RchiOBHm_Chr2g0122661

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
35684025 .. 35688108
4084 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ49503

Sequence Viewer

Length: 3060 bp
ATGGAAGAAGCTGCTAAGCTTCACATAGAAGATATTCGGACCCAGAAATATTCTATTGGTAAAGACGAAGCTAATCCCTTAGGCAAAGATCTTCATGGAGCCCTGACCAACATCTCAAAAGATGCGAACTTTTTGAGGGAACTCATCCTGAATGCAGAAGAAAATGAGTATGAAGAAGATGCAGTGCCAGAGCTGAAATTTGTGTTGACCAAGAAAGACATAACTGAGACTGGAGCACCAGCTACTCTGTTGGTTTTCAATAATGAAGTCGGCTTTTCCAGGGAGAACATGGAGTCTATTTGCGGCATATTCCATTCTACAAAGAAAGGGAAGAGACAGCAAAGGCTTATTGAAGAGAATGGAAGTGGATTCAAAAGTGTATTTCTTGTGAGTTCACAGCCTTACATTTTCAGCAATGGATATCGTGTCAGATTCCAGGAAGAACCAGATCAAGATTGTGGTATTGGGTATATAGTTCCCCAGTGGGTGAGTGGACATCCTTCTCTTTCTAGCATATATGATGTATATGGGCTCAGTAATGCATACCCTGCAACCACAATTATCCTTCCTCTAAAGCCTGAGATGGTTGAAGTCGTGAGAGAGCAATTGTCACAGTTGTGCCCGGAGATTATCCTGTTCTTATTGAAGTTAAAGCGACTACATGTACATGACTATGATCCTGAAGTAGCTGATAGAGTCTCAAGCTTTCTTATATCTAGTGTGACTAAACACAAGGAGGTTTCTTCACGTGTGGTTCAACTTTCAAAGAAAAACTTGGATGGTATTGAGGAATCGTGCGATTATTACTTGTGGGAAAAGACATTTCCTGTGAAACCTGAGAATAGATTTGGTGTCAGGATGGATGTGCAGAGCTGGGTGATTACCATTGCTTTCCCATCTGGAGAAAGGATGAGAACGGCAACTTCTGCTGTTGGTATATTTGCTTTCCTCCCCACGACAATGGTCACAGACTTCCCGTTCCTAATTCAGGCTGACTTCATTCTTAATTCGTCACGAGATTCTATACTGTTGGATAATGTATGGAACTTGGGGATTCTCGAATGTATCCCATCAGCATTTGTGAATGCCTTTCAGTCTCACTCCTTGCGTTATCCAGTGGATAAGAGATTTGAATTTTTACCTGCTCAAGCTCCATCAATTCCCAAGTTTAAAGACTTAAGAGAGTCCATTAGAGCTGAATTGCAGGGTCTAGTGATAGTGCCTTGTGAAATTATTGAGGGTATGTCTTCCTCTGTGAGGCCTCAAGAGGCAGTTCGCGTCCTTCCGAACTTCAGGGACCTAGTGGGTGGATTTAAAATAGAAGGTTATGTTTTGAGCAGTTCATCAAAATATTTACTGAGGAGTGTCTTGCATCCGTCTGTGGACCTTGAAAAATACAATGCAGTTCTGGAGTTTCTAGGTGTGGAATTTGCTAACGACCATTGGTATACAGAATGCATCCAAAGGCTTTGCAGCTCAATTGATGAAAAGGTTACTGGAGCTGGCATTATTTCATTGCTAAAGTGCATCAAGAATCTGACGTCAAGCTCTCCTGATGATCCCTTACTGAGGGACTTAACCAACAGCATTGCAAGAAGAAAGTGTTTGAAGACCTCGGATTGGACAGATTCATACAAAACACCAGAAGAATCTATTCTGTTTGATCCAGCCTGGGAAAGTATTCTGGATCGGACAAAGATACCAACCATTGATGAGAACTTTTATGGAACTGATATTCTTGTATACAAGAATCAGTTAAGAGATATCGGTGTGAAGGTAGATCCTTTGAATGTTTGTTCTCTTCTTTCTGGGATTCTTTCTAAGCTGGCAAAGCCAGACGTTTATTTTGAAGAAACTTTCATAGAAATGATTTACACATTCCTGAACAAGTTCCAGTGGCGTCCAGAAGTGCCAGATGGAACCACACCTGTGTGGGTACCTGATCAGGGATGGTTTGCCCCTCAGCACTGTGTACTTCATGACAAAGAAAATCTGTTTCTGTCCTTCTTATGTGTGCTTGATGAACATTACAATGAAGAGCTCCTCCCCGTGTTTTCTTCAGCCTTTGGAGTTGCAGAGAATCCTTCTCTCGATCATTATGTAGATCTCTGGAACAAATGGAATGGGAAGGGCCAACTGACTCTGGAAGAGTACTGCTGCTCCTTCTGGAAGTATGTTGTAGACAACTGGAATCCAGAAGTTGAAGAGGCTTTAAAAGGTTTGACAAAACTACCTGCCACAAAGTCGATATCTGAGAAAGTATATCAGATCAACAGGAAAGAAGTATTCCTTGCTGATGACTTGCAACTGAAAAATGTTTTCTTGAGATATGATGAGGCTCCATTATTTGTGTGGTTTCCCAGGAACAACTGTTTGTGTACAAGAAGACTTTATGAGATTTATGAGTCCCTTGGAGTAAAAAAGGTTTCTGAATCAGTTCAGTACATACCATTTACCAAAATACTGTTGGATCCAGAGAAAGATGTATTAAATGGATTGATTAACAGGGGTTTAATCAAAATTATTCTGGGTTTTCTCGCTGGTTCGCAGGTTACTATGCCATTGGAAGATAGAAAAGATGCTGCATCCTCACTTGCTAGACTTAAGGTGTATAAGTTGGACAATCCATATGAATACATTTACAGACTAATGCAATCTGAGAGTACAAAAGCGGATGTGAAAAAAGTGAAGCTAGTTTCCTGGAAGAAGCGGTCTGAGCGGTTGTTCATTGATAGTTCAGGGTACAACAATGGAAAATCTGATCTAAAATTTGTTGCAGCTTTCGCTGACGAACTTGCTCAAGGACTGTTGGTGCAAGCAAAAGCAAGAGCAACATTGAGCAAGATCATCCAAATTGGGTTTTTGTCTGGTTTTAGTGAGAATGAAGTGGATGTCTTACTAATGGGAGAAAATTTAGAGTTGTCTGTGGAAGATAAGGAATTTCTTGATGCTGCATTCCCCTCATCAACTGTTCCTGGTCCTGTTTGTGGGAAGCGGTCATCTATGGAGAGAGATCAATCAGACCCTTCATCAACTACTTCAGGCAAGAAGCAGCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1019

Amino Acids

115.7

Weight (kDa)

5.32

Isoelectric Point (pI)

43.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1544
Acc36I ACCTGC 3 cut(s) 1150, 2242, 2539
Acc65I GGTACC 1 cut(s) 1936
AccB1I GGYRCC 1 cut(s) 1936
AccBSI CCGCTC 1 cut(s) 2719
AccI GTMKAC 3 cut(s) 1448, 1743, 2181
AccII CGCG 1 cut(s) 1278
AciI CCGC 5 cut(s) 303, 2672, 2710, 2719, 2995
AclWI GGATC 7 cut(s) 671, 1553, 1658, 1695, 1775, 2465, 2478
AcsI RAATTY 6 cut(s) 197, 1133, 1427, 2768, 2911, 2939
AcuI CTGAAG 4 cut(s) 702, 1276, 2043, 3024
AcvI CACGTG 1 cut(s) 749
AcyI GRCGYC 2 cut(s) 1541, 1900
AfaI GTAC 8 cut(s) 666, 1938, 1974, 2153, 2380, 2444, 2665, 2744
AfiI CCNNNNNNNGG 6 cut(s) 988, 1257, 1569, 1620, 1946, 2987
AflII CTTAAG 2 cut(s) 1177, 2603
AflIII ACRYGT 2 cut(s) 661, 748
AjnI CCWGG 6 cut(s) 278, 435, 1670, 2360, 2699, 2974
AleI CACNNNNGTG 3 cut(s) 616, 1928, 1930
Alw21I GWGCWC 2 cut(s) 238, 2043
Alw26I GTCTC 4 cut(s) 221, 328, 703, 1101
AlwI GGATC 7 cut(s) 671, 1553, 1658, 1695, 1775, 2465, 2478
AoxI GGCC 2 cut(s) 1259, 2131
ApeKI GCWGC 7 cut(s) 11, 1473, 2157, 2582, 2777, 2951, 3052
ApoI RAATTY 6 cut(s) 197, 1133, 1427, 2768, 2911, 2939
ArsI GACNNNNNNTTYG 2 cut(s) 1829, 1861
Asp700I GAANNNNTTC 5 cut(s) 33, 1653, 1680, 1889, 2436
Asp718I GGTACC 1 cut(s) 1936
AspS9I GGNCC 5 cut(s) 39, 1297, 1384, 2131, 2978
AsuC2I CCSGG 1 cut(s) 623
AsuHPI GGTGA 2 cut(s) 499, 889
AvaII GGWCC 4 cut(s) 39, 1297, 1384, 2978
AxyI CCTNAGG 1 cut(s) 79
BaeGI GKGCMC 1 cut(s) 623
BamHI GGATCC 1 cut(s) 2470
BanI GGYRCC 1 cut(s) 1936
BanII GRGCYC 3 cut(s) 103, 534, 2043
BauI CACGAG 1 cut(s) 1014
BbrPI CACGTG 1 cut(s) 749
BbsI GAAGAC 3 cut(s) 1239, 1616, 2392
Bbv12I GWGCWC 2 cut(s) 238, 2043
BbvCI CCTCAGC 1 cut(s) 1962
BbvI GCAGC 5 cut(s) 1485, 2144, 2569, 2789, 2938
BccI CCATC 8 cut(s) 577, 773, 853, 904, 1078, 1162, 1910, 1944
BceAI ACGGC 1 cut(s) 933
BciT130I CCWGG 6 cut(s) 280, 437, 1672, 2362, 2701, 2976
BciVI GTATCC 1 cut(s) 1076
BclI TGATCA 1 cut(s) 1942
BcnI CCSGG 1 cut(s) 623
BcoDI GTCTC 4 cut(s) 221, 328, 703, 1101
BfaI CTAG 7 cut(s) 510, 717, 1211, 1301, 1418, 2598, 2693
BfrI CTTAAG 2 cut(s) 1177, 2603
BfuAI ACCTGC 3 cut(s) 1150, 2242, 2539
BfuI GTATCC 1 cut(s) 1076
BglII AGATCT 2 cut(s) 88, 2104
BisI GCNGC 8 cut(s) 12, 304, 1474, 2158, 2583, 2778, 2952, 3053
BlpI GCTNAGC 1 cut(s) 15
BlsI GCNGC 8 cut(s) 13, 305, 1475, 2159, 2584, 2779, 2953, 3054
BmcAI AGTACT 1 cut(s) 2153
Bme1390I CCNGG 7 cut(s) 280, 437, 623, 1672, 2362, 2701, 2976
Bme18I GGWCC 4 cut(s) 39, 1297, 1384, 2978
BmgT120I GGNCC 5 cut(s) 39, 1297, 1384, 2131, 2978
BmiI GGNNCC 7 cut(s) 41, 100, 1298, 1921, 1938, 2340, 2472
BmrFI CCNGG 7 cut(s) 280, 437, 623, 1672, 2362, 2701, 2976
BmrI ACTGGG 1 cut(s) 475
BmsI GCATC 8 cut(s) 112, 169, 1381, 1467, 1536, 2569, 2594, 2938
BmuI ACTGGG 1 cut(s) 475
BoxI GACNNNNGTC 1 cut(s) 962
BpiI GAAGAC 3 cut(s) 1239, 1616, 2392
BpmI CTGGAG 4 cut(s) 252, 921, 1430, 1518
Bpu10I CCTNAGC 1 cut(s) 1962
Bpu1102I GCTNAGC 1 cut(s) 15
BpuEI CTTGAG 5 cut(s) 685, 1131, 1248, 2344, 2784
BpuMI CCSGG 1 cut(s) 623
BsaAI YACGTR 1 cut(s) 749
BsaHI GRCGYC 2 cut(s) 1541, 1900
BsaJI CCNNGG 5 cut(s) 279, 1614, 1671, 2360, 2410
BsaXI ACNNNNNCTCC 2 cut(s) 2144, 2174
Bsc4I CCNNNNNNNGG 6 cut(s) 988, 1257, 1569, 1620, 1946, 2987
Bse1I ACTGG 6 cut(s) 235, 481, 1115, 1501, 1894, 2192
Bse21I CCTNAGG 1 cut(s) 79
Bse3DI GCAATG 4 cut(s) 421, 885, 1514, 1587
BseBI CCWGG 6 cut(s) 280, 437, 1672, 2362, 2701, 2976
BseDI CCNNGG 5 cut(s) 279, 1614, 1671, 2360, 2410
BseLI CCNNNNNNNGG 6 cut(s) 988, 1257, 1569, 1620, 1946, 2987
BseMI GCAATG 4 cut(s) 421, 885, 1514, 1587
BseNI ACTGG 6 cut(s) 235, 481, 1115, 1501, 1894, 2192
BseRI GAGGAG 2 cut(s) 1375, 2033
BseSI GKGCMC 1 cut(s) 623
BseXI GCAGC 5 cut(s) 1485, 2144, 2569, 2789, 2938
BseYI CCCAGC 1 cut(s) 873
BsgI GTGCAG 1 cut(s) 887
Bsh1236I CGCG 1 cut(s) 1278
BshFI GGCC 2 cut(s) 1261, 2133
BshNI GGYRCC 1 cut(s) 1936
BsiHKAI GWGCWC 2 cut(s) 238, 2043
BsiSI CCGG 1 cut(s) 623
BslFI GGGAC 3 cut(s) 1310, 1586, 2392
BslI CCNNNNNNNGG 6 cut(s) 988, 1257, 1569, 1620, 1946, 2987
BsmAI GTCTC 4 cut(s) 221, 328, 703, 1101
BsmFI GGGAC 3 cut(s) 1310, 1586, 2392
BsmI GAATGC 4 cut(s) 157, 1090, 1460, 2954
BsnI GGCC 2 cut(s) 1261, 2133
Bsp1286I GDGCHC 5 cut(s) 103, 238, 534, 623, 2043
Bsp1407I TGTACA 2 cut(s) 664, 2378
Bsp1720I GCTNAGC 1 cut(s) 15
BspACI CCGC 5 cut(s) 303, 2672, 2710, 2719, 2995
BspANI GGCC 2 cut(s) 1261, 2133
BspFNI CGCG 1 cut(s) 1278
BspHI TCATGA 1 cut(s) 1978
BspLI GGNNCC 7 cut(s) 41, 100, 1298, 1921, 1938, 2340, 2472
BspMI ACCTGC 3 cut(s) 1150, 2242, 2539
BspPI GGATC 7 cut(s) 671, 1553, 1658, 1695, 1775, 2465, 2478
BspQI GCTCTTC 1 cut(s) 2031
BspT107I GGYRCC 1 cut(s) 1936
BspTI CTTAAG 2 cut(s) 1177, 2603
BsrBI CCGCTC 1 cut(s) 2719
BsrDI GCAATG 4 cut(s) 421, 885, 1514, 1587
BsrGI TGTACA 2 cut(s) 664, 2378
BsrI ACTGG 6 cut(s) 235, 481, 1115, 1501, 1894, 2192
BssECI CCNNGG 5 cut(s) 279, 1614, 1671, 2360, 2410
BssNAI GTATAC 2 cut(s) 1449, 1744
BssNI GRCGYC 2 cut(s) 1541, 1900
BssSI CACGAG 1 cut(s) 1014
BssT1I CCWWGG 1 cut(s) 2410
Bst1107I GTATAC 2 cut(s) 1449, 1744
Bst2BI CACGAG 1 cut(s) 1014
Bst2UI CCWGG 6 cut(s) 280, 437, 1672, 2362, 2701, 2976
Bst4CI ACNGT 7 cut(s) 615, 1029, 1970, 2372, 2466, 2808, 2971
Bst6I CTCTTC 6 cut(s) 326, 348, 1806, 2031, 2142, 2199
BstACI GRCGYC 2 cut(s) 1541, 1900
BstAFI CTTAAG 2 cut(s) 1177, 2603
BstAPI GCANNNNNTGC 2 cut(s) 548, 926
BstAUI TGTACA 2 cut(s) 664, 2378
BstBAI YACGTR 1 cut(s) 749
BstC8I GCNNGC 3 cut(s) 1504, 1827, 2817
BstENI CCTNNNNNAGG 3 cut(s) 986, 1255, 1567
BstFNI CGCG 1 cut(s) 1278
BstMAI GTCTC 4 cut(s) 221, 328, 703, 1101
BstMWI GCNNNNNNNGC 5 cut(s) 548, 926, 1831, 2716, 2783
BstNI CCWGG 6 cut(s) 280, 437, 1672, 2362, 2701, 2976
BstNSI RCATGY 1 cut(s) 665
BstPAI GACNNNNGTC 1 cut(s) 962
BstSCI CCNGG 7 cut(s) 278, 435, 621, 1670, 2360, 2699, 2974
BstSLI GKGCMC 1 cut(s) 623
BstUI CGCG 1 cut(s) 1278
BstV1I GCAGC 5 cut(s) 1485, 2144, 2569, 2789, 2938
BstV2I GAAGAC 3 cut(s) 1239, 1616, 2392
BstX2I RGATCY 4 cut(s) 88, 1780, 2104, 2470
BstXI CCANNNNNNTGG 1 cut(s) 961
BstYI RGATCY 4 cut(s) 88, 1780, 2104, 2470
BstZ17I GTATAC 2 cut(s) 1449, 1744
Bsu36I CCTNAGG 1 cut(s) 79
BsuI GTATCC 1 cut(s) 1076
BsuRI GGCC 2 cut(s) 1261, 2133
BtsI GCAGTG 1 cut(s) 189
BtsIMutI CAGTG 5 cut(s) 189, 488, 1122, 1901, 1966
BveI ACCTGC 3 cut(s) 1150, 2242, 2539
Cac8I GCNNGC 3 cut(s) 1504, 1827, 2817
CciI TCATGA 1 cut(s) 1978
Cfr13I GGNCC 5 cut(s) 39, 1297, 1384, 2131, 2978
CseI GACGC 2 cut(s) 1267, 1889
Csp6I GTAC 8 cut(s) 665, 1937, 1973, 2152, 2379, 2443, 2664, 2743
CviAII CATG 5 cut(s) 95, 289, 662, 668, 1979
CviQI GTAC 8 cut(s) 665, 1937, 1973, 2152, 2379, 2443, 2664, 2743
DraI TTTAAA 3 cut(s) 1171, 1315, 2214
Eam1104I CTCTTC 6 cut(s) 326, 348, 1806, 2031, 2142, 2199
EarI CTCTTC 6 cut(s) 326, 348, 1806, 2031, 2142, 2199
Ecl136II GAGCTC 1 cut(s) 2041
Eco130I CCWWGG 1 cut(s) 2410
Eco147I AGGCCT 1 cut(s) 1261
Eco24I GRGCYC 3 cut(s) 103, 534, 2043
Eco32I GATATC 3 cut(s) 422, 1765, 2250
Eco47I GGWCC 4 cut(s) 39, 1297, 1384, 2978
Eco53kI GAGCTC 1 cut(s) 2041
Eco57I CTGAAG 4 cut(s) 702, 1276, 2043, 3024
Eco72I CACGTG 1 cut(s) 749
Eco81I CCTNAGG 1 cut(s) 79
EcoICRI GAGCTC 1 cut(s) 2041
EcoNI CCTNNNNNAGG 3 cut(s) 986, 1255, 1567
EcoO109I RGGNCCY 1 cut(s) 1297
EcoRII CCWGG 6 cut(s) 278, 435, 1670, 2360, 2699, 2974
EcoRV GATATC 3 cut(s) 422, 1765, 2250
EcoT14I CCWWGG 1 cut(s) 2410
EcoT22I ATGCAT 2 cut(s) 544, 1460
EcoT38I GRGCYC 3 cut(s) 103, 534, 2043
ErhI CCWWGG 1 cut(s) 2410
FaeI CATG 5 cut(s) 98, 292, 665, 671, 1982
FalI AAGNNNNNCTT 4 cut(s) 758, 790, 2274, 2306
FaqI GGGAC 3 cut(s) 1310, 1586, 2392
FatI CATG 5 cut(s) 94, 288, 661, 667, 1978
FauNDI CATATG 1 cut(s) 2629
FbaI TGATCA 1 cut(s) 1942
FblI GTMKAC 3 cut(s) 1448, 1743, 2181
Fnu4HI GCNGC 8 cut(s) 12, 304, 1474, 2158, 2583, 2778, 2952, 3053
FriOI GRGCYC 3 cut(s) 103, 534, 2043
Fsp4HI GCNGC 8 cut(s) 12, 304, 1474, 2158, 2583, 2778, 2952, 3053
FspBI CTAG 7 cut(s) 510, 717, 1211, 1301, 1418, 2598, 2693
GluI GCNGC 8 cut(s) 12, 304, 1474, 2158, 2583, 2778, 2952, 3053
GsaI CCCAGC 1 cut(s) 877
GsuI CTGGAG 4 cut(s) 252, 921, 1430, 1518
HaeIII GGCC 2 cut(s) 1261, 2133
HapII CCGG 1 cut(s) 623
HgaI GACGC 2 cut(s) 1267, 1889
Hin1I GRCGYC 2 cut(s) 1541, 1900
Hin1II CATG 5 cut(s) 98, 292, 665, 671, 1982
HincII GTYRAC 1 cut(s) 207
HindII GTYRAC 1 cut(s) 207
HindIII AAGCTT 2 cut(s) 17, 703
HpaII CCGG 1 cut(s) 623
HphI GGTGA 2 cut(s) 499, 889
Hpy166II GTNNAC 9 cut(s) 207, 395, 494, 1384, 1449, 1744, 1973, 2182, 2379
Hpy8I GTNNAC 9 cut(s) 207, 395, 494, 1384, 1449, 1744, 1973, 2182, 2379
HpyCH4III ACNGT 7 cut(s) 615, 1029, 1970, 2372, 2466, 2808, 2971
HpyCH4IV ACGT 3 cut(s) 748, 1541, 1839
HpyF10VI GCNNNNNNNGC 5 cut(s) 548, 926, 1831, 2716, 2783
HpySE526I ACGT 3 cut(s) 748, 1541, 1839
Hsp92I GRCGYC 2 cut(s) 1541, 1900
Hsp92II CATG 5 cut(s) 98, 292, 665, 671, 1982
KpnI GGTACC 1 cut(s) 1940
Ksp22I TGATCA 1 cut(s) 1942
LguI GCTCTTC 1 cut(s) 2031
LmnI GCTCC 7 cut(s) 98, 233, 1156, 1499, 2046, 2165, 2344
Lsp1109I GCAGC 5 cut(s) 1485, 2144, 2569, 2789, 2938
LweI GCATC 8 cut(s) 112, 169, 1381, 1467, 1536, 2569, 2594, 2938
MaeI CTAG 7 cut(s) 510, 717, 1211, 1301, 1418, 2598, 2693
MaeII ACGT 3 cut(s) 748, 1541, 1839
MaeIII GTNAC 6 cut(s) 609, 721, 964, 1011, 1492, 2551
MbiI CCGCTC 1 cut(s) 2719
MfeI CAATTG 2 cut(s) 605, 1479
MflI RGATCY 4 cut(s) 88, 1780, 2104, 2470
MhlI GDGCHC 5 cut(s) 103, 238, 534, 623, 2043
MlyI GAGTC 5 cut(s) 302, 705, 1193, 2134, 2414
MmeI TCCRAC 3 cut(s) 1011, 2448, 2598
Mph1103I ATGCAT 2 cut(s) 544, 1460
MroXI GAANNNNTTC 5 cut(s) 33, 1653, 1680, 1889, 2436
MslI CAYNNNNRTG 8 cut(s) 616, 666, 672, 959, 1865, 1928, 1930, 2031
MspCI CTTAAG 2 cut(s) 1177, 2603
MspI CCGG 1 cut(s) 623
MspR9I CCNGG 7 cut(s) 280, 437, 623, 1672, 2362, 2701, 2976
MunI CAATTG 2 cut(s) 605, 1479
Mva1269I GAATGC 4 cut(s) 157, 1090, 1460, 2954
MvaI CCWGG 6 cut(s) 280, 437, 1672, 2362, 2701, 2976
MvnI CGCG 1 cut(s) 1278
MwoI GCNNNNNNNGC 5 cut(s) 548, 926, 1831, 2716, 2783
NciI CCSGG 1 cut(s) 623
NdeI CATATG 1 cut(s) 2629
NlaIII CATG 5 cut(s) 98, 292, 665, 671, 1982
NlaIV GGNNCC 7 cut(s) 41, 100, 1298, 1921, 1938, 2340, 2472
NmuCI GTSAC 4 cut(s) 609, 721, 964, 1011
NsiI ATGCAT 2 cut(s) 544, 1460
NspI RCATGY 1 cut(s) 665
OliI CACNNNNGTG 3 cut(s) 616, 1928, 1930
PagI TCATGA 1 cut(s) 1978
PceI AGGCCT 1 cut(s) 1261
PciI ACATGT 1 cut(s) 661
PciSI GCTCTTC 1 cut(s) 2031
PctI GAATGC 4 cut(s) 157, 1090, 1460, 2954
PdmI GAANNNNTTC 5 cut(s) 33, 1653, 1680, 1889, 2436
PfoI TCCNGGA 2 cut(s) 435, 2699
PkrI GCNGC 8 cut(s) 13, 305, 1475, 2159, 2584, 2779, 2953, 3054
PleI GAGTC 5 cut(s) 301, 704, 1192, 2134, 2413
PmaCI CACGTG 1 cut(s) 749
PmlI CACGTG 1 cut(s) 749
PpsI GAGTC 5 cut(s) 301, 704, 1192, 2134, 2413
Ppu21I YACGTR 1 cut(s) 749
PpuMI RGGWCCY 1 cut(s) 1297
PscI ACATGT 1 cut(s) 661
PshAI GACNNNNGTC 1 cut(s) 962
Psp124BI GAGCTC 1 cut(s) 2043
Psp5II RGGWCCY 1 cut(s) 1297
Psp6I CCWGG 6 cut(s) 278, 435, 1670, 2360, 2699, 2974
PspCI CACGTG 1 cut(s) 749
PspFI CCCAGC 1 cut(s) 873
PspGI CCWGG 6 cut(s) 278, 435, 1670, 2360, 2699, 2974
PspN4I GGNNCC 7 cut(s) 41, 100, 1298, 1921, 1938, 2340, 2472
PspPI GGNCC 5 cut(s) 39, 1297, 1384, 2131, 2978
PspPPI RGGWCCY 1 cut(s) 1297
PsuI RGATCY 4 cut(s) 88, 1780, 2104, 2470
RsaI GTAC 8 cut(s) 666, 1938, 1974, 2153, 2380, 2444, 2665, 2744
RsaNI GTAC 8 cut(s) 665, 1937, 1973, 2152, 2379, 2443, 2664, 2743
RseI CAYNNNNRTG 8 cut(s) 616, 666, 672, 959, 1865, 1928, 1930, 2031
SacI GAGCTC 1 cut(s) 2043
SapI GCTCTTC 1 cut(s) 2031
SatI GCNGC 8 cut(s) 12, 304, 1474, 2158, 2583, 2778, 2952, 3053
Sau96I GGNCC 5 cut(s) 39, 1297, 1384, 2131, 2978
ScaI AGTACT 1 cut(s) 2153
SchI GAGTC 5 cut(s) 302, 705, 1193, 2134, 2414
ScrFI CCNGG 7 cut(s) 280, 437, 623, 1672, 2362, 2701, 2976
SduI GDGCHC 5 cut(s) 103, 238, 534, 623, 2043
SfaNI GCATC 8 cut(s) 112, 169, 1381, 1467, 1536, 2569, 2594, 2938
SinI GGWCC 4 cut(s) 39, 1297, 1384, 2978
SmiMI CAYNNNNRTG 8 cut(s) 616, 666, 672, 959, 1865, 1928, 1930, 2031
SmlI CTYRAG 7 cut(s) 700, 1146, 1177, 1263, 2323, 2603, 2799
SmoI CTYRAG 7 cut(s) 700, 1146, 1177, 1263, 2323, 2603, 2799
SseBI AGGCCT 1 cut(s) 1261
SsiI CCGC 5 cut(s) 303, 2672, 2710, 2719, 2995
SspI AATATT 2 cut(s) 50, 1352
SspMI CTAG 7 cut(s) 510, 717, 1211, 1301, 1418, 2598, 2693
SstI GAGCTC 1 cut(s) 2043
StuI AGGCCT 1 cut(s) 1261
StyD4I CCNGG 7 cut(s) 278, 435, 621, 1670, 2360, 2699, 2974
StyI CCWWGG 1 cut(s) 2410
TaaI ACNGT 7 cut(s) 615, 1029, 1970, 2372, 2466, 2808, 2971
TaiI ACGT 3 cut(s) 751, 1544, 1842
TaqI TCGA 3 cut(s) 1059, 2091, 2246
TatI WGTACW 6 cut(s) 664, 1972, 2151, 2378, 2442, 2663
TauI GCSGC 1 cut(s) 306
TscAI CASTG 5 cut(s) 189, 488, 1122, 1901, 1973
TseFI GTSAC 4 cut(s) 609, 721, 964, 1011
TseI GCWGC 7 cut(s) 11, 1473, 2157, 2582, 2777, 2951, 3052
Tsp45I GTSAC 4 cut(s) 609, 721, 964, 1011
TspGWI ACGGA 1 cut(s) 1365
TspRI CASTG 5 cut(s) 189, 488, 1122, 1901, 1973
Vha464I CTTAAG 2 cut(s) 1177, 2603
VpaK11BI GGWCC 4 cut(s) 39, 1297, 1384, 2978
XagI CCTNNNNNAGG 3 cut(s) 986, 1255, 1567
XapI RAATTY 6 cut(s) 197, 1133, 1427, 2768, 2911, 2939
XceI RCATGY 1 cut(s) 665
XcmI CCANNNNNNNNNTGG 4 cut(s) 286, 488, 2349, 2464
XmiI GTMKAC 3 cut(s) 1448, 1743, 2181
XmnI GAANNNNTTC 5 cut(s) 33, 1653, 1680, 1889, 2436
XspI CTAG 7 cut(s) 510, 717, 1211, 1301, 1418, 2598, 2693
ZraI GACGTC 1 cut(s) 1542
ZrmI AGTACT 1 cut(s) 2153
Zsp2I ATGCAT 2 cut(s) 544, 1460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.