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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0325921 |
| rosa_laevigata | RLG00000013895 RLG00000016549 RLG00000027113 |
| rosa_multiflora | Rmu_co8145310.1_g000001 Rmu_sc0003683.1_g000004 Rmu_sc0013657.1_g000015 |
| rosa_roxburghii | Rroxscaffold_4G00309930 |
| rosa_rugosa | Rorug04G0112300 |
| rosa_samantha | Rh1AG072200 Rh1AG072500 Rh1BG155700 Rh1BG323700 Rh1CG174700 Rh1CG336900 Rh1CG339700 Rh1DG076500 Rh1DG076900 Rh1DG103000 Rh1DG187300 Rh1DG347100 Rh1DG349600 Rh1DG350900 Rh1DG354300 Rh1DG356800 Rh4AG068100 Rh4AG068200 Rh4BG066600 Rh4CG073800 Rh4DG063600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 7 cut(s) | 28, 195, 224, 244, 363, 379, 405 |
| AclWI | GGATC | 3 cut(s) | 46, 59, 267 |
| AcoI | YGGCCR | 1 cut(s) | 225 |
| AgsI | TTSAA | 1 cut(s) | 256 |
| AluBI | AGCT | 1 cut(s) | 238 |
| AluI | AGCT | 1 cut(s) | 238 |
| AlwI | GGATC | 3 cut(s) | 46, 59, 267 |
| AoxI | GGCC | 2 cut(s) | 225, 401 |
| ApeKI | GCWGC | 1 cut(s) | 328 |
| AspS9I | GGNCC | 1 cut(s) | 402 |
| AsuHPI | GGTGA | 1 cut(s) | 124 |
| BamHI | GGATCC | 1 cut(s) | 51 |
| BanII | GRGCYC | 1 cut(s) | 444 |
| BbvI | GCAGC | 1 cut(s) | 315 |
| BccI | CCATC | 5 cut(s) | 32, 135, 175, 197, 379 |
| BceAI | ACGGC | 2 cut(s) | 152, 212 |
| BfaI | CTAG | 2 cut(s) | 332, 451 |
| BglII | AGATCT | 1 cut(s) | 67 |
| BisI | GCNGC | 4 cut(s) | 225, 245, 329, 380 |
| BlsI | GCNGC | 4 cut(s) | 226, 246, 330, 381 |
| BmgT120I | GGNCC | 1 cut(s) | 402 |
| BmiI | GGNNCC | 2 cut(s) | 53, 441 |
| BmsI | GCATC | 1 cut(s) | 421 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 428 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 57, 87 |
| Bse118I | RCCGGY | 1 cut(s) | 267 |
| Bse1I | ACTGG | 1 cut(s) | 126 |
| BseGI | GGATG | 4 cut(s) | 11, 15, 43, 162 |
| BseNI | ACTGG | 1 cut(s) | 126 |
| BseRI | GAGGAG | 1 cut(s) | 452 |
| BseX3I | CGGCCG | 1 cut(s) | 225 |
| BseXI | GCAGC | 1 cut(s) | 315 |
| Bsh1285I | CGRYCG | 1 cut(s) | 228 |
| BshFI | GGCC | 2 cut(s) | 227, 403 |
| BsiEI | CGRYCG | 1 cut(s) | 228 |
| BsiSI | CCGG | 3 cut(s) | 268, 302, 408 |
| BsnI | GGCC | 2 cut(s) | 227, 403 |
| Bsp1286I | GDGCHC | 1 cut(s) | 444 |
| Bsp143I | GATC | 5 cut(s) | 51, 67, 259, 337, 357 |
| BspACI | CCGC | 7 cut(s) | 28, 195, 224, 244, 363, 379, 405 |
| BspANI | GGCC | 2 cut(s) | 227, 403 |
| BspLI | GGNNCC | 2 cut(s) | 53, 441 |
| BspPI | GGATC | 3 cut(s) | 46, 59, 267 |
| BsrFI | RCCGGY | 1 cut(s) | 267 |
| BsrI | ACTGG | 1 cut(s) | 126 |
| BssAI | RCCGGY | 1 cut(s) | 267 |
| BssMI | GATC | 5 cut(s) | 51, 67, 259, 337, 357 |
| BstC8I | GCNNGC | 2 cut(s) | 401, 405 |
| BstF5I | GGATG | 4 cut(s) | 11, 15, 43, 162 |
| BstKTI | GATC | 5 cut(s) | 54, 70, 262, 340, 360 |
| BstMBI | GATC | 5 cut(s) | 51, 67, 259, 337, 357 |
| BstMCI | CGRYCG | 1 cut(s) | 228 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 244 |
| BstV1I | GCAGC | 1 cut(s) | 315 |
| BstX2I | RGATCY | 2 cut(s) | 51, 67 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 422 |
| BstYI | RGATCY | 2 cut(s) | 51, 67 |
| BstZI | CGGCCG | 1 cut(s) | 225 |
| BsuRI | GGCC | 2 cut(s) | 227, 403 |
| BtgZI | GCGATG | 2 cut(s) | 154, 216 |
| BtsCI | GGATG | 4 cut(s) | 11, 15, 43, 162 |
| BtsIMutI | CAGTG | 3 cut(s) | 133, 196, 269 |
| Cac8I | GCNNGC | 2 cut(s) | 401, 405 |
| Cfr10I | RCCGGY | 1 cut(s) | 267 |
| Cfr13I | GGNCC | 1 cut(s) | 402 |
| CviAII | CATG | 1 cut(s) | 416 |
| CviJI | RGCY | 8 cut(s) | 18, 99, 185, 227, 238, 382, 403, 442 |
| CviKI_1 | RGCY | 8 cut(s) | 18, 99, 185, 227, 238, 382, 403, 442 |
| DpnI | GATC | 5 cut(s) | 53, 69, 261, 339, 359 |
| DpnII | GATC | 5 cut(s) | 51, 67, 259, 337, 357 |
| EaeI | YGGCCR | 1 cut(s) | 225 |
| EagI | CGGCCG | 1 cut(s) | 225 |
| EclXI | CGGCCG | 1 cut(s) | 225 |
| Eco24I | GRGCYC | 1 cut(s) | 444 |
| Eco52I | CGGCCG | 1 cut(s) | 225 |
| EcoT38I | GRGCYC | 1 cut(s) | 444 |
| FaeI | CATG | 1 cut(s) | 419 |
| FaiI | YATR | 2 cut(s) | 25, 417 |
| FatI | CATG | 1 cut(s) | 415 |
| FauI | CCCGC | 1 cut(s) | 412 |
| Fnu4HI | GCNGC | 4 cut(s) | 225, 245, 329, 380 |
| FokI | GGATG | 4 cut(s) | 18, 22, 50, 169 |
| FriOI | GRGCYC | 1 cut(s) | 444 |
| Fsp4HI | GCNGC | 4 cut(s) | 225, 245, 329, 380 |
| FspBI | CTAG | 2 cut(s) | 332, 451 |
| GluI | GCNGC | 4 cut(s) | 225, 245, 329, 380 |
| HaeIII | GGCC | 2 cut(s) | 227, 403 |
| HapII | CCGG | 3 cut(s) | 268, 302, 408 |
| Hin1II | CATG | 1 cut(s) | 419 |
| HincII | GTYRAC | 1 cut(s) | 123 |
| HindII | GTYRAC | 1 cut(s) | 123 |
| HpaII | CCGG | 3 cut(s) | 268, 302, 408 |
| HphI | GGTGA | 1 cut(s) | 124 |
| Hpy166II | GTNNAC | 1 cut(s) | 123 |
| Hpy8I | GTNNAC | 1 cut(s) | 123 |
| Hpy99I | CGWCG | 1 cut(s) | 285 |
| HpyAV | CCTTC | 1 cut(s) | 250 |
| HpyCH4V | TGCA | 1 cut(s) | 434 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 244 |
| Hsp92II | CATG | 1 cut(s) | 419 |
| Kzo9I | GATC | 5 cut(s) | 51, 67, 259, 337, 357 |
| LmnI | GCTCC | 2 cut(s) | 315, 439 |
| Lsp1109I | GCAGC | 1 cut(s) | 315 |
| LweI | GCATC | 1 cut(s) | 421 |
| MaeI | CTAG | 2 cut(s) | 332, 451 |
| MalI | GATC | 5 cut(s) | 53, 69, 261, 339, 359 |
| MboI | GATC | 5 cut(s) | 51, 67, 259, 337, 357 |
| MflI | RGATCY | 2 cut(s) | 51, 67 |
| MhlI | GDGCHC | 1 cut(s) | 444 |
| MnlI | CCTC | 3 cut(s) | 8, 108, 430 |
| MslI | CAYNNNNRTG | 1 cut(s) | 420 |
| MspI | CCGG | 3 cut(s) | 268, 302, 408 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 244 |
| NdeII | GATC | 5 cut(s) | 51, 67, 259, 337, 357 |
| NlaIII | CATG | 1 cut(s) | 419 |
| NlaIV | GGNNCC | 2 cut(s) | 53, 441 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 142 |
| PkrI | GCNGC | 4 cut(s) | 226, 246, 330, 381 |
| PspN4I | GGNNCC | 2 cut(s) | 53, 441 |
| PspPI | GGNCC | 1 cut(s) | 402 |
| PsuI | RGATCY | 2 cut(s) | 51, 67 |
| RseI | CAYNNNNRTG | 1 cut(s) | 420 |
| SatI | GCNGC | 4 cut(s) | 225, 245, 329, 380 |
| Sau3AI | GATC | 5 cut(s) | 51, 67, 259, 337, 357 |
| Sau96I | GGNCC | 1 cut(s) | 402 |
| SduI | GDGCHC | 1 cut(s) | 444 |
| SetI | ASST | 2 cut(s) | 119, 240 |
| SfaNI | GCATC | 1 cut(s) | 421 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 420 |
| SsiI | CCGC | 7 cut(s) | 28, 195, 224, 244, 363, 379, 405 |
| SspMI | CTAG | 2 cut(s) | 332, 451 |
| TaqI | TCGA | 1 cut(s) | 84 |
| TauI | GCSGC | 3 cut(s) | 227, 247, 382 |
| TscAI | CASTG | 3 cut(s) | 133, 196, 269 |
| TseI | GCWGC | 1 cut(s) | 328 |
| TspDTI | ATGAA | 1 cut(s) | 361 |
| TspGWI | ACGGA | 1 cut(s) | 44 |
| TspRI | CASTG | 3 cut(s) | 133, 196, 269 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 422 |
| XspI | CTAG | 2 cut(s) | 332, 451 |