(s) | 12 |
| BstDEI | CTNAG | 1 cut(s) | 70 |
| BstKTI | GATC | 1 cut(s) | 151 |
| BstMBI | GATC | 1 cut(s) | 148 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 264 |
| BstSFI | CTRYAG | 1 cut(s) | 167 |
| BstV1I | GCAGC | 2 cut(s) | 61, 237 |
| Csp6I | GTAC | 1 cut(s) | 134 |
| CviAII | CATG | 1 cut(s) | 202 |
| CviJI | RGCY | 5 cut(s) | 5, 74, 95, 121, 224 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 74, 95, 121, 224 |
| CviQI | GTAC | 1 cut(s) | 134 |
| DdeI | CTNAG | 1 cut(s) | 70 |
| DpnI | GATC | 1 cut(s) | 150 |
| DpnII | GATC | 1 cut(s) | 148 |
| Eam1104I | CTCTTC | 1 cut(s) | 12 |
| EarI | CTCTTC | 1 cut(s) | 12 |
| FaeI | CATG | 1 cut(s) | 205 |
| FaiI | YATR | 8 cut(s) | 99, 108, 110, 140, 156, 158, 164, 203 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 197, 229 |
| FatI | CATG | 1 cut(s) | 201 |
| FauNDI | CATATG | 1 cut(s) | 156 |
| Fnu4HI | GCNGC | 2 cut(s) | 75, 251 |
| Fsp4HI | GCNGC | 2 cut(s) | 75, 251 |
| GluI | GCNGC | 2 cut(s) | 75, 251 |
| Hin1II | CATG | 1 cut(s) | 205 |
| Hpy188III | TCNNGA | 1 cut(s) | 80 |
| HpyAV | CCTTC | 1 cut(s) | 32 |
| HpyCH4V | TGCA | 3 cut(s) | 39, 199, 253 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 264 |
| HpyF3I | CTNAG | 1 cut(s) | 70 |
| Hsp92II | CATG | 1 cut(s) | 205 |
| KpnI | GGTACC | 1 cut(s) | 137 |
| Kzo9I | GATC | 1 cut(s) | 148 |
| LguI | GCTCTTC | 1 cut(s) | 12 |
| LpnPI | CCDG | 2 cut(s) | 155, 159 |
| Lsp1109I | GCAGC | 2 cut(s) | 61, 237 |
| MaeIII | GTNAC | 1 cut(s) | 61 |
| MalI | GATC | 1 cut(s) | 150 |
| MboI | GATC | 1 cut(s) | 148 |
| MboII | GAAGA | 3 cut(s) | 143, 205, 208 |
| MnlI | CCTC | 1 cut(s) | 41 |
| MroXI | GAANNNNTTC | 1 cut(s) | 209 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 264 |
| NdeI | CATATG | 1 cut(s) | 156 |
| NdeII | GATC | 1 cut(s) | 148 |
| NlaIII | CATG | 1 cut(s) | 205 |
| NlaIV | GGNNCC | 1 cut(s) | 135 |
| PciSI | GCTCTTC | 1 cut(s) | 12 |
| PdmI | GAANNNNTTC | 1 cut(s) | 209 |
| PkrI | GCNGC | 2 cut(s) | 76, 252 |
| PspN4I | GGNNCC | 1 cut(s) | 135 |
| RsaI | GTAC | 1 cut(s) | 135 |
| RsaNI | GTAC | 1 cut(s) | 134 |
| SapI | GCTCTTC | 1 cut(s) | 12 |
| SatI | GCNGC | 2 cut(s) | 75, 251 |
| Sau3AI | GATC | 1 cut(s) | 148 |
| SetI | ASST | 4 cut(s) | 33, 76, 148, 226 |
| SfcI | CTRYAG | 1 cut(s) | 167 |
| SmlI | CTYRAG | 1 cut(s) | 78 |
| SmoI | CTYRAG | 1 cut(s) | 78 |
| TaqI | TCGA | 2 cut(s) | 10, 57 |
| TseI | GCWGC | 2 cut(s) | 74, 250 |
| TspDTI | ATGAA | 3 cut(s) | 143, 173, 218 |
| XmnI | GAANNNNTTC | 1 cut(s) | 209 |