Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002858

Physical Location & Seq

Genomic Coordinates Reverse (-)

1113040 .. 1117175

Gene Structure 4136 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015740

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3075 bp

ATGGAAGGTGCGTCAAGTTCTGATTGGACCCAGAAGGAAGAAGCTGCTAAGCTTCACATAGAAGAAATTCGGACCCAGAAATATTCTATTGGTAAAGACGAAGCTAACCCCTTGGGCAAAGATCTTCATCGAGCCCTGATAACCAACATCTCAAAAGGTGCCAACTTTTTGTGGGAACTCATCCTGAAGAGAATGAATAGCGGTGTAGTGCCAGATATGAAATTTCTGTTGACCAAGGAAGACATAACTGAGACTGGAGCACCGGCTACTCTGTTGGTTTTCAATAATGAAGTTGGCTTTTCCAGGGAGAACATGGATTCCATTTGCGGCATATTCCATTCTACAAAGATGGAAAAGAGACAGCAGAGGTTTATTGAAGAGAATGGAAGCGGATTCAAAAGTGTATTTCTTGTGAGTTCACAGCCTTACATTTTCAGCAATCGATATCGTGTTAGATTCCAGGAAGAACCAGATCGAGATTGTGGTATTGGGTATATAGCTCCCCAGTGGGTGAGTGGACATCCTTCTCTTTCTAGCATATATAATGTGTATGGGCTCAGTAATGCCTACCCTGCAACCACAGTTATCCTTCCTCTAAAGCCTGAGATGGTTGAAGCTGTGAGAGAGCAATTGTCACAGTTGTGCCCAGAGATAATCCTGTTCTTATCGAAGTTAAAGCGACTATCTGCACGTGACTATGATTCTGAAGTAGCTGATAGGGTTTCAAGCTTTCTTATATCTAGTGTGACTAAAAACAAGGAGGTTTCTTCACGTGTGGTTCAACTTTCAAAGAAAAACTTGGATGATACTGAGGAATTATGCGATTATTACTTGTGGGAAAAGGAATTTCCAGTAAAACCTGAGAATAGATTTGGTGTAAGGATGGATGTGCAGAGCTGGGTGATTACCATTGCTTTCCCATCTGGAGAAAGGATGAGAAATGCAACTTCTTCTGTTGGTCTATTCGCTTTCCTCCCCACGACAATGGTCACAGACTTCCCGTTTTTAATTCAAGCTGGCTTCATTCTTAATTCATCACGAGATTCTATACTGTTGGACAATGTATGGAACTTGGGGATTCTCAATTGTATCCCATCAGCATTTGTGAATGCCTTTCAGTCTCACTCCTTGTGTTGTCCAGTGGGTAAGATATTTGAATTTTTAACTGCTCAAGCTTCATCAATTCCCAAGTTTAAAGACTTAAGAGAGTCCATTAGAGCTGAATTGCAGAGTCTAGTGATAGTGCCTTGTCATGTTATTGAGGCTATGTCTTCCTCTGCAAGGCCTCAAGAGGCAGTTCGCGTCCTTCCAAACTTCAGGGACCTAGTGGGTGGATTTAAAATAGAAGGTTATGTTTTGAGCAGTTCATCAATATATTTACTGGGGAGGGTCTTGCATCCGTCTCTGGACCCTGAAAAATACAATGCAGTTCTGGAGTTTCTAGGTGTGGAATGGGCGAACGACCATTGGTATACTGAATGCATCCGAAGGCTCTGCAGCTCAATTGATGAAAAGTGCATCAAGAATCTGACGTCAAACTCTCCTGATGATCCCTTACTGAGGGACTTAACTAACAGCATTGCAGGAAGAAGGTGTTTGAAGACCTTGGATTGGACAGATCCGTATAAAACGCCAGAAGAATCTATTCAGTTTGATCCAGCCTGGGAAAGTATTCTGGATCGGACAATGTTACCAACCATTGATGAGAATTTTTATGGAACTGATATTCTTGTCTACAAGAATCAGTTACGAGATATCGGTGTGAAGGTAGATCCTTTGAGTGTTTGTTCTCTTCTTTATGGGAATTTTTCTGAGCTGGTAGGCACTTATTTTGAAAATACTTTCGTAAAAAGTATTTACACCTTCCTGAACAAGTTCCAATGGCGTCCAGAAGAGCCAGATGGAACCAAAATTTTTATAGATACTGATGGTTATGATTGGGTTGACCCTGATGCTTGTGTACTTCATGGTGATCCAAATCTTAGGCGCAACACCTATTCGCTTGATGAATATTATGATGAAGAGCTCCTCCCCTTGTTTTCTTCAGTCTTTGGAGTCAAAGAGAAGCCCTCCATTGATGATTACGTGGGTTTCTGGAATGAATGCGATGCAGCAGTGATGGGCCAAGACCGCCAAGTGGCTCTGGTAGGGTTCTGGTGCTCCTTCCGGAAGTATGTTGTAGACAACTGGAATCCAAACTTTGATGAGTGTCTAAGACAGAAGTTGACCAAATTACCTGCCACAAAGTCAACATCGGAGAAAATATATCTGATCAACAGGACAGAAGTATTCCTTGCTGATGATTTGCAACTGAAAAGAATTTTCTTGAGCTATGATGAGGCTCCATTGTTTGTGTGGTGTCCCCCAAGCGATTGTTTGTCTCCGATAAGACTTTATGAGATATATGAATCCCTTGGAGTGAGAAAGGTTTCTGAATCTGTTGAGCACAGAGAGAATATGTGCGGCGGACTAGGTGAAGTAAGGGCAATATATGGATTGATTGGCAGGGGTTTAATCAAGATTATTCTGGGTTTTCTTGCTGGTTGGCAGGTGTGTATGTCATTGGAAGAGAGACAATATGCTACACCTTCATTTGTCCAACTTCAAACATACAGGATTAACAAACATTATCAATTCATTTACCGACTAATGCGTTCTAGAAGTCCAGCAGTGGAAGTGAGAGTAGCGAAGCTAGTTTACTGGATGAAGAATTCTAAGCAGTTGTTCATTGATAATTCAGGGTACACAAATGGAAAGTCTGATCTAGAATTTGTTGCAGCTTTCGCTGACGAACTTGCTGAAGGACTGTTGGTGCAGGCAATACATTATGCAGCGAGAGAAACATTGAGCCGGATTATCCAATTTGGGTTTCTAAGTGATTTCGATGAGGAAAAAGTGGATGGTATGCTGATCAGAGAAAACTTACAGTTGTCTGTGGAAGATCATGAGTTTGTTGATGCTGCTGCCTTCCCCTCACCAACCGAACCTGGTCCTGTTTGTGGAAAGCGGCCATCTATGGAGAGAGATCAATCAGGCCCTTCCACATCAACTTCTTCAAGCAAGAAGCTGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1025

Amino Acids

116.57

Weight (kDa)

5.22

Isoelectric Point (pI)

45.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002858)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g13480
pyrus_communis	pycom08g06270
rosa_chinensis	RchiOBHm_Chr2g0086071 RchiOBHm_Chr2g0086081 RchiOBHm_Chr2g0086101 RchiOBHm_Chr2g0122661
rosa_laevigata	RLG00000015740 RLG00000015743 RLG00000018698 RLG00000018704
rosa_multiflora	Rmu_sc0003133.1_g000025 Rmu_sc0006012.1_g000008 Rmu_sc0017765.1_g000003 Rmu_sc0020050.1_g000004 Rmu_ssc0000041.1_g000003 Rmu_ssc0000355.1_g000017
rosa_roxburghii	Rroxscaffold_2G00106820 Rroxscaffold_2G00121390 Rroxscaffold_2G00154810 Rroxscaffold_6G00408820
rosa_rugosa	Rorug01G0465700 Rorug01G0465700 Rorug02G0241200
rosa_samantha	Rh2AG014900 Rh2AG015300 Rh2AG298900 Rh2BG015400 Rh2BG307800 Rh2CG015900 Rh2CG016300 Rh2CG285900 Rh2DG017200 Rh2DG017400 Rh4BG170400 Rh6CG207900 Rh6DG198200
rosa_wichuraiana	Rw2G001310 Rw2G001330 Rw2G023820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2539
AatII	GACGTC	1 cut(s)	1535
Acc36I	ACCTGC	2 cut(s)	2245, 2539
AccB1I	GGYRCC	1 cut(s)	158
AccI	GTMKAC	3 cut(s)	1472, 1734, 2181
AccII	CGCG	1 cut(s)	1302
AccIII	TCCGGA	1 cut(s)	2166
AciI	CCGC	7 cut(s)	201, 327, 390, 2131, 2463, 2466, 3007
AclWI	GGATC	6 cut(s)	1544, 1613, 1649, 1686, 1766, 1967
AcoI	YGGCCR	1 cut(s)	3008
AcuI	CTGAAG	5 cut(s)	206, 726, 1300, 2028, 2820
AcvI	CACGTG	2 cut(s)	692, 773
AcyI	GRCGYC	2 cut(s)	1532, 1885
AfaI	GTAC	2 cut(s)	1962, 2744
AfiI	CCNNNNNNNGG	5 cut(s)	1281, 1560, 1611, 2137, 2999
AflII	CTTAAG	1 cut(s)	1201
AflIII	ACRYGT	1 cut(s)	772
AjnI	CCWGG	4 cut(s)	302, 459, 1661, 2986
AjuI	GAANNNNNNNTTGG	2 cut(s)	2853, 2885
AleI	CACNNNNGTG	1 cut(s)	640
AloI	GAACNNNNNNTCC	2 cut(s)	302, 334
Alw21I	GWGCWC	4 cut(s)	262, 2028, 2162, 2448
Alw26I	GTCTC	6 cut(s)	245, 352, 1125, 1407, 2385, 2566
AlwI	GGATC	6 cut(s)	1544, 1613, 1649, 1686, 1766, 1967
Aor13HI	TCCGGA	1 cut(s)	2166
AoxI	GGCC	4 cut(s)	1283, 2122, 3008, 3034
ApeKI	GCWGC	8 cut(s)	44, 1497, 2111, 2777, 2831, 2960, 2963, 3067
ArsI	GACNNNNNNTTYG	2 cut(s)	2741, 2773
Asp700I	GAANNNNTTC	5 cut(s)	66, 1644, 1671, 1874, 2428
AspLEI	GCGC	1 cut(s)	1989
AspS9I	GGNCC	7 cut(s)	27, 72, 1321, 1408, 2122, 2990, 3035
AsuHPI	GGTGA	5 cut(s)	523, 913, 1982, 2486, 2967
AvaII	GGWCC	5 cut(s)	27, 72, 1321, 1408, 2990
BaeGI	GKGCMC	1 cut(s)	647
BanI	GGYRCC	1 cut(s)	158
BanII	GRGCYC	3 cut(s)	136, 558, 2028
BarI	GAAGNNNNNNTAC	2 cut(s)	2681, 2713
BauI	CACGAG	1 cut(s)	1038
BbrPI	CACGTG	2 cut(s)	692, 773
BbsI	GAAGAC	3 cut(s)	246, 1263, 1607
Bbv12I	GWGCWC	4 cut(s)	262, 2028, 2162, 2448
BbvI	GCAGC	8 cut(s)	31, 1509, 2123, 2789, 2843, 2947, 2950, 3054
BcgI	CGANNNNNNTGC	2 cut(s)	1476, 1510
BciT130I	CCWGG	4 cut(s)	304, 461, 1663, 2988
BciVI	GTATCC	1 cut(s)	1100
BclI	TGATCA	2 cut(s)	2271, 2910
BcoDI	GTCTC	6 cut(s)	245, 352, 1125, 1407, 2385, 2566
BfaI	CTAG	9 cut(s)	534, 741, 1235, 1325, 1442, 2471, 2658, 2693, 2765
BfmI	CTRYAG	1 cut(s)	1495
BfrI	CTTAAG	1 cut(s)	1201
BfuAI	ACCTGC	2 cut(s)	2245, 2539
BfuI	GTATCC	1 cut(s)	1100
BglII	AGATCT	1 cut(s)	121
BlpI	GCTNAGC	1 cut(s)	48
Bme1390I	CCNGG	4 cut(s)	304, 461, 1663, 2988
Bme18I	GGWCC	5 cut(s)	27, 72, 1321, 1408, 2990
BmgT120I	GGNCC	7 cut(s)	27, 72, 1321, 1408, 2122, 2990, 3035
BmiI	GGNNCC	7 cut(s)	29, 74, 160, 1322, 1410, 1906, 2343
BmrFI	CCNGG	4 cut(s)	304, 461, 1663, 2988
BmrI	ACTGGG	2 cut(s)	499, 1391
BmsI	GCATC	6 cut(s)	1405, 1491, 1527, 1942, 2098, 2947
BmuI	ACTGGG	2 cut(s)	499, 1391
BoxI	GACNNNNGTC	1 cut(s)	986
BpiI	GAAGAC	3 cut(s)	246, 1263, 1607
BplI	GAGNNNNNCTC	2 cut(s)	2054, 2086
BpmI	CTGGAG	3 cut(s)	276, 945, 1454
Bpu1102I	GCTNAGC	1 cut(s)	48
BpuEI	CTTGAG	3 cut(s)	1155, 1272, 2347
Bsa29I	ATCGAT	1 cut(s)	442
BsaAI	YACGTR	3 cut(s)	692, 773, 2086
BsaBI	GATNNNNATC	2 cut(s)	126, 1977
BsaHI	GRCGYC	2 cut(s)	1532, 1885
BsaJI	CCNNGG	6 cut(s)	111, 234, 303, 1605, 1662, 2413
BsaWI	WCCGGW	1 cut(s)	2166
Bsc4I	CCNNNNNNNGG	5 cut(s)	1281, 1560, 1611, 2137, 2999
Bse118I	RCCGGY	1 cut(s)	262
Bse1I	ACTGG	7 cut(s)	259, 505, 851, 1139, 1386, 2192, 2705
Bse3DI	GCAATG	2 cut(s)	909, 1578
Bse8I	GATNNNNATC	2 cut(s)	126, 1977
BseAI	TCCGGA	1 cut(s)	2166
BseBI	CCWGG	4 cut(s)	304, 461, 1663, 2988
BseCI	ATCGAT	1 cut(s)	442
BseDI	CCNNGG	6 cut(s)	111, 234, 303, 1605, 1662, 2413
BseJI	GATNNNNATC	2 cut(s)	126, 1977
BseLI	CCNNNNNNNGG	5 cut(s)	1281, 1560, 1611, 2137, 2999
BseMI	GCAATG	2 cut(s)	909, 1578
BseMII	CTCAG	7 cut(s)	240, 571, 594, 801, 852, 1550, 1803
BseNI	ACTGG	7 cut(s)	259, 505, 851, 1139, 1386, 2192, 2705
BseRI	GAGGAG	1 cut(s)	2018
BseSI	GKGCMC	1 cut(s)	647
BseXI	GCAGC	8 cut(s)	31, 1509, 2123, 2789, 2843, 2947, 2950, 3054
BseYI	CCCAGC	1 cut(s)	897
BsgI	GTGCAG	3 cut(s)	672, 911, 2834
Bsh1236I	CGCG	1 cut(s)	1302
BshFI	GGCC	4 cut(s)	1285, 2124, 3010, 3036
BshNI	GGYRCC	1 cut(s)	158
BshVI	ATCGAT	1 cut(s)	442
BsiHKAI	GWGCWC	4 cut(s)	262, 2028, 2162, 2448
BsiSI	CCGG	3 cut(s)	263, 2167, 2851
BslFI	GGGAC	3 cut(s)	1334, 1577, 2346
BslI	CCNNNNNNNGG	5 cut(s)	1281, 1560, 1611, 2137, 2999
BsmAI	GTCTC	6 cut(s)	245, 352, 1125, 1407, 2385, 2566
BsmBI	CGTCTC	1 cut(s)	1407
BsmFI	GGGAC	3 cut(s)	1334, 1577, 2346
BsmI	GAATGC	3 cut(s)	1114, 1484, 2108
BsnI	GGCC	4 cut(s)	1285, 2124, 3010, 3036
Bsp1286I	GDGCHC	7 cut(s)	136, 262, 558, 647, 2028, 2162, 2448
Bsp13I	TCCGGA	1 cut(s)	2166
Bsp1720I	GCTNAGC	1 cut(s)	48
BspACI	CCGC	7 cut(s)	201, 327, 390, 2131, 2463, 2466, 3007
BspANI	GGCC	4 cut(s)	1285, 2124, 3010, 3036
BspCNI	CTCAG	7 cut(s)	241, 570, 595, 802, 853, 1551, 1804
BspDI	ATCGAT	1 cut(s)	442
BspEI	TCCGGA	1 cut(s)	2166
BspFNI	CGCG	1 cut(s)	1302
BspHI	TCATGA	1 cut(s)	2944
BspLI	GGNNCC	7 cut(s)	29, 74, 160, 1322, 1410, 1906, 2343
BspMAI	CTGCAG	1 cut(s)	1499
BspMI	ACCTGC	2 cut(s)	2245, 2539
BspPI	GGATC	6 cut(s)	1544, 1613, 1649, 1686, 1766, 1967
BspQI	GCTCTTC	2 cut(s)	1887, 2016
BspT107I	GGYRCC	1 cut(s)	158
BspTI	CTTAAG	1 cut(s)	1201
BsrDI	GCAATG	2 cut(s)	909, 1578
BsrFI	RCCGGY	1 cut(s)	262
BsrI	ACTGG	7 cut(s)	259, 505, 851, 1139, 1386, 2192, 2705
BssAI	RCCGGY	1 cut(s)	262
BssECI	CCNNGG	6 cut(s)	111, 234, 303, 1605, 1662, 2413
BssNAI	GTATAC	1 cut(s)	1473
BssNI	GRCGYC	2 cut(s)	1532, 1885
BssSI	CACGAG	1 cut(s)	1038
BssT1I	CCWWGG	4 cut(s)	111, 234, 1605, 2413
Bst1107I	GTATAC	1 cut(s)	1473
Bst2BI	CACGAG	1 cut(s)	1038
Bst2UI	CCWGG	4 cut(s)	304, 461, 1663, 2988
Bst4CI	ACNGT	5 cut(s)	583, 639, 1053, 2808, 2928
Bst6I	CTCTTC	6 cut(s)	182, 372, 1797, 1887, 2016, 2562
BstACI	GRCGYC	2 cut(s)	1532, 1885
BstAFI	CTTAAG	1 cut(s)	1201
BstBAI	YACGTR	3 cut(s)	692, 773, 2086
BstC8I	GCNNGC	2 cut(s)	1018, 2817
BstENI	CCTNNNNNAGG	2 cut(s)	1279, 1558
BstFNI	CGCG	1 cut(s)	1302
BstHHI	GCGC	1 cut(s)	1989
BstMAI	GTCTC	6 cut(s)	245, 352, 1125, 1407, 2385, 2566
BstMWI	GCNNNNNNNGC	3 cut(s)	572, 2130, 2783
BstNI	CCWGG	4 cut(s)	304, 461, 1663, 2988
BstPAI	GACNNNNGTC	1 cut(s)	986
BstSCI	CCNGG	4 cut(s)	302, 459, 1661, 2986
BstSFI	CTRYAG	1 cut(s)	1495
BstSLI	GKGCMC	1 cut(s)	647
BstUI	CGCG	1 cut(s)	1302
BstV1I	GCAGC	8 cut(s)	31, 1509, 2123, 2789, 2843, 2947, 2950, 3054
BstV2I	GAAGAC	3 cut(s)	246, 1263, 1607
BstX2I	RGATCY	3 cut(s)	121, 1618, 1771
BstXI	CCANNNNNNTGG	1 cut(s)	985
BstYI	RGATCY	3 cut(s)	121, 1618, 1771
BstZ17I	GTATAC	1 cut(s)	1473
Bsu15I	ATCGAT	1 cut(s)	442
BsuI	GTATCC	1 cut(s)	1100
BsuRI	GGCC	4 cut(s)	1285, 2124, 3010, 3036
BsuTUI	ATCGAT	1 cut(s)	442
BtgZI	GCGATG	1 cut(s)	2121
BtsI	GCAGTG	2 cut(s)	2121, 2676
BtsIMutI	CAGTG	4 cut(s)	512, 1146, 2121, 2676
BveI	ACCTGC	2 cut(s)	2245, 2539
Cac8I	GCNNGC	2 cut(s)	1018, 2817
CciI	TCATGA	1 cut(s)	2944
CfoI	GCGC	1 cut(s)	1989
Cfr10I	RCCGGY	1 cut(s)	262
Cfr13I	GGNCC	7 cut(s)	27, 72, 1321, 1408, 2122, 2990, 3035
ClaI	ATCGAT	1 cut(s)	442
CseI	GACGC	2 cut(s)	1291, 1874
CsiI	ACCWGGT	1 cut(s)	2986
Csp6I	GTAC	2 cut(s)	1961, 2743
CviAII	CATG	4 cut(s)	313, 1253, 1967, 2945
CviQI	GTAC	2 cut(s)	1961, 2743
DraI	TTTAAA	2 cut(s)	1195, 1339
EaeI	YGGCCR	1 cut(s)	3008
Eam1104I	CTCTTC	6 cut(s)	182, 372, 1797, 1887, 2016, 2562
EarI	CTCTTC	6 cut(s)	182, 372, 1797, 1887, 2016, 2562
EciI	GGCGGA	1 cut(s)	2481
Ecl136II	GAGCTC	1 cut(s)	2026
Eco130I	CCWWGG	4 cut(s)	111, 234, 1605, 2413
Eco147I	AGGCCT	1 cut(s)	1285
Eco24I	GRGCYC	3 cut(s)	136, 558, 2028
Eco32I	GATATC	2 cut(s)	446, 1756
Eco47I	GGWCC	5 cut(s)	27, 72, 1321, 1408, 2990
Eco53kI	GAGCTC	1 cut(s)	2026
Eco57I	CTGAAG	5 cut(s)	206, 726, 1300, 2028, 2820
Eco72I	CACGTG	2 cut(s)	692, 773
EcoICRI	GAGCTC	1 cut(s)	2026
EcoNI	CCTNNNNNAGG	2 cut(s)	1279, 1558
EcoO109I	RGGNCCY	2 cut(s)	1321, 3035
EcoRI	GAATTC	1 cut(s)	2710
EcoRII	CCWGG	4 cut(s)	302, 459, 1661, 2986
EcoRV	GATATC	2 cut(s)	446, 1756
EcoT14I	CCWWGG	4 cut(s)	111, 234, 1605, 2413
EcoT22I	ATGCAT	1 cut(s)	1484
EcoT38I	GRGCYC	3 cut(s)	136, 558, 2028
ErhI	CCWWGG	4 cut(s)	111, 234, 1605, 2413
Esp3I	CGTCTC	1 cut(s)	1407
FaeI	CATG	4 cut(s)	316, 1256, 1970, 2948
FalI	AAGNNNNNCTT	4 cut(s)	782, 814, 2277, 2309
FaqI	GGGAC	3 cut(s)	1334, 1577, 2346
FatI	CATG	4 cut(s)	312, 1252, 1966, 2944
FbaI	TGATCA	2 cut(s)	2271, 2910
FblI	GTMKAC	3 cut(s)	1472, 1734, 2181
FriOI	GRGCYC	3 cut(s)	136, 558, 2028
FspBI	CTAG	9 cut(s)	534, 741, 1235, 1325, 1442, 2471, 2658, 2693, 2765
GlaI	GCGC	1 cut(s)	1988
GsaI	CCCAGC	1 cut(s)	901
GsuI	CTGGAG	3 cut(s)	276, 945, 1454
HaeIII	GGCC	4 cut(s)	1285, 2124, 3010, 3036
HapII	CCGG	3 cut(s)	263, 2167, 2851
HgaI	GACGC	2 cut(s)	1291, 1874
HhaI	GCGC	1 cut(s)	1989
Hin1I	GRCGYC	2 cut(s)	1532, 1885
Hin1II	CATG	4 cut(s)	316, 1256, 1970, 2948
Hin6I	GCGC	1 cut(s)	1987
HinP1I	GCGC	1 cut(s)	1987
HincII	GTYRAC	4 cut(s)	231, 1945, 2226, 2250
HindII	GTYRAC	4 cut(s)	231, 1945, 2226, 2250
HindIII	AAGCTT	3 cut(s)	50, 727, 1173
HpaII	CCGG	3 cut(s)	263, 2167, 2851
HphI	GGTGA	5 cut(s)	523, 913, 1982, 2486, 2967
HpyCH4III	ACNGT	5 cut(s)	583, 639, 1053, 2808, 2928
HpyCH4IV	ACGT	4 cut(s)	691, 772, 1532, 2085
HpyF10VI	GCNNNNNNNGC	3 cut(s)	572, 2130, 2783
HpySE526I	ACGT	4 cut(s)	691, 772, 1532, 2085
Hsp92I	GRCGYC	2 cut(s)	1532, 1885
Hsp92II	CATG	4 cut(s)	316, 1256, 1970, 2948
HspAI	GCGC	1 cut(s)	1987
Kpn2I	TCCGGA	1 cut(s)	2166
Ksp22I	TGATCA	2 cut(s)	2271, 2910
LguI	GCTCTTC	2 cut(s)	1887, 2016
LmnI	GCTCC	5 cut(s)	257, 505, 2031, 2165, 2347
Lsp1109I	GCAGC	8 cut(s)	31, 1509, 2123, 2789, 2843, 2947, 2950, 3054
LweI	GCATC	6 cut(s)	1405, 1491, 1527, 1942, 2098, 2947
MabI	ACCWGGT	1 cut(s)	2986
MaeI	CTAG	9 cut(s)	534, 741, 1235, 1325, 1442, 2471, 2658, 2693, 2765
MaeII	ACGT	4 cut(s)	691, 772, 1532, 2085
MaeIII	GTNAC	6 cut(s)	633, 692, 745, 988, 1689, 1746
MfeI	CAATTG	3 cut(s)	629, 1084, 1503
MflI	RGATCY	3 cut(s)	121, 1618, 1771
MhlI	GDGCHC	7 cut(s)	136, 262, 558, 647, 2028, 2162, 2448
MlyI	GAGTC	3 cut(s)	1217, 1240, 2064
MmeI	TCCRAC	2 cut(s)	1035, 2623
Mph1103I	ATGCAT	1 cut(s)	1484
MroI	TCCGGA	1 cut(s)	2166
MroXI	GAANNNNTTC	5 cut(s)	66, 1644, 1671, 1874, 2428
MslI	CAYNNNNRTG	2 cut(s)	640, 983
MspCI	CTTAAG	1 cut(s)	1201
MspI	CCGG	3 cut(s)	263, 2167, 2851
MspR9I	CCNGG	4 cut(s)	304, 461, 1663, 2988
MunI	CAATTG	3 cut(s)	629, 1084, 1503
Mva1269I	GAATGC	3 cut(s)	1114, 1484, 2108
MvaI	CCWGG	4 cut(s)	304, 461, 1663, 2988
MvnI	CGCG	1 cut(s)	1302
MwoI	GCNNNNNNNGC	3 cut(s)	572, 2130, 2783
NlaIII	CATG	4 cut(s)	316, 1256, 1970, 2948
NlaIV	GGNNCC	7 cut(s)	29, 74, 160, 1322, 1410, 1906, 2343
NmuCI	GTSAC	4 cut(s)	633, 692, 745, 988
NsiI	ATGCAT	1 cut(s)	1484
OliI	CACNNNNGTG	1 cut(s)	640
PagI	TCATGA	1 cut(s)	2944
PaqCI	CACCTGC	1 cut(s)	2539
PceI	AGGCCT	1 cut(s)	1285
PciSI	GCTCTTC	2 cut(s)	1887, 2016
PctI	GAATGC	3 cut(s)	1114, 1484, 2108
PdmI	GAANNNNTTC	5 cut(s)	66, 1644, 1671, 1874, 2428
PfoI	TCCNGGA	1 cut(s)	459
PleI	GAGTC	3 cut(s)	1216, 1239, 2063
PmaCI	CACGTG	2 cut(s)	692, 773
PmlI	CACGTG	2 cut(s)	692, 773
PpsI	GAGTC	3 cut(s)	1216, 1239, 2063
Ppu21I	YACGTR	3 cut(s)	692, 773, 2086
PpuMI	RGGWCCY	1 cut(s)	1321
PshAI	GACNNNNGTC	1 cut(s)	986
Psp124BI	GAGCTC	1 cut(s)	2028
Psp5II	RGGWCCY	1 cut(s)	1321
Psp6I	CCWGG	4 cut(s)	302, 459, 1661, 2986
PspCI	CACGTG	2 cut(s)	692, 773
PspFI	CCCAGC	1 cut(s)	897
PspGI	CCWGG	4 cut(s)	302, 459, 1661, 2986
PspN4I	GGNNCC	7 cut(s)	29, 74, 160, 1322, 1410, 1906, 2343
PspPI	GGNCC	7 cut(s)	27, 72, 1321, 1408, 2122, 2990, 3035
PspPPI	RGGWCCY	1 cut(s)	1321
PstI	CTGCAG	1 cut(s)	1499
PsuI	RGATCY	3 cut(s)	121, 1618, 1771
RsaI	GTAC	2 cut(s)	1962, 2744
RsaNI	GTAC	2 cut(s)	1961, 2743
RseI	CAYNNNNRTG	2 cut(s)	640, 983
SacI	GAGCTC	1 cut(s)	2028
SapI	GCTCTTC	2 cut(s)	1887, 2016
Sau96I	GGNCC	7 cut(s)	27, 72, 1321, 1408, 2122, 2990, 3035
SchI	GAGTC	3 cut(s)	1217, 1240, 2064
ScrFI	CCNGG	4 cut(s)	304, 461, 1663, 2988
SduI	GDGCHC	7 cut(s)	136, 262, 558, 647, 2028, 2162, 2448
SexAI	ACCWGGT	1 cut(s)	2986
SfaNI	GCATC	6 cut(s)	1405, 1491, 1527, 1942, 2098, 2947
SfcI	CTRYAG	1 cut(s)	1495
SinI	GGWCC	5 cut(s)	27, 72, 1321, 1408, 2990
SmiMI	CAYNNNNRTG	2 cut(s)	640, 983
SmlI	CTYRAG	4 cut(s)	1170, 1201, 1287, 2326
SmoI	CTYRAG	4 cut(s)	1170, 1201, 1287, 2326
SseBI	AGGCCT	1 cut(s)	1285
SsiI	CCGC	7 cut(s)	201, 327, 390, 2131, 2463, 2466, 3007
SspI	AATATT	2 cut(s)	83, 2012
SspMI	CTAG	9 cut(s)	534, 741, 1235, 1325, 1442, 2471, 2658, 2693, 2765
SstI	GAGCTC	1 cut(s)	2028
StuI	AGGCCT	1 cut(s)	1285
StyD4I	CCNGG	4 cut(s)	302, 459, 1661, 2986
StyI	CCWWGG	4 cut(s)	111, 234, 1605, 2413
TaaI	ACNGT	5 cut(s)	583, 639, 1053, 2808, 2928
TaiI	ACGT	4 cut(s)	694, 775, 1535, 2088
TaqI	TCGA	5 cut(s)	130, 442, 475, 668, 2883
TatI	WGTACW	1 cut(s)	1960
TauI	GCSGC	3 cut(s)	330, 2466, 3010
TscAI	CASTG	4 cut(s)	512, 1146, 2121, 2676
TseFI	GTSAC	4 cut(s)	633, 692, 745, 988
TseI	GCWGC	8 cut(s)	44, 1497, 2111, 2777, 2831, 2960, 2963, 3067
Tsp45I	GTSAC	4 cut(s)	633, 692, 745, 988
TspGWI	ACGGA	2 cut(s)	1389, 1611
TspRI	CASTG	4 cut(s)	512, 1146, 2121, 2676
Vha464I	CTTAAG	1 cut(s)	1201
VpaK11BI	GGWCC	5 cut(s)	27, 72, 1321, 1408, 2990
XagI	CCTNNNNNAGG	2 cut(s)	1279, 1558
XbaI	TCTAGA	2 cut(s)	2657, 2764
XcmI	CCANNNNNNNNNTGG	3 cut(s)	310, 512, 2352
XmiI	GTMKAC	3 cut(s)	1472, 1734, 2181
XmnI	GAANNNNTTC	5 cut(s)	66, 1644, 1671, 1874, 2428
XspI	CTAG	9 cut(s)	534, 741, 1235, 1325, 1442, 2471, 2658, 2693, 2765
ZraI	GACGTC	1 cut(s)	1533
Zsp2I	ATGCAT	1 cut(s)	1484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.