Nuclear transcription factor Y subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g38381 |
| malus_domestica | MD12G1102200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0377901 RchiOBHm_Chr3g0473411 RchiOBHm_Chr4g0394851 RchiOBHm_Chr5g0072821 |
| rosa_laevigata | RLG00000024152 RLG00000029359 |
| rosa_multiflora | Rmu_sc0000161.1_g000006 Rmu_sc0000762.1_g000046 Rmu_sc0001477.1_g000010 Rmu_sc0002503.1_g000021 Rmu_sc0002532.1_g000002 Rmu_sc0004618.1_g000047 Rmu_sc0005220.1_g000041 Rmu_sc0006417.1_g000008 Rmu_sc0009354.1_g000001 Rmu_sc0019463.1_g000004 Rmu_sc0041104.1_g000001 |
| rosa_rugosa | Rorug03G0313500 Rorug05G0228100 Rorug05G0457800 |
| rosa_samantha | Rh2CG275800 Rh3CG276600 Rh5AG038300 Rh5CG040900 Rh6AG379500 Rh7BG387300 Rh7CG204200 |
| rosa_wichuraiana | Rw5G032780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 12, 63 |
| AcuI | CTGAAG | 1 cut(s) | 12 |
| AcyI | GRCGYC | 1 cut(s) | 133 |
| AjnI | CCWGG | 1 cut(s) | 148 |
| AlwI | GGATC | 2 cut(s) | 12, 63 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 35 |
| ApeKI | GCWGC | 1 cut(s) | 35 |
| AsuC2I | CCSGG | 1 cut(s) | 137 |
| BanII | GRGCYC | 1 cut(s) | 143 |
| BbsI | GAAGAC | 1 cut(s) | 136 |
| BbvI | GCAGC | 1 cut(s) | 22 |
| BccI | CCATC | 1 cut(s) | 112 |
| BciT130I | CCWGG | 1 cut(s) | 150 |
| BcnI | CCSGG | 1 cut(s) | 137 |
| BfmI | CTRYAG | 1 cut(s) | 95 |
| BisI | GCNGC | 1 cut(s) | 36 |
| BlsI | GCNGC | 1 cut(s) | 37 |
| Bme1390I | CCNGG | 2 cut(s) | 137, 150 |
| BmrFI | CCNGG | 2 cut(s) | 137, 150 |
| BmsI | GCATC | 1 cut(s) | 22 |
| BpiI | GAAGAC | 1 cut(s) | 136 |
| BpuMI | CCSGG | 1 cut(s) | 137 |
| BsaHI | GRCGYC | 1 cut(s) | 133 |
| BsaJI | CCNNGG | 1 cut(s) | 136 |
| BseBI | CCWGG | 1 cut(s) | 150 |
| BseDI | CCNNGG | 1 cut(s) | 136 |
| BseXI | GCAGC | 1 cut(s) | 22 |
| BsiSI | CCGG | 1 cut(s) | 136 |
| Bsp1286I | GDGCHC | 1 cut(s) | 143 |
| Bsp143I | GATC | 2 cut(s) | 4, 55 |
| BspMAI | CTGCAG | 1 cut(s) | 99 |
| BspPI | GGATC | 2 cut(s) | 12, 63 |
| BssECI | CCNNGG | 1 cut(s) | 136 |
| BssMI | GATC | 2 cut(s) | 4, 55 |
| BssNI | GRCGYC | 1 cut(s) | 133 |
| Bst2UI | CCWGG | 1 cut(s) | 150 |
| BstACI | GRCGYC | 1 cut(s) | 133 |
| BstKTI | GATC | 2 cut(s) | 7, 58 |
| BstMBI | GATC | 2 cut(s) | 4, 55 |
| BstNI | CCWGG | 1 cut(s) | 150 |
| BstSCI | CCNGG | 2 cut(s) | 135, 148 |
| BstSFI | CTRYAG | 1 cut(s) | 95 |
| BstV1I | GCAGC | 1 cut(s) | 22 |
| BstV2I | GAAGAC | 1 cut(s) | 136 |
| BstX2I | RGATCY | 1 cut(s) | 55 |
| BstYI | RGATCY | 1 cut(s) | 55 |
| CaiI | CAGNNNCTG | 1 cut(s) | 35 |
| CseI | GACGC | 1 cut(s) | 141 |
| CviJI | RGCY | 1 cut(s) | 141 |
| CviKI_1 | RGCY | 1 cut(s) | 141 |
| DpnI | GATC | 2 cut(s) | 6, 57 |
| DpnII | GATC | 2 cut(s) | 4, 55 |
| Eco24I | GRGCYC | 1 cut(s) | 143 |
| Eco57I | CTGAAG | 1 cut(s) | 12 |
| EcoRII | CCWGG | 1 cut(s) | 148 |
| EcoT38I | GRGCYC | 1 cut(s) | 143 |
| Fnu4HI | GCNGC | 1 cut(s) | 36 |
| FriOI | GRGCYC | 1 cut(s) | 143 |
| Fsp4HI | GCNGC | 1 cut(s) | 36 |
| GluI | GCNGC | 1 cut(s) | 36 |
| HapII | CCGG | 1 cut(s) | 136 |
| HgaI | GACGC | 1 cut(s) | 141 |
| Hin1I | GRCGYC | 1 cut(s) | 133 |
| HinfI | GANTC | 2 cut(s) | 20, 91 |
| HpaII | CCGG | 1 cut(s) | 136 |
| Hpy188I | TCNGA | 3 cut(s) | 19, 31, 76 |
| Hpy188III | TCNNGA | 1 cut(s) | 155 |
| HpyCH4V | TGCA | 2 cut(s) | 38, 97 |
| Hsp92I | GRCGYC | 1 cut(s) | 133 |
| Kzo9I | GATC | 2 cut(s) | 4, 55 |
| LpnPI | CCDG | 2 cut(s) | 135, 149 |
| Lsp1109I | GCAGC | 1 cut(s) | 22 |
| LweI | GCATC | 1 cut(s) | 22 |
| MalI | GATC | 2 cut(s) | 6, 57 |
| MboI | GATC | 2 cut(s) | 4, 55 |
| MboII | GAAGA | 5 cut(s) | 18, 92, 135, 138, 141 |
| MflI | RGATCY | 1 cut(s) | 55 |
| MhlI | GDGCHC | 1 cut(s) | 143 |
| MluCI | AATT | 4 cut(s) | 64, 83, 144, 160 |
| MnlI | CCTC | 1 cut(s) | 37 |
| MspI | CCGG | 1 cut(s) | 136 |
| MspR9I | CCNGG | 2 cut(s) | 137, 150 |
| MvaI | CCWGG | 1 cut(s) | 150 |
| NciI | CCSGG | 1 cut(s) | 137 |
| NdeII | GATC | 2 cut(s) | 4, 55 |
| PfeI | GAWTC | 2 cut(s) | 20, 91 |
| PkrI | GCNGC | 1 cut(s) | 37 |
| Psp6I | CCWGG | 1 cut(s) | 148 |
| PspGI | CCWGG | 1 cut(s) | 148 |
| PstI | CTGCAG | 1 cut(s) | 99 |
| PstNI | CAGNNNCTG | 1 cut(s) | 35 |
| PsuI | RGATCY | 1 cut(s) | 55 |
| SatI | GCNGC | 1 cut(s) | 36 |
| Sau3AI | GATC | 2 cut(s) | 4, 55 |
| ScrFI | CCNGG | 2 cut(s) | 137, 150 |
| SduI | GDGCHC | 1 cut(s) | 143 |
| SfaNI | GCATC | 1 cut(s) | 22 |
| SfcI | CTRYAG | 1 cut(s) | 95 |
| SgeI | CNNG | 5 cut(s) | 71, 125, 148, 149, 161 |
| SmlI | CTYRAG | 1 cut(s) | 155 |
| SmoI | CTYRAG | 1 cut(s) | 155 |
| Sse9I | AATT | 4 cut(s) | 64, 83, 144, 160 |
| StyD4I | CCNGG | 2 cut(s) | 135, 148 |
| TasI | AATT | 4 cut(s) | 64, 83, 144, 160 |
| TfiI | GAWTC | 2 cut(s) | 20, 91 |
| TseI | GCWGC | 1 cut(s) | 35 |
| TspDTI | ATGAA | 3 cut(s) | 12, 57, 104 |