No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0325921 |
| rosa_laevigata | RLG00000013895 RLG00000016549 RLG00000027113 |
| rosa_multiflora | Rmu_co8145310.1_g000001 Rmu_sc0003683.1_g000004 Rmu_sc0013657.1_g000015 |
| rosa_roxburghii | Rroxscaffold_4G00309930 |
| rosa_rugosa | Rorug04G0112300 |
| rosa_samantha | Rh1AG072200 Rh1AG072500 Rh1BG155700 Rh1BG323700 Rh1CG174700 Rh1CG336900 Rh1CG339700 Rh1DG076500 Rh1DG076900 Rh1DG103000 Rh1DG187300 Rh1DG347100 Rh1DG349600 Rh1DG350900 Rh1DG354300 Rh1DG356800 Rh4AG068100 Rh4AG068200 Rh4BG066600 Rh4CG073800 Rh4DG063600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 4 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AcsI | RAATTY | 2 cut(s) | 93, 127 |
| AfaI | GTAC | 2 cut(s) | 6, 18 |
| AoxI | GGCC | 1 cut(s) | 103 |
| ApoI | RAATTY | 2 cut(s) | 93, 127 |
| Asp718I | GGTACC | 1 cut(s) | 4 |
| AspA2I | CCTAGG | 1 cut(s) | 62 |
| AspS9I | GGNCC | 2 cut(s) | 22, 58 |
| AsuC2I | CCSGG | 1 cut(s) | 56 |
| AvaII | GGWCC | 2 cut(s) | 22, 58 |
| AvrII | CCTAGG | 1 cut(s) | 62 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 31 |
| BcnI | CCSGG | 1 cut(s) | 56 |
| BfaI | CTAG | 3 cut(s) | 44, 50, 63 |
| BlnI | CCTAGG | 1 cut(s) | 62 |
| BmcAI | AGTACT | 1 cut(s) | 18 |
| Bme1390I | CCNGG | 1 cut(s) | 56 |
| Bme18I | GGWCC | 2 cut(s) | 22, 58 |
| BmgT120I | GGNCC | 2 cut(s) | 22, 58 |
| BmiI | GGNNCC | 2 cut(s) | 6, 60 |
| BmrFI | CCNGG | 1 cut(s) | 56 |
| BpuMI | CCSGG | 1 cut(s) | 56 |
| BsaJI | CCNNGG | 1 cut(s) | 62 |
| Bse1I | ACTGG | 1 cut(s) | 24 |
| BseDI | CCNNGG | 1 cut(s) | 62 |
| BseNI | ACTGG | 1 cut(s) | 24 |
| BseRI | GAGGAG | 1 cut(s) | 95 |
| BshFI | GGCC | 1 cut(s) | 105 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiSI | CCGG | 1 cut(s) | 56 |
| BslFI | GGGAC | 2 cut(s) | 38, 44 |
| BsmFI | GGGAC | 2 cut(s) | 38, 44 |
| BsnI | GGCC | 1 cut(s) | 105 |
| Bsp1286I | GDGCHC | 1 cut(s) | 31 |
| BspANI | GGCC | 1 cut(s) | 105 |
| BspLI | GGNNCC | 2 cut(s) | 6, 60 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BsrI | ACTGG | 1 cut(s) | 24 |
| BssECI | CCNNGG | 1 cut(s) | 62 |
| BssT1I | CCWWGG | 1 cut(s) | 62 |
| BstSCI | CCNGG | 1 cut(s) | 54 |
| BsuRI | GGCC | 1 cut(s) | 105 |
| Cfr13I | GGNCC | 2 cut(s) | 22, 58 |
| Csp6I | GTAC | 2 cut(s) | 5, 17 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 95, 130 |
| CviJI | RGCY | 2 cut(s) | 29, 105 |
| CviKI_1 | RGCY | 2 cut(s) | 29, 105 |
| CviQI | GTAC | 2 cut(s) | 5, 17 |
| Eco130I | CCWWGG | 1 cut(s) | 62 |
| Eco24I | GRGCYC | 1 cut(s) | 31 |
| Eco47I | GGWCC | 2 cut(s) | 22, 58 |
| EcoT14I | CCWWGG | 1 cut(s) | 62 |
| EcoT38I | GRGCYC | 1 cut(s) | 31 |
| ErhI | CCWWGG | 1 cut(s) | 62 |
| FaqI | GGGAC | 2 cut(s) | 38, 44 |
| FriOI | GRGCYC | 1 cut(s) | 31 |
| FspBI | CTAG | 3 cut(s) | 44, 50, 63 |
| HaeIII | GGCC | 1 cut(s) | 105 |
| HapII | CCGG | 1 cut(s) | 56 |
| HpaII | CCGG | 1 cut(s) | 56 |
| Hpy188I | TCNGA | 2 cut(s) | 26, 77 |
| HpyAV | CCTTC | 1 cut(s) | 80 |
| HpyCH4V | TGCA | 1 cut(s) | 134 |
| KpnI | GGTACC | 1 cut(s) | 8 |
| LpnPI | CCDG | 2 cut(s) | 5, 69 |
| MaeI | CTAG | 3 cut(s) | 44, 50, 63 |
| MboII | GAAGA | 1 cut(s) | 164 |
| MhlI | GDGCHC | 1 cut(s) | 31 |
| MluCI | AATT | 4 cut(s) | 93, 127, 155, 199 |
| MnlI | CCTC | 2 cut(s) | 73, 76 |
| MspI | CCGG | 1 cut(s) | 56 |
| MspR9I | CCNGG | 1 cut(s) | 56 |
| NciI | CCSGG | 1 cut(s) | 56 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 60 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 60 |
| PspPI | GGNCC | 2 cut(s) | 22, 58 |
| RsaI | GTAC | 2 cut(s) | 6, 18 |
| RsaNI | GTAC | 2 cut(s) | 5, 17 |
| Sau96I | GGNCC | 2 cut(s) | 22, 58 |
| ScaI | AGTACT | 1 cut(s) | 18 |
| ScrFI | CCNGG | 1 cut(s) | 56 |
| SduI | GDGCHC | 1 cut(s) | 31 |
| SetI | ASST | 2 cut(s) | 45, 116 |
| SgeI | CNNG | 9 cut(s) | 32, 38, 56, 62, 67, 68, 75, 113, 119 |
| SinI | GGWCC | 2 cut(s) | 22, 58 |
| Sse9I | AATT | 4 cut(s) | 93, 127, 155, 199 |
| SspMI | CTAG | 3 cut(s) | 44, 50, 63 |
| StyD4I | CCNGG | 1 cut(s) | 54 |
| StyI | CCWWGG | 1 cut(s) | 62 |
| TasI | AATT | 4 cut(s) | 93, 127, 155, 199 |
| TatI | WGTACW | 1 cut(s) | 16 |
| VpaK11BI | GGWCC | 2 cut(s) | 22, 58 |
| XapI | RAATTY | 2 cut(s) | 93, 127 |
| XmaJI | CCTAGG | 1 cut(s) | 62 |
| XspI | CTAG | 3 cut(s) | 44, 50, 63 |
| ZrmI | AGTACT | 1 cut(s) | 18 |