Nuclear transcription factor Y subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g38381 |
| malus_domestica | MD12G1102200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0377901 RchiOBHm_Chr3g0473411 RchiOBHm_Chr4g0394851 RchiOBHm_Chr5g0072821 |
| rosa_laevigata | RLG00000024152 RLG00000029359 |
| rosa_multiflora | Rmu_sc0000161.1_g000006 Rmu_sc0000762.1_g000046 Rmu_sc0001477.1_g000010 Rmu_sc0002503.1_g000021 Rmu_sc0002532.1_g000002 Rmu_sc0004618.1_g000047 Rmu_sc0005220.1_g000041 Rmu_sc0006417.1_g000008 Rmu_sc0009354.1_g000001 Rmu_sc0019463.1_g000004 Rmu_sc0041104.1_g000001 |
| rosa_rugosa | Rorug03G0313500 Rorug05G0228100 Rorug05G0457800 |
| rosa_samantha | Rh2CG275800 Rh3CG276600 Rh5AG038300 Rh5CG040900 Rh6AG379500 Rh7BG387300 Rh7CG204200 |
| rosa_wichuraiana | Rw5G032780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 388 |
| AclWI | GGATC | 1 cut(s) | 264 |
| AcsI | RAATTY | 5 cut(s) | 83, 222, 299, 343, 421 |
| AcuI | CTGAAG | 1 cut(s) | 264 |
| AcvI | CACGTG | 1 cut(s) | 53 |
| AcyI | GRCGYC | 1 cut(s) | 385 |
| AflIII | ACRYGT | 1 cut(s) | 50 |
| AgsI | TTSAA | 2 cut(s) | 202, 241 |
| AjnI | CCWGG | 1 cut(s) | 400 |
| AlwI | GGATC | 1 cut(s) | 264 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 287, 401 |
| ApeKI | GCWGC | 1 cut(s) | 287 |
| ApoI | RAATTY | 5 cut(s) | 83, 222, 299, 343, 421 |
| AsuHPI | GGTGA | 2 cut(s) | 159, 181 |
| BanII | GRGCYC | 1 cut(s) | 395 |
| BbrPI | CACGTG | 1 cut(s) | 53 |
| BbsI | GAAGAC | 1 cut(s) | 388 |
| BbvI | GCAGC | 1 cut(s) | 274 |
| BciT130I | CCWGG | 1 cut(s) | 402 |
| BclI | TGATCA | 1 cut(s) | 444 |
| BfaI | CTAG | 1 cut(s) | 438 |
| BisI | GCNGC | 1 cut(s) | 288 |
| BlsI | GCNGC | 1 cut(s) | 289 |
| Bme1390I | CCNGG | 1 cut(s) | 402 |
| BmrFI | CCNGG | 1 cut(s) | 402 |
| BmsI | GCATC | 4 cut(s) | 155, 254, 274, 451 |
| BpiI | GAAGAC | 1 cut(s) | 388 |
| BsaAI | YACGTR | 1 cut(s) | 53 |
| BsaHI | GRCGYC | 1 cut(s) | 385 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 142, 172 |
| Bse1I | ACTGG | 1 cut(s) | 251 |
| BseBI | CCWGG | 1 cut(s) | 402 |
| BseMII | CTCAG | 3 cut(s) | 282, 408, 470 |
| BseNI | ACTGG | 1 cut(s) | 251 |
| BseRI | GAGGAG | 1 cut(s) | 64 |
| BseXI | GCAGC | 1 cut(s) | 274 |
| Bsp1286I | GDGCHC | 1 cut(s) | 395 |
| Bsp143I | GATC | 2 cut(s) | 256, 444 |
| BspCNI | CTCAG | 3 cut(s) | 281, 407, 471 |
| BspPI | GGATC | 1 cut(s) | 264 |
| BsrI | ACTGG | 1 cut(s) | 251 |
| BssMI | GATC | 2 cut(s) | 256, 444 |
| BssNI | GRCGYC | 1 cut(s) | 385 |
| Bst2UI | CCWGG | 1 cut(s) | 402 |
| Bst4CI | ACNGT | 2 cut(s) | 171, 454 |
| Bst6I | CTCTTC | 3 cut(s) | 31, 101, 239 |
| BstACI | GRCGYC | 1 cut(s) | 385 |
| BstBAI | YACGTR | 1 cut(s) | 53 |
| BstDEI | CTNAG | 3 cut(s) | 268, 394, 479 |
| BstKTI | GATC | 2 cut(s) | 259, 447 |
| BstMBI | GATC | 2 cut(s) | 256, 444 |
| BstNI | CCWGG | 1 cut(s) | 402 |
| BstNSI | RCATGY | 1 cut(s) | 216 |
| BstSCI | CCNGG | 1 cut(s) | 400 |
| BstV1I | GCAGC | 1 cut(s) | 274 |
| BstV2I | GAAGAC | 1 cut(s) | 388 |
| CaiI | CAGNNNCTG | 2 cut(s) | 287, 401 |
| CviAII | CATG | 2 cut(s) | 213, 253 |
| CviJI | RGCY | 3 cut(s) | 18, 93, 393 |
| CviKI_1 | RGCY | 3 cut(s) | 18, 93, 393 |
| DdeI | CTNAG | 3 cut(s) | 268, 394, 479 |
| DpnI | GATC | 2 cut(s) | 258, 446 |
| DpnII | GATC | 2 cut(s) | 256, 444 |
| Eam1104I | CTCTTC | 3 cut(s) | 31, 101, 239 |
| EarI | CTCTTC | 3 cut(s) | 31, 101, 239 |
| Eco24I | GRGCYC | 1 cut(s) | 395 |
| Eco57I | CTGAAG | 1 cut(s) | 264 |
| Eco72I | CACGTG | 1 cut(s) | 53 |
| EcoRII | CCWGG | 1 cut(s) | 400 |
| EcoT38I | GRGCYC | 1 cut(s) | 395 |
| FaeI | CATG | 2 cut(s) | 216, 256 |
| FaiI | YATR | 3 cut(s) | 214, 254, 362 |
| FatI | CATG | 2 cut(s) | 212, 252 |
| FbaI | TGATCA | 1 cut(s) | 444 |
| Fnu4HI | GCNGC | 1 cut(s) | 288 |
| FriOI | GRGCYC | 1 cut(s) | 395 |
| Fsp4HI | GCNGC | 1 cut(s) | 288 |
| FspBI | CTAG | 1 cut(s) | 438 |
| GluI | GCNGC | 1 cut(s) | 288 |
| Hin1I | GRCGYC | 1 cut(s) | 385 |
| Hin1II | CATG | 2 cut(s) | 216, 256 |
| HinfI | GANTC | 3 cut(s) | 151, 272, 307 |
| HphI | GGTGA | 2 cut(s) | 159, 181 |
| Hpy188I | TCNGA | 4 cut(s) | 271, 283, 328, 460 |
| Hpy188III | TCNNGA | 1 cut(s) | 238 |
| Hpy99I | CGWCG | 1 cut(s) | 390 |
| HpyAV | CCTTC | 1 cut(s) | 191 |
| HpyCH4III | ACNGT | 2 cut(s) | 171, 454 |
| HpyCH4IV | ACGT | 2 cut(s) | 52, 385 |
| HpyCH4V | TGCA | 6 cut(s) | 146, 212, 220, 349, 427, 464 |
| HpyF3I | CTNAG | 3 cut(s) | 268, 394, 479 |
| HpySE526I | ACGT | 2 cut(s) | 52, 385 |
| Hsp92I | GRCGYC | 1 cut(s) | 385 |
| Hsp92II | CATG | 2 cut(s) | 216, 256 |
| Ksp22I | TGATCA | 1 cut(s) | 444 |
| Kzo9I | GATC | 2 cut(s) | 256, 444 |
| LpnPI | CCDG | 3 cut(s) | 232, 387, 414 |
| Lsp1109I | GCAGC | 1 cut(s) | 274 |
| LweI | GCATC | 4 cut(s) | 155, 254, 274, 451 |
| MaeI | CTAG | 1 cut(s) | 438 |
| MaeII | ACGT | 2 cut(s) | 52, 385 |
| MalI | GATC | 2 cut(s) | 258, 446 |
| MboI | GATC | 2 cut(s) | 256, 444 |
| MhlI | GDGCHC | 1 cut(s) | 395 |
| MluCI | AATT | 9 cut(s) | 83, 114, 222, 241, 299, 316, 335, 343, 421 |
| MlyI | GAGTC | 1 cut(s) | 145 |
| MmeI | TCCRAC | 1 cut(s) | 56 |
| MnlI | CCTC | 3 cut(s) | 85, 104, 325 |
| MseI | TTAA | 2 cut(s) | 5, 113 |
| MspR9I | CCNGG | 1 cut(s) | 402 |
| MvaI | CCWGG | 1 cut(s) | 402 |
| NdeII | GATC | 2 cut(s) | 256, 444 |
| NlaIII | CATG | 2 cut(s) | 216, 256 |
| NspI | RCATGY | 1 cut(s) | 216 |
| PfeI | GAWTC | 2 cut(s) | 272, 307 |
| PkrI | GCNGC | 1 cut(s) | 289 |
| PleI | GAGTC | 1 cut(s) | 145 |
| PmaCI | CACGTG | 1 cut(s) | 53 |
| PmlI | CACGTG | 1 cut(s) | 53 |
| PpsI | GAGTC | 1 cut(s) | 145 |
| Ppu21I | YACGTR | 1 cut(s) | 53 |
| Psp6I | CCWGG | 1 cut(s) | 400 |
| PspCI | CACGTG | 1 cut(s) | 53 |
| PspGI | CCWGG | 1 cut(s) | 400 |
| PstNI | CAGNNNCTG | 2 cut(s) | 287, 401 |
| SaqAI | TTAA | 2 cut(s) | 5, 113 |
| SatI | GCNGC | 1 cut(s) | 288 |
| Sau3AI | GATC | 2 cut(s) | 256, 444 |
| SchI | GAGTC | 1 cut(s) | 145 |
| ScrFI | CCNGG | 1 cut(s) | 402 |
| SduI | GDGCHC | 1 cut(s) | 395 |
| SetI | ASST | 2 cut(s) | 55, 388 |
| SfaNI | GCATC | 4 cut(s) | 155, 254, 274, 451 |
| Sse9I | AATT | 9 cut(s) | 83, 114, 222, 241, 299, 316, 335, 343, 421 |
| SspI | AATATT | 1 cut(s) | 9 |
| SspMI | CTAG | 1 cut(s) | 438 |
| StyD4I | CCNGG | 1 cut(s) | 400 |
| TaaI | ACNGT | 2 cut(s) | 171, 454 |
| TaiI | ACGT | 2 cut(s) | 55, 388 |
| TaqI | TCGA | 1 cut(s) | 149 |
| TasI | AATT | 9 cut(s) | 83, 114, 222, 241, 299, 316, 335, 343, 421 |
| TfiI | GAWTC | 2 cut(s) | 272, 307 |
| Tru1I | TTAA | 2 cut(s) | 5, 113 |
| Tru9I | TTAA | 2 cut(s) | 5, 113 |
| TseI | GCWGC | 1 cut(s) | 287 |
| TspDTI | ATGAA | 6 cut(s) | 173, 264, 309, 309, 356, 434 |
| XapI | RAATTY | 5 cut(s) | 83, 222, 299, 343, 421 |
| XceI | RCATGY | 1 cut(s) | 216 |
| XspI | CTAG | 1 cut(s) | 438 |
| ZraI | GACGTC | 1 cut(s) | 386 |